mRNA_Ecto-sp9_F_contig992.17989.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig992.17989.1
Unique NamemRNA_Ecto-sp9_F_contig992.17989.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G582_ECTSI)

HSP 1 Score: 919 bits (2375), Expect = 0.000e+0
Identity = 466/472 (98.73%), Postives = 469/472 (99.36%), Query Frame = 3
Query:   51 MKDALPQQQVLRNESHEHVPSVEEELDEYMMLREVSGQYPREDEARSYIVKRRQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRFGPALHHFFGRIEAGSDRVAKVASSIRGRGSGPPYAAGDHREPLLDLAEEGDQEDRGFYDRRRMEAGRGAQGRRDHMKKVPKPVDDEWEM 1466
            MKDALPQQQVLRNESHEHVPSVEEELDEYMMLREVSGQYPREDEARSYIVKRRQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTIT EQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGS+SGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFL+CIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVP+GNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRFGPALHHFFGRIEAGSDRVAKVASSIRGRGSGPPYAAGDHREPLLDLAEEGDQ DRGFYDRRRMEAGRGAQGRRDH KKVPKPVDDEWEM
Sbjct:    1 MKDALPQQQVLRNESHEHVPSVEEELDEYMMLREVSGQYPREDEARSYIVKRRQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITPEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSSSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLVCIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPLGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRFGPALHHFFGRIEAGSDRVAKVASSIRGRGSGPPYAAGDHREPLLDLAEEGDQGDRGFYDRRRMEAGRGAQGRRDHTKKVPKPVDDEWEM 472          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD62_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 1.300e-156
Identity = 243/374 (64.97%), Postives = 289/374 (77.27%), Query Frame = 3
Query:  222 LLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRFGPALHHFFGRIEAGSDRVAKVASSIRGRGSGPPYAAGDHREPLLDLAE 1343
            +LSF AMVFVSL NK+ QKLET+PM NYPNFLNLFTTFVYIPFSFAYI+PM+R G  IT +Q  VPKRVFAVMGALDGVSGIMQIFA+TYL G L+ILLTQ+AIPISM  SKRL  ARYS++QY GA  VA GI++ +GPS+A   + G G    WS V++ SC+PMALSSVYKE+ALGESELDPIYLNGWVA+FQF + +PLA+PAA+AGDP + PL LP+N+WDG  CY+G +SV  G + D+CWP  PLYVTLYL+ NITYNILI LILKYG AN+LF+AMTI VP+GN  FALPF+PGH PL +TDI+GL  +M GLVLYRFG +L            R+A+ A+      S    AA + R PLLD+ E
Sbjct:    1 MLSFVAMVFVSLGNKIMQKLETVPMRNYPNFLNLFTTFVYIPFSFAYIVPMVRCGSAITPDQLRVPKRVFAVMGALDGVSGIMQIFAATYLSGPLVILLTQSAIPISMAISKRLLRARYSLTQYMGAFTVALGILVVLGPSMA---DGGAGGSFGWSTVMILSCVPMALSSVYKEIALGESELDPIYLNGWVAIFQFAVSLPLALPAAMAGDPRVDPLHLPENIWDGLKCYVGVDSVEEGPYEDHCWPGGPLYVTLYLIFNITYNILIILILKYGSANILFMAMTITVPLGNAAFALPFIPGHTPLQSTDIIGLFAIMGGLVLYRFGASL----------CPRLARAAAPATKGDSND--AAKERRRPLLDIDE 359          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLH6_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 1.090e-138
Identity = 208/330 (63.03%), Postives = 265/330 (80.30%), Query Frame = 3
Query:  219 LLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQE---LVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            LL+SF AM+FV L NK+FQKL+TIPM NYP FLN+ TTFVYIP SFAYI+PM++YG  IT EQ ++PKR FAVMGALD VSGIMQ+FA+TYLGGSL+ILL QAAIP+SM+ S+ L   +YSV QY GA VV+ G++I +GPSL+  S + G      ++WS+V++ASC+PM LSSVYKE ALGE+ELDP+YLNGW+AVFQ L+ +PL VPAALAGDP + P +LP +L DG+ CY+G N+++ G HPD+C   + L+VT YL+ N+ YN+LI LILK+G AN+L+LAMTI VP+GNV F LPF+P HQPLHA+D+ GL F+M GL +YRF
Sbjct:   13 LLVSFVAMIFVGLGNKIFQKLQTIPMRNYPTFLNILTTFVYIPVSFAYIVPMIKYGSAITWEQRNIPKRKFAVMGALDSVSGIMQVFAATYLGGSLLILLGQAAIPVSMLISRALLQTKYSVYQYVGAVVVSTGLLIVLGPSLSGSSGASGSDPHAVVLWSVVMIASCVPMCLSSVYKEKALGEAELDPVYLNGWIAVFQLLMALPLTVPAALAGDPPVRPADLPASLADGFKCYMGQNTIVDGPHPDDC-AKATLFVTTYLLFNVAYNLLIVLILKFGSANILWLAMTIMVPLGNVAFTLPFMPEHQPLHASDVAGLAFIMLGLFVYRF 341          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Aste57867_403 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7Q2_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 2.290e-138
