prot_Ecto-sp9_F_contig1027.283.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1027.283.1
Unique Nameprot_Ecto-sp9_F_contig1027.283.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ87_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.050e-59
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0
Query:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPPGKERDAKDDA 98
            MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQK AKNMVCQKCLQVGHWTYECKGKATYKARVSRT+ILENPDLKPKFHLDLPPGKE+DAKDDA
Sbjct:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKAAKNMVCQKCLQVGHWTYECKGKATYKARVSRTEILENPDLKPKFHLDLPPGKEKDAKDDA 98          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL3_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 8.020e-25
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVG 51
            MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVG
Sbjct:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVG 51          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVS9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.540e-21
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    3 DAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPPGK-ERDAKDDA 98
            D  PVSRW QR++QR  +YA+S D++  +  KK    KNM CQKCL++GHWTYECK    Y  RVSR+K L+ P L+  F+LDLPP + ER  K++A
Sbjct:    8 DNKPVSRWQQRQEQRRQLYASSKDSLIAIS-KKDAGPKNMQCQKCLKIGHWTYECKASRVYVERVSRSKQLKKPRLQQPFNLDLPPEEAERKEKEEA 103          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FI13_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 8.290e-16
Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQ----GVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPPGKERDAK 95
            MGDA   AP+ +WAQRK+ R  MYATS++ ++    GV       A  M CQKCL+ GHWTYECK  A Y  R SR++ L+NP L+  F+ D PP  + + K
Sbjct:    1 MGDAGGDAPLGKWAQRKEARRNMYATSTEQVRVLRRGVGASAASSAAAM-CQKCLRPGHWTYECKNDAVYVQRPSRSQQLKNPKLRQPFNTDKPPELQDEEK 101          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C528_HYAAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.280e-15
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQGVFR---KKQKEAKNM--VCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPPGKERDA 94
            MGDA   AP+ +WAQRK+ R  MYA+S+D ++   R        A ++  +CQKCL+ GHWTYECK +A Y  R SR++ L+NP L+ +F+ D PP  + D 
Sbjct:    1 MGDANGEAPLGKWAQRKEARRNMYASSTDQVRVHLRGLGASSSAASSIAAMCQKCLRPGHWTYECKNEAVYVHRPSRSQQLKNPKLRQRFNTDKPPELQMDG 102          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G963_PHYPR)

HSP 1 Score: 82.0 bits (201), Expect = 1.970e-15
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQ----GVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPP---GKE 91
            MGDA   AP+  WAQRK+ R  MYATS+D ++    G+       A  M CQKCL+ GHWTYECK +A Y  R SR++ L NP L+  F+ D PP   GKE
Sbjct:    1 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAM-CQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPPELLGKE 100          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VI99_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.270e-15
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNM---VCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPP 88
            MGD    AP+ +WAQRK+ R  MYATS++ ++   R     + ++   +CQKCL+ GHWTYECK +A Y  R SR++ L+NP L+  F++D PP
Sbjct:    1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVRVHRRGLGTSSASITAAMCQKCLRPGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNMDKPP 94          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Zinc (ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y342_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.750e-15
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQ----GVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPP 88
            MGD    AP+ +WAQRK+ R  MYATS++ ++    G+       A  M CQKCL+ GHWTYECK +A Y  R SR++ L+NP L+  F+ D PP
Sbjct:    1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVRVHRRGLGASSASSAAAM-CQKCLRPGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNKDKPP 94          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Kidney (mitochondrial carrier protein 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKB9_PHYNI)

HSP 1 Score: 81.3 bits (199), Expect = 1.140e-14
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQ----GVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPP 88
            MGDA   AP+  WAQRK+ R  MYATS+D ++    G+       A  M CQKCL+ GHWTYECK +A Y  R SR++ L NP L+  F+ D PP
Sbjct:   67 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAM-CQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 160          
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1Q1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.410e-14
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 MGDA---APVSRWAQRKQQREMMYATSSDAIQ----GVFRKKQKEAKNMVCQKCLQVGHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPP 88
            MGDA   AP+  WAQRK+ R  MYATS++ ++    G+       A  M CQKCL+ GHWTYECK +A Y  R SR++ L NP L+  F+ D PP
Sbjct:    1 MGDANGDAPLGLWAQRKEARRNMYATSTEQVRVHRRGLGASSASSAAAM-CQKCLRPGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1027.283.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.050e-5996.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.020e-25100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical2.540e-2152.58protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Uncharacterized8.290e-1647.06protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Uncharacterized1.280e-1545.10protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
Uncharacterized1.970e-1549.50protein n=4 Tax=Phytophthora parasitica TaxID=4792... [more]
Uncharacterized5.270e-1545.74protein n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
Zinc6.750e-1547.37ion binding protein n=1 Tax=Phytophthora palmivora... [more]
Kidney1.140e-1449.47mitochondrial carrier protein 1 n=1 Tax=Phytophtho... [more]
Uncharacterized1.410e-1448.42protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 40..76
e-value: 2.2E-16
score: 59.5
IPR039715Zinc finger CCHC domain-containing protein 10PANTHERPTHR13491ZCCHC10 PROTEINcoord: 15..179
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 31..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1027contigEcto-sp9_F_contig1027:17096..18848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1027.283.1mRNA_Ecto-sp9_F_contig1027.283.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1027 16933..19581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1027.283.1 ID=prot_Ecto-sp9_F_contig1027.283.1|Name=mRNA_Ecto-sp9_F_contig1027.283.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp
MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQV
GHWTYECKGKATYKARVSRTKILENPDLKPKFHLDLPPGKERDAKDDADA
AAAAAGAKGKLGKKRRRRDSSSGSSSSSSSSSSGSDSDSSSSSSSSSSSG
SSSSGSSSDSDSDSDSSSGSSSSGSSSSSGSSGSSSGSHSDSDSDSDSSS
SSSSSEEEDRRARKKHRGSGGAAYSKSSSKKASSSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039715ZCCHC10
IPR036875Znf_CCHC_sf