prot_Ecto-sp9_F_contig1017.203.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1017.203.1
Unique Nameprot_Ecto-sp9_F_contig1017.203.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length482
Homology
BLAST of mRNA_Ecto-sp9_F_contig1017.203.1 vs.
Match: CH_2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY5_9PHAE)

HSP 1 Score: 663 bits (1710), Expect = 2.780e-223
Identity = 394/519 (75.92%), Postives = 405/519 (78.03%), Query Frame = 0
Query:    1 MNQTDDPATVAVARKSSSNPQPPVVTDNAEVKSPAPPSTPAPGKAADSGSEDLDDMPDFGDDDADAMLEEMASFPSVQFADSTLPGTTSSAGPLISSGSEDDKSPDHPERKPLQKFKSLVHFMAPTSLVREYSGLLDDLDSDASNGSSEEKEQTPPKXXXXXXXXXXXXPAKEQAXXXXXXXXXXXXXXXXXXXEVSPGASAGGGKAAGAKGLKLTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGGVVPIQTPGPTEATPPRDLAGPSHGVPATKDPYNDNRALQKSSQSTKQSTPTKLRPADRTDKQLVSSNVRETVTTTGXXXXXXXTPGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHKIANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSLPHEDVRCLCTV-------------------------------------PMPAEEGVEASSRVLAGLYAFLFADGLVPPLAGIAPAHLRAPRARQEYATGY 482
            MN TDDPATVAV RKSSSN QPP+VT NAEV SPA           DSGSEDLDDMPDFG  DADAMLEEMASFP VQ   STLPGTTSSAGPLISSG  DDK PD PERKP+Q FKSLVHF AP+S+VREYSGLLDDLDSDASNGSSE KE+ P K         X  PAKEQ XXXXXXXXXXXXXXXXXXX              G KGLK TLELEVDAASLSGDLGKYAGTSWRLTSPRVEGG VPI+T GPTEATPPRDLAGPSHGVPATKDPYNDNRALQKS QST+QSTPTKLR  DR DKQ VSSNVR+T TTTG    XX TPGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHK+ANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSL  EDV+CLCTV                                     PMPAEEGVEA+SRVLAGLYAFL ADGLVPPLAGIAPAHLRAP ARQEY TGY
Sbjct:    1 MNYTDDPATVAVGRKSSSNSQPPIVTGNAEVTSPAXXXXXXXXXXXDSGSEDLDDMPDFGHGDADAMLEEMASFPPVQLTGSTLPGTTSSAGPLISSG--DDKIPDRPERKPIQNFKSLVHFQAPSSVVREYSGLLDDLDSDASNGSSEGKEKMPSKTPPEEPEPSXPPPAKEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-KGLKFTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGGAVPIRTMGPTEATPPRDLAGPSHGVPATKDPYNDNRALQKSPQSTQQSTPTKLRQEDRADKQPVSSNVRQTATTTGATATXXTTPGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHKMANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSLRREDVQCLCTVSKRGRGAKWIEIQAANRYSRFTLRFVLNCCQETPHNVPMPAEEGVEAASRVLAGLYAFLLADGLVPPLAGIAPAHLRAPPARQEYTTGY 516          
BLAST of mRNA_Ecto-sp9_F_contig1017.203.1 vs.
Match: Calponin-homology ((CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP5_ECTSI)

HSP 1 Score: 612 bits (1579), Expect = 3.460e-205
Identity = 355/379 (93.67%), Postives = 361/379 (95.25%), Query Frame = 0
Query:   99 SEDDKSPDHPERKPLQKFKSLVHFMAPTSLVREYSGLLDDLDSDASNGSSEEKEQTPPKXXXXXXXXXXXXPAKEQAXXXXXXXXXXXXXXXXXXXEVSPGASAGGGKAAGAKGLKLTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGGVVPIQTPGPTEATPPRDLAGPSHGVPATKDPYNDNRALQKSSQSTKQSTPTKLRPADRTDKQLVSSNVRETVTTTGXXXXXXXTPGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHKIANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSLPHEDVRCLCTVPMPAEEGVEASSRVLAGLYAFLFADGLVPPLAGIAPAHLRAPRARQE 477
            SEDDKSPDHPERKP+QKFKSLV FMAP+SLVREYSGLLDDLDSDASNGSSEE EQTPPKXXXXXXX XXXXPAKEQ XXXXXXXXXXXXXXXXXXXEVSPGASAGGGKA G KGLKLTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGG VPIQTPGPTEATPPRD AGPSHGVPATKDPYNDNRALQKS QST+QSTPTK RPADRTDKQLVSSNVRET     XXXXXXX PGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHKIANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSLPHEDVRCLCTVPMPAEEGVEA+SRVLAGLYAFL ADGLVPPLAGIAPAHLRAP AR++
Sbjct:   10 SEDDKSPDHPERKPMQKFKSLVRFMAPSSLVREYSGLLDDLDSDASNGSSEETEQTPPKXXXXXXXPXXXXPAKEQXXXXXXXXXXXXXXXXXXXXEVSPGASAGGGKAGGGKGLKLTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGGGVPIQTPGPTEATPPRDPAGPSHGVPATKDPYNDNRALQKSPQSTQQSTPTKPRPADRTDKQLVSSNVRETTXXXXXXXXXXXXPGVASPTDEQAKKLLRWFRSHFDRREIDCDFKLRHKIANGYLVGACLAHYHPRKIDSVDFNRGNSPANKAANWEFVQKFLGRRSYSLPHEDVRCLCTVPMPAEEGVEAASRVLAGLYAFLLADGLVPPLAGIAPAHLRAPPARRK 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1017.203.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
CH_22.780e-22375.92domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Calponin-homology3.460e-20593.67(CH) domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010441CH-like domain in sperm proteinPFAMPF06294CH_2coord: 364..428
e-value: 2.2E-10
score: 40.5
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 339..452
e-value: 1.9E-13
score: 52.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 340..457
score: 10.328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1017contigEcto-sp9_F_contig1017:12383..16672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1017.203.1mRNA_Ecto-sp9_F_contig1017.203.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1017 12383..16672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1017.203.1 ID=prot_Ecto-sp9_F_contig1017.203.1|Name=mRNA_Ecto-sp9_F_contig1017.203.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=482bp
MNQTDDPATVAVARKSSSNPQPPVVTDNAEVKSPAPPSTPAPGKAADSGS
EDLDDMPDFGDDDADAMLEEMASFPSVQFADSTLPGTTSSAGPLISSGSE
DDKSPDHPERKPLQKFKSLVHFMAPTSLVREYSGLLDDLDSDASNGSSEE
KEQTPPKTPPEEPEPSPPPPAKEQAPPAEEKPLSTEKKPQPTEEEVSPGA
SAGGGKAAGAKGLKLTLELEVDAASLSGDLGKYAGTSWRLTSPRVEGGVV
PIQTPGPTEATPPRDLAGPSHGVPATKDPYNDNRALQKSSQSTKQSTPTK
LRPADRTDKQLVSSNVRETVTTTGTTATTTTTPGVASPTDEQAKKLLRWF
RSHFDRREIDCDFKLRHKIANGYLVGACLAHYHPRKIDSVDFNRGNSPAN
KAANWEFVQKFLGRRSYSLPHEDVRCLCTVPMPAEEGVEASSRVLAGLYA
FLFADGLVPPLAGIAPAHLRAPRARQEYATGY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010441CH_2
IPR036872CH_dom_sf
IPR001715CH-domain