mRNA_Ecto-sp9_F_contig995.18015.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig995.18015.1
Unique NamemRNA_Ecto-sp9_F_contig995.18015.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N0_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 4.950e-159
Identity = 230/236 (97.46%), Postives = 232/236 (98.31%), Query Frame = 1
Query:   91 MAESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCR 798
            MAESIYNLLP+IKEETVKPPMYKATFDH RKVPYSTFDQRKAKGGMFGIK+GKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGS A WASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLK KWDDVNCR
Sbjct:    1 MAESIYNLLPEIKEETVKPPMYKATFDHSRKVPYSTFDQRKAKGGMFGIKEGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSSAGWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKAKWDDVNCR 236          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE5_9STRA)

HSP 1 Score: 176 bits (447), Expect = 8.830e-51
Identity = 113/277 (40.79%), Postives = 148/277 (53.43%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGM-KRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDNGRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E+I+NLLP+ + +  KPP Y++ FD +  VPYSTF  +   GG++G +DG  S +P  +L+ G G+                            +G P+      P    +RG  L     K  VP   ERP MG+ + KNF+T+NAV  ILAVP  R  P IDYL KED+G+VP YL Q+                         KEE+  MP +E+ EL+D LK+KWD VN RYQ L HQTFF+ GRL  K  LEK LD IEADI K+ KGP++V
Sbjct:    7 ETIFNLLPREEVKAEKPPRYRSLFDPKSPVPYSTF--KNTGGGVYGKRDGG-SHKPDVYLKRGTGS----------------------------AGGPSHTVRSTPEKRPERGEDLR----KAAVPLAKERPVMGVKADKNFITANAVNAILAVPKTRTPPTIDYLAKEDYGKVPAYLGQI-------------------------KEEVEPMPEDERLELLDALKSKWDAVNARYQKLCHQTFFERGRLEQKKSLEKMLDAIEADIEKIGKGPIMV 223          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.120e-45
Identity = 111/294 (37.76%), Postives = 155/294 (52.72%), Query Frame = 1
Query:   91 MAESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQ------------RKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEE-IPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVVVP 930
            M E+IY+L+P + +  VKPPMYK+  D    +  STF              +K   G FG        +P  FL+ G  T+                G G SG     SG  A+ + +GP          P   K  VPRR + P  G+ S  NFVT+NAV+TILAVP      P++YL+KED+G+VP YL QV++E+  EN M++ FVREQMG+     ++ + E+   E+ EL+  LK KWD VN +YQL+ H    D  G+L  K ++E +L  +E DI KL K PV++ P
Sbjct:    1 MPETIYSLVPHVPDVPVKPPMYKSRHDPVCVLAGSTFGAFGTTQPIGAAVLKKQASGTFGPPVEALRNDPAKFLKKGTKTQT---------------GTGASG--DKDSGGDAKSSKKGPAPAF----TYPGERKAMVPRRDDCPVTGIVSKANFVTANAVDTILAVPRRVDLEPVNYLEKEDYGKVPKYLQQVKSEITRENAMIDMFVREQMGLEVGDDDDHLEELRERERTELLHALKAKWDTVNKKYQLMAHMVNLDTFGKLRRKEQMETQLKGLEKDIEKLEKTPVLIRP 273          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDZ9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.010e-45
