mRNA_Ecto-sp9_F_contig9837.17921.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9837.17921.1
Unique NamemRNA_Ecto-sp9_F_contig9837.17921.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D6_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 1.060e-144
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 681
            QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVK QLE
Sbjct:  247 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKVQLE 473          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triosephosphate/phosphate (translocator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK2_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 1.310e-129
Identity = 210/233 (90.13%), Postives = 214/233 (91.85%), Query Frame = 1
Query:    7 VKGAEPL--------FTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 681
            VKG  P+          + +S  AG+    QVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE
Sbjct:   46 VKGTTPVAMAHTMAHLAAVVSIGAGAVGFVQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 278          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triosephosphate/phosphate (translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU6_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.530e-71
Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSF-LAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQ 627
            QIVK AEPLFT+ LS  L G  + W VY TLLPVV GVA+AS  E+SFSA A  AAM SN  AA+RSV+GK  M ++K  G  M AGNLYAVMTM+   VLTP AL +EGP++  +W AA++AG S   L +++ LSGVFFYLYNEV+FY LN IHP+TH +GNT+KRVVMI VSV+  +HRFTPLG+ G  TAIGGV+ YS+ K   ++
Sbjct:   62 QIVKAAEPLFTAALSAALLGQVLAWPVYLTLLPVVAGVAVASLQELSFSATALAAAMCSNTFAATRSVIGKRAMGRDK--GENMDAGNLYAVMTMMATCVLTPLALVLEGPKLRGLWAAAVAAGASPGRLWRDIALSGVFFYLYNEVAFYCLNAIHPLTHGIGNTIKRVVMIAVSVIAFHHRFTPLGVVGSATAIGGVLLYSIVKGHYDE 269          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triose-phosphate (transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.780e-60
Identity = 114/205 (55.61%), Postives = 145/205 (70.73%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLS-FLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
             +VK  EPLFT+ LS  L    MP  VY +LLPVVGGVA+AS  E+SFS +AF  AM SN +AA+R VL K  M + +     M  GNLY VMT++   +L PAAL VEGPR+ +VW AA +AGH+ R++ + ++LSG++FYLYNEV+FY LN I   THA+GNT+KRVV++ VSVLV  H+ TPLG  G   AIGGV+ YSLTK
Sbjct:  113 HVVKALEPLFTAALSALLLQKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPN--MDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSLTK 315          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 4.240e-60
Identity = 115/205 (56.10%), Postives = 144/205 (70.24%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
            QIVK  EPLFT+  S L  G      VY  LLPVVGGVA+AS  E+SF+ LAFG AMTSN +AASR VL K  M K K  G  M AGNLY VMT+L  ++L P A  VEG ++  +++ A++AGH++++L K  LLSG+FFY+YNEV+FY L+ IHPVTHA+ NT+KRV +I VS+LV  H+ TPLG  G   AI GV+ YSL K
Sbjct:  201 QIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKELSFTWLAFGGAMTSNVAAASRGVLAKASMDKPK--GENMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYDTAIAAGHTKKTLAKGALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLTPLGSIGSAVAIAGVLLYSLAK 403          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 2.470e-51
