mRNA_Ecto-sp9_F_contig9838.17922.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9838.17922.1
Unique NamemRNA_Ecto-sp9_F_contig9838.17922.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR8_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 8.370e-187
Identity = 272/284 (95.77%), Postives = 274/284 (96.48%), Query Frame = 1
Query:    1 QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGENVAGGGG--SGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 846
            +PPDVFLEHQLEAAEHTLLSPGD SLPPALQELPEGWRGVLAAYGK G NVAGGGG  SGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEH+RLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTT   TTPD E AAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG
Sbjct:  124 EPPDVFLEHQLEAAEHTLLSPGDPSLPPALQELPEGWRGVLAAYGKYGGNVAGGGGGSSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHSRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTXX-TTPDGEIAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 406          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STM5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 8.040e-59
Identity = 129/283 (45.58%), Postives = 164/283 (57.95%), Query Frame = 1
Query:    1 QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGENVAGGGGSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKD--DAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
            +PPDV LE QL              + P LQE  E   G+   Y             GR+V  + + PF   L+   E  VS N R L HFE  R KD  DAA++ E    G+  D H+GK++  Y EDGLAIYEDGTRE +   N        A + K  +G G W+E+F GH DSKP GP SVGMD+ FPG+ H++GIPEHA  +SL+    P T P+A      H+S+PYR+YTLDVFEY+LD   ALYG IP+++GH    + G FWFNPTETF+DVE+
Sbjct:  134 EPPDVVLEDQL------------GPVAPQLQERSEA-SGLRLEYMP-----------GRHV-ELGFSPFSLALFIDGEKVVSVNERNLFHFEFHRSKDTPDAASSAEAATAGE--DRHKGKRIVGYWEDGLAIYEDGTREEKVRDN--------AEEEKLRNGDGFWQETFAGHTDSKPLGPASVGMDIDFPGAQHLFGIPEHATRLSLQ----PTTGPNA------HYSDPYRMYTLDVFEYDLDVPMALYGGIPMVMGHTASASVGAFWFNPTETFIDVEK 371          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2P9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 8.010e-57
Identity = 122/234 (52.14%), Postives = 151/234 (64.53%), Query Frame = 1
Query:  181 VLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGG--AGGK----TVDLHRGKKVKDYGEDGLAIYEDGTRE----TQEE--HNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQG 846
            VL V+ +PFQ DL  G   A++ N+ GL+HF+  R K D A AG GG  +G K     VD H GKK+  Y EDGLAIYEDG+RE     +EE    R L+EA AA + K       WEE F GH DS+P GP SVG+DV FPG++H+YG+PEHA+S  LKTT  P    +A+      ++EP+RLY LDVFEYELD   ALYG+IP +  H    +AGVF FNP+ETFVDVE G
