mRNA_Ecto-sp9_F_contig9975.18038.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: ST (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 457 bits (1176), Expect = 9.130e-158 Identity = 234/249 (93.98%), Postives = 240/249 (96.39%), Query Frame = 1
Query: 1 AGWGPLDRRRDPYPSAYPPXXXXADSRTNFGEGYRNNNLYSEEHSGSPRLRQRRRGGRGRRLDAQISGGVRARRGSVQWARTEEQAWDWGVPLDAMPPEFTAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQV 747
+GWGPLDRRRDP+PSAYPPXXXXADSRTNFGEGY +NNLYSEEH G PR RQRR GGRGRRLDAQ+SGGV A +GSVQWARTEEQAWDWGVPLDAMPPEFTAEEMEELSRERAYLNGLVEETA ATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYT YGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQ+
Sbjct: 95 SGWGPLDRRRDPHPSAYPPXXXXADSRTNFGEGYGSNNLYSEEHIGRPRPRQRRTGGRGRRLDAQLSGGVGAGKGSVQWARTEEQAWDWGVPLDAMPPEFTAEEMEELSRERAYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQL 343
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 302 bits (774), Expect = 1.740e-99 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 1
Query: 286 MPPEFTAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQV 747
MPPEFTAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQ+
Sbjct: 1 MPPEFTAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQL 154
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: ST (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 171 bits (433), Expect = 9.670e-48 Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 313 MEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQP 735
+EE ++ R LN +V E+A TG Q CN+AF KTHKTASTT+AMI VRYA+RHD KLASF G VS +PL AVQQ++ESG+RVDVMHYH G ++G W + MY++IM++ E INYITVVRS R HFLSYYYYY+QP
Sbjct: 88 LEETAKCRELLNLMVTESAGKTGGQKCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQESGQRVDVMHYHVHE-GVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQP 227
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 164 bits (415), Expect = 8.900e-46 Identity = 83/128 (64.84%), Postives = 100/128 (78.12%), Query Frame = 1
Query: 352 LVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQP 735
+V E+A TG Q CN+AF KTHKTASTT+AMI VRYA+RHD KLASF G VS +PL AVQQ++E+G+RVDVMHYH G ++G W + MY++IM+E E INYITVVRS R HFLSYYYYY+QP
Sbjct: 1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHVHE-GVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQP 127
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.140e-39 Identity = 77/139 (55.40%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 334 RAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIE--ESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQ 744
R+YLN LV +A T Q N+AF KTHKTASTT A +L RYARRH++KLA F +H SAIPL EAVQQ E + R D+MHYH +A+G F+G W +A+ Y +I+R + +N++TVVR RSH LSYYYY++QP+ Q
Sbjct: 81 RSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFD-DHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQ 218
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.200e-39 Identity = 75/135 (55.56%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 334 RAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPE 738
R YLN LV+E+ AT Q CN+AF KTHKTASTT A +L RY +RHD+ +A F G H S+I L EA IE+SG+ VD+MHYH+ G ++G WAEAKA Y+KIMR+ ++N +TV+R +H++SYYYY++QPE
Sbjct: 7 REYLNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHG-HQSSIELPEA---IEDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPE 137
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 139 bits (351), Expect = 6.180e-36 Identity = 78/156 (50.00%), Postives = 100/156 (64.10%), Query Frame = 1
Query: 268 GVPLDAMPPEFTAEEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQP 735
G P P TA ++ SR R YLN LVE T G Q N+AF KTHKTASTT+A I+ RYA RH +KL+ FGG+ V+ L A + +E+G+RVD+MHYH + G + G W EA Y IMR + IN++TV+R RSH LSYYYY++QP
Sbjct: 10 GHPSVEGTPRKTAGDVGPQSR-RGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGGSSVT--DLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQP 162
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Sulfotransferase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 129 bits (324), Expect = 3.310e-31 Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 334 RAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASF--GGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQP 735
R YLNGLV ++A +Q N+AF KTHKTASTT+A IL RY RHD +A F GG +V L A +Q+ + G+RVD+MHYH+ G + G W +A A Y KIM +NY+TV+R +H+LSYYYY++ P
Sbjct: 144 RDYLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVD---LDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNP 276
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Sulfotransferase (n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA) HSP 1 Score: 120 bits (300), Expect = 5.290e-28 Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 307 EEMEELSRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAI-PLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQP 735
+E + +R YLNGLVE + T Q N+AFA T++T ST+MA IL RYA RH++KLA G SA+ P A Q + ERVD+MHYH + G G W A+ Y IMRE + +N +T++R R HF+SYYYY+V+P
Sbjct: 100 DEQSQAIPDRDYLNGLVEASVATTDHQEGNIAFANTYQTGSTSMAGILYRYAVRHNLKLARVGQE--SAVDPKWFATQVQQGKSERVDIMHYHISNKGHLKGLWPGARENYRGIMREPDNVNLLTMMREPREHFISYYYYFVEP 241
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE) HSP 1 Score: 115 bits (289), Expect = 2.780e-26 Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 331 ERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQ--IEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQV 747
+R YLNGLV +AE +Q NLA KTHKT STT+A++L RY RRHD+++A F G S IP+ EA +Q + + G+RVD+MHYH RW AK Y +MR + IN+IT++R R LS+Y ++V+ E V
Sbjct: 134 QRDYLNGLVAASAENKDEQLSNLALFKTHKTGSTTLAILLHRYGRRHDLEVAHFPG-FGSTIPIEEAARQTGLADDGKRVDIMHYHIDTDTPRQERWGSAKEHYRDVMRYPDDINFITILRDPRDWLLSFYSFFVEFETGV 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9975.18038.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9975.18038.1 >prot_Ecto-sp9_F_contig9975.18038.1 ID=prot_Ecto-sp9_F_contig9975.18038.1|Name=mRNA_Ecto-sp9_F_contig9975.18038.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=249bp AGWGPLDRRRDPYPSAYPPPPPPADSRTNFGEGYRNNNLYSEEHSGSPRLback to top mRNA from alignment at Ecto-sp9_F_contig9975:367..4053- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9975.18038.1 ID=mRNA_Ecto-sp9_F_contig9975.18038.1|Name=mRNA_Ecto-sp9_F_contig9975.18038.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3687bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9975:367..4053- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9975:367..4053- >mRNA_Ecto-sp9_F_contig9975.18038.1 ID=mRNA_Ecto-sp9_F_contig9975.18038.1|Name=mRNA_Ecto-sp9_F_contig9975.18038.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1494bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9975:367..4053- (Ectocarpus species9 EcSCA_722f female)back to top |