mRNA_Ecto-sp9_F_contig9963.18029.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9963.18029.1
Unique NamemRNA_Ecto-sp9_F_contig9963.18029.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE)

HSP 1 Score: 711 bits (1834), Expect = 8.290e-257
Identity = 342/372 (91.94%), Postives = 356/372 (95.70%), Query Frame = 1
Query:    1 GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 1116
            GDGKD  RLVVVGKERDP LVVDYANVETDLGLPPCYSST ADPSQG+WNECAGG+D+SPANTGNFTGPWKT RTEKR CSERWSAEH+G GPVPPMPYWKWEPSACRLEEVD+AKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHV LTMDTY+ACDG LTLSWYRNDFLDTRTDGFDTVHCEDPD SMSHCMVFAGMY +DATL+QFDTLVVN+GAHLRSG LEAYGSMMK+ASESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEAT+GGWTLLDAYSPTILR D H+S  DGLHYCLPGPIDHWVVLLYNILLEKVKSDR+E
Sbjct:   87 GDGKDQRRLVVVGKERDPTLVVDYANVETDLGLPPCYSSTVADPSQGKWNECAGGMDESPANTGNFTGPWKTNRTEKR-CSERWSAEHDGVGPVPPMPYWKWEPSACRLEEVDEAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVPLTMDTYTACDGELTLSWYRNDFLDTRTDGFDTVHCEDPDASMSHCMVFAGMY-HDATLTQFDTLVVNSGAHLRSGGLEAYGSMMKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDRQE 456          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 4.460e-219
Identity = 303/369 (82.11%), Postives = 328/369 (88.89%), Query Frame = 1
Query:    1 GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSD 1107
            GDGKDPP LVVVG+ER PALVVD ANVETDLGLPPCYSST+ADPSQGRWNECAGG+D SP NTG  +GP+ T RT K  C +RWSAEHEGE PVPPMPYWKWEPSACRLEEVD+AKFCRVM+GRKGLLFAGDSLTGEMIDTL AVLRAT VKHVHL MDTY+ACDG LTLSWYRNDFLDTR DGFDT  CE+PD+S+S CMVFA    +DATLSQ+DTL+VNAGAH + G +EAYGSM+K+A ESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMF GPV+LDTALDLV KGPP ++WTT  D+N LLEEAFEATHG WTLLDAYSPTILR D H+S  DGLHYCLPGPIDHWVVLLYNILLEKVKSD
Sbjct:   74 GDGKDPPPLVVVGEERYPALVVDCANVETDLGLPPCYSSTSADPSQGRWNECAGGMDASPTNTG--SGPFITGRTAKG-CGKRWSAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFA----DDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEATHG-WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 434          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE)

HSP 1 Score: 538 bits (1386), Expect = 3.440e-189
Identity = 275/415 (66.27%), Postives = 303/415 (73.01%), Query Frame = 1
Query:   19 PRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDS-------------------------LTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYS---------------------NDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDR-------MFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKS 1104