Sbjct:  182 VLRVQLDPFQVDLLVGGVPALTVNKGGLLHFQAYRAKKDKANAGSGGEESGEKIEEEVVDKHGGKKIVGYWEDGLAIYEDGSREEKPSAEEEAAEARRLQEAAAADEDK-------WEEYFGGHTDSRPHGPASVGIDVRFPGAEHLYGLPEHASSFRLKTTKGP----NAQ------YAEPFRLYNLDVFEYELDEPMALYGSIPFVASHTAALSAGVFLFNPSETFVDVEAG 398          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWR3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.530e-54
Identity = 115/228 (50.44%), Postives = 140/228 (61.40%), Query Frame = 1
Query:  166 GSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKT--VDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
            G GR  L + YEPF   L    E +   N RGL HFE  R ++     GE      T   D H+GKK+  Y EDGLAIYEDG+RE + +     E A+    G+++   G WEESF GH DSKP GP SVG+DV FPGS H+YGIPEHA+SM+LK TT P             +S+PYRLYTLDVFEY+LD   ALYG IP++  H    T G FWFNPTETF+D+E+
Sbjct:  148 GEGR-ALVLEYEPFSVTLLIDGEASAVVNGRGLFHFEYHRSRE-----GEPSLAAPTDDEDRHKGKKIVGYWEDGLAIYEDGSREVKVKDETSEEPAKG--DGEED---GFWEESFGGHTDSKPLGPASVGIDVDFPGSKHLYGIPEHASSMALKATTGPGA----------DYSDPYRLYTLDVFEYDLDVPMALYGGIPLVWSHTTRGTVGAFWFNPTETFIDIEK 354          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Alpha-glucosidase (II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.090e-51
Identity = 110/226 (48.67%), Postives = 137/226 (60.62%), Query Frame = 1
Query:  193 RYEPFQADLYAGDELAVSANRRGLMHFEQTR---GKDDAAAAGEGG----AGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQGV 849
            R+ P + D Y       +AN  GL+HFEQ +    + + A  G+ G    A       H GK+V DYGEDG A+Y DGT E+  +H +             + GLG  EE FDGH D+KP G TSVGMDV+FPGS  +YGIPEHAASM+LK TT        + A+   +S+PYRLYTLDVFEYELD   ALYGAIP+ + H  G TA  FW+NP+ETFVD  +GV
Sbjct:   85 RFNPLRFDAYVNGAPVAAANAAGLLHFEQRKRDGAQGERALPGDAGDAPPADADVPQAHSGKEVIDYGEDGKAVYADGTHESDSQHRQ-------------DPGLG--EERFDGHVDTKPFGATSVGMDVWFPGSQELYGIPEHAASMALKATT-------GDGAS---YSDPYRLYTLDVFEYELDVPMALYGAIPLAVSHGAGGTAAAFWWNPSETFVDGGKGV 285          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRM7_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 6.540e-50
Identity = 103/242 (42.56%), Postives = 139/242 (57.44%), Query Frame = 1
Query:  118 VLAAYGKLGENVAGGGGSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDVEQ 843
            + AA      +    G +G  V+ +   PF+  LY G    +  N  G  +FE  R ++DAA A   G   K  D+H GK + DYGEDGLA+Y DGT++ +      + E  A     D    G WEESF  H DSKP GP+SVGMDV FP + +VYG+ EH   ++L +TT        E A    +SEPYRL+TLDV++YELDS  ALYG +P++LGH    T G+ WFNP+E F+D+ +
Sbjct:  147 IAAAAASADASAYAVGEAGGAVVVLHLHPFRVSLYQGGVKTLDLNNGGKFYFEHHRKREDAAIALPAG---KAEDVHAGKTIVDYGEDGLAVYSDGTKQEKGADAEAVAETTADSAASD----GEWEESFGSHHDSKPFGPSSVGMDVTFPSTHYVYGLAEHTGPLNLASTT-------GEQAK---YSEPYRLWTLDVYDYELDSPMALYGGVPLLLGHNANSTTGLLWFNPSEAFIDISR 371          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Alpha (1,3-glucosidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS4_FISSO)

