prot_Ecto-sp9_F_contig1023.255.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1023.255.1
Unique Nameprot_Ecto-sp9_F_contig1023.255.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length143
Homology
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL9_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.050e-71
Identity = 125/146 (85.62%), Postives = 128/146 (87.67%), Query Frame = 0
Query:    1 MLSSCARRVVRLRCAEALPRHLGAAGSTTNCRRPTAGVRARGMMAKAGGKKXXXXXXXXXXXXXS----AGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 142
            MLSS +RRVV LRCAEAL RH+GAAGSTT CRRPTAGV ARGMMAKAG       XXXXXXXXX     AGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKR KE+DYTLDEFRRFVQLDSREKIKRQNRSGKF
Sbjct:    1 MLSSSSRRVVHLRCAEALLRHVGAAGSTTTCRRPTAGVSARGMMAKAGASAASGGXXXXXXXXXXXXXXAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRKKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 146          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS05_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 4.840e-50
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:   65 SAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 142
            SAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF
Sbjct:   29 SAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 106          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Large (subunit ribosomal protein L54, mitochondrial n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SFU4_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 2.770e-13
Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0
Query:   41 RGMMAKAGGKKXXXXXXXXXXXXXSAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLP--SLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            RG+  K GGKK             SA E    VT  N  KDG DP ++PD++YP WLW +  P  +L  L+R   D    DE +R+V+L  R+ I+R N
Sbjct:   15 RGLAPKKGGKKAEDTSSGTATGHLSATE----VTGCNIFKDGSDPPILPDDQYPSWLWELATPGPTLNELERKGPDSLEPDELKRYVKLKRRDSIRRNN 109          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Large (subunit ribosomal protein L54 n=6 Tax=Salvia TaxID=21880 RepID=A0A4D8Y8A9_SALSN)

HSP 1 Score: 70.9 bits (172), Expect = 6.040e-13
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   77 NFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            N LKDG+DP ++PD EYP+WLW++  + P+L+ L+R   +    DE +RFV+LD+R +IK  N
Sbjct:   64 NILKDGQDPKILPDSEYPDWLWHLLDKRPALSELRRKDTETLPFDELKRFVKLDNRARIKENN 126          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MX44_HEVBR)

HSP 1 Score: 69.3 bits (168), Expect = 6.200e-13
Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   71 LGVTPINFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            + V   N LKDG DP ++PD EYP+WLW++  + P+L+ L+R K +    ++ +RFV+LD+R +IK  N
Sbjct:    4 IEVVGANILKDGADPKILPDSEYPDWLWHLLDKRPALSALRREKIETLPYEDLKRFVKLDNRARIKENN 72          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: uncharacterized (protein LOC103718685 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8ZE54_PHODC)

HSP 1 Score: 70.5 bits (171), Expect = 8.500e-13
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 0
Query:   77 NFLKDGKDPSVMPDEEYPEWLWNM---QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            N LKDG DP +MPD +YP+WLW++   +LP L+ L+R   +  TLD+ RRFV+LD+R +IK  N
Sbjct:   64 NILKDGADPKIMPDSDYPDWLWHLLDKRLP-LSELRREGTETLTLDDLRRFVKLDNRARIKENN 126          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VFZ0_9ROSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.110e-12
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   73 VTPINFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            V   N LKDG DP V+PD EYP+WLW++  + P+L+ L+R K +    D+ +RFV+LD+R +IK  N
Sbjct:   87 VVGANILKDGADPKVLPDSEYPDWLWHLLDKRPALSELRRKKIEALPYDDLKRFVKLDNRARIKENN 153          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: 54S (ribosomal protein L37, mitochondrial-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ATG0_NELNU)

HSP 1 Score: 70.1 bits (170), Expect = 1.200e-12
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   73 VTPINFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            V   N LKDG DP ++PD EYP+WLW++  + P+L+ L+R   +    DE +RFV+LD+R +IK  N
Sbjct:   60 VVGANILKDGADPKILPDSEYPDWLWHLLDKKPALSELRRKNIETLPYDELKRFVKLDNRARIKENN 126          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=4 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MBP3_9ASTE)

HSP 1 Score: 70.1 bits (170), Expect = 1.230e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   73 VTPINFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            V   N LKDG DP V+PD EYPEWLW++  + P+L+ L+R   +    +E +RFV+LD+R +IK  N
Sbjct:   61 VVGANILKDGTDPKVLPDSEYPEWLWHLLDKKPALSELRRKDLESLPYEELKRFVKLDNRARIKENN 127          
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P5K2_9ASTR)

HSP 1 Score: 70.1 bits (170), Expect = 1.260e-12
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   73 VTPINFLKDGKDPSVMPDEEYPEWLWNM--QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQN 137
            V   N LKDG DP ++PD EYPEWLW +  + P+L+ L+R K +    ++ +RFV+LD+R +IK  N
Sbjct:   62 VVGANILKDGTDPKILPDSEYPEWLWRLLDKKPALSELRRKKIETLPYEDLKRFVKLDNRARIKENN 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1023.255.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.050e-7185.62protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.840e-50100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Large2.770e-1339.39subunit ribosomal protein L54, mitochondrial n=1 T... [more]
Large6.040e-1347.62subunit ribosomal protein L54 n=6 Tax=Salvia TaxID... [more]
Uncharacterized6.200e-1343.48protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepI... [more]
uncharacterized8.500e-1351.56protein LOC103718685 n=1 Tax=Phoenix dactylifera T... [more]
Uncharacterized1.110e-1247.76protein n=1 Tax=Morella rubra TaxID=262757 RepID=A... [more]
54S1.200e-1246.27ribosomal protein L37, mitochondrial-like n=1 Tax=... [more]
Uncharacterized1.230e-1247.76protein n=4 Tax=Cuscuta sect. Cleistogrammica TaxI... [more]
Uncharacterized1.260e-1246.27protein n=1 Tax=Mikania micrantha TaxID=192012 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 68..100
e-value: 5.2E-9
score: 36.7
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR28595FAMILY NOT NAMEDcoord: 29..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1023contigEcto-sp9_F_contig1023:13083..15764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1023.255.1mRNA_Ecto-sp9_F_contig1023.255.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1023 11926..15834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1023.255.1 ID=prot_Ecto-sp9_F_contig1023.255.1|Name=mRNA_Ecto-sp9_F_contig1023.255.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=143bp
MLSSCARRVVRLRCAEALPRHLGAAGSTTNCRRPTAGVRARGMMAKAGGK
KGGKGGGGGDSAKDSAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNM
QLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013870Ribosomal_L37_mit