prot_Ecto-sp9_F_contig1012.160.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1012.160.1
Unique Nameprot_Ecto-sp9_F_contig1012.160.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length327
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1012.160.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ8_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.530e-118
Identity = 274/330 (83.03%), Postives = 274/330 (83.03%), Query Frame = 0 
Query:    1 MEMACPAETNRALGMRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGGGGQACGGGSPQGEAAADFGTTSDQAGESCRPKDGGDEGGG-DADASSTAGWAAAXXXXXXXXXXXXTTLFASPARPRSA-MSVLSTSVLAVSRPGSPTAAAAPPTVAGEGGXXXXXXXXXXXXA-KQRKSGDRTGL-SFWRWGGKPRTGDEGGSXXXXXSAGVEEGCGGWGTGMVRVPSFEPPVKGSGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVAAAXXXXXXXXXXXXXXXXXXXXXXXXSSGRKRSVDGEVGGTLGKKGGGGVVNPGKE 326
            MEMACPAETNRALGMRPMDVAKLSNFDPSGKATLILACAKAAWARRGVG GGQA GGGSPQGEAAADFGTTSDQAGESCRPKDGGDEGGG DADASSTAGWAA XXXXXXX     TTLFASPARPRS  MSVLSTSVLAVSRPGSPTAA           XXXXXXXXXX  A KQR SGDRT L SFWRWGGKPRTGDEGGSXXXXX AGVEEGCGGWGTGMVRVPSFEP VKGSGANXXXXXXXXXXXXXXXXXXXXXXXXXX    TPVAA XXX                     SSGRKRSVDGEVGGTLGKKGGGGVVNPGKE
Sbjct:    1 MEMACPAETNRALGMRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGAGGQARGGGSPQGEAAADFGTTSDQAGESCRPKDGGDEGGGGDADASSTAGWAAXXXXXXXXPASPATTLFASPARPRSGTMSVLSTSVLAVSRPGSPTAAXXXXXXXXXXXXXXXXXXXXXEGAAKQRISGDRTALLSFWRWGGKPRTGDEGGSXXXXXXAGVEEGCGGWGTGMVRVPSFEPSVKGSGANXXXXXXXXXXXXXXXXXXXXXXXXXXPAFETPVAAXXXXSASNSGECLGGGSSSR-----SSGRKRSVDGEVGGTLGKKGGGGVVNPGKE 325
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BLAST of mRNA_Ecto-sp9_F_contig1012.160.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU0_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 2.690e-93
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0 
Query:    1 MEMACPAETNRALGMRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGGGGQACGGGSPQGEAAADFGTTSDQAGESCRPKDGGDEGGGDADASSTAGWAAAXXXXXXXXXXXXTTLFASPARPRSAMSVLSTSVLAVSRPGSPTAAAAPPTVAGEGGXXXXXXXXXXXXAKQRKSGDRTGLSFWRWGGKPRTGDE 197
            MEMACPAET RALG+RPMDVAKLSNFDPSGKATLILACAKAAWARRGVG GGQACGGGSPQGEAAADFGTT DQAGESCRPKDGGDEGGGDADASSTAGWAAAXXXXXXXXXXXXTTLFASPARPRSAMSVLSTSVLAVSRPGSPT AAAPP +AGEGGXXXXXXXXXXXXAKQR SGDRTGLSFWRWGGKPR+GDE
Sbjct:  267 MEMACPAETKRALGIRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGVGGQACGGGSPQGEAAADFGTTGDQAGESCRPKDGGDEGGGDADASSTAGWAAAXXXXXXXXXXXXTTLFASPARPRSAMSVLSTSVLAVSRPGSPTLAAAPPALAGEGGXXXXXXXXXXXXAKQRISGDRTGLSFWRWGGKPRSGDE 463
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1012.160.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.530e-11883.03protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.690e-9395.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1012contigEcto-sp9_F_contig1012:174..1725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1012.160.1mRNA_Ecto-sp9_F_contig1012.160.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1012 87..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1012.160.1 ID=prot_Ecto-sp9_F_contig1012.160.1|Name=mRNA_Ecto-sp9_F_contig1012.160.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=327bp
MEMACPAETNRALGMRPMDVAKLSNFDPSGKATLILACAKAAWARRGVGG
GGQACGGGSPQGEAAADFGTTSDQAGESCRPKDGGDEGGGDADASSTAGW
AAAAAAAGAAPASPATTLFASPARPRSAMSVLSTSVLAVSRPGSPTAAAA
PPTVAGEGGAAEGEAAAAEGAAKQRKSGDRTGLSFWRWGGKPRTGDEGGS
GGGGGSAGVEEGCGGWGTGMVRVPSFEPPVKGSGANGGGGGGGGGGGVLR
GGVERGSGVDRAPAFETPVAAAAAAAAAASSASNSGECLGGGSSSRSSGR
KRSVDGEVGGTLGKKGGGGVVNPGKE*
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