Identity = 111/297 (37.37%), Postives = 155/297 (52.19%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQR---KAKGGMFGIKDGKRST-------------EPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANR---RRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGI-SAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E IYNL+PK+  E VKP  Y++ FD + +   +TF  R   K +G   G                     +P+ F R GE +     + KR +   +V              S  ++   GP+             +PPV +R ++P MGL SAKN++T+NAVETILA+P NR   R     Y+KKEDFG+VP YL QV+ E+  EN M+EEFVR+   +     ++ + +M   E+  LVD LK+KWD VN +YQ L H   FD  G++  K   EKELD++E DI  L KG VV+
Sbjct:    5 ECIYNLIPKVHVEPVKPERYRSRFDPKVQPTGTTFGVRGKTKLEGANLGAAQKMEKPASARGFGRLPAKPDPKSFTRKGERSATAVVSRKRDDELIVVF-----------DSSAGKFNYPGPS-------------RPPVVKRDDKPIMGLKSAKNYITANAVETILAIPGNRARVRNEQPQYMKKEDFGQVPRYLGQVKDEIERENSMIEEFVRQNHDLMDEENRDRVEDMDENERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELDQLEKDIQLLEKGHVVI 277          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSX4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 8.210e-43
Identity = 110/284 (38.73%), Postives = 152/284 (53.52%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFD---QRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRP---PIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAI-AKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E IYNL+PK++ E VKP  Y++ +D   +   +TF    + K +G   G    +R  +P      G       R   +P+    +           RS S     S+ P     G      + +PPV ++ ++P MGL SAKNFVT+NAVETILAVP  R R    P  Y+ KED+G+VP YL+QV+ E+  EN M+EEFVR+   +     ++ +  M   E+  LVD LK+KWD VN +YQ L H   FD  G++  K  LEKEL ++E DI  L KG VVV
Sbjct:   63 ECIYNLIPKVRVEPVKPERYRSKYDPNVQPTGTTFGVCGKTKLEGANLG--SAQRYEKPASARGFG-------RLPAKPDPKGFIRK-------GERSASATAVVSKKP-----GKFTYSGQTRPPVVKKDDKPIMGLKSAKNFVTANAVETILAVPGYRARAKNEPPQYMTKEDYGQVPRYLSQVKDEIERENSMIEEFVRQNHNLMEDDGRDRVEPMDERERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETLEKELTQLEKDIQLLEKGHVVV 325          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1M7_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.500e-41
Identity = 106/294 (36.05%), Postives = 147/294 (50.00%), Query Frame = 1
Query:   91 MAESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTF------------DQRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTK-GPVVVVP 930
            M ESIY L+P+   E  KP MY++  D R  V  STF              +K     FG   GK + +P+ F ++           K   +P                  PA+     P       +      K  VP R E+P MGL +AKNF+T+NAVETIL VP  R +   DYL+K D+G+ P YLAQV+ E+  EN+M++ +VREQMG  +  + +  EM   E+ EL+D LK KW  VN +YQ + H    D  G++  K  +E EL  +E DI +L + GPV+V P
Sbjct:    1 MEESIYRLVPQEYVEVKKPAMYRSKHDPRAPVTGSTFGTHGNTQLVGAGSMKKKGASTFGPPLGKTAPDPKSFTKMHA---------KAQRVP------------------PAKDTQVTPFHYDYSAK----ERKTNVPLRDEKPVMGLRTAKNFITANAVETILQVPTLRGQTEPDYLRKADYGQTPSYLAQVKDEIHRENDMIDAYVREQMGYESTHQTQYEEMSEGERLELIDALKAKWGAVNQKYQKICHMVKLDTIGKVKRKEAMEAELRALEEDIERLERPGPVLVAP 263          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIL3_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.780e-40