Identity = 102/210 (48.57%), Postives = 140/210 (66.67%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSF-LAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQ 627
             IVK AEP+FT+G S  L G      VY +LLP++ GV++AS  E+SFS +AFG AM SN ++A R +LGK  M K    G  M   NLYAV+T+L    L+P AL VEG +    W+AA++AG + + L   +LLSG+F+YLYNEV+F AL+ ++PVTHA+GNT+KRVV+I+ + +      TPL +AG T A+ G + YSL KA  E+
Sbjct:  199 HIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPV--GENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEK 406          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP14_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.530e-50
Identity = 98/205 (47.80%), Postives = 142/205 (69.27%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
             IVK +EP+ ++GL+ +     MP  VY +L+P++GGVA+AS  E+SF+ LAFGAAM SN ++ASR++L K  ++  K  G  +   NLYAV+T+L   +L P AL  E   + SVWNAA+++G + + L + +  SG+ +YLYNEV+F AL+ + PVTHA+GNT+KRVV+I+ S++V N + TPLG AG   AI G + YSL K
Sbjct:  173 HIVKASEPVVSAGLTAIFLKQIMPLPVYLSLVPIIGGVALASVTELSFTWLAFGAAMMSNVASASRAILSKTVLSG-KPMGENLTPQNLYAVLTILSFFMLLPMALAFEAGSIQSVWNAAVASGLTPKYLAQTIAASGILYYLYNEVAFLALDSVAPVTHAVGNTIKRVVIILASIVVFNTQLTPLGAAGSGIAIAGTLMYSLAK 376          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 170 bits (431), Expect = 7.420e-48
Identity = 100/205 (48.78%), Postives = 137/205 (66.83%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
             IVK AEP F++ +S +   S  P  VY  LLPVVGGV +AS  E+SFS +AF  AM SN + + R++  K   A EK  G  M A NLY V+T++  L+L P AL +EG ++   W AA++AGH+   L+K  L+SG+F+YLYNEV+F  L+ +HP+THA+GNT+KRVV+I+ SV+V   + TPL   G + AI GV+ YSL K
Sbjct:  164 HIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSK--KAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAK 366          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Plastidic (triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 7.830e-48
Identity = 99/205 (48.29%), Postives = 138/205 (67.32%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
             IVK AEP FT+  S +      P  VY +L+PVV GVA+AS  E++FS  A   AM SN +A+SR++L K  M + K  G  M A NLY V+T+L   +L P A  +EGP+ ++ W+AAL  G+SQ ++ K+ LLSG++FYLYNEV+F AL+ +HPV HA+GNTLKRV +I   V++  ++ TPLG+ G + AI GV+ +SL K
Sbjct:  177 HIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPK--GTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSLVK 379          
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M622_HETAK)

HSP 1 Score: 167 bits (423), Expect = 2.160e-46
Identity = 96/204 (47.06%), Postives = 127/204 (62.25%), Query Frame = 1
Query:    1 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
             IVK AEP+FT+G+S   G   PWQVY TL+PVVGGV +A   E+SFS  AF  A  +N   A RS LGK  M +    G  M A NL AV+ ++  ++L P  L  EG  +A  W +AL+AG+ Q  L+  +L+SG+ F LY EVSF AL+ +HP+TH+LG T KR V+I+ SV+    + TPLG  G   A+ GV  YS+ K
Sbjct:  190 HIVKAAEPMFTAGVSAAMGQFFPWQVYATLVPVVGGVGLACLKELSFSWWAFLNAALANLGGALRSALGKQLMGQAV--GENMDAKNLNAVLLLMMSVMLCPFILATEGKLLAPGWRSALAAGYPQAKLLSELLISGILFCLYQEVSFLALDNVHPITHSLGQTFKRAVLIVASVVFFGTKLTPLGALGSAVALAGVFLYSMAK 391          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TPT1.060e-14499.56domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Triosephosphate/phosphate1.310e-12990.13translocator n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