            P LV+ G+ER   L +D   VE D  LP CYSS  ADPSQGRW +C GGV++SPANTGNFTGPWK    E   C ERWS EH+G+G  PPMPYWKWEPSACRLEEVD+  FC VMEGRKGLLF G+                          LTGEMIDTLA +LRAT V++V +T  TYSACDGALTLSWYRND+LDTRTDGFDTVHCEDPD+S S C+VFAGM S                     +DATL QFDTLVVNAGAH RSG LEAYGSMMK+ASE LTSSMRRLHGDNAILVVRNTVPGHGES++R       MF GPVD+DTALDLV KG P Y W+TFGD+NKLLEEAF A HG WTLLDAYSPTILR D H S  DGLHYC+PGPID+WVVLLYNILLE+V +
Sbjct:    4 PLLVIDGEERGRMLFLDGMEVEADPRLPTCYSSMVADPSQGRWKKCEGGVEESPANTGNFTGPWKINTLEGS-CGERWSEEHQGQGHAPPMPYWKWEPSACRLEEVDQISFCGVMEGRKGLLFVGEGRVVRRPKKDGLAVGRKNPASSTRQLLTGEMIDTLAVILRATRVEYVPMTGKTYSACDGALTLSWYRNDYLDTRTDGFDTVHCEDPDLSASRCVVFAGMASIKMEMVRAATMQCQPALMFIADDATLIQFDTLVVNAGAHRRSGGLEAYGSMMKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILLERVTN 417          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 5.310e-172
Identity = 241/313 (77.00%), Postives = 270/313 (86.26%), Query Frame = 1
Query:  175 SPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRR 1113
            SP NTG  +GP+ T RT +  C +RW+AEHEGE PVPPMPYWKWEPSACRLEEVD+AKFCRVM+GRKGLLFAGDSLTGEMIDTL AVLRAT VKHV L MDTY+ACDG LTLSWYRND+LDTR DGFDT  CE+PD+S+S CM +      DATLSQ+DTL+VNAGAH + G +EAYGSM+K+A+ESLT+SMRRLHGD+AILVVRNTVPGHGESFDRMF GPV+LDTALDLV KGPP ++WTT  D+N LLEEAF+ATHG  TLLDAYSPTILR D H+S  DGLHYCLPGPIDHWVVLLYNILLEKV SD +
Sbjct:   11 SPTNTG--SGPFVTGRTAEG-CGKRWAAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVKLKMDTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQCMTY------DATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGR-TLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVNSDNK 313          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 8.550e-153
Identity = 226/317 (71.29%), Postives = 231/317 (72.87%), Query Frame = 1
Query:  166 VDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 1116
            +DDSPANTGNFTGPWKTTRTEKR CSERWSAEHEGE PVPPMPYWKWEPSACRLEE DKAKFCRVMEGRKGLLFA                                                                              +DATLSQFDTLVVNAGAH RSG ++AYG MMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPP YKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILR DFH+SEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE
Sbjct:    1 MDDSPANTGNFTGPWKTTRTEKR-CSERWSAEHEGEEPVPPMPYWKWEPSACRLEEADKAKFCRVMEGRKGLLFA------------------------------------------------------------------------------DDATLSQFDTLVVNAGAHRRSGGMKAYGLMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILLEKVKSDRRE 238          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.210e-100
Identity = 175/359 (48.75%), Postives = 232/359 (64.62%), Query Frame = 1
Query:   70 YANVETDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRAT---LVKHVHLTMDT-YSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSMS-HCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFH---SSEEDGLHYCLPGPIDHWVVLLYNILLEK 1095
