prot_Ecto-sp9_F_contig1015.185.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1015.185.1
Unique Nameprot_Ecto-sp9_F_contig1015.185.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length355
Homology
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 5.570e-184
Identity = 283/306 (92.48%), Postives = 287/306 (93.79%), Query Frame = 0
Query:   49 MHDQLSSRGGVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKADFAELLSEERSGRCIEELSMDLMRRSFMIRKRVAPGYAAGGLADEEGGGPPVPPDMPAALQTTNKLSPAFAKKAKQVAKQAMKRQRPSSDNEEGEMASASGYSSSASAAAPLSQDAKSLVKPLISRLVAMKWPSGWGNPFMTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQGGGVSGSGGGQDKKQRVR 354
            MHDQ SSRGGVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKA FAELLSEERSGR IEELSMDLMRRSFMIRKRVAPG AAGGLA        VPPDMPAALQTTNKLSPAFA+KAKQVAKQAMKRQRPSSDN EGEMASASGYSSSASAAAPLSQ+AKSLVKPLISRLVAMKWPSGWGNPF TVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFAL+LQEAFR ELS+IKRNLED AQQ GGVSGS G QDKKQRVR
Sbjct:    1 MHDQSSSRGGVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRRIEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXXVPPDMPAALQTTNKLSPAFARKAKQVAKQAMKRQRPSSDNGEGEMASASGYSSSASAAAPLSQEAKSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALQLQEAFRRELSVIKRNLEDLAQQRGGVSGSEGVQDKKQRVR 306          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromodomain-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA18_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.720e-22
Identity = 83/253 (32.81%), Postives = 114/253 (45.06%), Query Frame = 0
Query:   82 ISHFLSPQLQVLIKEKPRIALAEKADFAELLSEERSG---RCIEELSMDLMRRSFMIRKRVAPGYAAGGLADEEGGGPPVPPDMPAALQ-TTNKLSPAFAKKAKQVAKQAMKRQRPSSDNEEGEMASASGYSSSASAAAPLSQDAKSLVKPLISRLVAMKWPSGWGNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLI 326
            ++HFL P L  L++ K R+  AEKA+FAELL+ E      R     +   MRRSF IR+R               GG P P  +  ++   T    P  A++ ++ A+              GEM                  D    + PL  RL  M +   WGNPF  V     A     P YF F+K PMNLT++RD L   +Y  +A+  AD+ L+  NA  +NRP DPVY FA  L +    EL+ +
Sbjct:   70 MAHFLPPALLPLLRAKWRVVQAEKANFAELLASEPPAPQPRKKVPFTEAAMRRSFFIRRRE--------------GGAPSPATVGGSMPFPTTGGRPITARRLRRPARIT------------GEMTP---------------DDVSDALTPLHQRLTRMSFGKAWGNPFTQVITPETAAALRVPNYFNFVKEPMNLTWMRDKLRGAEYAAIADYVADIALVRANAQRYNRPGDPVYGFADTLYDVCAQELAQL 281          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.290e-18
Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 0
Query:  213 SAAAPLSQDAKSLVKPLISRLVAMKWPSGWGNPFMTVFKKSNAPP----RYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQ 333
            SA  P +   + +++P+++ L  M +   WGNPF TV  + N        YF+FI+RPMNLT+I++ +N  KY+++ E+  D+EL+V NA  +NRP++ VY FA  L+E +   +S I   + D+
Sbjct:  217 SAPLPRADQVQKVLRPVVNSLWKMNFGGQWGNPFRTVIDQENCVALGVANYFDFIERPMNLTWIKEKMNSKKYSSLGELTDDVELMVQNAHKYNRPNEEVYIFATTLREKYYKIISSISEQVLDE 341          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ4_HYAAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.050e-16
Identity = 42/118 (35.59%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  225 LVKPLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLED 332
            L+ PL++ L A+ W +GW      GNPF+  F K N      P YF+++K PM+LT +++ + + +YT + +   D++L+  NA AFNR  +PV+Q A+E++  + S+LS  K+  ++
Sbjct:  145 LLAPLVAELRALTW-AGWVVSGKAGNPFLQKFTKDNCKRLGVPNYFDYVKTPMDLTRMKEKVERAEYTKIEQFTTDIKLMAANAKAFNRVGEPVHQMAIEIERLYESKLSAYKKMFDE 261          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1N2_GLOUD)

