prot_Ecto-sp9_F_contig10179.210.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10179.210.1
Unique Nameprot_Ecto-sp9_F_contig10179.210.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length407
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10179.210.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 1.740e-157
Identity = 299/344 (86.92%), Postives = 305/344 (88.66%), Query Frame = 0 
Query:    1 MLNKGTPLGDGDAASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVAASMTRDEDRLEALQAAIGHAITAAGSLDDEEQEHDEQHPENRPQSLLTLLPLPSLAAESTADNNNQDPATKAGGRAEVEEEIEEGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELLTELLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTAAEAFAEAGVGGGNMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGGGGSTSGHGGAPAAVAGERDAGMFVGAGLVGXXXXXXXXESVFVKDARE 344
            MLNKGTPLGDGD ASP GPVPTFS LQPWLEKIKNPALACTTAQRVAASMTRDEDRLEAL AAIGHAITAAGSLDDE+Q  DEQ PEN P+SLLTLLPLPSLAAESTA NNNQDP TKAGGR EVEEE+EEGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELLTELLV                   XXXXXXXXXXXXXXXXXXXXXXXX  TAAEAFA AGVGGGNMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGG GSTSGHGG PA+VAGERDA +FVGAGLVG XXXXX  +SVFVKDARE
Sbjct:  728 MLNKGTPLGDGDGASPNGPVPTFSDLQPWLEKIKNPALACTTAQRVAASMTRDEDRLEALHAAIGHAITAAGSLDDEDQGQDEQQPENSPRSLLTLLPLPSLAAESTA-NNNQDPTTKAGGRGEVEEEMEEGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELLTELLVVAAEGAADAALALPPTSGEXXXXXXXXXXXXXXXXXXXXXXXXX-TAAEAFAVAGVGGGNMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGGAGSTSGHGGGPASVAGERDAVIFVGAGLVGGXXXXX--DSVFVKDARE 1067
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BLAST of mRNA_Ecto-sp9_F_contig10179.210.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 1.860e-148
Identity = 298/409 (72.86%), Postives = 299/409 (73.11%), Query Frame = 0 
Query:    1 MLNKGTPLGDGDAASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVAASMTRDEDRLEALQAAIGHAITAAGSLDDEEQEHDEQHPENRPQSLLTLLPLPSLAAESTADNNNQDPATKAGGRAEVEEEIEEGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELLTELLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTAAEAFAEAGVGGG-NMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGGGGSTSGHGGAPAAVAGERDAGMFVGAGLVGXXXXXXXX-ESVFVKDAREERMLEDATLALRAAFVLTVTFSDDAVDGDTSVCDSIAFMDLKSRISVLLSIAKDGRRDGRSNR 407
            ML+KGTPLGDG  ASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVAASMTRDEDRLEALQAAIGHAITAAGSLDDEE                                                    EGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELL ELLV                                  XXXXXXXXX                 NMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGG GSTSGHGGAPAAVAGERDAGMFVGAGLVG XXXXXXX ESVFVK AREERMLEDATLALRAAFVLTVTFSDDAVDGDTSVCDSIAFMDLKSRISVLLSIAKDGRRDGRSNR
Sbjct: 2166 MLDKGTPLGDGGGASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVAASMTRDEDRLEALQAAIGHAITAAGSLDDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGEVEAEVVVDRLQRRALRLEHLMTAKACVGADMAERLSPFLLSGSTELLAELLVVAAKGAADAALALPPTSGEGRHTHSAATEWMATTXXXXXXXXXXXXXXXXXXXXXXXXXXNMSDFRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGGAGSTSGHGGAPAAVAGERDAGMFVGAGLVGGXXXXXXXXESVFVKGAREERMLEDATLALRAAFVLTVTFSDDAVDGDTSVCDSIAFMDLKSRISVLLSIAKDGRRDGRSNR 2574
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10179.210.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.740e-15786.92protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.860e-14872.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10179contigEcto-sp9_F_contig10179:226..4219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10179.210.1mRNA_Ecto-sp9_F_contig10179.210.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10179 197..4219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10179.210.1 ID=prot_Ecto-sp9_F_contig10179.210.1|Name=mRNA_Ecto-sp9_F_contig10179.210.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=407bp
MLNKGTPLGDGDAASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVAASM
TRDEDRLEALQAAIGHAITAAGSLDDEEQEHDEQHPENRPQSLLTLLPLP
SLAAESTADNNNQDPATKAGGRAEVEEEIEEGGGEVEAEVVVDRLQRRAL
RLEHLMTAKACVGADMAERLSPFLLSGSTELLTELLVVAAESAADAALAL
PPTAGEGGHHHSAATEWMATTTTTTGGSSSISTAAEAFAEAGVGGGNMSD
FRRRATGALQAARSVADQRGMDPHDVETIIFRLAKNWICQHKLGGGGGST
SGHGGAPAAVAGERDAGMFVGAGLVGGGGGGGGGESVFVKDAREERMLED
ATLALRAAFVLTVTFSDDAVDGDTSVCDSIAFMDLKSRISVLLSIAKDGR
RDGRSNR
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