Identity = 110/297 (37.04%), Postives = 147/297 (49.49%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQR---KAKGGMFGIKD-----------GKRST--EPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRR---PPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGI-SAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E IYNL+P+ + + VKP  Y++ FD   +   STF  R   K +G   G  +           G+  T  +P+ F+R GE +     + KR   P       G                                 KP V R+ E+P MGL SAKNFVT+NAVE+ILAVP +R R    P  Y+ K+D+G+VP YL+QV+ E+  EN M+EEFVR+   +     +     M   E+  LVD LK KWD VN +YQ L H   FD  G++  K   EKEL ++E DI  L KG VVV
Sbjct:    5 ECIYNLIPRPEVQPVKPERYRSKFDPHVQPTGSTFGVRGKTKLEGANLGAPERLAKPSSARGFGRVLTKPDPKSFIRKGERSATAVVSAKRTREPSSKFTYAGQ-------------------------------AKPAVVRKDEKPIMGLKSAKNFVTANAVESILAVPGHRARVVTEPPQYVSKQDYGQVPRYLSQVKDEIARENSMIEEFVRQNRNLLEEDGRGRAEPMDERERLALVDSLKAKWDHVNGKYQKLCHNVVFDTLGKVRRKETFEKELTQLERDIQLLEKGHVVV 270          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZX0_SAPPC)

HSP 1 Score: 150 bits (378), Expect = 5.450e-40
Identity = 105/285 (36.84%), Postives = 143/285 (50.18%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFD---QRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRR----PPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVVV 927
            E IYNL+PK+     KP  Y +T D + +   STF    + K  G   G +  K   E                 GK PE P     +            P R+   GP              K  V +  E+P MGL ++KNF+T+NAVE IL VP NR R    PP+ Y  K DFG+VP+YL +V+ E+  ENEM+EEFVR+   I A  + ++  +  +E+A+L+  LK KWD VN +YQ L H   FD  G++  K   EKEL ++E DI  L+KG V +V
Sbjct:    5 ECIYNLIPKVVVAPEKPKRYHSTHDPQTQPTASTFGLHGKTKLLGSNLGPEKPKSPPEKAKTF------------GKLPEQPNPKDFIKKQSKCKMPESKPTRFNYNGPK-------------KAAVVKADEKPVMGLKTSKNFITANAVEAILDVPGNRARAKKEPPV-YRHKPDFGKVPEYLGEVKQEIEQENEMIEEFVRQNKNILADQEPKVEPLDDDERAKLISALKAKWDHVNQKYQKLCHNVSFDTQGKVRRKETYEKELTQLEKDIELLSKGGVAIV 263          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD57_9STRA)

HSP 1 Score: 150 bits (378), Expect = 5.450e-40
Identity = 106/284 (37.32%), Postives = 146/284 (51.41%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFD---QRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRR----PPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E IYNL+PK+     KP  Y +T+D   +   STF    + K  G   G  + K  T P          +A +  GK PE P              +  S  +     PT             KP V +  E+P MGL ++KNFVT+NAVE IL VP  R R    PP+ Y  K D+G+VP+YL +V+ E+  EN+M+EEFVR+   + A  + ++  M   E+ +L+D LK KWD VN +YQ L H   FD  G++  K  LEKEL ++E DI  L++GPV V
Sbjct:    5 ECIYNLIPKVVVVPEKPKRYTSTYDPNTEPTASTFGLHGKTKLIGSNLG--ESKPRTPP----------QATKTFGKLPEKPDPKD--------FTKKQSKCKMPPSKPTKF-----TYDGAKKPAVVKVDEKPVMGLKTSKNFVTANAVEAILDVPGARARVKQVPPV-YRDKPDYGQVPEYLKEVKQEIEQENDMIEEFVRQNKNVMADQEPKVDVMDETERLQLIDALKAKWDHVNTKYQKLCHNVSFDTQGKVRRKETLEKELTQLEKDIQILSRGPVAV 262          
