mRNA_Ecto-sp9_F_contig9963.18029.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE) HSP 1 Score: 711 bits (1834), Expect = 8.290e-257 Identity = 342/372 (91.94%), Postives = 356/372 (95.70%), Query Frame = 1
Query: 1 GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 1116
GDGKD RLVVVGKERDP LVVDYANVETDLGLPPCYSST ADPSQG+WNECAGG+D+SPANTGNFTGPWKT RTEKR CSERWSAEH+G GPVPPMPYWKWEPSACRLEEVD+AKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHV LTMDTY+ACDG LTLSWYRNDFLDTRTDGFDTVHCEDPD SMSHCMVFAGMY +DATL+QFDTLVVN+GAHLRSG LEAYGSMMK+ASESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEAT+GGWTLLDAYSPTILR D H+S DGLHYCLPGPIDHWVVLLYNILLEKVKSDR+E
Sbjct: 87 GDGKDQRRLVVVGKERDPTLVVDYANVETDLGLPPCYSSTVADPSQGKWNECAGGMDESPANTGNFTGPWKTNRTEKR-CSERWSAEHDGVGPVPPMPYWKWEPSACRLEEVDEAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVPLTMDTYTACDGELTLSWYRNDFLDTRTDGFDTVHCEDPDASMSHCMVFAGMY-HDATLTQFDTLVVNSGAHLRSGGLEAYGSMMKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDRQE 456
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI) HSP 1 Score: 614 bits (1584), Expect = 4.460e-219 Identity = 303/369 (82.11%), Postives = 328/369 (88.89%), Query Frame = 1
Query: 1 GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSD 1107
GDGKDPP LVVVG+ER PALVVD ANVETDLGLPPCYSST+ADPSQGRWNECAGG+D SP NTG +GP+ T RT K C +RWSAEHEGE PVPPMPYWKWEPSACRLEEVD+AKFCRVM+GRKGLLFAGDSLTGEMIDTL AVLRAT VKHVHL MDTY+ACDG LTLSWYRNDFLDTR DGFDT CE+PD+S+S CMVFA +DATLSQ+DTL+VNAGAH + G +EAYGSM+K+A ESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMF GPV+LDTALDLV KGPP ++WTT D+N LLEEAFEATHG WTLLDAYSPTILR D H+S DGLHYCLPGPIDHWVVLLYNILLEKVKSD
Sbjct: 74 GDGKDPPPLVVVGEERYPALVVDCANVETDLGLPPCYSSTSADPSQGRWNECAGGMDASPTNTG--SGPFITGRTAKG-CGKRWSAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFA----DDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEATHG-WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 434
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 3.440e-189 Identity = 275/415 (66.27%), Postives = 303/415 (73.01%), Query Frame = 1
Query: 19 PRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDS-------------------------LTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYS---------------------NDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDR-------MFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKS 1104
P LV+ G+ER L +D VE D LP CYSS ADPSQGRW +C GGV++SPANTGNFTGPWK E C ERWS EH+G+G PPMPYWKWEPSACRLEEVD+ FC VMEGRKGLLF G+ LTGEMIDTLA +LRAT V++V +T TYSACDGALTLSWYRND+LDTRTDGFDTVHCEDPD+S S C+VFAGM S +DATL QFDTLVVNAGAH RSG LEAYGSMMK+ASE LTSSMRRLHGDNAILVVRNTVPGHGES++R MF GPVD+DTALDLV KG P Y W+TFGD+NKLLEEAF A HG WTLLDAYSPTILR D H S DGLHYC+PGPID+WVVLLYNILLE+V +
Sbjct: 4 PLLVIDGEERGRMLFLDGMEVEADPRLPTCYSSMVADPSQGRWKKCEGGVEESPANTGNFTGPWKINTLEGS-CGERWSEEHQGQGHAPPMPYWKWEPSACRLEEVDQISFCGVMEGRKGLLFVGEGRVVRRPKKDGLAVGRKNPASSTRQLLTGEMIDTLAVILRATRVEYVPMTGKTYSACDGALTLSWYRNDYLDTRTDGFDTVHCEDPDLSASRCVVFAGMASIKMEMVRAATMQCQPALMFIADDATLIQFDTLVVNAGAHRRSGGLEAYGSMMKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILLERVTN 417
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE) HSP 1 Score: 490 bits (1262), Expect = 5.310e-172 Identity = 241/313 (77.00%), Postives = 270/313 (86.26%), Query Frame = 1
Query: 175 SPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRR 1113