HSP 1 Score: 184 bits (467), Expect = 1.220e-49
Identity = 111/224 (49.55%), Postives = 133/224 (59.38%), Query Frame = 1
Query:  181 VLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEG-GAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGL---GLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRR-GQTAGVFWFNPTETFVDV 837
            VL ++ EPFQ  LY  D   V  N + LMHFE  R + +     E      +  +  + K++  Y EDGLAIY DGTRE +EE      E E  RQ  +E  L   GLWEE+F  H DSKP GP SVGMD+ FPGS H+YGIPEHA+S  LK T               H+ EPYRLY LDVFEYELD + ALYGAIP ML   +   + GVFWFNP+ETFVD+
Sbjct:  199 VLLLQLEPFQLTLYRDDVPIVQLNGKDLMHFEVRRMRGENQPQEEVLPKDEEPKEKSQEKEIVGYWEDGLAIYADGTREEREEIKEEAVEEEDHRQLTEEQTLDPEGLWEETFSSHKDSKPFGPMSVGMDISFPGSKHLYGIPEHASSAVLKATR----------GEGSHYKEPYRLYNLDVFEYELDETMALYGAIPFMLSQSKTAGSVGVFWFNPSETFVDI 412          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPS0_CAFRO)

HSP 1 Score: 183 bits (464), Expect = 1.070e-48
Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 1
Query:  175 RYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQG---------KDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
            R + +VR+ PF  D+Y+  +  V+ N +G  +FE  R +++AAA     A G       G+++ D+GEDG  IY DG     ++     E A A  QG           ES  G+  ESF GH D++P GPTSVG+D  FPGS HVYGIPEHA +++L+ T          + A  H SEPYRLY LDVFEYEL +  ALYG+IPVM+ H +G+TAGVFW NP+ETFVDV
Sbjct:  155 RQLAAVRFAPFSVDVYSEGKHVVAVNSQGNFYFEHRRVQNEAAAEAASAALGSGGSAGSGRRILDWGEDGKPIYADG-----DDDAASAEAAPAEGQGDASGTQLLSNSESEEGMGAESFGGHTDNRPHGPTSVGVDTAFPGSTHVYGIPEHADTLALRATA------PGSSEAGAH-SEPYRLYNLDVFEYELHNPMALYGSIPVMIAHGQGRTAGVFWNNPSETFVDV 372          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Ganab (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QL50_9DINO)

HSP 1 Score: 181 bits (460), Expect = 4.760e-48
Identity = 105/230 (45.65%), Postives = 138/230 (60.00%), Query Frame = 1
Query:  175 RYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQG---------KDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
            R + +VR+ PF  D+Y+  +  V+ N +G  +FE  R +++ AA     A G       G+++ D+GEDG  IY DG     ++     E A A  QG           ES  G+  ESF GH D++P GPTSVG+D  FPGS HVYGIPEHA +++L+ T          + A  H SEPYRLY LDVFEYEL +  ALYG+IPVM+ H +G+TAGVFW NP+ETFVDV
Sbjct:   87 RQLAAVRFAPFSVDVYSEGKHVVAVNSQGNFYFEHRRVQNEVAAEAASAALGSGGSAGSGRRILDWGEDGKPIYADG-----DDDAASAEAAPAEGQGDASGTQLLSNSESEEGMGAESFGGHTDNRPHGPTSVGVDTAFPGSTHVYGIPEHADTLALRATA------PGSSEAGAH-SEPYRLYNLDVFEYELHNPMALYGSIPVMIAHGQGRTAGVFWNNPSETFVDV 304          