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Match: Enkurin (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSW0_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 2.160e-39
Identity = 114/286 (39.86%), Postives = 149/286 (52.10%), Query Frame = 1
Query:   97 ESIYNLLPKIKEETVKPPMYKATFDHRRKVPYSTFDQR---KAKGGMFGIKDGKRSTEPRHFLRVGEGTEARR--RAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRP---PIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIA-KEEIPEMPSEEQAELVDKLKTKWDDVNCRYQLLVHQTFFDN-GRLVAKARLEKELDEIEADIAKLTKGPVVV 924
            E IYNL+PK+  E VKP  Y++ FD + +   STF  R   K +G   G              +VG+   AR   R   +P+ PK     G     A  S  P ++   GPT             + PV +R ++P MGL SAKNFVT+NAVETILAVP NR R    P  Y+KKED+G+VP YL+QV+ E+  EN M+E              ++ +  M   E+  LVD LK+KWD VN +YQ L H   FD  G++  K   EKEL ++E DI  L KG VVV
Sbjct:  499 ECIYNLIPKVYVEPVKPERYRSKFDPQVQPTGSTFGVRGSTKLEGANLGAAQ-----------KVGKPASARGFGRLPAQPD-PKSFVRKGERSSSAVVSKKPGKFNYSGPT-------------RAPVVKRDDKPIMGLKSAKNFVTANAVETILAVPGNRARAKNEPPQYMKKEDYGQVPRYLSQVKDEIERENSMIEXXXXXXXXXXXXXXRDRVEPMDESERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIQLLEKGHVVV 759          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig995.18015.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Enkurin4.950e-15997.46domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Enkurin8.830e-5140.79domain-containing protein n=1 Tax=Tribonema minus ... [more]
Enkurin2.120e-4537.76domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Enkurin3.010e-4537.37domain-containing protein n=1 Tax=Phytophthora meg... [more]
Enkurin8.210e-4338.73domain-containing protein n=4 Tax=Phytophthora ker... [more]
Hypothetical6.500e-4136.05protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Enkurin3.780e-4037.04domain-containing protein n=1 Tax=Nothophytophthor... [more]
Enkurin5.450e-4036.84domain-containing protein n=3 Tax=Saprolegniaceae ... [more]
Enkurin5.450e-4037.32domain-containing protein n=1 Tax=Aphanomyces eute... [more]
Enkurin2.160e-3939.86domain-containing protein n=1 Tax=Phytophthora ram... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig995contigEcto-sp9_F_contig995:6949..12490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.8
Seed ortholog evalue6.7e-125
Seed eggNOG ortholog2880.D7G0N0
Preferred nameENKUR
GOsGO:0001669,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0012505,GO:0030141,GO:0031410,GO:0031514,GO:0031982,GO:0036126,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0097223,GO:0097228,GO:0097708,GO:0097729,GO:0099503,GO:0120025,GO:0120038
EggNOG free text desc.Enkurin, TRPC channel interacting protein
EggNOG OGs28KS9@1,2QT8E@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEnkurin
Ec32 orthologEc-07_001480.1
Exons7
Model size933
Cds size933