            Y ++E D+ LP CYS+ AA+PS G W  C  GV++SP N  +   P       K  C ++W+  H   G   PMPY+ W+ + C LE+V++ KFCR MEGRKG+L  GDS+T  M+ TL +VLRAT   +    HL     + AC+G + +++YRNDFLDT T      DGF    C+  +   +  C VFA    +D TL ++DTL++N+GAH RS  L+ Y   M++AS+ +T+SM+RLHGD+A+L+VRNT PGHG +  +R F GPVD+DTALDLVA GP +Y+W  F   N +LEEAF   AT G W  LDAY+PT+LR DFH       D LHYC+PGPIDHWV LLYN+LL K
Sbjct:   38 YPSIEFDV-LPQCYSTPAANPSNGSWRRCENGVNESPTNPDDMMNP-----NPKTICYQKWAEHH---GSEEPMPYYTWDAAECSLEDVNEEKFCRAMEGRKGILLVGDSITDLMVRTLVSVLRATPEQVHSKYHLNHALKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGF----CDSRNPKRNAQCEVFA----DDDTLKEYDTLIINSGAHPRS--LDEYREAMETASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDG-WKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAK 376          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.040e-98
Identity = 171/354 (48.31%), Postives = 223/354 (62.99%), Query Frame = 1
Query:   94 GLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATL--------VKHVHLTMDTYSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSM-SHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFHSSEEDG---LHYCLPGPIDHWVVLLYNILLEK 1095
            GLP CYS+ AA+PS G W  C  GV++SP N  +   P       K  C ++W+  H   G   PMPY+ W+   C L+ VD+ KFC  ++GRKG+L  GDS+T  M+ TL +VLRAT         + H H     + AC+G + +++YRNDFLDT T      DGF    C+  +    S C VFA    +D TL ++DTL++N+GAH RS  L+ Y   M +AS+ LT+SM+RLHGD+A+L+VRNT PGHG   +R F GPVD+DTALDLVA GP +Y+W  F + N +LEEAF   AT G W  LDAY+PT+LR DFH   +D    LHYC+PGPI HWV LLYN+LL K
Sbjct:   44 GLPQCYSTPAANPSNGSWPRCENGVNESPTNPDDMMNP-----NPKTICYQKWAELH---GSEEPMPYYTWDAVECSLDNVDEEKFCHALQGRKGILLVGDSITTLMVRTLVSVLRATSEPVHSKYHLNHAH----KWGACNGEVKIAFYRNDFLDTTTRRSAFWDGF----CDSRNPKRNSQCEVFA----DDYTLEEYDTLIINSGAHPRS--LDEYRDSMGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDG-WKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAK 374          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 7.770e-98
Identity = 172/344 (50.00%), Postives = 216/344 (62.79%), Query Frame = 1
Query:   85 TDLGLPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTE---KRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDG-FDTVHCEDPD----VSMSHCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHG-DNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGPIDHWVVLLYNILL 1089
            T+  L  CYS+  ADP +GRW  CA GV+DSPAN     G W+   +E     +C   W+     EG   P PYW WEP+ C L+ V + K CRV+EGRKGLL  GDSLT     TLA++LRA  +    L  D + AC G + L + RND LDTRT   + +V CE+      V+ + C +FA     DATL +FDTLVVN+GAH R  A   +G  M++++++LTSSM+RLHG D AILVVRNTVPGH    +RMF  PV+   AL LVA+ P  Y+W +F  RN  L++AF    G WTLLDAYSPT+LR D H    D LHYC+PGP DHW +LLYNILL
