mRNA_Ecto-sp9_F_contig988.17949.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 5.490e-132 Identity = 242/498 (48.59%), Postives = 295/498 (59.24%), Query Frame = 1
Query: 37 VKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLS---DEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQN--------------------------------------DPEHGAAYIREVVDESSRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDE-KALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDG-GLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDVPLR-------------------------PYDAALDAI-DPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALA 1323
V IPSGAP IR WYV+R V ++ C LGIG S + S ++PRM+GLAGP G GKST A+MVV + DV+A F VLWL + E GAAYIRE + RFLVVADDVW+ EVL EL+RAG WV+YTTR+ L P RL+E+L EAE++LRRAADL + ARLP AAY+LM RC+F VLDLA+VGRWG +RRR E AWR A + I+E Q+ GGD + L WRAAVLRAGL LASDNPQ ELY +LA++P GL+FP EV A++LLYGDD S L+AAE V+ TLER SILT+E+ G + VH+ H +F+ R A R TAL RWR Y SS L PY+AAL+AI D S E L + A+FH R+DW E KYS LL +KE G H DVA L+N G CA + R +E E +RALA
Sbjct: 7 VNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGA-WVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEV-ALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 1.350e-129 Identity = 243/505 (48.12%), Postives = 296/505 (58.61%), Query Frame = 1
Query: 16 VADAASSVKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLS---DEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQN--------------------------------------DPEHGAAYIREVVDESSRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDE-KALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDG-GLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDVPLR-------------------------PYDAALDAI-DPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALA 1323
V + V IPSGAP IR WYV+R V ++ C LGIG S + S ++PRM+GLAGP G GKST A+MVV + DV+A F VLWL + E GAAYIRE + RFLVVADDVW+ EVL EL+RAG WV+YTTR+ L PE RL+E+L EAE++LRRAADL + RLP AAY+LM RC+F VLDLA+VGRWG +R R E+AWR A + I+E Q+ GGD + L WRAAVLRAGL LASDNPQ ELY +LA++P GL+FP EV A++LLYGDD S L+AAE V+ TLER SILT+E+ G + VH+ H +F+ R A R TAL RWR Y SS L PY+AAL AI D S E L + A+FH R DW E KYS LL +KE G DH DVA L+N G CA + R +E E +RALA
Sbjct: 166 VMEKPGRVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGA-WVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEV-ALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 397 bits (1021), Expect = 6.440e-127 Identity = 234/500 (46.80%), Postives = 301/500 (60.20%), Query Frame = 1
Query: 19 ADAASSVKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLSDEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQN--------------------------------------DPEHGAAYIREVVDESSRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASS----------------DVPLR---------PYDAALDAIDPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENAL-GMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALAV 1326
+ +A V +PSGAP+I W+V+R+ V+EACD LGIG S + PR++G++GP G GKST A+MV+ R DVR +F+KGVLWL DPE GA YI EVV+ES+ RFLVVADD+ E EVLEELK AGV WVLYT+R+D LL RLD + E +VLRRAA L D+A LP AA++LM RCE+ + LA GRWG+VR + DE+AWR A I E QK GG+ + L+WR A+LR G +EL +D+ KELYLSLA++PKGL+F R VA +LLYGD+ SA +LEAA + + TLER SILT+E G +RVH+ HA+F++ AN + R AL+RWRGYAS DV + PYDAALD +DPSS + A L++ A FH +R+D LE + K L ++E A G L VA L+ G C R EEAE QRAL +
Sbjct: 116 SQSAGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGV-WVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAF-RSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTI 613
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 382 bits (982), Expect = 5.000e-120 Identity = 233/509 (45.78%), Postives = 289/509 (56.78%), Query Frame = 1
Query: 1 QEQHKVADAASSVKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLSDEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQ---------------------------------------NDPEHGAAYIREVVDESSRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQ---DLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASS-------------------------DVPLRPYDAALDAIDPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALAV 1326
QEQ +VAD AS+V+IP+ AP+IR +V+R V+S+ C LGI T+ E +++GLAG G GKST A+MV+RR DVRA F GVLWL D E AAYI+ + E RRFLVVADDVW+ EVL+EL+RA V VLYT+R LLP LD++ EAE+VLR AA+L +A LPEAAYDLM RCE+ LDL VGRW RRR E AWR A + IV+ Q G LSWRAAVL GLEELA +N N+ELYL+LAVIP+G FP +V AVLL YGD S + D E A+ + TLERWSI+T GG +RVHDEH +FI+ AANQ AR T L RWR Y SS VP +PY AL + PSSA+ L A F+ R+ W+ +S LL ++E+ G+D + VA L+ G C M R EEAE +RAL +