SP NTG +GP+ T RT + C +RW+AEHEGE PVPPMPYWKWEPSACRLEEVD+AKFCRVM+GRKGLLFAGDSLTGEMIDTL AVLRAT VKHV L MDTY+ACDG LTLSWYRND+LDTR DGFDT CE+PD+S+S CM + DATLSQ+DTL+VNAGAH + G +EAYGSM+K+A+ESLT+SMRRLHGD+AILVVRNTVPGHGESFDRMF GPV+LDTALDLV KGPP ++WTT D+N LLEEAF+ATHG TLLDAYSPTILR D H+S DGLHYCLPGPIDHWVVLLYNILLEKV SD +
Sbjct: 11 SPTNTG--SGPFVTGRTAEG-CGKRWAAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVKLKMDTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQCMTY------DATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGR-TLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVNSDNK 313
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI) HSP 1 Score: 439 bits (1128), Expect = 8.550e-153 Identity = 226/317 (71.29%), Postives = 231/317 (72.87%), Query Frame = 1
Query: 166 VDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 1116
+DDSPANTGNFTGPWKTTRTEKR CSERWSAEHEGE PVPPMPYWKWEPSACRLEE DKAKFCRVMEGRKGLLFA +DATLSQFDTLVVNAGAH RSG ++AYG MMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPP YKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILR DFH+SEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE
Sbjct: 1 MDDSPANTGNFTGPWKTTRTEKR-CSERWSAEHEGEEPVPPMPYWKWEPSACRLEEADKAKFCRVMEGRKGLLFA------------------------------------------------------------------------------DDATLSQFDTLVVNAGAHRRSGGMKAYGLMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 238
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE) HSP 1 Score: 311 bits (798), Expect = 1.210e-100 Identity = 175/359 (48.75%), Postives = 232/359 (64.62%), Query Frame = 1
Query: 70 YANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRAT---LVKHVHLTMDT-YSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSMS-HCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFH---SSEEDGLHYCLPGPIDHWVVLLYNILLEK 1095
Y ++E D+ LP CYS+ AA+PS G W C GV++SP N + P K C ++W+ H G PMPY+ W+ + C LE+V++ KFCR MEGRKG+L GDS+T M+ TL +VLRAT + HL + AC+G + +++YRNDFLDT T DGF C+ + + C VFA +D TL ++DTL++N+GAH RS L+ Y M++AS+ +T+SM+RLHGD+A+L+VRNT PGHG + +R F GPVD+DTALDLVA GP +Y+W F N +LEEAF AT G W LDAY+PT+LR DFH D LHYC+PGPIDHWV LLYN+LL K
Sbjct: 38 YPSIEFDV-LPQCYSTPAANPSNGSWRRCENGVNESPTNPDDMMNP-----NPKTICYQKWAEHH---GSEEPMPYYTWDAAECSLEDVNEEKFCRAMEGRKGILLVGDSITDLMVRTLVSVLRATPEQVHSKYHLNHALKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGF----CDSRNPKRNAQCEVFA----DDDTLKEYDTLIINSGAHPRS--LDEYREAMETASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDG-WKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAK 376
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.040e-98 Identity = 171/354 (48.31%), Postives = 223/354 (62.99%), Query Frame = 1
Query: 94 GLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATL--------VKHVHLTMDTYSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSM-SHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFHSSEEDG---LHYCLPGPIDHWVVLLYNILLEK 1095
GLP CYS+ AA+PS G W C GV++SP N + P K C ++W+ H G PMPY+ W+ C L+ VD+ KFC ++GRKG+L GDS+T M+ TL +VLRAT + H H + AC+G + +++YRNDFLDT T DGF C+ + S C VFA +D TL ++DTL++N+GAH RS L+ Y M +AS+ LT+SM+RLHGD+A+L+VRNT PGHG +R F GPVD+DTALDLVA GP +Y+W F + N +LEEAF AT G W LDAY+PT+LR DFH +D LHYC+PGPI HWV LLYN+LL K
Sbjct: 44 GLPQCYSTPAANPSNGSWPRCENGVNESPTNPDDMMNP-----NPKTICYQKWAELH---GSEEPMPYYTWDAVECSLDNVDEEKFCHALQGRKGILLVGDSITTLMVRTLVSVLRATSEPVHSKYHLNHAH----KWGACNGEVKIAFYRNDFLDTTTRRSAFWDGF----CDSRNPKRNSQCEVFA----DDYTLEEYDTLIINSGAHPRS--LDEYRDSMGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDG-WKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAK 374