Sbjct:   70 TEQRLLQCYSTPEADPFEGRWRSCANGVEDSPAN---MVG-WEFPTSEFGFLAKCQNIWNKRKRVEGETGPRPYWAWEPTKCSLDAVSEEKLCRVLEGRKGLLLVGDSLTRLSTTTLASILRAKSLT-ADLYKDDWEACGGKVKLRFMRNDVLDTRTKPRYRSVRCEESVGGALVNNTRCRIFA----TDATLREFDTLVVNSGAHPRPAA--EFGREMEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDSYEWDSFESRNVQLQKAFSPDRG-WTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILL 401          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.220e-94
Identity = 164/346 (47.40%), Postives = 218/346 (63.01%), Query Frame = 1
Query:   97 LPPCYSSTAADPSQGRWNECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYWKWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVHLTMDTYSACDGALTLSWYRNDFLDTRT------DGFDTVHCEDPDVSMS-HCMVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFHSSEEDG---LHYCLPGPIDHWVVLLYNILLEK 1095
            LP CYS+ AA+PS G W  C  GV++SP N  +   P       K  C ++W+  H   G   PMPY+ W+ + C L+ VD+ KFCR MEGRKG+L  GDS+T  M+ +   +  A            + AC+G + +++YRNDFLDT T      DGF    C+  +   +  C VFA    +D TL ++DTL++N+GAH RS  L+ Y   M++AS+ LT SM+RLHGD+A+L+VRNT PGHG +  +R F GPVD+DTALDLVA GP +Y+W  F + N +LEEAF   AT G W  LDAY+PT+LR DFH   +D    LHYC+PGPIDHW+ LLYN+LL K
Sbjct:   47 LPQCYSTPAANPSNGSWRRCENGVNESPTNPDDMMNP-----NPKTICYQKWAEHH---GSEEPMPYYTWDAAECSLDNVDEEKFCRAMEGRKGILLVGDSITDLMVHSKYHLNHAR----------KWGACNGEVKIAFYRNDFLDTTTRRSSFWDGF----CDSRNPKRNAQCEVFA----DDDTLKEYDTLIINSGAHPRS--LDEYRDSMETASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAILEEAFLINATDG-WKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNMLLAK 363          
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.130e-44
Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = 1
Query:  715 MKSASESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAF--EATHGGWTLLDAYSPTILRVDFH---SSEEDGLHYCLPGPIDHWVVLLYNILLEK 1095
            M++AS+ +T+SM+RLHGD+A+L+VRNT PGHG +  +R F GPVD+DTA+DLVA GP +Y+W  F + N +LEEAF   AT G W  LDAY+PT+LR DFH       D LHYC+PGPIDHWV LLY++LL K
Sbjct:    1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDG-WKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAK 132          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9963.18029.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.290e-25791.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.460e-21982.11protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.440e-18966.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.310e-17277.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.550e-15371.29protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.210e-10048.75protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.040e-9848.31protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.770e-9850.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.220e-9447.40protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.130e-4459.40protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9963contigEcto-sp9_F_contig9963:666..4834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score83.6
