prot_Ecto-sp9_F_contig10191.223.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10191.223.1
Unique Nameprot_Ecto-sp9_F_contig10191.223.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length490
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10191.223.1 vs.
Match: Methyltranfer_dom (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ3_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.240e-102
Identity = 303/441 (68.71%), Postives = 305/441 (69.16%), Query Frame = 0 
Query:   54 IRPVVDWLGAPDPEAQQQQQRREGAPSYSGARNEAKARPSPSSHPXXXXXXXXXXXXXXX----ASVRLTINSSGLDRKSGRDRIAAATTAGFPDDAGGLSLRRAAREEVAAAGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREERGKIVCKQGDLLWKSVVGNLAKSASWFVEEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQAMRAEGAPPAFRHLRALCNYPEDRFSAWLERIVLDADVSSSPATAFSAASPPRPRPGRRLGGDADDRPTSSLSTTSLAELGITYAAATRNASRRQXXXXXXXXXXXXXXXRVAFFFAPGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGAR 490
            IRPVVDWLGAPDPEAQ                             XXXXXXXXXXXXXXX    ASVR T N SGLDRKSGRDRIAAATTAGFPDDAG L+LRRAAREEVAA GQGA                     XXXXXX GREER KIVCKQGDLLWKSVVGNLAKSASWFVEEVG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                           AMRA GAPPAFRHLRALCNYPEDRFSAWLERIVLDAD SSSPATA SA SP RPRPGRRLGGDADD PTSSLSTTSLAELG+TYAAAT NA RRQXXXXXXXXXXXXXXX     FAPGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGAR
Sbjct:  309 IRPVVDWLGAPDPEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVRQTTNPSGLDRKSGRDRIAAATTAGFPDDAGELTLRRAAREEVAAVGQGAGPEPQRAEPTLAVPVYTEGVGXXXXXXFGREERRKIVCKQGDLLWKSVVGNLAKSASWFVEEVGLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------AMRAAGAPPAFRHLRALCNYPEDRFSAWLERIVLDADDSSSPATASSAVSPSRPRPGRRLGGDADDPPTSSLSTTSLAELGLTYAAATMNAPRRQXXXXXXXXXXXXXXXXXXXXFAPGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGAR 690
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10191.223.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Methyltranfer_dom1.240e-10268.71domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 274..306
e-value: 1.1
score: 18.3
coord: 237..269
e-value: 5.8E-5
score: 32.5
coord: 1..31
e-value: 180.0
score: 9.6
coord: 36..64
e-value: 140.0
score: 10.4
coord: 311..342
e-value: 3.4
score: 16.6
coord: 200..232
e-value: 2200.0
score: 1.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 192..341
e-value: 2.2E-14
score: 53.1
NoneNo IPR availableGENE3D3.40.50.150coord: 435..490
e-value: 1.2E-7
score: 33.3
NoneNo IPR availablePANTHERPTHR13068:SF36TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTICcoord: 264..340
NoneNo IPR availablePANTHERPTHR13068:SF36TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTICcoord: 195..268
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 195..268
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 264..340
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..71
e-value: 4.1E-6
score: 28.2
coord: 188..362
e-value: 2.1E-23
score: 84.8
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 450..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10191contigEcto-sp9_F_contig10191:626..4675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10191.223.1mRNA_Ecto-sp9_F_contig10191.223.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10191 611..4675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10191.223.1 ID=prot_Ecto-sp9_F_contig10191.223.1|Name=mRNA_Ecto-sp9_F_contig10191.223.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=490bp
MVRRQPGLLSLGVSGNVLKVTEFFKKEMGLKADQISKIYCSNPHVLYLSL
DKNIRPVVDWLGAPDPEAQQQQQRREGAPSYSGARNEAKARPSPSSHPPP
VTAATSGGGGGSSASVRLTINSSGLDRKSGRDRIAAATTAGFPDDAGGLS
LRRAAREEVAAAGQGAGPEPQRAELTLEVPVYTEGFGWDWGLGLGREERG
KIVCKQGDLLWKSVVGNLAKSASWFVEEVGLSWDEMRKVVERSPSLLCLS
AEHNLEPKLAFLVNELGLDPGSVRKTIVNQPSLMTLSVTGNLRPKAAFFR
DELGANERDIADLLNQCPRVMNASVEGRILPRMQAMRAEGAPPAFRHLRA
LCNYPEDRFSAWLERIVLDADVSSSPATAFSAASPPRPRPGRRLGGDADD
RPTSSLSTTSLAELGITYAAATRNASRRQQREAAGAATGAAEEQRVAFFF
APGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf
IPR029063SAM-dependent_MTases