Identity = 205/331 (61.93%), Postives = 266/331 (80.36%), Query Frame = 3
Query:  213 RGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQE--LVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            R L L F A++ V L NK+FQKL+TIPM+NYPNF+NL  TFVYIP SFAYI+PM++YG  IT EQ ++PKR FA+MGALD V+GI+Q+FA+TYLGGSL+ILL QAAIP+SMV SK L  + YS  QYTGA VVA GI++ +GPS+   S SGG     +VWS V++ SC+PM LSSVYKE+ALGE+ELD +YLNGW+AVFQFL+ IPLA+PAA+ G P + P +LP NL+DGW+CYLG+N++  G+HPD+C   +PLYVT+Y++ N+ YN+LI L+LK+G AN+L+LAMTI VP+GNV F  PF+P H+PLH TD++GL+ +M GL +YRF
Sbjct:    9 RRLPLVFMALIVVGLGNKIFQKLQTIPMHNYPNFINLLCTFVYIPLSFAYILPMIKYGKAITLEQRAIPKRKFAIMGALDSVAGILQVFAATYLGGSLLILLGQAAIPVSMVISKFLLKSSYSWFQYTGALVVAVGILVVLGPSM---SESGGDSHNVVVWSAVMIGSCIPMCLSSVYKEIALGEAELDAVYLNGWIAVFQFLLSIPLAIPAAMIGSPPVVPKDLPTNLYDGWLCYLGHNTITGGDHPDDC-KMAPLYVTIYMIFNVGYNLLIILMLKFGSANILWLAMTIMVPLGNVAFTFPFMPEHKPLHTTDVIGLVVIMLGLFVYRF 335          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X121_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 1.090e-135
Identity = 201/329 (61.09%), Postives = 262/329 (79.64%), Query Frame = 3
Query:  213 RGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            R L L F A+V + L NK+FQKL+TIPM+NYPNF+NL +TFVYIP SFAYIIPM++YG  IT +Q ++PKR FA+MGALD V+GI+Q+FA+TYLGGSL+ILL QAAIP+SM  SK +   +YS+ QY GA VVA GI++ +GPS+    + G    +VWS V++ SC+PM LSSVYKE+ALGE+ELD +YLNGW+AVFQFL+ IPLAVPAA+ G P +SP +LPKNL+DG  CYLG+N+++ G HPD+C   + L+VT+YL  N+ YN+LI L+LK+G AN+L+LAMTI VP+GNV F  PF+P HQPL  TD++GL+ +MTGL +YRF
Sbjct:    9 RRLPLVFLALVVIGLGNKIFQKLQTIPMHNYPNFINLLSTFVYIPLSFAYIIPMIKYGKAITMDQQNIPKRKFAIMGALDSVAGILQVFAATYLGGSLLILLGQAAIPVSMAISKIILKTKYSLYQYVGALVVAIGIIVVLGPSMR-SMDGGDHNTIVWSAVMIISCIPMCLSSVYKEIALGEAELDAVYLNGWIAVFQFLLSIPLAVPAAMIGSPPVSPKDLPKNLYDGMRCYLGHNTILDGPHPDDC-EKATLFVTIYLFFNVGYNLLIILMLKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLKTTDVVGLVVIMTGLFVYRF 335          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL75_PYTOL)

HSP 1 Score: 415 bits (1066), Expect = 1.370e-133
Identity = 199/331 (60.12%), Postives = 259/331 (78.25%), Query Frame = 3
Query:  207 RQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            R   L++SF AMVFV L NK+FQKL+TIPM+NYP FLNL TTFVYIP SFAYIIPM++YG  ITAEQ SVPK+ FAVMG LD V+GI+Q+FA+TYLGGSLIILL QAAIP+SMV S  L   RYS+ QY GA VV  G+++ +GP +   + +     +VWSMV++ SC+PM LSSVYKE ALGE+ELD +YLNGWVAVFQF++ +PL +PAA+ G+P + P ++  NL+DG+ CYLG+N++  G H D+C  ++ ++V+ Y++ N+ YN+LI LILK+G AN+L+LAMTI VP+GNV F  PF+P HQPLHA DI GL+ +M+GL +YRF
Sbjct:    9 RSSKLVVSFVAMVFVGLGNKIFQKLQTIPMHNYPMFLNLLTTFVYIPISFAYIIPMIKYGTAITAEQRSVPKKTFAVMGGLDSVAGILQVFAATYLGGSLIILLGQAAIPVSMVISSALLQTRYSIYQYVGAVVVTIGLIVVLGPGVDSSAGADSHMTIVWSMVMILSCVPMCLSSVYKEKALGETELDVVYLNGWVAVFQFMMALPLTIPAAMIGNPPVEPKDIMSNLYDGFRCYLGHNTIDHGPHKDDC-ANATVFVSAYIVFNVAYNLLIILILKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLHAKDITGLLVIMSGLFVYRF 338          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H164_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 3.670e-133
Identity = 196/330 (59.39%), Postives = 263/330 (79.70%), Query Frame = 3
Query:  210 QRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            +R L L F A+V + L NK+FQKL+TIPM+NYPNF+NL +TFVYIP SFAYI+PM++YG+ IT +Q  +PKR FAVMGALD V+GI+Q+FA+TYLGGSL+ILL QAAIP+SMV SK L    YS  QY GA VVA GI++ +GPS+    + G     VW+ V++ASC+PM LSSVYKE+ALG++ELD +YLNGW+AVFQF++ IPL++PAA+ G P + P +LP+NL+DG  CY+G+N+++ G HPD+C   + L+VT+Y++ N+ YN+LI L+LK+G AN+L+LAMTI VP+GNV F  PF+P HQPLH TD++GL+ +MTGL +YRF