Seed ortholog evalue2.2e-13
Seed eggNOG ortholog5286.M7WYV5
EggNOG OGs29J3F@1,2RSBH@2759,3AD8Z@33154,3P97F@4751,3V2WR@5204
Best tax levelBasidiomycota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1119
Cds size1119
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9963.18029.1prot_Ecto-sp9_F_contig9963.18029.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9963 666..4834 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931093.308758-CDS-Ecto-sp9_F_contig9963:665..8631622931093.308758-CDS-Ecto-sp9_F_contig9963:665..863Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 666..863 -
1692279030.0707674-CDS-Ecto-sp9_F_contig9963:665..8631692279030.0707674-CDS-Ecto-sp9_F_contig9963:665..863Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 666..863 -
1622931093.3247623-CDS-Ecto-sp9_F_contig9963:1238..13351622931093.3247623-CDS-Ecto-sp9_F_contig9963:1238..1335Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 1239..1335 -
1692279030.0841951-CDS-Ecto-sp9_F_contig9963:1238..13351692279030.0841951-CDS-Ecto-sp9_F_contig9963:1238..1335Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 1239..1335 -
1622931093.3379612-CDS-Ecto-sp9_F_contig9963:2091..22901622931093.3379612-CDS-Ecto-sp9_F_contig9963:2091..2290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 2092..2290 -
1692279030.097558-CDS-Ecto-sp9_F_contig9963:2091..22901692279030.097558-CDS-Ecto-sp9_F_contig9963:2091..2290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 2092..2290 -
1622931093.3515272-CDS-Ecto-sp9_F_contig9963:3131..33651622931093.3515272-CDS-Ecto-sp9_F_contig9963:3131..3365Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 3132..3365 -
1692279030.1158109-CDS-Ecto-sp9_F_contig9963:3131..33651692279030.1158109-CDS-Ecto-sp9_F_contig9963:3131..3365Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 3132..3365 -
1622931093.3656962-CDS-Ecto-sp9_F_contig9963:3830..39881622931093.3656962-CDS-Ecto-sp9_F_contig9963:3830..3988Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 3831..3988 -
1692279030.1284316-CDS-Ecto-sp9_F_contig9963:3830..39881692279030.1284316-CDS-Ecto-sp9_F_contig9963:3830..3988Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 3831..3988 -
1622931093.3827107-CDS-Ecto-sp9_F_contig9963:4601..48341622931093.3827107-CDS-Ecto-sp9_F_contig9963:4601..4834Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 4602..4834 -