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Match: Gal_mutarotas_2 (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAN2_BRELC)

HSP 1 Score: 181 bits (458), Expect = 7.460e-48
Identity = 106/216 (49.07%), Postives = 131/216 (60.65%), Query Frame = 1
Query:  202 PFQADLYAGDELAVSANRRGLMHFEQTRGKDDAAAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDH----VYGIPEHAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV 837
            PF  DLY   E  VS+N  GL H+E  R   +A    +  A    VD H+GK + DYGEDGLAIY+DGT +T+EEH       E    G D++  G WEESFDGH D K  GP+S+G+DV F GS      +YGIPEHA    LK T       +A T      ++PYRLY LDVFEYELD+  ALYGAIPV++   +  T G+FW NP+ETFVD+
Sbjct:  176 PFGVDLYLDGEKVVSSNDNGLFHYE-IRHSSNAVVQSDEVADQLAVDAHQGKTIVDYGEDGLAIYDDGTVQTKEEHAVT----ETTTIGTDQTAEG-WEESFDGHTDKKKFGPSSIGLDVTFHGSAEAPRSLYGIPEHATDFGLKDTIESSEDGEAYTVV----TDPYRLYNLDVFEYELDNPMALYGAIPVLVAPNKKNTVGMFWNNPSETFVDI 381          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9838.17922.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Gal_mutarotas_28.370e-18795.77domain-containing protein (Fragment) n=1 Tax=Ectoc... [more]
Hypothetical8.040e-5945.58protein n=2 Tax=Rhizochromulina marina TaxID=10348... [more]
Gal_mutarotas_28.010e-5752.14domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical2.530e-5450.44protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Alpha-glucosidase5.090e-5148.67II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A8... [more]
Hypothetical6.540e-5042.56protein n=1 Tax=Coccolithus braarudii TaxID=221442... [more]
Alpha1.220e-4949.551,3-glucosidase n=2 Tax=Fistulifera solaris TaxID=... [more]
Gal_mutarotas_21.070e-4846.09domain-containing protein n=2 Tax=Cafeteria roenbe... [more]
Ganab4.760e-4845.65protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
Gal_mutarotas_27.460e-4849.07domain-containing protein n=1 Tax=Bremia lactucae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9838contigEcto-sp9_F_contig9838:256..4946 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.1
Seed ortholog evalue2.9e-42
Seed eggNOG ortholog4787.PITG_11712T0
Preferred nameROT2
KEGG rclassRC00028,RC00049,RC00077
KEGG koko:K01187,ko:K05546
KEGG ReactionR00028,R00801,R00802,R05980,R05981,R06087,R06088
KEGG Pathwayko00052,ko00500,ko00510,ko01100,ko04141,map00052,map00500,map00510,map01100,map04141
KEGG ModuleM00073,M00074
