mRNA_Ecto-sp9_F_contig9838.17922.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR8_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 8.370e-187 Identity = 272/284 (95.77%), Postives = 274/284 (96.48%), Query Frame = 1
Query: 1 QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGENVAGGGG--SGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 846
+PPDVFLEHQLEAAEHTLLSPGD SLPPALQELPEGWRGVLAAYGK G NVAGGGG SGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEH+RLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTT TTPD E AAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG
Sbjct: 124 EPPDVFLEHQLEAAEHTLLSPGDPSLPPALQELPEGWRGVLAAYGKYGGNVAGGGGGSSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHSRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTXX-TTPDGEIAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 406
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STM5_9STRA) HSP 1 Score: 211 bits (538), Expect = 8.040e-59 Identity = 129/283 (45.58%), Postives = 164/283 (57.95%), Query Frame = 1
Query: 1 QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGENVAGGGGSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKD--DAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
+PPDV LE QL + P LQE E G+ Y GR+V + + PF L+ E VS N R L HFE R KD DAA++ E G+ D H+GK++ Y EDGLAIYEDGTRE + N A + K +G G W+E+F GH DSKP GP SVGMD+ FPG+ H++GIPEHA +SL+ P T P+A H+S+PYR+YTLDVFEY+LD ALYG IP+++GH + G FWFNPTETF+DVE+
Sbjct: 134 EPPDVVLEDQL------------GPVAPQLQERSEA-SGLRLEYMP-----------GRHV-ELGFSPFSLALFIDGEKVVSVNERNLFHFEFHRSKDTPDAASSAEAATAGE--DRHKGKRIVGYWEDGLAIYEDGTREEKVRDN--------AEEEKLRNGDGFWQETFAGHTDSKPLGPASVGMDIDFPGAQHLFGIPEHATRLSLQ----PTTGPNA------HYSDPYRMYTLDVFEYDLDVPMALYGGIPMVMGHTASASVGAFWFNPTETFIDVEK 371
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2P9_9STRA) HSP 1 Score: 206 bits (524), Expect = 8.010e-57 Identity = 122/234 (52.14%), Postives = 151/234 (64.53%), Query Frame = 1
Query: 181 VLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGG--AGGK----TVDLHRGKKVKDYGEDGLAIYEDGTRE----TQEE--HNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 846
VL V+ +PFQ DL G A++ N+ GL+HF+ R K D A AG GG +G K VD H GKK+ Y EDGLAIYEDG+RE +EE R L+EA AA + K WEE F GH DS+P GP SVG+DV FPG++H+YG+PEHA+S LKTT P +A+ ++EP+RLY LDVFEYELD ALYG+IP + H +AGVF FNP+ETFVDVE G
Sbjct: 182 VLRVQLDPFQVDLLVGGVPALTVNKGGLLHFQAYRAKKDKANAGSGGEESGEKIEEEVVDKHGGKKIVGYWEDGLAIYEDGSREEKPSAEEEAAEARRLQEAAAADEDK-------WEEYFGGHTDSRPHGPASVGIDVRFPGAEHLYGLPEHASSFRLKTTKGP----NAQ------YAEPFRLYNLDVFEYELDEPMALYGSIPFVASHTAALSAGVFLFNPSETFVDVEAG 398
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWR3_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.530e-54 Identity = 115/228 (50.44%), Postives = 140/228 (61.40%), Query Frame = 1
Query: 166 GSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKT--VDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