Sbjct:    8 ERRLPLVFMALVVIGLGNKIFQKLQTIPMHNYPNFINLLSTFVYIPLSFAYILPMIKYGNAITVDQRRIPKRKFAVMGALDSVAGILQVFAATYLGGSLLILLGQAAIPVSMVISKVLLKTSYSWFQYVGALVVAVGILVVLGPSMR-SVDGGDHNTAVWAAVMIASCVPMCLSSVYKEIALGQAELDAVYLNGWIAVFQFILSIPLSIPAAMIGSPPVPPRDLPQNLYDGMRCYMGHNTIVDGPHPDDC-DKATLFVTIYILFNVGYNLLIILMLKFGSANLLWLAMTIMVPLGNVAFTFPFMPEHQPLHTTDVVGLVVIMTGLFVYRF 335          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNK8_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 1.540e-132
Identity = 198/336 (58.93%), Postives = 264/336 (78.57%), Query Frame = 3
Query:  198 VKRRQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQE--LVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            V   +R L L F A+V + L NK+FQKL+TIPM+NYPNF+NL +TFVYIP SFAYI+PM++YG+ IT +Q  +PK  FAVMGALD V+GI+Q+FA+TYLGGSL+ILL QAAIP+SM  SK L   +YS  QY GA VVA GI++ +GPS+    +SGGG    ++WS V++ASC+PM LSSVYKE+ALG++ELD +YLNGW+AVFQF++ IPL+ PAA+ G P + P +LPKNL+DG  CY+G+N+++ G HPD+C   + L+VT+Y+  N+ YN+LI L+LK+G AN+L+LAMTI VP+GNV F  PF+P HQPLH TD++GL+ +M GL +YRF
Sbjct:    4 VDNNERRLPLVFMALVVIGLGNKIFQKLQTIPMHNYPNFINLLSTFVYIPLSFAYILPMIKYGNAITVDQRRIPKCKFAVMGALDSVAGILQVFAATYLGGSLLILLGQAAIPVSMGISKFLLKTKYSWYQYVGAVVVAVGILVVLGPSM---RSSGGGDHSTVLWSAVMIASCIPMCLSSVYKEIALGQAELDAVYLNGWIAVFQFILSIPLSFPAAMIGSPPVRPHDLPKNLYDGMQCYMGHNTILDGPHPDDC-EKATLFVTIYIFFNVGYNLLIILMLKFGSANLLWLAMTIMVPLGNVAFTFPFMPEHQPLHTTDVVGLVVIMVGLFVYRF 335          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3GRN7_PHYRM)

HSP 1 Score: 409 bits (1051), Expect = 2.390e-131
Identity = 205/329 (62.31%), Postives = 255/329 (77.51%), Query Frame = 3
Query:  219 LLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELV--WSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            LL+SF AMVFV L NK+FQKL+TIPM+NYP FLNL TTFVYIP SFAYI+PM++YG  IT +Q S+PKR FAVMG LD V+GI+Q+FA+TYLGGSLIILL QAAIPISM+ S  L  A+YS  QY GA VV  G++I +G   + GS+SG    L+  WS+V++ SC+PM LSSVYKE  LGE+ELD +YLNGW+AVFQFL  IPL  PAA+ GD  ++P ELP+N++DG MCYLG N++  G H D+C   + +YVT YL+ N+ YN+LI LILK+G AN+L+LAMTI VP+GNV F  PF+P HQPLH  DI GL+F+M GL +YRF
Sbjct:   13 LLVSFVAMVFVGLGNKIFQKLQTIPMHNYPTFLNLLTTFVYIPISFAYILPMIKYGSAITWDQRSIPKRKFAVMGGLDSVAGILQVFAATYLGGSLIILLGQAAIPISMLISSLLLKAKYSGYQYVGAMVVTLGLLIVLGSGDS-GSSSGTNPHLIVLWSVVMIFSCVPMCLSSVYKEKTLGEAELDAVYLNGWIAVFQFLCAIPLTFPAAMVGDHPVTPSELPENMYDGLMCYLGQNTITEGAHKDDC-EKATIYVTAYLLFNVAYNLLIILILKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLHTKDIAGLLFIMLGLFVYRF 339          
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYX5_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 5.360e-130
Identity = 201/332 (60.54%), Postives = 252/332 (75.90%), Query Frame = 3
Query:  207 RQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPFSFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGGSLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLAVGSNSGGGQELV-WSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVAVFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHPDNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNVIFALPFVPGHQPLHATDILGLIFVMTGLVLYRF 1199
            R   LL+SF AMVFV L NK+FQKL+TIPM+NYP FLNL TTFVYIP SFAYI+PM++YG  IT +Q ++PKR FAVMG LD ++GI+Q+FA+TYLGGSLIILL QAAIPISM+ S  L  A+YS  QY GA  V  G++I +G              +V WS+V++ SC+PM LSSVYKE  LGE+ELD +YLNGW+AVFQFL  IPL  PAA+ GD  ++P ELP+NL+DG MCYLG ++++ G H D+C   + +YVT YL+ N+ YN+LI LILK+G AN+L+LAMTI VP+GNV F  PF+P HQPLHA DI GL+F+MTGL +YRF