GOsGO:0000271,GO:0000902,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005788,GO:0005975,GO:0005976,GO:0006073,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009250,GO:0009272,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009826,GO:0009987,GO:0010035,GO:0010038,GO:0010383,GO:0012505,GO:0015926,GO:0016043,GO:0016049,GO:0016051,GO:0016787,GO:0016798,GO:0017177,GO:0019538,GO:0030243,GO:0030244,GO:0030587,GO:0031288,GO:0031974,GO:0032502,GO:0032989,GO:0032991,GO:0033692,GO:0033919,GO:0034406,GO:0034637,GO:0034645,GO:0036211,GO:0040007,GO:0042221,GO:0042546,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043687,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048589,GO:0048856,GO:0048869,GO:0050896,GO:0051273,GO:0051274,GO:0051278,GO:0051703,GO:0051704,GO:0051707,GO:0060560,GO:0070013,GO:0070085,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071966,GO:0090599,GO:0090600,GO:0090702,GO:0098542,GO:0099120,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the glycosyl hydrolase 31 family
EggNOG OGs3Q7EN@4776,COG1501@1,KOG1066@2759
Ec32 ortholog descriptionGlycoside hydrolase family 31
Ec32 orthologEc-04_003740.1
EC3.2.1.20,3.2.1.84
COG Functional cat.G
CAZyGH31
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size852
Cds size852
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9838.17922.1prot_Ecto-sp9_F_contig9838.17922.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9838 256..4946 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931077.332007-CDS-Ecto-sp9_F_contig9838:255..5121622931077.332007-CDS-Ecto-sp9_F_contig9838:255..512Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 256..512 +
1692279022.2124739-CDS-Ecto-sp9_F_contig9838:255..5121692279022.2124739-CDS-Ecto-sp9_F_contig9838:255..512Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 256..512 +
1622931077.3489037-CDS-Ecto-sp9_F_contig9838:1925..20281622931077.3489037-CDS-Ecto-sp9_F_contig9838:1925..2028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 1926..2028 +
1692279022.2272408-CDS-Ecto-sp9_F_contig9838:1925..20281692279022.2272408-CDS-Ecto-sp9_F_contig9838:1925..2028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 1926..2028 +
1622931077.3613708-CDS-Ecto-sp9_F_contig9838:3075..31901622931077.3613708-CDS-Ecto-sp9_F_contig9838:3075..3190Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 3076..3190 +
1692279022.2372909-CDS-Ecto-sp9_F_contig9838:3075..31901692279022.2372909-CDS-Ecto-sp9_F_contig9838:3075..3190Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 3076..3190 +
1622931077.3793566-CDS-Ecto-sp9_F_contig9838:4208..43041622931077.3793566-CDS-Ecto-sp9_F_contig9838:4208..4304Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 4209..4304 +
1692279022.2466097-CDS-Ecto-sp9_F_contig9838:4208..43041692279022.2466097-CDS-Ecto-sp9_F_contig9838:4208..4304Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 4209..4304 +