Sbjct: 12 QEQRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGEGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLL-YGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI) HSP 1 Score: 282 bits (721), Expect = 5.420e-86 Identity = 176/367 (47.96%), Postives = 214/367 (58.31%), Query Frame = 1
Query: 310 VVDESSRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLE---AAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDVPL-------------------------RPYDAALDAIDPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALAV 1326
V DE R LVVADDV E EVL+ELK G A++VLRRAADLD++A LP+A Y+LM RCEFVVLD+A VGRWG+VR RR EKAW++A +RI+E Q GG LSWRA+VLRAGLEELA DNP NKELYL+LAV+P GL+FP EV A LL Y D LS +DLE AE V ATLERWSIL GG +RVHDEH++FI+G L+ N+D + L RWR Y SS L RPYD AL+A+D SAE L F++ R+D + +S LL ++E + D L V L + A M R EEAE +RA A+
Sbjct: 2 VEDEGRERVLVVADDVREAEVLQELKTEG-----------------------------ADMVLRRAADLDESAVLPDAGYELMRRCEFVVLDIAFVGRWGVVRGRRKEKAWQMALDRILEAQAGGEGVGPLSWRASVLRAGLEELAVDNPLNKELYLALAVLPMGLTFPSEVAAALL-YDDALSGEDLEDLEVAEEVAATLERWSILIRMGGGNYRVHDEHSDFIRGCLSTNKDTQDRVLRRWRRYISSVRALLACEPEDLVKIWDSLASDQDDVIDPRPYDRALEAMDMPSAELPRALHLAGFFYMVREDGEGACSTFSKLLKLQETTVTSDGLIVWETLRSLHLSAYMSGRWEEAEVTQRRADAI 338
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 271 bits (693), Expect = 6.340e-77 Identity = 203/578 (35.12%), Postives = 278/578 (48.10%), Query Frame = 1
Query: 4 EQHKVADAASSVKIPSGAPQIRVWYVKREAVVSEACDRLGI--GKSTSVLSD--EPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQN------------------------------------------------DPEHGAAYIREVVD----------------ESSR---RFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQR---------------LDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRI-VEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSF-PREVVAVLLLYGDDLSAQ--------DLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASS--------------------------DVPLRPYDAALDAIDPSSAE-YAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMD-------------HLDVAIALNNFGFCANMMWRIEEAEALNQRALAVR 1329
E+++VA AS VK+PS AP+I+ WY+ R V + C RLG+ G + L D EPRM+GLAGP+G GKST ++VV R DVRA+F G++WL D E+GAAYIR + E R R+L+VADDV+E EVLEEL+ G WVLYTT + + +R LD + E E VLRRA+ LD A LP+ A DL+ VV+DLA +GRWG+VR D KAW A N + +E GG + W AVL AG+ +LA N + K+LYLSLAV+PKGLSF P + A+L G D A DL A V+ LER S+L +E+GG + +H HA+F++ ++ +R AL RWR + S+ + P PYDA LD +D S A+ ++ +LE+ A + HAKY+ L+ V E+ L + L +A L+N G A + EEA A + RA ++R
Sbjct: 228 ERNRVAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGA-WVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIR 804
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 259 bits (661), Expect = 8.120e-73 Identity = 183/516 (35.47%), Postives = 263/516 (50.97%), Query Frame = 1
Query: 40 KIPSGAPQIRVWYVKREAVVSEACDRLGIG-KSTSVLSDEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHF-HKGVLWLQN--------------------------------------------DPEHGAAYIREVV--DESSR------RFLVVADDVWEREVLEELKRAGVLWVLYTTR-QDTLLPEQ---TPQRLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDVPL----------------------------RPYDAALDAIDPSSAEYAGILEKTADFH-LKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALAV 1326
K P+ AP ++ W+++RE VV+ CDRLG+ + S S EP ++G+AGPSG GKST A+M+V R DVR HF KGV+WL +PE GAAY+RE++ DE R LVVADDVWE EVL EL+ G +LYTTR ++ LL + R+DE+ EAE +LRRAA L D ++LP+AA+D++ R V +D+A VGRW +VR + D+ AW +++ Q L WR+AVLR G+ L + KELYLSL V+P+ LSF + V L+ D SA++L+AA MATLE+WS+L +GG +RVH HA+ ++ + AL+RWR S+ + +PY +DA+D S A +L + A F L + C + +L + +++A +H DV + + G A + R EAE +R LA+
Sbjct: 259 KSPAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGAS-ILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALV---SDGSAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAA--NHPDVHVTMYTLGAHALISGRTPEAEGWFRRTLAI 768
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 252 bits (643), Expect = 2.350e-70 Identity = 180/519 (34.68%), Postives = 257/519 (49.52%), Query Frame = 1
Query: 31 SSVKIPSGAPQIRVWYVKREAVVSEACDRLGIG-KSTSVLSDEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHF-HKGVLWLQN---------------------------------------------DPEHGAAYIREVV--DESSR------RFLVVADDVWEREVLEELKRAGVLWVLYTTR-QDTLLPEQTPQ---RLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRIVEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDVPL----------------------------RPYDAALDAIDPSSAEYAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQRALAV 1326