Sbjct:    8 RDMKLLVSFVAMVFVGLGNKIFQKLQTIPMHNYPTFLNLLTTFVYIPISFAYILPMIKYGSAITWDQRNIPKRKFAVMGGLDSIAGILQVFAATYLGGSLIILLGQAAIPISMLISSLLLNAKYSSYQYIGAVTVTLGLLIVLGSGXXXXXXXASSHLIVLWSIVMIFSCVPMCLSSVYKEKTLGEAELDAVYLNGWIAVFQFLFSIPLTFPAAMVGDHPVTPSELPENLYDGLMCYLGQDTIIDGPHKDDC-EKATVYVTAYLLFNVVYNLLIILILKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLHAKDIAGLVFIMTGLFVYRF 338          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig992.17989.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+098.73protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.300e-15664.97protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.090e-13863.03protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Aste57867_4032.290e-13861.93protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized1.090e-13561.09protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized1.370e-13360.12protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized3.670e-13359.39protein n=12 Tax=Aphanomyces astaci TaxID=112090 R... [more]
Uncharacterized1.540e-13258.93protein n=2 Tax=Aphanomyces invadans TaxID=157072 ... [more]
Uncharacterized2.390e-13162.31protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3G... [more]
Uncharacterized5.360e-13060.54protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig992contigEcto-sp9_F_contig992:14169..21773 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score926.8
Seed ortholog evalue4.1e-267
Seed eggNOG ortholog2880.D7G582
EggNOG free text desc.Crt homolog
EggNOG OGs28IU4@1,2QR5M@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTransmembrane transporter protein, chloroquine resistant
Ec32 orthologEc-14_006570.1
Exons9
Model size2818
Cds size1419
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig992.17989.1prot_Ecto-sp9_F_contig992.17989.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig992 14219..20424 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931087.7251725-UTR-Ecto-sp9_F_contig992:14168..142181622931087.7251725-UTR-Ecto-sp9_F_contig992:14168..14218Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig992 14169..14218 +
1692279027.5296624-UTR-Ecto-sp9_F_contig992:14168..142181692279027.5296624-UTR-Ecto-sp9_F_contig992:14168..14218Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig992 14169..14218 +
1622931087.8727074-UTR-Ecto-sp9_F_contig992:20424..217731622931087.8727074-UTR-Ecto-sp9_F_contig992:20424..21773Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig992 20425..21773 +
1692279027.6716812-UTR-Ecto-sp9_F_contig992:20424..217731692279027.6716812-UTR-Ecto-sp9_F_contig992:20424..21773Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig992 20425..21773 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931087.7381406-CDS-Ecto-sp9_F_contig992:14218..143201622931087.7381406-CDS-Ecto-sp9_F_contig992:14218..14320Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 14219..14320 +
1692279027.5477633-CDS-Ecto-sp9_F_contig992:14218..143201692279027.5477633-CDS-Ecto-sp9_F_contig992:14218..14320Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 14219..14320 +
1622931087.7507799-CDS-Ecto-sp9_F_contig992:14820..149461622931087.7507799-CDS-Ecto-sp9_F_contig992:14820..14946Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 14821..14946 +
1692279027.5671382-CDS-Ecto-sp9_F_contig992:14820..149461692279027.5671382-CDS-Ecto-sp9_F_contig992:14820..14946Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 14821..14946 +
1622931087.7653973-CDS-Ecto-sp9_F_contig992:15261..153221622931087.7653973-CDS-Ecto-sp9_F_contig992:15261..15322Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 15262..15322 +
1692279027.5788076-CDS-Ecto-sp9_F_contig992:15261..153221692279027.5788076-CDS-Ecto-sp9_F_contig992:15261..15322Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 15262..15322 +