G GR L + YEPF L E + N RGL HFE R ++ GE T D H+GKK+ Y EDGLAIYEDG+RE + + E A+ G+++ G WEESF GH DSKP GP SVG+DV FPGS H+YGIPEHA+SM+LK TT P +S+PYRLYTLDVFEY+LD ALYG IP++ H T G FWFNPTETF+D+E+
Sbjct: 148 GEGR-ALVLEYEPFSVTLLIDGEASAVVNGRGLFHFEYHRSRE-----GEPSLAAPTDDEDRHKGKKIVGYWEDGLAIYEDGSREVKVKDETSEEPAKG--DGEED---GFWEESFGGHTDSKPLGPASVGIDVDFPGSKHLYGIPEHASSMALKATTGPGA----------DYSDPYRLYTLDVFEYDLDVPMALYGGIPLVWSHTTRGTVGAFWFNPTETFIDIEK 354
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Alpha-glucosidase (II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X1_9STRA) HSP 1 Score: 189 bits (480), Expect = 5.090e-51 Identity = 110/226 (48.67%), Postives = 137/226 (60.62%), Query Frame = 1
Query: 193 RYEPFQADLYAGDELAVSANRRGLMHFEQTR---GKDDAAAAGEGG----AGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQGV 849
R+ P + D Y +AN GL+HFEQ + + + A G+ G A H GK+V DYGEDG A+Y DGT E+ +H + + GLG EE FDGH D+KP G TSVGMDV+FPGS +YGIPEHAASM+LK TT + A+ +S+PYRLYTLDVFEYELD ALYGAIP+ + H G TA FW+NP+ETFVD +GV
Sbjct: 85 RFNPLRFDAYVNGAPVAAANAAGLLHFEQRKRDGAQGERALPGDAGDAPPADADVPQAHSGKEVIDYGEDGKAVYADGTHESDSQHRQ-------------DPGLG--EERFDGHVDTKPFGATSVGMDVWFPGSQELYGIPEHAASMALKATT-------GDGAS---YSDPYRLYTLDVFEYELDVPMALYGAIPLAVSHGAGGTAAAFWWNPSETFVDGGKGV 285
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRM7_9EUKA) HSP 1 Score: 186 bits (473), Expect = 6.540e-50 Identity = 103/242 (42.56%), Postives = 139/242 (57.44%), Query Frame = 1
Query: 118 VLAAYGKLGENVAGGGGSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
+ AA + G +G V+ + PF+ LY G + N G +FE R ++DAA A G K D+H GK + DYGEDGLA+Y DGT++ + + E A D G WEESF H DSKP GP+SVGMDV FP + +VYG+ EH ++L +TT E A +SEPYRL+TLDV++YELDS ALYG +P++LGH T G+ WFNP+E F+D+ +
Sbjct: 147 IAAAAASADASAYAVGEAGGAVVVLHLHPFRVSLYQGGVKTLDLNNGGKFYFEHHRKREDAAIALPAG---KAEDVHAGKTIVDYGEDGLAVYSDGTKQEKGADAEAVAETTADSAASD----GEWEESFGSHHDSKPFGPSSVGMDVTFPSTHYVYGLAEHTGPLNLASTT-------GEQAK---YSEPYRLWTLDVYDYELDSPMALYGGVPLLLGHNANSTTGLLWFNPSEAFIDISR 371
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Alpha (1,3-glucosidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS4_FISSO) HSP 1 Score: 184 bits (467), Expect = 1.220e-49 Identity = 111/224 (49.55%), Postives = 133/224 (59.38%), Query Frame = 1
Query: 181 VLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEG-GAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGL---GLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRR-GQTAGVFWFNPTETFVDV 837
VL ++ EPFQ LY D V N + LMHFE R + + E + + + K++ Y EDGLAIY DGTRE +EE E E RQ +E L GLWEE+F H DSKP GP SVGMD+ FPGS H+YGIPEHA+S LK T H+ EPYRLY LDVFEYELD + ALYGAIP ML + + GVFWFNP+ETFVD+
Sbjct: 199 VLLLQLEPFQLTLYRDDVPIVQLNGKDLMHFEVRRMRGENQPQEEVLPKDEEPKEKSQEKEIVGYWEDGLAIYADGTREEREEIKEEAVEEEDHRQLTEEQTLDPEGLWEETFSSHKDSKPFGPMSVGMDISFPGSKHLYGIPEHASSAVLKATR----------GEGSHYKEPYRLYNLDVFEYELDETMALYGAIPFMLSQSKTAGSVGVFWFNPSETFVDI 412
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPS0_CAFRO) HSP 1 Score: 183 bits (464), Expect = 1.070e-48 Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 1