1622931077.3949692-CDS-Ecto-sp9_F_contig9838:4665..49461622931077.3949692-CDS-Ecto-sp9_F_contig9838:4665..4946Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 4666..4946 +
1692279022.2568507-CDS-Ecto-sp9_F_contig9838:4665..49461692279022.2568507-CDS-Ecto-sp9_F_contig9838:4665..4946Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9838 4666..4946 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9838.17922.1

>prot_Ecto-sp9_F_contig9838.17922.1 ID=prot_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=284bp
QPPDVFLEHQLEAAEHTLLSPGDSSLPPALQELPEGWRGVLAAYGKLGEN
VAGGGGSGRYVLSVRYEPFQADLYAGDELAVSANRRGLMHFEQTRGKDDA
AAAGEGGAGGKTVDLHRGKKVKDYGEDGLAIYEDGTRETQEEHNRLLEEA
EAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPE
HAASMSLKTTTTPPTTPDAETAAPPHFSEPYRLYTLDVFEYELDSSAALY
GAIPVMLGHRRGQTAGVFWFNPTETFVDVEQGV*
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mRNA from alignment at Ecto-sp9_F_contig9838:256..4946+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9838.17922.1 ID=mRNA_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4691bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9838:256..4946+ (Ectocarpus species9 EcSCA_722f female)
CAGCCTCCGGACGTGTTCCTAGAGCACCAGCTGGAGGCAGCGGAGCACAC GCTGCTGTCCCCGGGTGATTCTTCTCTCCCGCCCGCCTTGCAAGAGTTGC CCGAAGGCTGGCGAGGAGTGCTGGCGGCCTACGGCAAGTTGGGCGAAAAT GTTGCCGGCGGCGGCGGAAGCGGGCGTTACGTGCTGAGCGTGCGGTACGA GCCGTTCCAGGCGGACCTCTACGCCGGGGACGAGCTCGCCGTCTCTGCCA ACAGGAGGTAAAGGGGGCGTGTGAATGAAGAAGCGACGTTACTGTTTTAT GTATGTAGGTGACAAAATATATCACACTCCCTTTGGAACCGATTTTTCTT AGCTCGATTTCTCCACGGCACAATGACCGGCAGCGCCGACAAAACGGCGG CGTCGGAACCGTCCCGTCGAGATCGATCCTCCCGAAAACGTACCACTTGA TTTTGGCATCCTCTTCGTCATATGGAATGACCGGGCTTTGAAATCGGTCC AGGGGATGTGGAATCCCTGTCCCGTGTTTCGTCGGTGATCGCCGCACGGG TCCACCGGCCACATGCCCCCGTTGGGGTAGGTTATATGGACATAGACCGG CGTCTTCAGTTGATGAGGAACACCGTGGAGGTTCTAAGGTCTTAATTGTG TGTATCAGAGCGCGCGTTGTTGGCGTAGACCTGCGTCATCAGTTGAGGGG GGGGAAACATGGGGGTCCTTAACGTCTAGTGTGTGTGGCAGAGCGCTACT ATGGACATAGCCTGCGTCGTCAGTTGAGGGAACACCATGGAGATTCCAAG GTCTTAATTGTGTGTAAGCAGAGCGCGCAACAGGTTAGGCGGTCTGGCCT CCACGGCTTGGTCAGACGGAAGACTACACCGTACCTTGTTGGACTTCCGC TGTGTGTGCGTTTTGCTATCCCCATCTACTCTGGACGTTGGTCTTTTTAA CACCTTCGGGTATAGTCTCATGCTTAGATATTTTTTTTTCTGAACTCATC AGCCTGAGTCACGCAGCAGGGGGAGGGCCGAACAAGAGCTATTGCGTCTT TCCTTTCTCCGACACTTGTATTCTGCCTTGCTTGCTGAAACAACTACGAA GCAAATAGTAGAGACGATACAAGTGTTTGGAGCCTTCCCGTGCGCTGTGA CCTTGGTTACCGTGGGGGGGCTCTGTCGTGACCCTTGAGAACGAAACGCG CCAAACGTTCACCATACCGCCGACCGAATACTGCGTGACACAGATTAGTT TTTTTGCCAATCCAACGTATTTATGGTCTGCGGTCTTTACAAACCGTGCC AGGACCTGATTTTTTTGGAGAATACAAACTGTGCCGGAATCTGAGTACAA TTTTGTGCCGGGTGCCCGCGCTCTCCTGCCCGTGGAATGTGGACGGTAGC ACATGCCAGCACTAAACACGGAGCCCCCCTGATGACGAACAACTTCTGGT TCATCCTCATGAAACGTAGCCTGGGCCGGCGAAAACCCGGCATATCGCTC