1622931087.779629-CDS-Ecto-sp9_F_contig992:16020..162051622931087.779629-CDS-Ecto-sp9_F_contig992:16020..16205Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 16021..16205 +
1692279027.5927992-CDS-Ecto-sp9_F_contig992:16020..162051692279027.5927992-CDS-Ecto-sp9_F_contig992:16020..16205Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 16021..16205 +
1622931087.7927356-CDS-Ecto-sp9_F_contig992:16605..167451622931087.7927356-CDS-Ecto-sp9_F_contig992:16605..16745Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 16606..16745 +
1692279027.6081636-CDS-Ecto-sp9_F_contig992:16605..167451692279027.6081636-CDS-Ecto-sp9_F_contig992:16605..16745Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 16606..16745 +
1622931087.8094535-CDS-Ecto-sp9_F_contig992:17232..173581622931087.8094535-CDS-Ecto-sp9_F_contig992:17232..17358Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 17233..17358 +
1692279027.620215-CDS-Ecto-sp9_F_contig992:17232..173581692279027.620215-CDS-Ecto-sp9_F_contig992:17232..17358Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 17233..17358 +
1622931087.8286128-CDS-Ecto-sp9_F_contig992:18673..189141622931087.8286128-CDS-Ecto-sp9_F_contig992:18673..18914Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 18674..18914 +
1692279027.6329305-CDS-Ecto-sp9_F_contig992:18673..189141692279027.6329305-CDS-Ecto-sp9_F_contig992:18673..18914Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 18674..18914 +
1622931087.842176-CDS-Ecto-sp9_F_contig992:19382..194421622931087.842176-CDS-Ecto-sp9_F_contig992:19382..19442Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 19383..19442 +
1692279027.6501791-CDS-Ecto-sp9_F_contig992:19382..194421692279027.6501791-CDS-Ecto-sp9_F_contig992:19382..19442Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 19383..19442 +
1622931087.8573275-CDS-Ecto-sp9_F_contig992:20046..204241622931087.8573275-CDS-Ecto-sp9_F_contig992:20046..20424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 20047..20424 +
1692279027.6619155-CDS-Ecto-sp9_F_contig992:20046..204241692279027.6619155-CDS-Ecto-sp9_F_contig992:20046..20424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig992 20047..20424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig992.17989.1

>prot_Ecto-sp9_F_contig992.17989.1 ID=prot_Ecto-sp9_F_contig992.17989.1|Name=mRNA_Ecto-sp9_F_contig992.17989.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=473bp
MKDALPQQQVLRNESHEHVPSVEEELDEYMMLREVSGQYPREDEARSYIV
KRRQRGLLLSFTAMVFVSLANKVFQKLETIPMYNYPNFLNLFTTFVYIPF
SFAYIIPMMRYGDTITAEQTSVPKRVFAVMGALDGVSGIMQIFASTYLGG
SLIILLTQAAIPISMVTSKRLTGARYSVSQYTGATVVAAGIVIAIGPSLA
VGSNSGGGQELVWSMVLVASCLPMALSSVYKEMALGESELDPIYLNGWVA
VFQFLICIPLAVPAALAGDPAISPLELPKNLWDGWMCYLGYNSVMIGEHP
DNCWPDSPLYVTLYLMVNITYNILITLILKYGGANVLFLAMTICVPMGNV
IFALPFVPGHQPLHATDILGLIFVMTGLVLYRFGPALHHFFGRIEAGSDR
VAKVASSIRGRGSGPPYAAGDHREPLLDLAEEGDQEDRGFYDRRRMEAGR
GAQGRRDHMKKVPKPVDDEWEM*
back to top

mRNA from alignment at Ecto-sp9_F_contig992:14169..21773+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig992.17989.1 ID=mRNA_Ecto-sp9_F_contig992.17989.1|Name=mRNA_Ecto-sp9_F_contig992.17989.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7605bp|location=Sequence derived from alignment at Ecto-sp9_F_contig992:14169..21773+ (Ectocarpus species9 EcSCA_722f female)