1692279030.1386719-CDS-Ecto-sp9_F_contig9963:4601..48341692279030.1386719-CDS-Ecto-sp9_F_contig9963:4601..4834Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9963 4602..4834 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9963.18029.1

>prot_Ecto-sp9_F_contig9963.18029.1 ID=prot_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=373bp
GDGKDPPRLVVVGKERDPALVVDYANVETDLGLPPCYSSTAADPSQGRWN
ECAGGVDDSPANTGNFTGPWKTTRTEKRRCSERWSAEHEGEGPVPPMPYW
KWEPSACRLEEVDKAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATL
VKHVHLTMDTYSACDGALTLSWYRNDFLDTRTDGFDTVHCEDPDVSMSHC
MVFAGMYSNDATLSQFDTLVVNAGAHLRSGALEAYGSMMKSASESLTSSM
RRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWT
TFGDRNKLLEEAFEATHGGWTLLDAYSPTILRVDFHSSEEDGLHYCLPGP
IDHWVVLLYNILLEKVKSDRRE*
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mRNA from alignment at Ecto-sp9_F_contig9963:666..4834-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9963.18029.1 ID=mRNA_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4169bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9963:666..4834- (Ectocarpus species9 EcSCA_722f female)
GGGGATGGAAAGGATCCACCACGGCTTGTCGTCGTTGGGAAGGAAAGGGA TCCAGCCCTTGTTGTCGACTATGCGAACGTCGAAACCGACCTCGGCTTGC CGCCGTGCTACTCGAGCACGGCCGCTGATCCTTCCCAAGGGAGATGGAAC GAGTGCGCAGGAGGCGTGGACGATTCCCCGGCAAATACGGGCAACTTCAC CGGCCCGTGGAAAACCACTCGAACGGAGAAACGGTAAGATGAAAGTGGGA TCAAAGGCTTTCGTTGCCCGGAGTGTTCGTGGGTGATGGCCGACGGGCTG CTTGTCGTGTAGCGGCTGCGTGCAGCAACGGGTGTAAGCCCCACTAGAGG TGTCGTTTTCGTAGCCTTCGGAGCTTTTAGAAGTATTTTTTTTTCCTGTT CCAGTAACCCTCCGTACAACCTCATGTGTGTGTGCATGTCTCTGTCCATC CACCCGTCCGCTACGACAATGGTGTGTTCAGCTCGTAGCTACGCCCGGCG CAGCTGCATTCCGCCACAGTCGTCCCTATCATCGTGTGGTTGCACGAGAA GCATGTATTTTTGTTTTTTGGTGAGAACAATGCTGGCAGGAGGCGTGCTT GCGAACAATCCATATTGCGCGAGACGCCTGGACCGGCTAGAAATAAAACG TCTAGAAAATGGGGAAAGTCGAAATTCGAAAAAACCCGTCTCTCTCCGTC GTCGTCTGGGTGGGCCGTCTAGATTGTGCGTTACGGCAGTGACGAGCCCA GTCATATGACACAAATACGCACAACACGAGAGGTGCATGTGTTTGTTTGT TACTCCCGTTTTATGTGTTGTACGTGAAAACGCCGCGCGCTCGCAGCAGG TGTAGCGAAAGATGGTCAGCAGAGCATGAGGGTGAAGGGCCCGTCCCCCC CATGCCGTACTGGAAGTGGGAGCCTTCGGCGTGCCGGCTGGAGGAGGTGG ACAAAGCCAAGTTCTGCCGCGTCATGGAGGGGAGGAAGGGGTTGCTCTTC GCGGGTGAGAGCCGCATGGTTTGGGGCGGCGGTTTGCTTAACCCCCGCCC GAAGCGAGATGGCGTGACCGTGAGATGCAAACGGCAACCCCTGAAGCAAC ACTGCCTGCTCAGAAGAGAATAGTGGGGAACATGGCGGAGGGTAAGGGGT GCGCCCGCACCCGGGCAGAAGGGGGGTCGAGGCGAGCAAGGAGGGCGGGA AAAACCACCTGAACACCGGTGCATGGAGCAAAGCCTGCGTTTCCTCTTTC CGCAAAGGCTTGTAAGAATTGTTGACATGGCCTGATTTCACGTGCAAGAA AAGCACAAGATCTGACAGGACGGTCGGTGGATCTGCAAACCCACCACCTA TGCGTTCTCCTGCCCTGTGTGGAACTGAGGGTGCAGGCAGGTCTTGATAG ATACCGACGACACTCAACCAACAACAACACCTTGTCTCCCCCCCTCCCAT CTCCCCCCTCCCTGCCTAGGGGACAGCCTGACGGGTGAGATGATCGATAC TCTGGCGGCGGTTCTGCGCGCGACGCTCGTCAAGCACGTGCACCTGACCA TGGACACCTACTCCGCCTGCGACGGAGCGCTGACGCTGTCGTGGTACCGC