CGTCCCGGTGATGTAGGGATGCGAAGTCAATTGTCTAACGACTACGGCAT GCGTTTGCATGAGAGAGAGAGTGCACCCCGCTCCTACCACTAACCTCAAG TCCATCCTTTGTTGGCTCCCGCCCCCTGGACGGTTTCCGTTCTTTTTCCG CACGGCGGCGGCGGCGGCAGAGGGCTGATGCACTTCGAGCAAACTCGGGG CAAGGACGACGCTGCCGCTGCGGGGGAAGGCGGTGCGGGGGGCAAGACCG TCGACCTGCACCGTGGCAAGAAGGTGTGCCAAAGCTCCCGTCTTTTTTGT TTGCCTCCGTTACCGTTCACCGGGGCACCGCTGGCGCACTCGTAGGGGGG GGGCTGTTCATGCACGGCCGGAGAAGGCTGCGCTTTGTGAGGCTGCGTTG ATACTGCCGCTGCTGTTGCTGCTGCTGCTAGTGCTGTCATGGGGGTGTTG TCCTAACGCTGTCTGCTTTGCGTTCGTATCTGATTTGGACACCGCCCGGA GTGTTTACGAGGTTAGTGTACGGTCAGGGCGGTCCGGTGGAGGGGTGTTT TTGCGGCTTGCCTTATTCTTTCTCTCTCCCCGTCTCTCTCTGCTTTGAGA ATTAAGGGTACTCGTCGGTGCATGCGTTTTCTCAGTCTGGACGCTAGTTG GCCACTACTGACTCGTCATGCATCCTGGCAGCAACAAGCGTGTCACGATG CAGGCGATTTATTGTAGAGGTAGGCGGCCGTTACAATAGGAGGAAGAGGT TGATGACGGGGACGGCATGCCCAACAGGTCGGCGTCATTTTCTGTCACCA ACTATTTGAAACACCGATGTGTCCCCGATGCTGCGTCGGGATTCTACAGT AGTATGTGGACACTCGACTCTCGCTTCAAGGACCCTTCTCAAATCGCGAA AACAGTTAGTGCCCTTTATCGAGGACGATGGTGTGTAAGGTGTACTCCCC TAATCGGTTTGCGCTTCACAGGCACAATACTGATAAAAAGCGATATCGGC GAGGACCTAGGCGCGAAAAACACTTGTGCCTACCATCTTGCTCTCTTTCC CTTTTCTTGCGTGCTGCAAAACACAACGGCGCGACAAAGTTGTGCCGATA TATTTTTACCATCCTTTTCTCTTTCCCTTGTCTTATTTGCTGCGAAAAAC AACGGCGCGCCATAAGTGCGCCGATTTTTTTTTCTATCTTGCTTTCTTTC CCTTGATTCAGCACACGACGGCGCGACAAAAGTGTTCCGATTTTATGTTT GTCTCTTGCTCTCTCTTGCTCTCTCCTTCCCTCACCTTGACTCGTCTGCT GCTGCGATGTCAACATAAAGGTGAAAGACTATGGGGAGGACGGTCTGGCG ATCTACGAGGATGGCACGAGGGAGACGCAGGAGGAGCACAACAGGCTCCT CGAGGAGGCCGAGGCGGCGAGGCAGGGCAAGGACGGTGAGGTCATGTTGG GCGGTTGGAGGTGGTGGTGGTAGTGGTGGCGGTGGTGGTGGTGTTAAAAA AGGACGGTGAGATGATGGGCGGATGGATTATACCGTCAAGATCCTGGCGT TGCTGGAGATGGCCGTGGCGGTGGCGGTGGTTGTGTCAGTGGTGGTGATG GGTTTGAGAGTAATGTGATATTTTTTCTTGTTTTTGATTTTTAATGTTGG TCGCCAAGCCTCGCACCTGCTTGCGAAGGCAGGAACTGTTGTCCTTTGGC GGTGTTGCTGTCTTCTGCGCTGACGCTGATCGAACGTCAGTAAACAGCCC TGCCCGGATTCAATAGCTGTGACGTACTATTCCTATGTCGTCCAAGCCAG CACTTCCACGACGGTAAAGGATACTTGAAAGAACTAATTTGCTCGTCTGT TGCTGCTATATAATTACTGGAGACCGCGACGAATCGCACGCGCACAGATC GGGTTTTTCGGTATCCCAGATTCCCGGCAATACGGAAGGTTTTCCAGAGC CTTGTCAACGTCTTGCCTTTGGCTTGAGTTTTCGCGCCCATGTACCAGAC AATCGCAGGCGGTGATGCTGGCACACACACCATTTCCCCCCCATGTTGTC TCGCCGCGGCCCCCCATCGACAGGCCACCCTTTTTCATCGCGCCACAGGA TAGATAATCAACCGCCGCCGCCGCTGCTGTAGTTTGCTGTTGGGGTGCGT AGGAGGCGCCGTGGTTTCGGGGGCACACACACTCACCGAGTCTCGTATTT TGACACACAAAACCCGATACTCGCAGCCTCCCACTGCTGAGGCTTCCCTG CACAGCTTTCGGCTTGGCTATTTCGCTGTGTTTTTTCTGACTTCCTGTCT CTTTTTTGTCTTTCTACCCGTCTGTCTCTGCCTGCCTGCCTTCCTTTCTT CCTTTCACGGTACGATGCCTGCCTTCCACGGCACGATGCCTGCCTTCCGG CACAATGAATGGTGGGGGTGGGGGTGTGTGCGATGGTGCTGGGGTGGTGG CAGAGAGCGGATTGGGTCTTTGGGAGGAGAGCTTCGACGGACATCCCGAC AGCAAGCCCGATGGTCCCACCAGTGTGGGCATGGACGTGTACTTCCCAGG TAAGAAAACAAATCCATGTGTGTGTGTCTTTCTCTTTAGCATCGACGGCG CTAACCGGCTGATGTGTGTGTATTTGTGTATATCTTTAATGCTAGCATCG