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE) HSP 1 Score: 305 bits (782), Expect = 7.770e-98 Identity = 172/344 (50.00%), Postives = 216/344 (62.79%), Query Frame = 1
Query: 85 TDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTE---KRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDG-FDTVHCEDPD----VSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHG-DNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILL 1089
T+ L CYS+ ADP +GRW CA GV+DSPAN G W+ +E +C W+ EG P PYW WEP+ C L+ V + K CRV+EGRKGLL GDSLT TLA++LRA + L D + AC G + L + RND LDTRT + +V CE+ V+ + C +FA DATL +FDTLVVN+GAH R A +G M++++++LTSSM+RLHG D AILVVRNTVPGH +RMF PV+ AL LVA+ P Y+W +F RN L++AF G WTLLDAYSPT+LR D H D LHYC+PGP DHW +LLYNILL
Sbjct: 70 TEQRLLQCYSTPEADPFEGRWRSCANGVEDSPAN---MVG-WEFPTSEFGFLAKCQNIWNKRKRVEGETGPRPYWAWEPTKCSLDAVSEEKLCRVLEGRKGLLLVGDSLTRLSTTTLASILRAKSLT-ADLYKDDWEACGGKVKLRFMRNDVLDTRTKPRYRSVRCEESVGGALVNNTRCRIFA----TDATLREFDTLVVNSGAHPRPAA--EFGREMEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDSYEWDSFESRNVQLQKAFSPDRG-WTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILL 401
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI) HSP 1 Score: 296 bits (757), Expect = 1.220e-94 Identity = 164/346 (47.40%), Postives = 218/346 (63.01%), Query Frame = 1
Query: 97 LPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSMS-HCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFHSSEEDG---LHYCLPGPIDHWVVLLYNILLEK 1095
LP CYS+ AA+PS G W C GV++SP N + P K C ++W+ H G PMPY+ W+ + C L+ VD+ KFCR MEGRKG+L GDS+T M+ + + A + AC+G + +++YRNDFLDT T DGF C+ + + C VFA +D TL ++DTL++N+GAH RS L+ Y M++AS+ LT SM+RLHGD+A+L+VRNT PGHG + +R F GPVD+DTALDLVA GP +Y+W F + N +LEEAF AT G W LDAY+PT+LR DFH +D LHYC+PGPIDHW+ LLYN+LL K
Sbjct: 47 LPQCYSTPAANPSNGSWRRCENGVNESPTNPDDMMNP-----NPKTICYQKWAEHH---GSEEPMPYYTWDAAECSLDNVDEEKFCRAMEGRKGILLVGDSITDLMVHSKYHLNHAR----------KWGACNGEVKIAFYRNDFLDTTTRRSSFWDGF----CDSRNPKRNAQCEVFA----DDDTLKEYDTLIINSGAHPRS--LDEYRDSMETASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAILEEAFLINATDG-WKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNMLLAK 363
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.130e-44 Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = 1
Query: 715 MKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFH---SSEEDGLHYCLPGPIDHWVVLLYNILLEK 1095
M++AS+ +T+SM+RLHGD+A+L+VRNT PGHG + +R F GPVD+DTA+DLVA GP +Y+W F + N +LEEAF AT G W LDAY+PT+LR DFH D LHYC+PGPIDHWV LLY++LL K
Sbjct: 1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDG-WKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAK 132 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9963.18029.1 >prot_Ecto-sp9_F_contig9963.18029.1 ID=prot_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=373bp GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNback to top mRNA from alignment at Ecto-sp9_F_contig9963:666..4834- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9963.18029.1 ID=mRNA_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4169bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9963:666..4834- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9963:666..4834- >mRNA_Ecto-sp9_F_contig9963.18029.1 ID=mRNA_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2238bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9963:666..4834- (Ectocarpus species9 EcSCA_722f female)back to top |