AACGACTTCCTCGACACGCGAACGGACGGCTTCGACACGGTGCATTGCGA GGACCCCGACGTCAGCATGTCGCACTGCATGGTCTTTGCAGGCATGTACA GCAGTCAGTCGTTGATCCGATATAAGACGGGTACCTTATAGGAGGTGCTC TGATATAAGAGGGTCGAAATGGGTTGTCATGAAGTCGACCCACTATAGTT GTAATAGTATAGTTGGGTACCGTCTTATTCCGCTATAAGAGGGGACTCCG AGATGAGAGCGTCGAGGGGCTTTGCCTCTTATATCGGAGCCACAACGGTA TGCGTTTAGCATTCGTGCCACTGGGAACCCCCAACGTGCCTTGCTTTCGC GCGCATTCACGGGTACCACAACGACACTTTTGCGCGCTCCCGCGTGGCAG AATCAAACAATTTTGGAGGAATTCCAGTCTGTCTATCCATCCCTGGCCGA AACCGAGAATCATCACCGAACGAACACGAATCGCATTGTTTTGCCAAAAG TTTTAACCCTCCGTGCTTTACACCATGGTACGTTTAATTCCCGGGGCTGT CTGCAGAGTCGGCCGAAACAAAATTGTCCCAGCAATCCTCTAGTCTGTCC GGGACAGCGTTGTAGACGTACTGTAGGCCAAGAATGAGTCTTACCAATCC GTTCTGCTGATGGAGTGAAATGAGGCTGCATGTTTTGATGTCGAGAGCAG AGACTTCTCCAGTCTTCGTACGTAGTGCCTAGCTCTCTGTCTCAGGTGTG GTATGCATACGTTTCGAGCGAAAATGGGAACACAACGGTGCTGAACAACG TAGTGGCGTCAAAGATATTTTGCACTCGCGCGTGATTTCTGCCCTGAACC AGTTCGACAAATCGATCCTATTATTGTATCGATGCAACGTCAACCTGCGT CGAGTAACGATGTGATGTCAACTTGCTTTCATCTTTTCTCGCAGATGATG CTACCTTGAGCCAGTTCGACACCCTCGTCGTGAACGCTGGGGCACACCTT CGATCGGGGGCGTTGGAGGCGTACGGGTCGATGATGAAGAGCGCTAGTGA GAGCCTGACCTCGTCGATGAGACGGTTACACGGGGATAACGCCATCTTGG TGGTCAGGAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAGGTGGGAG ACGTTTCAAGAAGGGGATGTCGGCTATAGTCTACCACGGCGGCTGAAAGC AACTTTACGTGATGGCTTTGGGGGGCATGCGAACCTACGCCGTAGATATT TATTTTTCGAGGTCTTACACGCGGGACAGGTCGCCTGAAAGTTTTTCTGC ACACATTCGCTTGTCTAGCTCGTCCCGCATCGAGCGTCGATATGTGCATC GCGCGGTGATAACTCAACAGGTGCGGACCTGCACGGCGGTTGATCATTTT TGGATAGCACACATCTACAATTAGTGCCGTCATTCGTCGTCGGGTGTCCG ACTGAAAATACACTCCAGAAACGTGTCTACGCCGCTACACCGCCGCATAC TCGGCGTTGCCTTGTAAGGTGACATCAGTTCTTGTAGCTCTCCGGCAGTG TTCACAGCCGACGACATCGTGTGCACGAGTCGTGTTGTTGTATTGGCTTC ATACCTCTCCGCTCCGCTCCATGAAACGAAACAAGCAGTCCTGCCGAGCC CGAGTAGAGCATTGCTACCGCACGCGGCTCATCCGATTCATTTTCGGCAG CCAAGGTGGTTATCCACGTTAGCTTTCTATTGTGGCGGCAAATTGCTCCT TCCTCCATCTCAAACCTCAAATCGTATCTACATACCCCGCTCTGCTCTGC TGCCGAGGAGGGGGAGGAGGAGGAGGTGTTCTCGTGCCCGAAACGCGCGC TTGAGTTTCGGCAACGTTTTTTTATTTTGCGTGCCGCTTTGCGTGGCAGG ATGTTCGGCGGACCTGTTGATTTAGACACGGCCCTCGACCTCGTCGCGAA AGGACCGCCGAGGTACAAGTGGACCACGTTTGGGGATAGAAACAAGGTAC GGCTCTCGTTCTTTATTTTCTTTTGGCGCCGTCGTCGTGTGTGAAGATTA GCAAGGGTTGGGGAGAGGCCTCAGAGTCGGCGCCGGCCGCTAAAAGTAGA CTTTGCTTGTTGCGGGAGGGAGCCCAAGAAACCGCGGCGAATTTACGCTA AGATAGAATCGTTCTTAGTATTAGTCGGTTTTGGTGATTTGGCAGCCCAG AACGTTGAACAAACCAGCCTTTCGAGGGTGCGAACAACATGGCACCTCAC TCTCCCCTGCGGGTAACAGGCTCAACCTCGTTAATACTTGCACAGCAGTG TAGATCGTGCTCTAAATGTTTGCGTGTGCGCCCGCTCTTCTTGCATGTAC CGTCTCTATTTTGAAACCAAGCTCCTGGAGGAAGCTTTCGAGGCCACGCA TGGCGGCTGGACACTGCTGGATGCCTACTCGCCGACAATACTGCGAGTAG ACTTCCACTCCTCGGAAGAAGACGGCCTGCACTACTGCTTGCCTGGGCCT ATTGACCACTGGGTGGTCCTGTTGTACAATATCCTCCTCGAGAAAGTGAA AAGTGACAGACGAGAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9963:666..4834-