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931091.4278228-CDS-Ecto-sp9_F_contig995:6948..70861622931091.4278228-CDS-Ecto-sp9_F_contig995:6948..7086Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 6949..7086 +
1692279029.199046-CDS-Ecto-sp9_F_contig995:6948..70861692279029.199046-CDS-Ecto-sp9_F_contig995:6948..7086Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 6949..7086 +
1622931091.4458876-CDS-Ecto-sp9_F_contig995:8133..82241622931091.4458876-CDS-Ecto-sp9_F_contig995:8133..8224Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 8134..8224 +
1692279029.2126315-CDS-Ecto-sp9_F_contig995:8133..82241692279029.2126315-CDS-Ecto-sp9_F_contig995:8133..8224Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 8134..8224 +
1622931091.4634547-CDS-Ecto-sp9_F_contig995:8950..91731622931091.4634547-CDS-Ecto-sp9_F_contig995:8950..9173Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 8951..9173 +
1692279029.225038-CDS-Ecto-sp9_F_contig995:8950..91731692279029.225038-CDS-Ecto-sp9_F_contig995:8950..9173Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 8951..9173 +
1622931091.4755294-CDS-Ecto-sp9_F_contig995:9919..100851622931091.4755294-CDS-Ecto-sp9_F_contig995:9919..10085Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 9920..10085 +
1692279029.235469-CDS-Ecto-sp9_F_contig995:9919..100851692279029.235469-CDS-Ecto-sp9_F_contig995:9919..10085Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 9920..10085 +
1622931091.4913723-CDS-Ecto-sp9_F_contig995:10656..107521622931091.4913723-CDS-Ecto-sp9_F_contig995:10656..10752Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 10657..10752 +
1692279029.2453685-CDS-Ecto-sp9_F_contig995:10656..107521692279029.2453685-CDS-Ecto-sp9_F_contig995:10656..10752Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 10657..10752 +
1622931091.5126526-CDS-Ecto-sp9_F_contig995:11478..115611622931091.5126526-CDS-Ecto-sp9_F_contig995:11478..11561Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 11479..11561 +
1692279029.263082-CDS-Ecto-sp9_F_contig995:11478..115611692279029.263082-CDS-Ecto-sp9_F_contig995:11478..11561Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 11479..11561 +
1622931091.531552-CDS-Ecto-sp9_F_contig995:12354..124901622931091.531552-CDS-Ecto-sp9_F_contig995:12354..12490Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 12355..12490 +
1692279029.2734709-CDS-Ecto-sp9_F_contig995:12354..124901692279029.2734709-CDS-Ecto-sp9_F_contig995:12354..12490Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig995 12355..12490 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig995.18015.1prot_Ecto-sp9_F_contig995.18015.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig995 6949..12490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig995.18015.1

>prot_Ecto-sp9_F_contig995.18015.1 ID=prot_Ecto-sp9_F_contig995.18015.1|Name=mRNA_Ecto-sp9_F_contig995.18015.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=311bp
MFPAAVTSDRGGGRRPALFERERASGVDGGMAESIYNLLPKIKEETVKPP