Query: 175 RYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQG---------KDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
R + +VR+ PF D+Y+ + V+ N +G +FE R +++AAA A G G+++ D+GEDG IY DG ++ E A A QG ES G+ ESF GH D++P GPTSVG+D FPGS HVYGIPEHA +++L+ T + A H SEPYRLY LDVFEYEL + ALYG+IPVM+ H +G+TAGVFW NP+ETFVDV
Sbjct: 155 RQLAAVRFAPFSVDVYSEGKHVVAVNSQGNFYFEHRRVQNEAAAEAASAALGSGGSAGSGRRILDWGEDGKPIYADG-----DDDAASAEAAPAEGQGDASGTQLLSNSESEEGMGAESFGGHTDNRPHGPTSVGVDTAFPGSTHVYGIPEHADTLALRATA------PGSSEAGAH-SEPYRLYNLDVFEYELHNPMALYGSIPVMIAHGQGRTAGVFWNNPSETFVDV 372
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Ganab (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QL50_9DINO) HSP 1 Score: 181 bits (460), Expect = 4.760e-48 Identity = 105/230 (45.65%), Postives = 138/230 (60.00%), Query Frame = 1
Query: 175 RYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQG---------KDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
R + +VR+ PF D+Y+ + V+ N +G +FE R +++ AA A G G+++ D+GEDG IY DG ++ E A A QG ES G+ ESF GH D++P GPTSVG+D FPGS HVYGIPEHA +++L+ T + A H SEPYRLY LDVFEYEL + ALYG+IPVM+ H +G+TAGVFW NP+ETFVDV
Sbjct: 87 RQLAAVRFAPFSVDVYSEGKHVVAVNSQGNFYFEHRRVQNEVAAEAASAALGSGGSAGSGRRILDWGEDGKPIYADG-----DDDAASAEAAPAEGQGDASGTQLLSNSESEEGMGAESFGGHTDNRPHGPTSVGVDTAFPGSTHVYGIPEHADTLALRATA------PGSSEAGAH-SEPYRLYNLDVFEYELHNPMALYGSIPVMIAHGQGRTAGVFWNNPSETFVDV 304
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAN2_BRELC) HSP 1 Score: 181 bits (458), Expect = 7.460e-48 Identity = 106/216 (49.07%), Postives = 131/216 (60.65%), Query Frame = 1
Query: 202 PFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDH----VYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
PF DLY E VS+N GL H+E R +A + A VD H+GK + DYGEDGLAIY+DGT +T+EEH E G D++ G WEESFDGH D K GP+S+G+DV F GS +YGIPEHA LK T +A T ++PYRLY LDVFEYELD+ ALYGAIPV++ + T G+FW NP+ETFVD+
Sbjct: 176 PFGVDLYLDGEKVVSSNDNGLFHYE-IRHSSNAVVQSDEVADQLAVDAHQGKTIVDYGEDGLAIYDDGTVQTKEEHAVT----ETTTIGTDQTAEG-WEESFDGHTDKKKFGPSSIGLDVTFHGSAEAPRSLYGIPEHATDFGLKDTIESSEDGEAYTVV----TDPYRLYNLDVFEYELDNPMALYGAIPVLVAPNKKNTVGMFWNNPSETFVDI 381 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9838.17922.1 >prot_Ecto-sp9_F_contig9838.17922.1 ID=prot_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=284bp QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGENback to top mRNA from alignment at Ecto-sp9_F_contig9838:256..4946+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9838.17922.1 ID=mRNA_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4691bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9838:256..4946+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9838:256..4946+ >mRNA_Ecto-sp9_F_contig9838.17922.1 ID=mRNA_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9838:256..4946+ (Ectocarpus species9 EcSCA_722f female)back to top |