>mRNA_Ecto-sp9_F_contig9963.18029.1 ID=mRNA_Ecto-sp9_F_contig9963.18029.1|Name=mRNA_Ecto-sp9_F_contig9963.18029.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2238bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9963:666..4834- (Ectocarpus species9 EcSCA_722f female)
GGGGATGGAAAGGATCCACCACGGCTTGTCGTCGTTGGGAAGGAAAGGGA
TCCAGCCCTTGTTGTCGACTATGCGAACGTCGAAACCGACCTCGGCTTGC
CGCCGTGCTACTCGAGCACGGCCGCTGATCCTTCCCAAGGGAGATGGAAC
GAGTGCGCAGGAGGCGTGGACGATTCCCCGGCAAATACGGGCAACTTCAC
CGGCCCGTGGAAAACCACTCGAACGGAGAAACGGGGGATGGAAAGGATCC
ACCACGGCTTGTCGTCGTTGGGAAGGAAAGGGATCCAGCCCTTGTTGTCG
ACTATGCGAACGTCGAAACCGACCTCGGCTTGCCGCCGTGCTACTCGAGC
ACGGCCGCTGATCCTTCCCAAGGGAGATGGAACGAGTGCGCAGGAGGCGT
GGACGATTCCCCGGCAAATACGGGCAACTTCACCGGCCCGTGGAAAACCA
CTCGAACGGAGAAACGCAGGTGTAGCGAAAGATGGTCAGCAGAGCATGAG
GGTGAAGGGCCCGTCCCCCCCATGCCGTACTGGAAGTGGGAGCCTTCGGC
GTGCCGGCTGGAGGAGGTGGACAAAGCCAAGTTCTGCCGCGTCATGGAGG
GGAGGAAGGGGTTGCTCTTCGCGGCAGGTGTAGCGAAAGATGGTCAGCAG
AGCATGAGGGTGAAGGGCCCGTCCCCCCCATGCCGTACTGGAAGTGGGAG
CCTTCGGCGTGCCGGCTGGAGGAGGTGGACAAAGCCAAGTTCTGCCGCGT
CATGGAGGGGAGGAAGGGGTTGCTCTTCGCGGGGGACAGCCTGACGGGTG
AGATGATCGATACTCTGGCGGCGGTTCTGCGCGCGACGCTCGTCAAGCAC
GTGCACCTGACCATGGACACCTACTCCGCCTGCGACGGAGCGCTGACGCT
GTCGTGGTACCGCAACGACTTCCTCGACACGCGAACGGACGGCTTCGACA
CGGTGCATTGCGAGGACCCCGACGTCAGCATGTCGCACTGCATGGTCTTT
GCAGGCATGTACAGCAGGGACAGCCTGACGGGTGAGATGATCGATACTCT
GGCGGCGGTTCTGCGCGCGACGCTCGTCAAGCACGTGCACCTGACCATGG
ACACCTACTCCGCCTGCGACGGAGCGCTGACGCTGTCGTGGTACCGCAAC
GACTTCCTCGACACGCGAACGGACGGCTTCGACACGGTGCATTGCGAGGA
CCCCGACGTCAGCATGTCGCACTGCATGGTCTTTGCAGGCATGTACAGCA
ATGATGCTACCTTGAGCCAGTTCGACACCCTCGTCGTGAACGCTGGGGCA
CACCTTCGATCGGGGGCGTTGGAGGCGTACGGGTCGATGATGAAGAGCGC
TAGTGAGAGCCTGACCTCGTCGATGAGACGGTTACACGGGGATAACGCCA
TCTTGGTGGTCAGGAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAGA
TGATGCTACCTTGAGCCAGTTCGACACCCTCGTCGTGAACGCTGGGGCAC
ACCTTCGATCGGGGGCGTTGGAGGCGTACGGGTCGATGATGAAGAGCGCT
AGTGAGAGCCTGACCTCGTCGATGAGACGGTTACACGGGGATAACGCCAT
CTTGGTGGTCAGGAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAGGA
TGTTCGGCGGACCTGTTGATTTAGACACGGCCCTCGACCTCGTCGCGAAA
GGACCGCCGAGGTACAAGTGGACCACGTTTGGGGATAGAAACAAGGATGT
TCGGCGGACCTGTTGATTTAGACACGGCCCTCGACCTCGTCGCGAAAGGA
CCGCCGAGGTACAAGTGGACCACGTTTGGGGATAGAAACAAGCTCCTGGA
GGAAGCTTTCGAGGCCACGCATGGCGGCTGGACACTGCTGGATGCCTACT
CGCCGACAATACTGCGAGTAGACTTCCACTCCTCGGAAGAAGACGGCCTG
CACTACTGCTTGCCTGGGCCTATTGACCACTGGGTGGTCCTGTTGTACAA
TATCCTCCTCGAGAAAGTGAAAAGTGACAGACGAGAGTAGCTCCTGGAGG
AAGCTTTCGAGGCCACGCATGGCGGCTGGACACTGCTGGATGCCTACTCG
CCGACAATACTGCGAGTAGACTTCCACTCCTCGGAAGAAGACGGCCTGCA
CTACTGCTTGCCTGGGCCTATTGACCACTGGGTGGTCCTGTTGTACAATA
TCCTCCTCGAGAAAGTGAAAAGTGACAGACGAGAGTAG
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