MYKATFDHRRKVPYSTFDQRKAKGGMFGIKDGKRSTEPRHFLRVGEGTEA
RRRAGKRPELPKIVHGLGGSGGGAARSGSPARWASRGPTGMKRGLQLLPA
RMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKE
DFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQA
ELVDKLKTKWDDVNCRYQLLVHQTFFDNGRLVAKARLEKELDEIEADIAK
LTKGPVVVVP*
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mRNA from alignment at Ecto-sp9_F_contig995:6949..12490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig995.18015.1 ID=mRNA_Ecto-sp9_F_contig995.18015.1|Name=mRNA_Ecto-sp9_F_contig995.18015.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5542bp|location=Sequence derived from alignment at Ecto-sp9_F_contig995:6949..12490+ (Ectocarpus species9 EcSCA_722f female)
ATGTTTCCTGCTGCGGTGACAAGTGACCGGGGCGGGGGGAGACGGCCGGC ATTATTCGAGCGAGAACGAGCCTCTGGCGTGGACGGAGGAATGGCGGAGA GCATCTACAATCTGCTACCCAAAATAAAGGAGGAAACGGTACGTAGTGCG TTGCTGTCCTCCTATGCGGGATCTTTCGACTGGATGGAAGGGAGGGATGC CGAGGGGGCACGTGTGTTTCGATAGATACTCTCCGGGTGTGATGATCTGC CCAGCGTATGTCCAATCAAACTTATGTGCAGGTTTAGAATTGTTGACGTC GAACCAGTCAGCACGCATGGGAGTTGGCCATTGCTCTCGTGTGCTTTGCA GAAAATGAAGCCGGGCATCCCCAAGCGTAGGTACCCTTCGCTGATGCAAC AAAATAAGGTATCCAGAGTGTTGCTGTTGCCACCCTGTGGTATAAGTACT TCCGCGTGTACTCCCTTGGGGCTTGTTGAGTAGCATCCCGGTGATCTCAC CTCCCCTAGACCGACTCTCATTGCTCGAAAAGCCACACACCTAAGAGGCT GCCAATTTCCGAAAGGGGTGTGGTGCTGGGAGTATTTCTTCGAGAGCTTT CAATGCCCGTATTGGTCGGCGCTCGCCCCCTCTTGAGTCAGCGTAGGGAG TGGGCGATCCCTCGCACGCTACCGCTACCACGTCTCTACTCGTGCATGGG AGATTTGACGCGTCAATACGCCACCGACAGCGCAGAGTAAGTGGTCTTTG GCTGTAGATTGCAAGCTACTTAGTACGGGTGTTCCCTCGGTCAAACAGAC GGAATAAATCCCGACCATAGGACATCCAAGGTATACCCTCCGGCAATAGG GCATTGCAAGGCATACCCCTCCGGCCACAGGGCAAGGTATAGCAGACAAG ACAGTCCCTGGGTAGAGGCTCCCGACTCCTCGTCGTGGGGGCTCGGTGCC GGTGCTGCAGCCATGGTGTCGGGCGATCTGTTGTTCGAACGAACGACCTC GCTAATATAGGCTCAGCCAATGTAGACCACCCTGCCCCCCCTAGCCCCCC TCTCCGAAAGTAACTCCGGGCTTGAAGTCATCTCCGCTCCCTGTGCGCTC ATTCCTTCATCATTCCTTCGTCTCGGCGTCGGCTGGCGTACCCCGTGCGG CCCACGCTTTTGGGCTGACTGTTCGCTCGCGGCAGGTTAAGCCACCCATG TACAAGGCCACCTTCGACCACCGCCGAAAAGTGCCGTACTCGACCTTTGA CCAGAGGAAAGCCAAAGGCGGCATGTGTGAGTGGAGTGCTTGGATTTCTA TCGTTCGTTGTAGGAAGAAAACGGGTGCGTTGTATTATTTCTCTTTCACT CGAGCTTCTTTGGCCTCCTTTGGTTCCGTCTTGTTGTCCCATGCGATACT GCGCGGCCAGCTAGTCAATCAAAGACAAGCTTGAAAACTCGTGGGCGCTA GTCGCGTATCCCCGTGCATGTAAGATACTCCAAACCGATCAATGCGCATC AACACACCCAACGGCGTCGGGTATGGGCGTGGAAGAGCAGAGAATAGGTG CAGTATATGCCCGCCAACTTTCGAGGCAACATGCGAAAAATCTACGCGGC TACTGCGGGCGGTTCGTTCCCAATCTCCTAGCCTACTACTGGGGCATAGG AAGTGGGCTAAAAAGGCGGGAAGTGATAGTGATAGGATATGTACGGTAGG AGCTGCCTTTGGTAAAGTAGGAAGGAACGATTGGCCATCGGTGATCTGTC CTGTGGGAACAATGCTCCGTCCTCTCGAGAACACCTGGCCTTCCGCTATG GCATGCCAAACACGAGTACGCCCCCCACCCCCCCCCCCTGAAACACTTCT TAGACGTACAACGTGGTCCCTCTCCGTACGGTTTCCCGTCACGGGTTTGA AATCACGTCCAAACGATAACATCTACCAATATCGTATGCACAAGCGTATG CTACCAAACGTGACGTGTGTCGTTGAAACGGTCGTCGAATCCACTGCTGC AGTCGGGATCAAGGACGGGAAGAGGTCGACGGAGCCGAGACATTTTCTTC GGGTAGGGGAAGGCACGGAGGCGAGAAGGAGAGCCGGGAAACGGCCGGAA TTGCCGAAGATCGTCCACGGGCTTGGCGGTAGCGGCGGGGGCGCCGCGAG