prot_Ecto-sp9_F_contig100.57.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig100.57.1
Unique Nameprot_Ecto-sp9_F_contig100.57.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length476
Homology
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BLAST of mRNA_Ecto-sp9_F_contig100.57.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI)

HSP 1 Score: 674 bits (1740), Expect = 2.370e-240
Identity = 436/483 (90.27%), Postives = 445/483 (92.13%), Query Frame = 0 
Query:    1 MACEVDMEMHSSSQDHQLKDVGNSEVSKQISNGFSWWRPRSILRASLADVSLSTTNTSVVSNXXXXXXXXXXXXXXXXXESS------PSSLFDVAAAAQQQ-FETQLKPKIQHHNNWTRGSRDGTEAPSPDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQGLLGSSSGKLKSLKLAPIGSEQLAKHTAAAAAVDSDRPGTPVKGGGVGSTWCEGPLQVRRQERQDEXXXXXXXXXRRTPSKPPRPSHHAGAVGARFAVASEGGMGALGEKATAQAGVGEGTWREEGMDDETAAG-GGQVAAERMRALTSGQGEFLARSRGFAAGLVSHFLEETNCEFRVLQGGASCGMNTQQLEDAAARLEEAFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTRRVCHPEDIDSSPAPALRECASAIKEAVRDEGVNDRDTHEVVFVGRPMWELVSPVLDLSAKAGGGAGASG 475
            MACEVDME HSSSQD+Q KDVG+SEVSKQ SNGF+WWRPRSILRASLADVSLSTTNTSVVS XXXXXXXXXXXXXXXXX         PSSLFDVAAAAQQQ FETQLKPKIQHH+NWTRGSRDGTEAPSPDED XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQGLLGSSSGKLKSLKLAPIGSEQLAKHTAAAAAVDSDRPGTPV+GGG+GSTWC GPLQVRRQ     XXXXXXXXX        R +HHAGAVGARFAVASEGGMG LGEKATAQAGVGEG+WREEGMDDETAA  GGQVAAERMRALTSGQGEFLAR RGFAAGLVSHFLEETNCEFRVLQGGASCGMN QQLEDAAARLEE FVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTR  CHPEDIDSSPAPALRECASAIKEAVRDEGVND+DTHEVVFVGRPMWELVSPVLDLSAKAGGGAGASG
Sbjct:    1 MACEVDMEKHSSSQDYQPKDVGHSEVSKQNSNGFAWWRPRSILRASLADVSLSTTNTSVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSLFDVAAAAQQQQFETQLKPKIQHHSNWTRGSRDGTEAPSPDEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQGLLGSSSGKLKSLKLAPIGSEQLAKHTAAAAAVDSDRPGTPVRGGGIGSTWCVGPLQVRRQXXXXXXXXXXXXXXXXXXXXXXRTNHHAGAVGARFAVASEGGMGTLGEKATAQAGVGEGSWREEGMDDETAAEEGGQVAAERMRALTSGQGEFLAR-RGFAAGLVSHFLEETNCEFRVLQGGASCGMNAQQLEDAAARLEEVFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTR--CHPEDIDSSPAPALRECASAIKEAVRDEGVNDKDTHEVVFVGRPMWELVSPVLDLSAKAGGGAGASG 480
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig100.57.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized2.370e-24090.27protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig100contigEcto-sp9_F_contig100:22675..26025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig100.57.1mRNA_Ecto-sp9_F_contig100.57.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig100 22628..26077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig100.57.1 ID=prot_Ecto-sp9_F_contig100.57.1|Name=mRNA_Ecto-sp9_F_contig100.57.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=476bp
MACEVDMEMHSSSQDHQLKDVGNSEVSKQISNGFSWWRPRSILRASLADV
SLSTTNTSVVSNSNSTSSPPLPHQGGGEGESSPSSLFDVAAAAQQQFETQ
LKPKIQHHNNWTRGSRDGTEAPSPDEDDATNNHHNDADSATAASPSLLPA
YNNDSARRRRPEQGLLGSSSGKLKSLKLAPIGSEQLAKHTAAAAAVDSDR
PGTPVKGGGVGSTWCEGPLQVRRQERQDEQQRRRLDEQRRTPSKPPRPSH
HAGAVGARFAVASEGGMGALGEKATAQAGVGEGTWREEGMDDETAAGGGQ
VAAERMRALTSGQGEFLARSRGFAAGLVSHFLEETNCEFRVLQGGASCGM
NTQQLEDAAARLEEAFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRF
EVTLTRRVCHPEDIDSSPAPALRECASAIKEAVRDEGVNDRDTHEVVFVG
RPMWELVSPVLDLSAKAGGGAGASG*
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