prot_Ecto-sp9_F_contig10222.247.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10222.247.1
Unique Nameprot_Ecto-sp9_F_contig10222.247.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10222.247.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI0_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.170e-32
Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 0 
Query:    1 MVIIVSGAVWAGITVTKIVISKVLVWKAFERCKRPDENREYETNSSDKEARHDGQDVPELDQGVDDDEGEERQPVISAT 79
            MVIIVSGAVWAGI VTK VISKVLVWKA ERC RPDENRE++TNSSD+EAR DG+DVPEL Q VDD+E E++QPVI AT
Sbjct:    1 MVIIVSGAVWAGIMVTKCVISKVLVWKALERCVRPDENREHKTNSSDEEARDDGEDVPELAQEVDDEEEEDQQPVIGAT 79
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10222.247.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized3.170e-3279.75protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10222contigEcto-sp9_F_contig10222:3030..3778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10222.247.1mRNA_Ecto-sp9_F_contig10222.247.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10222 3017..3778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10222.247.1 ID=prot_Ecto-sp9_F_contig10222.247.1|Name=mRNA_Ecto-sp9_F_contig10222.247.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=80bp
MVIIVSGAVWAGITVTKIVISKVLVWKAFERCKRPDENREYETNSSDKEA
RHDGQDVPELDQGVDDDEGEERQPVISATN
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