AAGCGGTTCTCCGGCGAGGTGGGCGTCTAGAGGGCCTACGGGAATGAAGC GCGGCTTGCAACTATTGCCGGCGAGGTGAGGAAACTTGTATGTTCTCCGC CGCGCATGTTGAACTGTGGATGTTGAACTGCGGGTGTTGTTGTTGTTGTT GTTGTTGCTGTTTTAGTTGTTGTCATGGTTATGGCTGTGGTTGTCGCGGT TGTAGGTTGTGGGCTTGTGGTGTTGGCGACGGTAAGCTGGGAGTGTAGCC CCGTAGGGGGGTAGATTGCTTTTCGGCTGTCGGGGGAAGTAAGGGTTGTG TGGGTTGTGGGTACGTACAATGCTTTCTCCTCACCAGCCGCTGAAAACTC CGGGACACGCGAAAAACAAACGGGTAGCGGTGGCGGTGGTGGCAATTGTA TGTGGGGAACTTCGCACAGTCTGTAGATGTGCTAACAACCGTTTCGGCGC ACTGTTTGTCCATATTGGTGTCTGTGTGTTCTGTCTGTCGGTTCGGCTGC TGATCGGCATCGTTCCTTCGTTCCTCCGTTCCTTCGCCATCATATGCGCC AATTCCGCAACAATATAGTGGAAATCAAACACGGACGCTCAATCAATCAA TATCCACTTGCAAGAAGTTGTACACGTGTGTGGCTCCCGGCTAAGAACCC CCAAAACAAGCTGCCTCTTACGGCCTGCTGTAGCGGGTGGTGTTGTACAC AGGGGTTACTCTCGGGGGCGCAAGGTTTTAGAAGGTTTCCAAGCGGTAGT GCTGCTTGTGAAACGTTCTCCCCCGTGAACTCTCTTTCTCTACGCATCAT CCCTGTGCTGTTCCCAAAAAGGATGAAACCACCAGTCCCCCGGCGGGGGG AGCGGCCGACGATGGGCCTGCACTCCGCCAAGAACTTCGTCACCTCCAAC GCGGTGGAGACTATCCTCGCCGTGCCCGCCAACCGCCGCCGACCACCGAT CGACTACCTCAAGAAGGAGGACTTCGGCAGGGTGCCGGTGAGGATAAGGG TTAGGGTTAGTGTCCCACCTTGTTCCGAACAGGTGGGGACGGGTGGGTTC AAGCAGAACCGCGCGGTTCGACCAGCCTCACGATCTGTTGCCCACGCCAC ACAGCGGCTGCTCGTCAAGCCTCAAATGAACGGAAAGCCCCGTGTCTTCC TCTTTGGTTGTTGGTTACGCTTTTTAAACGGAAGGATGAGTTTCATTCTA TGTATTTGTCACAGCTTGACAACAAGCCCTCCCTCACGGTCGCGTATGTC GAGGGGTGCGTTTTCGCCATCGCTGATTGGTAAATTACGCATGATCGAGG CTGAACGTTCGTGCCCGTCCACCCGTGCGGCCGACGGGGTAGGTGAAGCC ACGCTACTCGCGTTGGAGACAGATTGGGGGTGAAACCGAAAACGTACTCC ATCCTAGTGCCGCATGACAAGTGCCGACCAAGCGGTCATAGTTAAATTCA ACTGAATCAAGTTATTTTCGTCAGACGTGCTCATCTGCCAGTACGCACTG AACTACTTGTTTCTCTTTTTCGCTAATTTTTTTTTTGTGCTGCTATCGGC TGTGGTAGGACTACTTAGCGCAAGTTCAGGCCGAAGTTCGGGCCGAAAAC GAAATGGTGGAGGAGTTTGTACGGGAACAGATGGGCATCAGCGCAATCGC GAAGGTGAGAACAGCCACCAATCTGCTCAAAAGAGTGCAGAAAAACGTGT TCTTCGGTTGGTTGACAGGTGTCGAAGGGGGGGGGGGCTGGTTTCGTGGG CAGGAAAGAGGATACAGAGGAGATACTATCGCGCTGCTGCGTACCTGGGG AGAGATGATACTTTTTTTCTGTCCCTCTGTAAGGGTTGCCTCAGAACCGC GATCGCCCTGGAGGGATGGGCTGGCCCGCGCCCGCGAGGCGGGGGAGGTA ATGTTCTTTTGTAAGGCCTAGTGTGGAGCGTCCCCTCTAAAGCAGGATCA TAAAACGCCCCCTTACACCTAACCTCGGTGATGATCATCTATCAACCAAC CCTTTCTAGGCCGTCCGTTGGGCTGACAGTTTCGGGATGAATCCAACTTT CACGACATTTGTGCGTTTGAATAGTTGGAACCATGCACTGCAATATGTTG ACAGCGGTTTGAACTACAAGGTACGATTCCTAGGAGAGTTGATCCCATTA CAGTAGGAGAAAAGGACGGCGATCGGTCAGTATTTCGGCGTTGGCGACGT AAACCACTTGAATCTGGAGTTTCAGCTGCTGTGTGGATTGATGCAAGGAA GAACGTTGGGAGAACTACCGCTCGACTGCTGCTGCTATAAGCGTACCATC GCCGCTTGTTCCAAGAAGAAAACTCAACACGTGACTCTCGTACATGGGAC AATACAAAATTCCGGTATACGACGACACAGGAGGAAATCCCAGAAATGCC GAGCGAGGAACAGGCGGAGCTGGTGGACAAGCTCAAGACAAAATGGGACG ATGTCAATTGCAGGTATCGATCGGATCGATATTTTCTATTGGCTCAATGG AATTGATGGATGGCGAACCAGTAGCACACAAGGAATAGCAATAATTAGGC AGTTTTTGTTTGGTCGAGCCCACACTTACCCTTAGTGCCACTTGGAAAGA AGCCCCCCAACAACTATGGCGATAGCCGGTGTTGAAAGCGGTGGTTTTGC TTGATATATGTATTGGCAATGGGCAACATATACACCTTGAAACGAGAGTG TGGAAAACTTCGGGAAAGCGAGACTGACATGAAAGCCGACATATTTCCAC GGGAAGCAGCTCGGGCTAGAATGACGTGGAACACTGCTCAATAATGGGTC AGCAGTTCGACTCAAGGGTGCTCGAGGCATCTGTGGATTGAGTACCCAAG