CAACCCGCAACCAAATCGCACGTGCTCTCCAGCACACCCGCTTGTTCACG ATGAAAGATGCCCTGCCCCAGCAACAAGTTTTGCGGAATGAGTCTCATGA GCACGTCCCGTCCGTGGAAGAGGAGCTGGACGAATACATGATGCTCAGAG AGGTAATAGCGCACCGGATGGAATGTTTATCTCCCAAACGCAACCTTGAA GGTGACTTCAACTGCTGTTTGCGGGAGAGACTCGCGTGGGAGGGTGGAAG TGCTCCGCGCGGCGAATGCTTGCCCGTTTGTCAGCGGGAAATAGACGCGT GTTGGTTTTTTGCTTCACTACAAAACAACACGATTGCTGTTGTTACAGCA AGAGCAAGCGATTTGTATGTGTGACGACGGTTGATAACACCCCCCCAAAG GTTGATGCAAGGTAACCTGCTAAACACGGCATCAAGACGGATACCATGTG TAGTAGTGGCACGCACCAGACATGATCGCGAGTAAAGCGTGTACGAGATG GGACAATTCTAAAACAATTGCACCCACATGGATGATGCAGCAGTGGACCT GTCACGGTGAACTTCTTCCGCATTCCCCAGCTGCGCAGGGAAAAGTATAA GAGAAGACCATGACGCCATGACGCCCGACGGACATTTCTGTCTCGTGCCC AGGTGTCAGGCCAGTACCCTCGCGAAGACGAGGCTCGCTCGTACATAGTT AAGCGTCGCCAGCGAGGACTTCTTCTGAGCTTCACGGCGATGGTTTTTGT CAGCCTTGCGAACAAGGTTTTCCAAAAGGTGAAGAGTTGGTACGCATATG TTTCGTTCCTCCCGTGCCTTGGTAATGATTACCAGTTCATCAGCAGGACA CATCCACCTGTAGATGCCGGTGCCAGAGTCAGCAGCGGCAGCAGAGCTTT GCCGCTTCGCCGTCTACAAGTTGTGATGTGGTTCTATGTTGGGTACGTTT CTGGTGCTGCATGTGTATTCGCTGCAGGGCGCTTGCTGTTGATCTTCCCC TCGCGGGAAAAATCCTCTCAGTCCAAGCATCCCCGGTCCATCACATTTGT TGTCCCCTCTCTTGTTGCCCGCCCTTGTTGCCGATTGATCCAGCTGGAGA CGATCCCGATGTACAACTACCCCAATTTCCTGAACCTCTTCACGACCTTC GTATGTGAGTGTGGGACTGAATTCTAGGCGGATAGCCCAGATTCTACATA CAGCAAAGGGTAATCCCTTCTCGTCGGCACGTTGATTTGTTTGTCCACTC TGCAGCATGCGAGCAAATGCAACGTATGCGTACTCAATGAACTAGGAGAG TTTTGTTGCAACCAAGTACGGGTCGATCACCATAACCCTCGCAAGATATC GCGAAGCGCGCCTGCGTTCCTCAAGCTCTGGCTGAGAGAGGCTGCTGCAG CGCAAGCTTTCCTAGACATCACTCCCTCTCGCGGATATATACTTGAGGCC TGACGAAAACGGCCTGAGTCTCACGGTCGCGTTTTGAGGGCGCCGGGAGT CACTGAGGAACGTATCTGCTGAGGATGCTATGGTTTTTTTCATGCGCAAG CAATGCATCGGGCAACTCACGTAGGTTTGGAGATTGCGCCTGCCGCAGCT GCGGCCTGCCGTGCAGCCACTACGTTTTCATGCATCATGCGAGGCCCCGA ATCGTGTGCTGTGGGGTATTACCCTTCGACATCTCATCTGACTTGGTACC GCTACCGCACGTCGCCCACACACCGCCTCTTCCATCTTATAACATCGTTG CCGTGATTTGCGACTCCCTCCCATGCTGAACGGACATCGCTGCGACATCA TTCCAAATTTGGTTTTGCGTGTTTTCCGTTCACCTTCCCTCCCTTCGCGC AGACATCCCTTTCAGTTTCGCGTACATCATCCCCATGATGCGATACGGTG ATACCATCACGGCTGAGCAGACCAGCGTGCCGAAGAGGGTGTTCGCCGTC ATGGGCGCTCTGGACGGCGTCAGCGGCATCATGCAGATTTTCGCGTCGAC CTACCTAGGAGGGTCCCTCATCATCCTCCTCACTCAGGTCTGGACAGACA GCCAAATTGATATGCGTAAGTTTTGCTTATCCTGGCAAGGGGTCGATGGC GTGTGCAGCACTGCACTGCTGTACAGGCGTTGCCTAAGCATCTTTTGTGG AGAGGGTTTCGGAACCGACCATGTGTTTATGTACGGGCTGCGCGGCCGGG GGGGCTTGAGCGCCCCGTCCGCCCTGTGTAGTGTCCATACTGAATGCACA AGATGGGGAAGGTTTGAAATCGCAAACGTGGTGTGGTCTGGCAGTAACAT CGACTGTTCCTGTTATCATTGTTTTCTGCACGGCCTGTACGCAGGTGGTT CGTAGCCCGCTCTACATGATGGCCGCGGTGTTTTGCCCCTCTCGAACTTT GACCGTGATATGCATATGCCTCCCCGCATCTTTCCAGGCTGCGATCCCGA TCTCAATGGTGACCTCCAAGCGTTTGACGGGGGCTCGCTATTCTGTTTCG CAATACACCGGCGCAACGGTTGTGGCTGCGGGGATCGTGATCGCCATTGG CCCGAGCCTAGCGGTTGGCTCCAACAGGTGCAAATCCGAAGACAAAATGA CTGAAAATGACTGAAATTGACAGCTGTTGTGGTGTCGTGAGGCCGGCGGG TAGTCTTTTACAGTAGTACATGTACCACCTCTGCACGGGGGTGGCCTTGA CTTGACTTGTGGCGTACTTCATGCGGAAGGTGCGTCCACCTCGGGATCAC ACAGAATATAATTTAGCGACAACAACTGGAACACCCTAGGCGTTACTTTT CAGGTTTCGCCACAGAGAAGACTTTTGGCGATAAGCTAGATTGCGGAGCA ACACGCGAACCGTTAATGATTGGTTTTGCTGCTTCGCAACAACAACAACA ACAACACACATCGCAGCTCCACACGACCCATCACACAGGACTCAAACACG CCGCGTTCTCGCAGCAGAATTTTGAGACGTGGCTGTGATGGGTGGCATGT TGCCCGGATGTGGCTGTGCGTTAAAGAACAAAATCGAGCTCTATTTTTTT TCCTCTCTTCACAGCGGTGGTGGACAGGAGTTGGTTTGGTCGATGGTGCT GGTGGCCTCCTGCTTACCCATGGCGCTCTCAAGCGTGTACAAGGAGATGG CTCTCGGCGAGTCCGAGCTCGACCCCATCTACCTCAATGGGTGAGTGAGA ATACCTCAACGGGTAGTAGTGGGAACACCTCAATGGGTAGTATTATAGTG AGAATACCTCAACGGGTAGTAGTGAGACCACCTCAATGGGTAGAGAGTAC CTCAACGGGTAGTAGTGGGAACACCTCAATGGGTAGTAGTGAGAATACCT CAACGCGTAGTAGTGAGACCACCTCAATGGGTAGAGAATACCTCAATGGG TAGTAGTTAGAATACCTCAATGAGTGAGTGAGAATACCTCAATGGGTAGT AGTGAGACCACCTCAATGCGTGAGTGAGAATACATCAATGGGTAAGTGAG AGTACCTCAATGCGTGAGTGAGAATACATCAATGGGTAGTAGTGAGAATA CGTCAATGCGTGAGTGAGAATACATCAATGGGTAGTAGTGAGAATACGTC AATAGATCGTAGTGAGAATACGTCAATGCGTGAGTGAGAATACATCAATG CTTCAGTGAGAATACCTCAATGCGTGAGTGAGAATATCTCAACGGGTGGG TGAGAACTCGAGCGGCGGAAGATCTAGCTGTATCTCTACATTGTAAAGCT TGCCGTTAAGTCTCTTGTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGT TGTTGTGCCATGGACTATCTACGAACAGCCGAGGCGATCTCATCCCCAGC ACTAACGTTGTTGCTGCTACGTGTGGTTGTGTGGTCGTGTGTCTTTGACA CGGGGCACCGTAACTGGTGACACGATGGTGTTGCCTGTAGTTCGTTTCGG GGTTGCTCCGCGGTGGTTTCTCCACCTACTGCGGTGCAACAAGCTCGAAA TACTCAATACGGCATGTCCTTTGACGTTCAGAGTGCGACCCAAGTCGCCA GCCAAAAGCACTGTAGATATGCTGATTTTTCCGACAAAATAACGCCGGAG AAGACGACAACTCCAATTTGGTCTTTTGAGTCTGAGCGATGGGCTCTCTT TCTTTTCTCTCTCTCGCGCGCGCTCTCCCCGCTCGCGTCTGCTCCTCGTC CAGCTTGGTTTTTTGGGGGGGACATGTTATCCGCTTGCGCGATTGAAAAC ACGTTGCCGTTTGGGTGCAACCACGTCTGTCCTGCGAGCTTCGTTTTTGT GTTGGCCTGTGACGGCAGAACAAGGGGTATCTGATCGAGAATACCAGATT CACTAGTCTATTGGCGTGAAGACATCAACAACAGGCGGCGAGACGATAAG ACCGGACCTCCTTTATTTCACCACACTCCGTTTCCGTTCCTTCGCGGTCC TTCCCTACCGTTGCAAAACCCTCGCCCACTCTGGTTATCCTGTGTGCATG TGCAGCTGGGTGGCCGTTTTCCAGTTCCTGATCTGCATACCGTTGGCGGT GCCAGCGGCACTAGCGGGTGACCCGGCGATCTCCCCCCTGGAGCTGCCGA AGAACCTCTGGGATGGGTGGATGTGCTACTTGGGCTACAACTCGGTGATG ATTGGGGAGCATCCGGACAACTGCTGGCCCGACAGTCCGCTCTATGTCAC CCTCTACCTGATGGTGAACATCACCTACAACATCCTCATCACCTTGGTGA GAGCGAAGAGACAGACGACGGCTTGGTCGTGCTTGGCGAAGTTGTTGCGT TCGTTGCTCCGCAAGTCACTACACCGCCGTTAGTTTTGCCGGCACCGCTG GAGACCATGCGCATGCGACCATCGCCGTTCTGTCACAAGCTAGCCTCAGG GATGTGGATAAGAGTGTGCACCGCAGCAGATGGCACGGCAATTTGAGGGC AACATTGCTTGGCTTTTGTAACGCCGCGATATGATCGTTTTCTCCCTGTC TTTCCTCCGTATATCTCCCTATCTTGGCTCCAATCACGGTGCATGAGTAC GTAAGAGTGTAACCCCAGAACATCATGCTCCTGCGTTCTTGAACATCAAC CGATTGTGCGCCACTGCCACCGTCTCTTGTACACACACGGATCTTGCGGC CCGCCTGCTGATGCCGTGTCCGCGGTACTCTTCTTGTTTTTTGTCCTTGC CGGCGCGATGGCAGATATTGAAGTACGGCGGCGCTAATGTGCTGTTTCTA GCGATGACGATCTGCGTGCCCATGGTGAGAAAAGTTAGCGTTTCCCCAAT GTTTTTGTCCCCGGGCAAGGGGTTGTGTCGTGGGGGCTGCCTAACCTATC CAGATTTGTGTCTCGTCAGTCACGTAGAAGGGTTTTGGGGGGTGGGTGGT GAAGACGAGACAAGGGACTGATTCGAGAGTTGCTAGTTTCCTTCAGGGTT CCCGTGCGGTAGAGAGAAGGAGAGAGAGAGAGAACTAATAGGCAGAGACG AGTGTGCTGTCTCTCATCAAAGTGATTTTCAACTTCACCTAAACATACGA GTAGGAGGAGAGCCACACTCCACGTCCGGTCGGTGCGTCTTTTTTGCAAG GGAGGCGAAGCCACACTTTCTCCAGGCTCACTTCTAATATAGCGGCGATG GGTGTAAGCACGCACAACATGCAGTCCATCGCCATGTCTCTAGTTGCAAA CGTTTTATATTCTTGTACCTCACAAGCTGGTTCACGGTGAACGCCCTAAC GCTTTTTGTCGCCAAAGTTCAGGTTTGATTCTGTCAGTCCATTTTTTTGT CTGATTTTCGTTGCGGAGGGTGTTTCGACTCCTGAGCCTGAACTTGGACG TGCCGCTTGCTTCCTGGTTCCTTTACAGGGAAACGTCATCTTCGCGCTCC CTTTCGTGCCCGGGCACCAACCCCTTCACGCTACGGACATCCTCGGGCTG ATTTTCGTCATGACGGGACTGGTTTTGTACCGCTTCGGCCCGGCGCTCCA CCACTTCTTCGGCCGAATCGAGGCCGGCAGTGACCGCGTCGCTAAGGTCG CCTCTTCCATAAGAGGCCGCGGTTCGGGTCCGCCGTACGCGGCGGGAGAT CACCGCGAGCCTCTTCTCGATCTGGCGGAAGAAGGCGACCAAGAGGACAG GGGTTTCTATGACAGGAGAAGGATGGAGGCGGGGAGAGGGGCGCAAGGGA GGAGGGATCATATGAAGAAGGTCCCGAAGCCGGTTGACGACGAGTGGGAG ATGTGACCTGCTGTTGTCCACGGACACTAGAGCTTTTGGATAGGGAGGAA GGTTGGCCAAGACCGGCTGTGCTTGCCGGATGGTAGATAGTCCCCGATTT GGACGGGGGGTGGGGGGCGGCAGGGAGAAACGCGAGCGCGCGGAGGTTGG GCAGACACGTGTGCTCTTACGCCTCATCATCCATTGAGCATCGTTCACCA TAAATAGGCACATGCCGTATGTACATACAGATTCGTGTTTGTTTTGTCAG GTCGTTGGTAGTGGGAGAGTAGCCGTTCTTTCCAGAAGCTTTTGCCCGCT TCGAAACAACAGCTGCAAAACGCCACGTCAGCAGGTAGTCGTGCATGCAT GTGTTTTCAGGTCCTCCGTGTGCTTGCCACACGCTTCAGCAACAGCACGT ATCCACGTCCTGCCCGAATTACATAGTGATATCGACGTGTCAAGGTCAGC GGTGTGGTTGTTCAAAGTAGGGGTTGAATGGATAATATGCATTCAAAACG CGCAGAACGGTTTGGTTTGATGATGTTGGGAATCGGTACAACTGGGCGTT AACATTGATTGATTGTTGGTTTGTCAAGGGGAAGGGGGGCGTACGTCGTG TGTCCGTCATGTCTGCTTCAACGAATTCATTTGTACGTGGTAGAAAATAC CAATGGGCAACTAAGAGTTTTTTACGTACGTTCATTCGCGTGCGTGCGTC CTTTCGGTGCATGATTCGCTGAAGAAGTAAATATGTTTGCAGGTTCTTGA GTTCTGAGCGTAGCGATTCATGTAGAAAGGCTCCGAGAGAAGAGGCCCTA GCCGTCGTTGTTGTTGTTATTTGCTGTAGCATGTTGCGACGCATCGATTA GGCCGCAAGTAGATCACGAACGTTGCGTGTTATTTTGTCTTTTTGTTTTT GTTTTCGTTTCTTCGTTTCTTCGTTTCTTTCTTCTCCCGGCAGGTTTCTG CCCTGTTCGAGATTTGAGTACAAACAAGGATGGATATCAACGGTGCATGC AGTTGGTCTTGGGAAATAATAGTATTCTGTAAAGACTTCAATACCTCCCC TCGACTGCTCTGGTTATATCTCGCACGGGTACAACTGTTGAACAGCAGTC TTTGTGTTTTTTTGTATTCTGGTATTTTCCTAAAAATATTGATCTTTGGT GGGAGGTGCAACTCCCTGGGTGGGATATAGACCTTAGATTAGTCCGAGGG GATGAGAGTCTTCACGACCCCTCCCCACTGGAGAGGCGTCTCTCTCGCGC TCTCTCCCGTCTGTTGTTTCGTTCATCACAGCATTCTACTTTCTTCCAAA GAGAGCGAAGCAACAACAAGCACTGCTGGTTCTTCAAGAGATTTGTCAAC AAGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig992:14169..21773+

