prot_Ecto-sp9_F_contig1008.116.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: Putative (hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 1.080e-20 Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query: 6 DPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
DPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY
Sbjct: 1250 DPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 1291
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: regulator (of nonsense transcripts UPF2-like isoform X1 n=7 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AKE6_DURZI) HSP 1 Score: 63.2 bits (152), Expect = 2.140e-10 Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 1 FCFVVDPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
+C+ +DPP DC RIR+V+ +L+ CG YF RG+ KL +FL FQRY
Sbjct: 816 YCYALDPPEDCFRIRMVITLLQTCGHYFDRGSSKRKLDRFLIHFQRY 862
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: Armadillo-type (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.460e-10 Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 0
Query: 6 DPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
DPPGDCLRIRLVV +LE C YFV G +L KFL FQRY
Sbjct: 817 DPPGDCLRIRLVVQLLEACAEYFVVGQSRPRLDKFLMHFQRY 858
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VH95_DUNTE) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
Query: 6 DPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
DPP D RIRL++A+LEGCG YF G +L +FL FQ Y
Sbjct: 374 DPPNDYFRIRLILALLEGCGQYFGSGPAGARLDRFLTFFQAY 415
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: Armadillo-type (protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q907_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 1.370e-6 Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query: 5 VDPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
+DPP D RIRLV+A+L CGSYF +GA +L +FL Q Y
Sbjct: 880 LDPPDDFFRIRLVIALLSTCGSYFSKGAAGRRLDRFLTFMQAY 922
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: Uncharacterized (protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VWZ6_TETOB) HSP 1 Score: 52.4 bits (124), Expect = 1.370e-6 Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query: 5 VDPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
+DPP D RIRLV+A+L CGSYF +GA +L +FL Q Y
Sbjct: 865 LDPPDDFFRIRLVIALLSTCGSYFSKGAAGRRLDRFLTFMQAY 907
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Match: MIF4G (domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z3E2_HAELA) HSP 1 Score: 48.1 bits (113), Expect = 4.290e-5 Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0
Query: 5 VDPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSKFLGVFQRY 47
+DP D RIRLV+ +L+ CG+YF +G +L +FL FQ Y
Sbjct: 51 LDPADDYFRIRLVIGLLDTCGTYFGQGVAGSRLDRFLTFFQAY 93 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1008.116.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig1008.116.1 ID=prot_Ecto-sp9_F_contig1008.116.1|Name=mRNA_Ecto-sp9_F_contig1008.116.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=47bpback to top |