GCCGCGCTAACCGGGTGACGTGTGTGTGTACGTCTTTGTTTCTAGCATCG ACCGCGCTAATGGGCTGACCAGACTCCGTGTGGTGGAAAACGGATAATGT TCTAAAGACGGTGTGTGTGAGAGAGAGAAAGAGATAGAGGGGGGAGAGTC GAGAGTAGGCTATATAATCATCATCTCTGGGGTTTCCACCTGTTGCGTGA TACCGTATGTTGATACATTGGGTCGTGACTCAACGTTAACCACGGCGCCC ACCCCGGCAGGTTCCGACCACGTCTACGGCATCCCGGAGCACGCGGCCTC GATGTCCCTCAAGACCACCACCACGCCCCCCACCACCCCCGACGCAGAAA CCGCGGCGCCCCCGCACTTCTCGGAGCCGTACCGGCTGTACACCCTCGAC GTGTTCGAGTACGAGCTGGACTCGTCCGCCGCTCTGTACGGAGCGATACC CGTCATGCTGGGGCACCGCAGGGGGCAAACCGCGGGGGTGTTCTGGTTCA ACCCCACGGAGACTTTCGTCGACGTAGAGCAAGGTGTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9838:256..4946+

>mRNA_Ecto-sp9_F_contig9838.17922.1 ID=mRNA_Ecto-sp9_F_contig9838.17922.1|Name=mRNA_Ecto-sp9_F_contig9838.17922.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9838:256..4946+ (Ectocarpus species9 EcSCA_722f female)
CAGCCTCCGGACGTGTTCCTAGAGCACCAGCTGGAGGCAGCGGAGCACAC
GCTGCTGTCCCCGGGTGATTCTTCTCTCCCGCCCGCCTTGCAAGAGTTGC
CCGAAGGCTGGCGAGGAGTGCTGGCGGCCTACGGCAAGTTGGGCGAAAAT
GTTGCCGGCGGCGGCGGAAGCGGGCGTTACGTGCTGAGCGTGCGGTACGA
GCCGTTCCAGGCGGACCTCTACGCCGGGGACGAGCTCGCCGTCTCTGCCA
ACAGGAGCAGCCTCCGGACGTGTTCCTAGAGCACCAGCTGGAGGCAGCGG
AGCACACGCTGCTGTCCCCGGGTGATTCTTCTCTCCCGCCCGCCTTGCAA
GAGTTGCCCGAAGGCTGGCGAGGAGTGCTGGCGGCCTACGGCAAGTTGGG
CGAAAATGTTGCCGGCGGCGGCGGAAGCGGGCGTTACGTGCTGAGCGTGC
GGTACGAGCCGTTCCAGGCGGACCTCTACGCCGGGGACGAGCTCGCCGTC
TCTGCCAACAGGAGAGGGCTGATGCACTTCGAGCAAACTCGGGGCAAGGA
CGACGCTGCCGCTGCGGGGGAAGGCGGTGCGGGGGGCAAGACCGTCGACC
TGCACCGTGGCAAGAAGAGGGCTGATGCACTTCGAGCAAACTCGGGGCAA
GGACGACGCTGCCGCTGCGGGGGAAGGCGGTGCGGGGGGCAAGACCGTCG
ACCTGCACCGTGGCAAGAAGGTGAAAGACTATGGGGAGGACGGTCTGGCG
ATCTACGAGGATGGCACGAGGGAGACGCAGGAGGAGCACAACAGGCTCCT
CGAGGAGGCCGAGGCGGCGAGGCAGGGCAAGGACGGTGAAAGACTATGGG
GAGGACGGTCTGGCGATCTACGAGGATGGCACGAGGGAGACGCAGGAGGA
GCACAACAGGCTCCTCGAGGAGGCCGAGGCGGCGAGGCAGGGCAAGGACG
AGAGCGGATTGGGTCTTTGGGAGGAGAGCTTCGACGGACATCCCGACAGC
AAGCCCGATGGTCCCACCAGTGTGGGCATGGACGTGTACTTCCCAGAGAG
CGGATTGGGTCTTTGGGAGGAGAGCTTCGACGGACATCCCGACAGCAAGC
CCGATGGTCCCACCAGTGTGGGCATGGACGTGTACTTCCCAGGTTCCGAC
CACGTCTACGGCATCCCGGAGCACGCGGCCTCGATGTCCCTCAAGACCAC
CACCACGCCCCCCACCACCCCCGACGCAGAAACCGCGGCGCCCCCGCACT
TCTCGGAGCCGTACCGGCTGTACACCCTCGACGTGTTCGAGTACGAGCTG
GACTCGTCCGCCGCTCTGTACGGAGCGATACCCGTCATGCTGGGGCACCG
CAGGGGGCAAACCGCGGGGGTGTTCTGGTTCAACCCCACGGAGACTTTCG
TCGACGTAGAGCAAGGTGTGTGAGTTCCGACCACGTCTACGGCATCCCGG
AGCACGCGGCCTCGATGTCCCTCAAGACCACCACCACGCCCCCCACCACC
CCCGACGCAGAAACCGCGGCGCCCCCGCACTTCTCGGAGCCGTACCGGCT
GTACACCCTCGACGTGTTCGAGTACGAGCTGGACTCGTCCGCCGCTCTGT
ACGGAGCGATACCCGTCATGCTGGGGCACCGCAGGGGGCAAACCGCGGGG
GTGTTCTGGTTCAACCCCACGGAGACTTTCGTCGACGTAGAGCAAGGTGT
GTGA
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