TCACTCCGGTGTGATCAAAACCTCCAAGTTGGAGCACCCGCCTGTTCACA GGTTGAGCCGCCGCCCTGGATAGCTTCTTCTGCCTCTTGGTACAATCGTC ATTTCTCCCGTAACCCGCCTCACCCTCGTTCAGAACATGACTCCTAAAGG CGAACTACGGCGAGTACATTCGCTTGGACGTCTAGTCTAAACGCTTGAAT GCCTCGGTGTCGCTTGAATTTTTCGGTTAAGAGTTTAGGATATCAGTTCG CCTAATCTTGCTGTATCCAGGGGAACGGCCTACATACATTATACGTGAGG ATTAATAGACAAGCACCATTTTAGTCGAGGCTTCCCACCACCTTCCCCCT CATTATCACGACCAACAACATCTACCCGTCACCGCCACCGCCACCGCCAC CAACAGATACCAGCTATTGGTCCACCAGACTTTTTTCGACAATGGGCGAC TAGTGGCGAAGGCGCGCTTGGAAAAGGAGCTGGATGAGATAGAAGCCGAC ATAGCGAAGCTCACCAAAGGCCCCGTTGTCGTCGTACCATGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig995:6949..12490+

>mRNA_Ecto-sp9_F_contig995.18015.1 ID=mRNA_Ecto-sp9_F_contig995.18015.1|Name=mRNA_Ecto-sp9_F_contig995.18015.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1866bp|location=Sequence derived from alignment at Ecto-sp9_F_contig995:6949..12490+ (Ectocarpus species9 EcSCA_722f female)
ATGTTTCCTGCTGCGGTGACAAGTGACCGGGGCGGGGGGAGACGGCCGGC
ATTATTCGAGCGAGAACGAGCCTCTGGCGTGGACGGAGGAATGGCGGAGA
GCATCTACAATCTGCTACCCAAAATAAAGGAGGAAACGATGTTTCCTGCT
GCGGTGACAAGTGACCGGGGCGGGGGGAGACGGCCGGCATTATTCGAGCG
AGAACGAGCCTCTGGCGTGGACGGAGGAATGGCGGAGAGCATCTACAATC
TGCTACCCAAAATAAAGGAGGAAACGGTTAAGCCACCCATGTACAAGGCC
ACCTTCGACCACCGCCGAAAAGTGCCGTACTCGACCTTTGACCAGAGGAA
AGCCAAAGGCGGCATGTGTTAAGCCACCCATGTACAAGGCCACCTTCGAC
CACCGCCGAAAAGTGCCGTACTCGACCTTTGACCAGAGGAAAGCCAAAGG
CGGCATGTTCGGGATCAAGGACGGGAAGAGGTCGACGGAGCCGAGACATT
TTCTTCGGGTAGGGGAAGGCACGGAGGCGAGAAGGAGAGCCGGGAAACGG
CCGGAATTGCCGAAGATCGTCCACGGGCTTGGCGGTAGCGGCGGGGGCGC
CGCGAGAAGCGGTTCTCCGGCGAGGTGGGCGTCTAGAGGGCCTACGGGAA
TGAAGCGCGGCTTGCAACTATTGCCGGCGAGTCGGGATCAAGGACGGGAA
GAGGTCGACGGAGCCGAGACATTTTCTTCGGGTAGGGGAAGGCACGGAGG
CGAGAAGGAGAGCCGGGAAACGGCCGGAATTGCCGAAGATCGTCCACGGG
CTTGGCGGTAGCGGCGGGGGCGCCGCGAGAAGCGGTTCTCCGGCGAGGTG
GGCGTCTAGAGGGCCTACGGGAATGAAGCGCGGCTTGCAACTATTGCCGG
CGAGGATGAAACCACCAGTCCCCCGGCGGGGGGAGCGGCCGACGATGGGC
CTGCACTCCGCCAAGAACTTCGTCACCTCCAACGCGGTGGAGACTATCCT
CGCCGTGCCCGCCAACCGCCGCCGACCACCGATCGACTACCTCAAGAAGG
AGGACTTCGGCAGGGTGCCGGATGAAACCACCAGTCCCCCGGCGGGGGGA
GCGGCCGACGATGGGCCTGCACTCCGCCAAGAACTTCGTCACCTCCAACG
CGGTGGAGACTATCCTCGCCGTGCCCGCCAACCGCCGCCGACCACCGATC
GACTACCTCAAGAAGGAGGACTTCGGCAGGGTGCCGGACTACTTAGCGCA
AGTTCAGGCCGAAGTTCGGGCCGAAAACGAAATGGTGGAGGAGTTTGTAC
GGGAACAGATGGGCATCAGCGCAATCGCGAAGGACTACTTAGCGCAAGTT
CAGGCCGAAGTTCGGGCCGAAAACGAAATGGTGGAGGAGTTTGTACGGGA
ACAGATGGGCATCAGCGCAATCGCGAAGGAGGAAATCCCAGAAATGCCGA
GCGAGGAACAGGCGGAGCTGGTGGACAAGCTCAAGACAAAATGGGACGAT
GTCAATTGCAGGAGGAAATCCCAGAAATGCCGAGCGAGGAACAGGCGGAG
CTGGTGGACAAGCTCAAGACAAAATGGGACGATGTCAATTGCAGATACCA
GCTATTGGTCCACCAGACTTTTTTCGACAATGGGCGACTAGTGGCGAAGG
CGCGCTTGGAAAAGGAGCTGGATGAGATAGAAGCCGACATAGCGAAGCTC
ACCAAAGGCCCCGTTGTCGTCGTACCATGAATACCAGCTATTGGTCCACC
AGACTTTTTTCGACAATGGGCGACTAGTGGCGAAGGCGCGCTTGGAAAAG
GAGCTGGATGAGATAGAAGCCGACATAGCGAAGCTCACCAAAGGCCCCGT
TGTCGTCGTACCATGA
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