Triosephosphate/phosphate1.530e-7160.00translocator n=1 Tax=Tribonema minus TaxID=303371 ... [more]
Triose-phosphate2.780e-6055.61transporter family-domain-containing protein n=1 T... [more]
TPT4.240e-6056.10domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
TPT2.470e-5148.57domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical5.530e-5047.80protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
TPT7.420e-4848.78domain-containing protein n=2 Tax=Diacronema luthe... [more]
Plastidic7.830e-4848.29triose-phosphate/phosphate translocator n=1 Tax=Tr... [more]
Hypothetical2.160e-4647.06protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9837contigEcto-sp9_F_contig9837:340..2201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue1.5e-102
Seed eggNOG ortholog2880.D8LKK2
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15285
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-16_003270.1
Exons3
Model size682
Cds size681
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9837.17921.1prot_Ecto-sp9_F_contig9837.17921.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9837 340..2200 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931077.2526264-CDS-Ecto-sp9_F_contig9837:339..5731622931077.2526264-CDS-Ecto-sp9_F_contig9837:339..573Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 340..573 +
1692279022.1764266-CDS-Ecto-sp9_F_contig9837:339..5731692279022.1764266-CDS-Ecto-sp9_F_contig9837:339..573Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 340..573 +
1622931077.2711139-CDS-Ecto-sp9_F_contig9837:1048..12391622931077.2711139-CDS-Ecto-sp9_F_contig9837:1048..1239Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 1049..1239 +
1692279022.1891189-CDS-Ecto-sp9_F_contig9837:1048..12391692279022.1891189-CDS-Ecto-sp9_F_contig9837:1048..1239Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 1049..1239 +
1622931077.2865767-CDS-Ecto-sp9_F_contig9837:1944..22001622931077.2865767-CDS-Ecto-sp9_F_contig9837:1944..2200Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 1945..2200 +
1692279022.200446-CDS-Ecto-sp9_F_contig9837:1944..22001692279022.200446-CDS-Ecto-sp9_F_contig9837:1944..2200Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9837 1945..2200 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9837.17921.1

>prot_Ecto-sp9_F_contig9837.17921.1 ID=prot_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=227bp
QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSAL
AFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVL
TPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYA
LNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAY
SLTKARLEQAGVVVPVGKVAAVKAQLE
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mRNA from alignment at Ecto-sp9_F_contig9837:340..2201+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9837.17921.1 ID=mRNA_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1862bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9837:340..2201+ (Ectocarpus species9 EcSCA_722f female)
