prot_Ecto-sp9_F_contig1013.166.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1013.166.1
Unique Nameprot_Ecto-sp9_F_contig1013.166.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length226
Homology
BLAST of mRNA_Ecto-sp9_F_contig1013.166.1 vs.
Match: PRA1 (family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX3_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 1.350e-152
Identity = 221/225 (98.22%), Postives = 222/225 (98.67%), Query Frame = 0
Query:    1 MPEPQLRRRPVGSGSRGSAPPRPNAANQNQAVALAVLSELGAMMELFFKGLRLKEMKGWGEFFARFKAPRAWKTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQAGFTIENAQNFVENVFGITGSRSQ 225
            MPEPQLRRRPVGSGSRGSAPPRPN ANQNQAVALAVLSELGAMMELFFKGLRLKEMKGWGEFFARFKAPRAW TKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQAGFTIENAQNF EN+FGITGSRSQ
Sbjct:    1 MPEPQLRRRPVGSGSRGSAPPRPNVANQNQAVALAVLSELGAMMELFFKGLRLKEMKGWGEFFARFKAPRAWNTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQAGFTIENAQNFAENIFGITGSRSQ 225          
BLAST of mRNA_Ecto-sp9_F_contig1013.166.1 vs.
Match: PRA1 (family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.100e-34
Identity = 72/154 (46.75%), Postives = 92/154 (59.74%), Query Frame = 0
Query:   49 KGLRLKEMKGWGEFFARFKAPRAWKTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQA 202
            + L  + M+ WGEFF +FK PRAW  +VLDER+TTN LHYRGNY  V  G ++V I+S+P +LL       LL FLFPT    RAV V  R +   ER   A++    +L  TGA   LL+  G     CL H VFRPR++ SK +R   EA+A
Sbjct:   40 QSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 193          
BLAST of mRNA_Ecto-sp9_F_contig1013.166.1 vs.
Match: PRA1 (family protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.990e-30
Identity = 68/162 (41.98%), Postives = 89/162 (54.94%), Query Frame = 0
Query:   49 KGLRLKEMKGWGEFFARFKAPRAWKTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQAGFTIENAQ 210
            K   LK M+ WGEFFARFK P+ W    L++R+ TN+LHYRGNY  V   + ++ ++  P + L L  C      L P     R VRVG R L R E L  A IG+  +L  +G  Y LL     G  +C+ H V RPR++GSKT+R   EA+ GF     Q
Sbjct:   21 KQFGLKSMQPWGEFFARFKPPKRWDQTSLEQRINTNYLHYRGNYLFVMVAVTLLHVVLAPVMALVLAVCVCGFILLAPPSG--REVRVGQRLLSRNEGLVLASIGSLALLLWSGTLYRLLMVLSLGFAVCVAHMVLRPRTLGSKTNRFMEEAKVGFAQAQQQ 180          
BLAST of mRNA_Ecto-sp9_F_contig1013.166.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWI0_9ARCH)

HSP 1 Score: 82.4 bits (202), Expect = 1.550e-15
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   54 KEMKGWGEFFARFKAPRAWKTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYIL---LFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQA-GFTI 206
            KEMK W EFFA FK P+ + ++ L++R+TTNFLHYR NY  ++ G+L++ I++NP ++L+ +    + T++      R+   +GD + +   +       ++ IL  TG    L   LFY    +L+C +H + RPRS+ SK +R   E +  G+++
Sbjct:   31 KEMKPWSEFFATFKPPQ-FDSRHLEQRITTNFLHYRSNYLAISLGILILQILTNPVIILSSVAIFGICTYVLQVH--RKPFIIGDFSFDGVGKQYLCAGLSAIILFATGTVVKLCWCLFYI---ILVCGIHMLLRPRSVSSKANRMYEEMKLKGYSV 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1013.166.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
PRA11.350e-15298.22family protein n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
PRA15.100e-3446.75family protein n=1 Tax=Tribonema minus TaxID=30337... [more]
PRA14.990e-3041.98family protein n=2 Tax=Fibrocapsa japonica TaxID=9... [more]
Uncharacterized1.550e-1534.39protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 52..193
e-value: 3.6E-28
score: 98.0
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 54..192
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 54..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..48
NoneNo IPR availableTMHMMTMhelixcoord: 94..125
NoneNo IPR availableTMHMMTMhelixcoord: 162..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1013contigEcto-sp9_F_contig1013:5659..9452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1013.166.1mRNA_Ecto-sp9_F_contig1013.166.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1013 5639..10659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1013.166.1 ID=prot_Ecto-sp9_F_contig1013.166.1|Name=mRNA_Ecto-sp9_F_contig1013.166.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=226bp
MPEPQLRRRPVGSGSRGSAPPRPNAANQNQAVALAVLSELGAMMELFFKG
LRLKEMKGWGEFFARFKAPRAWKTKVLDERLTTNFLHYRGNYSVVAAGLL
VVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAA
VIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEA
QAGFTIENAQNFVENVFGITGSRSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1