prot_Ecto-sp9_F_contig101.130.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig101.130.1
Unique Nameprot_Ecto-sp9_F_contig101.130.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length312
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig101.130.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V9_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.770e-89
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 0 
Query:  113 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRQNFEAELREARGEASTSGEISEATAEEDACLPSPNALPAKRPRSTIXXXXXXXXXXXXXXXXXXXXXAAVKSPGGGLA 311
            MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMR+NFEAELREARGEASTSGEISEATAEE+ACLPSPN           XXXXXXXXXXXXXXXXXXXXXAAVKSPGGGLA
Sbjct:    1 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARGEASTSGEISEATAEEEACLPSPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVKSPGGGLA 199
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig101.130.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.770e-8993.47protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..110
NoneNo IPR availableCOILSCoilCoilcoord: 179..213
NoneNo IPR availableCOILSCoilCoilcoord: 44..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..311
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig101contigEcto-sp9_F_contig101:6624..11159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig101.130.1mRNA_Ecto-sp9_F_contig101.130.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig101 6476..12439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig101.130.1 ID=prot_Ecto-sp9_F_contig101.130.1|Name=mRNA_Ecto-sp9_F_contig101.130.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=312bp
MVRAFRLALWVLSTASVSTATLEARTDATERSILGKKVHKSDVIRVQDAR
LKRLEERVQNMSADEAVLAERARQHREMRLKGNKDLKDRVEELKLKLQNE
RERMQKEFESQLMAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAG
ERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEK
ESLLRQLKETMEMDDASRRRIILKFKAREHAMRQNFEAELREARGEASTS
GEISEATAEEDACLPSPNALPAKRPRSTIKSKSKMTTSSASPSMTAAPTM
AAVKSPGGGLA*
back to top