CAGATCGTGAAGGGCGCGGAGCCGCTGTTCACGTCAGGGCTATCGTTCCT GGCGGGGTCGGCGATGCCGTGGCAGGTGTACACCACTCTCCTGCCCGTGG TCGGGGGCGTGGCCATGGCCTCGGCGGGGGAGATCAGCTTCAGCGCGCTC GCCTTCGGGGCGGCGATGACGTCTAACGCCTCCGCGGCCTCTCGGAGCGT TCTCGGAAAAATCTTCATGGCCAAGGAGAAGGAGGTGTGGGGGGGAACGT GTTTGTGGGTTGTTTGGTGGTGGTGGTAGTGGTGTTGTGGTCATGTTTGT CGTTATTATTATTGTTGTTGTTCGTTGTTGCCGTCGTCAATGTTGTGTGA TCTTCATGGTCACGGAGAAGGAGGTATGGGGGGGGACGTGTTTGTGGGTT GTTGGTTGTTTTGGTGGTGGTGGTGGTGGTGGTGTTGGTGTTGTTGTGTT TGGTGTTTGTTGTTGTTGGTGGTGGTGTTGTTCGTTGTTGTCGTCGTCAA TGTTGCGTGTGGTGGTGGTGTGGTGGGTAACCTGCTGACGCGCGCTGTCT ACAACCCCGCATGTCTCGCTTACCATCGGCACCGTGACGCGGCACGCATC CTTACTCTTGAAACCCTTGGAAAAAACCATCCTCCCAGAAGGACACTTTT GCTGGTCGTTGGTTCGTGAAACACCGTGGTCGTCTCTGCTTCCTTGCCGC TATTCGCAGAACGGGGGAGCGATGTGCGCGGGAAACTTGTACGCCGTGAT GACCATGCTGGGGTGCTTGGTCCTGACACCCGCCGCCTTGTGGGTGGAGG GGCCGAGGGTGGCGAGCGTTTGGAACGCGGCGTTGAGCGCAGGGCACAGC CAGCGAAGCCTCGTCAAGAACGTCTTGTTAAGCGGGGTGTTTTTCTATTT GTGAGTGTCCTCTTTTTCTGTCGTTTGTTTTGGTGCGCCTACCGTATTCT CCTTGCCACGAGCTCCAACATTTTTTTTACTACTTTTCCCCCTTTTTTCT CGTTGTGTGTCTTGACGACAAATCGAACGCACACGTTGTTTGTCTGTTGG CGAAAGGTTCTTTCGTTATTGTCATTGTTTAGGTGCACATATCTTCTACC AACGTAAGAAAAAATATCGATTAGTGTTCGCCCAATTGTAAAAAGAGACA AACTCGATCTATCTCTGGATGCAACGTGTGCAGCCTGTGGTAATTAAGGG CCCCCTGTCTTTCTCGGCGGGATGATGTCAATCTGACGTGAAAATCTCCC TGCTGGATACGATCGCAAGTGTGCATACGCCGTGATAGCTTTCTGTTGGC GTGCGGTATTGGTTTGGGAGTTTAGATTTGTTTGTCTGGCACATGCAAGC ATGGGCTTGTGCGATTTAGGCACCGTAATACGCCCTGGTTTCGGATTTCG GCCCTGAAATGGTTCTTTGTAGAAAAACACCATCAGAAGTGGAGACCCCG TCTTGGTGCTCCAGGGGATGTAGCAAATGAAGGGTTGAATCAGAGCAAGG ATTAATCACCCTTTCCCCTCCCTCTCGCCGTCCACACATGTAAACCGGTG TGTGCATGTACGTGTGTTTTGCGCGTGTGTGCTTTCAATGACCCGCCACC ATCAGGTACAACGAGGTGTCGTTCTACGCGCTCAACATCATCCACCCGGT GACGCACGCGCTCGGCAACACCCTGAAGCGCGTGGTGATGATCATCGTCA GCGTCCTGGTCCTGAACCACAGGTTCACCCCCCTGGGGCTGGCCGGCTGC ACGACCGCTATCGGCGGCGTGATGGCCTACTCGCTCACCAAGGCCAGGCT CGAGCAGGCCGGAGTGGTCGTTCCCGTGGGAAAGGTGGCCGCCGTTAAGG CGCAGCTCGAGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9837:340..2201+

>mRNA_Ecto-sp9_F_contig9837.17921.1 ID=mRNA_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1362bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9837:340..2201+ (Ectocarpus species9 EcSCA_722f female)
CAGATCGTGAAGGGCGCGGAGCCGCTGTTCACGTCAGGGCTATCGTTCCT
GGCGGGGTCGGCGATGCCGTGGCAGGTGTACACCACTCTCCTGCCCGTGG
TCGGGGGCGTGGCCATGGCCTCGGCGGGGGAGATCAGCTTCAGCGCGCTC
GCCTTCGGGGCGGCGATGACGTCTAACGCCTCCGCGGCCTCTCGGAGCGT
TCTCGGAAAAATCTTCATGGCCAAGGAGAAGGAGCAGATCGTGAAGGGCG
CGGAGCCGCTGTTCACGTCAGGGCTATCGTTCCTGGCGGGGTCGGCGATG
CCGTGGCAGGTGTACACCACTCTCCTGCCCGTGGTCGGGGGCGTGGCCAT
GGCCTCGGCGGGGGAGATCAGCTTCAGCGCGCTCGCCTTCGGGGCGGCGA
TGACGTCTAACGCCTCCGCGGCCTCTCGGAGCGTTCTCGGAAAAATCTTC
ATGGCCAAGGAGAAGGAGAACGGGGGAGCGATGTGCGCGGGAAACTTGTA
CGCCGTGATGACCATGCTGGGGTGCTTGGTCCTGACACCCGCCGCCTTGT
GGGTGGAGGGGCCGAGGGTGGCGAGCGTTTGGAACGCGGCGTTGAGCGCA
GGGCACAGCCAGCGAAGCCTCGTCAAGAACGTCTTGTTAAGCGGGGTGTT
TTTCTATTTAACGGGGGAGCGATGTGCGCGGGAAACTTGTACGCCGTGAT
GACCATGCTGGGGTGCTTGGTCCTGACACCCGCCGCCTTGTGGGTGGAGG
GGCCGAGGGTGGCGAGCGTTTGGAACGCGGCGTTGAGCGCAGGGCACAGC
CAGCGAAGCCTCGTCAAGAACGTCTTGTTAAGCGGGGTGTTTTTCTATTT
GTACAACGAGGTGTCGTTCTACGCGCTCAACATCATCCACCCGGTGACGC
ACGCGCTCGGCAACACCCTGAAGCGCGTGGTGATGATCATCGTCAGCGTC
CTGGTCCTGAACCACAGGTTCACCCCCCTGGGGCTGGCCGGCTGCACGAC
CGCTATCGGCGGCGTGATGGCCTACTCGCTCACCAAGGCCAGGCTCGAGC
AGGCCGGAGTGGTCGTTCCCGTGGGAAAGGTGGCCGCCGTTAAGGCGCAG
CTCGAGGTACAACGAGGTGTCGTTCTACGCGCTCAACATCATCCACCCGG
TGACGCACGCGCTCGGCAACACCCTGAAGCGCGTGGTGATGATCATCGTC
AGCGTCCTGGTCCTGAACCACAGGTTCACCCCCCTGGGGCTGGCCGGCTG
CACGACCGCTATCGGCGGCGTGATGGCCTACTCGCTCACCAAGGCCAGGC
TCGAGCAGGCCGGAGTGGTCGTTCCCGTGGGAAAGGTGGCCGCCGTTAAG
GCGCAGCTCGAG
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