S K P+ AP ++ W+++RE VV+ CDRLG+ + S S EP ++G+AGPSG GKST A+M++ R DVR HF K ++WL +PE GAAY+RE++ DE R LVVADD+WE EVL EL+ G +LYTTR ++ LL R+DE+ EAE +LRRAADL D+ +LP+AA+D++ R V +D+A VGRW +VR D+ AW V +++ Q L WR+AVLR GL L + KELYLSL V+P+ LSF V L+ D SA++L+AA + TLE+WS+L +GG +RVH HA+ ++ + +AL+RWR S+ + +PY +DA++ S A +L + A F + +S LL E++ D DV + G A + R EAE +R LA+
Sbjct: 300 SKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGAS-ILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALV---SDGSAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAANDP-DVHAIMYTLGAHALVSGRTHEAEGWFRRTLAI 813
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: TPR (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.410e-63 Identity = 180/519 (34.68%), Postives = 243/519 (46.82%), Query Frame = 1
Query: 163 MLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQN------------------------------------------------DPEHGAAYIREVVD----------------ESSR---RFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQR-------------------LDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRI-VEIQKGGGDEKALSWRAAVLRAGLEELASDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQ----DLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSRWRGYASSDV-------------------------PLRPYDAALDAIDPSSAE-YAGILEKTADFHLKRQDWLECHAKYSILLTVKENAL------GMDHLDVAIA-------LNNFGFCANMMWRIEEAEALNQRALAVR 1329
M+GLAGP+G GKST ++VV R DVRAHF G++WL D E+GAAYIR + E R R+L+VADDV+E EVLEEL+ G WVLYTT + + +R LD + E E VLRRA+ LD A LP+ A DL VV+DLA +GRWG+V D KAW VA N + +E +GG + W AVL AG+ +LA N + K+LYLSLAV+PKGLSF A LL GD +A+ DL A V+ LE+ S+L +E+GG + +H HA+F++ ++ +R AL RWR +AS+ P PYDA LD +D S A+ ++ +LE+ A + HAKY+ L+ V E+ L G D + A A L+N G A + EEA A + RA ++R
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGA-WVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIR 518
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.330e-55 Identity = 159/504 (31.55%), Postives = 239/504 (47.42%), Query Frame = 1
Query: 28 ASSVKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLSDEPRMLGLAGPSGVGKSTAAAMVVRRTDVRAHFHKGVLWLQ-NDPEH-------------------------------GAAYIREVVDES----SRRFLVVADDVWEREVLEELKRAGVLWVLYTTRQDTLLPEQTPQ--RLDEMLPNEAELVLRRAADLDDNARLPEAAYDLMNRCEFVVLDLAMVGRWGLVRRRRDEKAWRVAFNRI-VEIQKGG-------GDEKALSWRAAVLRAGLEELA--SDNPQNKELYLSLAVIPKGLSFPREVVAVLLLYGDDLSAQDLEAAERVMATLERWSILTVEDGGLHRVHDEHAEFIQGRLAANQDARVTALSR----------------------WRGY----ASSDVPLRPYDAALDAIDPSSAE-YAGILEKTADFHLKRQDWLECHAKYSILLTVKENALGMDHLDVAIALNNFGFCANMMWRIEEAEALNQR 1314
A +P G P + W+V+R V L P ++GL G SG GK+TAA+ +V VR F G++WL N+ H G AY+++ V+ + LVVAD+VWE +V+ +L G +W+L +TR + L+ + +DE+ EAE VLRRAA+L ARLP+ A DL+ C V +DLA VGRW VR R+D AW A ++ E+ KGG ++ ++ R A+L+AG E+LA SD+ + + LYLSLAV+P G +F + AVLL Y + +D + V+ LERW+I+ + +R+HD H+ F + L D R A+ R W G RPY+ AL+A+D S++ + +E A F ++DW + + LL V+E LG DH V + CA +EEA+ +++
Sbjct: 198 AKVANVPKGTPTHKSWHVERRNVTETVFQALDADGG-------PHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETG-MWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLL-YDREPGTEDEASVGGVVEALERWTIIRSVEA-TYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRK 691 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig988.17949.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig988.17949.1 >prot_Ecto-sp9_F_contig988.17949.1 ID=prot_Ecto-sp9_F_contig988.17949.1|Name=mRNA_Ecto-sp9_F_contig988.17949.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=443bp QEQHKVADAASSVKIPSGAPQIRVWYVKREAVVSEACDRLGIGKSTSVLSback to top mRNA from alignment at Ecto-sp9_F_contig988:111..1628- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig988.17949.1 ID=mRNA_Ecto-sp9_F_contig988.17949.1|Name=mRNA_Ecto-sp9_F_contig988.17949.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1518bp|location=Sequence derived from alignment at Ecto-sp9_F_contig988:111..1628- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig988:111..1628- >mRNA_Ecto-sp9_F_contig988.17949.1 ID=mRNA_Ecto-sp9_F_contig988.17949.1|Name=mRNA_Ecto-sp9_F_contig988.17949.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2658bp|location=Sequence derived from alignment at Ecto-sp9_F_contig988:111..1628- (Ectocarpus species9 EcSCA_722f female)back to top |