>mRNA_Ecto-sp9_F_contig992.17989.1 ID=mRNA_Ecto-sp9_F_contig992.17989.1|Name=mRNA_Ecto-sp9_F_contig992.17989.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2838bp|location=Sequence derived from alignment at Ecto-sp9_F_contig992:14169..21773+ (Ectocarpus species9 EcSCA_722f female)
ATGAAAGATGCCCTGCCCCAGCAACAAGTTTTGCGGAATGAGTCTCATGA
GCACGTCCCGTCCGTGGAAGAGGAGCTGGACGAATACATGATGCTCAGAG
AGATGAAAGATGCCCTGCCCCAGCAACAAGTTTTGCGGAATGAGTCTCAT
GAGCACGTCCCGTCCGTGGAAGAGGAGCTGGACGAATACATGATGCTCAG
AGAGGTGTCAGGCCAGTACCCTCGCGAAGACGAGGCTCGCTCGTACATAG
TTAAGCGTCGCCAGCGAGGACTTCTTCTGAGCTTCACGGCGATGGTTTTT
GTCAGCCTTGCGAACAAGGTTTTCCAAAAGGTGTCAGGCCAGTACCCTCG
CGAAGACGAGGCTCGCTCGTACATAGTTAAGCGTCGCCAGCGAGGACTTC
TTCTGAGCTTCACGGCGATGGTTTTTGTCAGCCTTGCGAACAAGGTTTTC
CAAAAGCTGGAGACGATCCCGATGTACAACTACCCCAATTTCCTGAACCT
CTTCACGACCTTCGTATCTGGAGACGATCCCGATGTACAACTACCCCAAT
TTCCTGAACCTCTTCACGACCTTCGTATACATCCCTTTCAGTTTCGCGTA
CATCATCCCCATGATGCGATACGGTGATACCATCACGGCTGAGCAGACCA
GCGTGCCGAAGAGGGTGTTCGCCGTCATGGGCGCTCTGGACGGCGTCAGC
GGCATCATGCAGATTTTCGCGTCGACCTACCTAGGAGGGTCCCTCATCAT
CCTCCTCACTCAGACATCCCTTTCAGTTTCGCGTACATCATCCCCATGAT
GCGATACGGTGATACCATCACGGCTGAGCAGACCAGCGTGCCGAAGAGGG
TGTTCGCCGTCATGGGCGCTCTGGACGGCGTCAGCGGCATCATGCAGATT
TTCGCGTCGACCTACCTAGGAGGGTCCCTCATCATCCTCCTCACTCAGGC
TGCGATCCCGATCTCAATGGTGACCTCCAAGCGTTTGACGGGGGCTCGCT
ATTCTGTTTCGCAATACACCGGCGCAACGGTTGTGGCTGCGGGGATCGTG
ATCGCCATTGGCCCGAGCCTAGCGGTTGGCTCCAACAGGCTGCGATCCCG
ATCTCAATGGTGACCTCCAAGCGTTTGACGGGGGCTCGCTATTCTGTTTC
GCAATACACCGGCGCAACGGTTGTGGCTGCGGGGATCGTGATCGCCATTG
GCCCGAGCCTAGCGGTTGGCTCCAACAGCGGTGGTGGACAGGAGTTGGTT
TGGTCGATGGTGCTGGTGGCCTCCTGCTTACCCATGGCGCTCTCAAGCGT
GTACAAGGAGATGGCTCTCGGCGAGTCCGAGCTCGACCCCATCTACCTCA
ATGGCGGTGGTGGACAGGAGTTGGTTTGGTCGATGGTGCTGGTGGCCTCC
TGCTTACCCATGGCGCTCTCAAGCGTGTACAAGGAGATGGCTCTCGGCGA
GTCCGAGCTCGACCCCATCTACCTCAATGGCTGGGTGGCCGTTTTCCAGT
TCCTGATCTGCATACCGTTGGCGGTGCCAGCGGCACTAGCGGGTGACCCG
GCGATCTCCCCCCTGGAGCTGCCGAAGAACCTCTGGGATGGGTGGATGTG
CTACTTGGGCTACAACTCGGTGATGATTGGGGAGCATCCGGACAACTGCT
GGCCCGACAGTCCGCTCTATGTCACCCTCTACCTGATGGTGAACATCACC
TACAACATCCTCATCACCTTGCTGGGTGGCCGTTTTCCAGTTCCTGATCT
GCATACCGTTGGCGGTGCCAGCGGCACTAGCGGGTGACCCGGCGATCTCC
CCCCTGGAGCTGCCGAAGAACCTCTGGGATGGGTGGATGTGCTACTTGGG
CTACAACTCGGTGATGATTGGGGAGCATCCGGACAACTGCTGGCCCGACA
GTCCGCTCTATGTCACCCTCTACCTGATGGTGAACATCACCTACAACATC
CTCATCACCTTGATATTGAAGTACGGCGGCGCTAATGTGCTGTTTCTAGC
GATGACGATCTGCGTGCCCATGATATTGAAGTACGGCGGCGCTAATGTGC
TGTTTCTAGCGATGACGATCTGCGTGCCCATGGGAAACGTCATCTTCGCG
CTCCCTTTCGTGCCCGGGCACCAACCCCTTCACGCTACGGACATCCTCGG
GCTGATTTTCGTCATGACGGGACTGGTTTTGTACCGCTTCGGCCCGGCGC
TCCACCACTTCTTCGGCCGAATCGAGGCCGGCAGTGACCGCGTCGCTAAG
GTCGCCTCTTCCATAAGAGGCCGCGGTTCGGGTCCGCCGTACGCGGCGGG
AGATCACCGCGAGCCTCTTCTCGATCTGGCGGAAGAAGGCGACCAAGAGG
ACAGGGGTTTCTATGACAGGAGAAGGATGGAGGCGGGGAGAGGGGCGCAA
GGGAGGAGGGATCATATGAAGAAGGTCCCGAAGCCGGTTGACGACGAGTG
GGAGATGTGAGGAAACGTCATCTTCGCGCTCCCTTTCGTGCCCGGGCACC
AACCCCTTCACGCTACGGACATCCTCGGGCTGATTTTCGTCATGACGGGA
CTGGTTTTGTACCGCTTCGGCCCGGCGCTCCACCACTTCTTCGGCCGAAT
CGAGGCCGGCAGTGACCGCGTCGCTAAGGTCGCCTCTTCCATAAGAGGCC
GCGGTTCGGGTCCGCCGTACGCGGCGGGAGATCACCGCGAGCCTCTTCTC
GATCTGGCGGAAGAAGGCGACCAAGAGGACAGGGGTTTCTATGACAGGAG
AAGGATGGAGGCGGGGAGAGGGGCGCAAGGGAGGAGGGATCATATGAAGA
AGGTCCCGAAGCCGGTTGACGACGAGTGGGAGATGTGA
back to top