HSP 1 Score: 84.0 bits (206), Expect = 1.260e-14
Identity = 43/122 (35.25%), Postives = 73/122 (59.84%), Query Frame = 0
Query:  225 LVKPLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQ 336
            L+ PL++ L  + W  GW      GNPF+    + N      P YF+F+K PM+LT +++ + K +Y  + +  +D++L+V NA  FNR  +PV+Q A+EL++ + S+L+  K  L+D  Q+
Sbjct:  172 LLAPLVTELRGLTW-VGWIVNGKAGNPFIQKITRENCKRLGVPNYFDFVKEPMDLTRMKEKVEKAEYVRIDQFTSDIKLMVANAKTFNRVGEPVHQMAIELEQLYVSKLAGYKTTLDDLQQE 292          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.370e-14
Identity = 40/122 (32.79%), Postives = 73/122 (59.84%), Query Frame = 0
Query:  225 LVKPLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQ 336
            L+ PL++ L  + W +GW      GNPF+  F K N      P YF+++K PM+LT +++ + + +Y+ + +   D++L+  NA  FNR  +PV+Q A+E+++ + S+L   K+  +D  Q+
Sbjct:  154 LLAPLVTELRGLTW-AGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKIDQFTTDIKLMAANAKTFNRVGEPVHQMAIEIEQLYESKLPGYKKMFDDLQQE 274          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.680e-14
Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  223 KSLVKPLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQ 336
            ++L+ PL++ L  + W +GW       NPF+    + N      P YF+++K PM+LT +++ + K +Y  V +  +D++L+V NA  FNR  +PV+Q A+EL++ + S+L   +  LED  Q+
Sbjct:  168 QTLLAPLVTELRGLTW-AGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARVEQFTSDIKLMVANAKTFNREGEPVFQMAIELEQLYESKLVGYRATLEDLQQE 290          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJB1_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 1.190e-13
Identity = 35/107 (32.71%), Postives = 68/107 (63.55%), Query Frame = 0
Query:  225 LVKPLISRLVAMKWPSGWGNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIK 327
            ++KP+   L+A +W   WGNPF  V  + N      P YF+ I+ PMNL +I+  ++K+KY T  + +AD++L++ NA+ +NR  +PV+  A  +++ ++ +++ ++
Sbjct:   44 VLKPITEILLAKEWKK-WGNPFTAVITRENCHKMDVPDYFDVIQTPMNLKWIKAKVDKHKYLTFQQFDADIDLMLENAMTYNREGEPVFAMAKVIRDVYKQKVADLQ 149          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL)

HSP 1 Score: 79.7 bits (195), Expect = 3.780e-13
Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 0
Query:  220 QDAKSLVK---PLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQ 336
            +DA+ L K   PLI+ L ++ W SGW      GNPF+    K N      P YF+F++ PM+LT I++ + K +Y+ + +   D++L+V NA  FNR  +PV+Q A EL++ + S++       E+  Q+
Sbjct:  164 EDAQMLQKVLAPLITELRSLTW-SGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRIDQFTVDIKLMVHNAKTFNRVGEPVHQMAGELEQLYESKVVAYGATFEELQQE 292          
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Match: Bromo (domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE1_PYTIN)

HSP 1 Score: 76.6 bits (187), Expect = 4.310e-12
Identity = 41/117 (35.04%), Postives = 70/117 (59.83%), Query Frame = 0
Query:  220 QDAKSLVK---PLISRLVAMKWPSGW------GNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALELQEAFRSEL 323
            +DA+ L K   PLI+ L  + W S W      GNPF+    K N      P YF+F+  PM+LT +++ + K +Y ++ +  +D++L+V NA  FNR  +PV+Q A+EL++ + +++
Sbjct:  163 EDAQMLQKVLVPLIAELRGLTW-SAWIVSGKPGNPFLQKITKENCRRLGVPNYFDFVAEPMDLTRVKEKVEKAEYYSIQQFTSDIKLMVQNAKTFNRVGEPVHQMAIELEQLYEAKV 278          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1015.185.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Bromo5.570e-18492.48domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Bromodomain-containing4.720e-2232.81protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical6.290e-1837.60protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Bromo2.050e-1635.59domain-containing protein n=1 Tax=Hyaloperonospora... [more]
Bromo1.260e-1435.25domain-containing protein n=1 Tax=Globisporangium ... [more]
Bromo1.370e-1432.79domain-containing protein n=2 Tax=Phytophthora ker... [more]
Bromo1.680e-1433.87domain-containing protein n=1 Tax=Pythium brassicu... [more]
Hypothetical1.190e-1332.71protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized3.780e-1335.38protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Bromo4.310e-1235.04domain-containing protein n=2 Tax=Pythium insidios... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 256..272
score: 42.33
coord: 272..290
score: 28.38
coord: 290..309
score: 33.48
IPR001487BromodomainSMARTSM00297bromo_6coord: 215..328
e-value: 2.1E-14
score: 63.9
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 246..312
e-value: 1.6E-15
score: 57.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 245..309
score: 15.176
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 174..337
e-value: 5.3E-25
score: 89.8
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 222..329
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 252..347
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 252..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1015contigEcto-sp9_F_contig1015:11843..14654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1015.185.1mRNA_Ecto-sp9_F_contig1015.185.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1015 11843..14654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1015.185.1 ID=prot_Ecto-sp9_F_contig1015.185.1|Name=mRNA_Ecto-sp9_F_contig1015.185.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=355bp
MARTRRTYYRTQPSPCLFKARRLARATMAESQQGTSAGVLHLLTPGIAMH
DQLSSRGGVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRI
ALAEKADFAELLSEERSGRCIEELSMDLMRRSFMIRKRVAPGYAAGGLAD
EEGGGPPVPPDMPAALQTTNKLSPAFAKKAKQVAKQAMKRQRPSSDNEEG
EMASASGYSSSASAAAPLSQDAKSLVKPLISRLVAMKWPSGWGNPFMTVF
KKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALA
FNRPSDPVYQFALELQEAFRSELSLIKRNLEDQAQQGGGVSGSGGGQDKK
QRVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf