prot_Ecto-sp9_F_contig10118.158.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10118.158.1
Unique Name	prot_Ecto-sp9_F_contig10118.158.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	147

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10118.158.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR48_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 3.880e-78
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0

Query:   11 DVAERTIESTSSACRYSLEEALEQPAGSLSAACEAEVGRILDAKAHHKAGAGKPRRGGDKSSTDAPTTSSRTGSKNEQTEDHGTQAATVVLTFVSLVLVAVIALAYCASVGRPKRGGRRLHKKKQERIRERGKKRR 146
            DVAERTIESTSSACRY LEEALEQPAGSLSAACEAEVGRILDAKAHHKAGAGKPRRGGDKS TDAPT SSRTGSKNEQTEDHGTQAATVVLTFVSLVLVAV+ALAYCASVGRPKRGGRRLHKKKQERIRERGKKRR
Sbjct:    5 DVAERTIESTSSACRYRLEEALEQPAGSLSAACEAEVGRILDAKAHHKAGAGKPRRGGDKSGTDAPTKSSRTGSKNEQTEDHGTQAATVVLTFVSLVLVAVVALAYCASVGRPKRGGRRLHKKKQERIRERGKKRR 140

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10118.158.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10118.158.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Uncharacterized	3.880e-78	97.06	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..95
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 96..119
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 120..146
None	No IPR available	TMHMM	TMhelix		coord: 98..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10118	contig	Ecto-sp9_F_contig10118:2716..4452 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10118.158.1	mRNA_Ecto-sp9_F_contig10118.158.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10118 2716..4452 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10118.158.1 ID=prot_Ecto-sp9_F_contig10118.158.1|Name=mRNA_Ecto-sp9_F_contig10118.158.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=147bp
MVYVVLAETRDVAERTIESTSSACRYSLEEALEQPAGSLSAACEAEVGRI
LDAKAHHKAGAGKPRRGGDKSSTDAPTTSSRTGSKNEQTEDHGTQAATVV
LTFVSLVLVAVIALAYCASVGRPKRGGRRLHKKKQERIRERGKKRR*