mRNA_Ecto-sp9_F_contig9837.17921.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D6_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 1.060e-144 Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 681
QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVK QLE
Sbjct: 247 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKVQLE 473
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triosephosphate/phosphate (translocator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK2_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.310e-129 Identity = 210/233 (90.13%), Postives = 214/233 (91.85%), Query Frame = 1
Query: 7 VKGAEPL--------FTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 681
VKG P+ + +S AG+ QVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE
Sbjct: 46 VKGTTPVAMAHTMAHLAAVVSIGAGAVGFVQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQAGVVVPVGKVAAVKAQLE 278
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triosephosphate/phosphate (translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU6_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.530e-71 Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSF-LAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQ 627
QIVK AEPLFT+ LS L G + W VY TLLPVV GVA+AS E+SFSA A AAM SN AA+RSV+GK M ++K G M AGNLYAVMTM+ VLTP AL +EGP++ +W AA++AG S L +++ LSGVFFYLYNEV+FY LN IHP+TH +GNT+KRVVMI VSV+ +HRFTPLG+ G TAIGGV+ YS+ K ++
Sbjct: 62 QIVKAAEPLFTAALSAALLGQVLAWPVYLTLLPVVAGVAVASLQELSFSATALAAAMCSNTFAATRSVIGKRAMGRDK--GENMDAGNLYAVMTMMATCVLTPLALVLEGPKLRGLWAAAVAAGASPGRLWRDIALSGVFFYLYNEVAFYCLNAIHPLTHGIGNTIKRVVMIAVSVIAFHHRFTPLGVVGSATAIGGVLLYSIVKGHYDE 269
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Triose-phosphate (transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.780e-60 Identity = 114/205 (55.61%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLS-FLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
+VK EPLFT+ LS L MP VY +LLPVVGGVA+AS E+SFS +AF AM SN +AA+R VL K M + + M GNLY VMT++ +L PAAL VEGPR+ +VW AA +AGH+ R++ + ++LSG++FYLYNEV+FY LN I THA+GNT+KRVV++ VSVLV H+ TPLG G AIGGV+ YSLTK
Sbjct: 113 HVVKALEPLFTAALSALLLQKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPN--MDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSLTK 315
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE) HSP 1 Score: 203 bits (516), Expect = 4.240e-60 Identity = 115/205 (56.10%), Postives = 144/205 (70.24%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
QIVK EPLFT+ S L G VY LLPVVGGVA+AS E+SF+ LAFG AMTSN +AASR VL K M K K G M AGNLY VMT+L ++L P A VEG ++ +++ A++AGH++++L K LLSG+FFY+YNEV+FY L+ IHPVTHA+ NT+KRV +I VS+LV H+ TPLG G AI GV+ YSL K
Sbjct: 201 QIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKELSFTWLAFGGAMTSNVAAASRGVLAKASMDKPK--GENMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYDTAIAAGHTKKTLAKGALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLTPLGSIGSAVAIAGVLLYSLAK 403
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI) HSP 1 Score: 180 bits (457), Expect = 2.470e-51 Identity = 102/210 (48.57%), Postives = 140/210 (66.67%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSF-LAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTKARLEQ 627
IVK AEP+FT+G S L G VY +LLP++ GV++AS E+SFS +AFG AM SN ++A R +LGK M K G M NLYAV+T+L L+P AL VEG + W+AA++AG + + L +LLSG+F+YLYNEV+F AL+ ++PVTHA+GNT+KRVV+I+ + + TPL +AG T A+ G + YSL KA E+
Sbjct: 199 HIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPV--GENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEK 406
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP14_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.530e-50 Identity = 98/205 (47.80%), Postives = 142/205 (69.27%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
IVK +EP+ ++GL+ + MP VY +L+P++GGVA+AS E+SF+ LAFGAAM SN ++ASR++L K ++ K G + NLYAV+T+L +L P AL E + SVWNAA+++G + + L + + SG+ +YLYNEV+F AL+ + PVTHA+GNT+KRVV+I+ S++V N + TPLG AG AI G + YSL K
Sbjct: 173 HIVKASEPVVSAGLTAIFLKQIMPLPVYLSLVPIIGGVALASVTELSFTWLAFGAAMMSNVASASRAILSKTVLSG-KPMGENLTPQNLYAVLTILSFFMLLPMALAFEAGSIQSVWNAAVASGLTPKYLAQTIAASGILYYLYNEVAFLALDSVAPVTHAVGNTIKRVVIILASIVVFNTQLTPLGAAGSGIAIAGTLMYSLAK 376
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT) HSP 1 Score: 170 bits (431), Expect = 7.420e-48 Identity = 100/205 (48.78%), Postives = 137/205 (66.83%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
IVK AEP F++ +S + S P VY LLPVVGGV +AS E+SFS +AF AM SN + + R++ K A EK G M A NLY V+T++ L+L P AL +EG ++ W AA++AGH+ L+K L+SG+F+YLYNEV+F L+ +HP+THA+GNT+KRVV+I+ SV+V + TPL G + AI GV+ YSL K
Sbjct: 164 HIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSK--KAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAK 366
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Plastidic (triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA) HSP 1 Score: 171 bits (432), Expect = 7.830e-48 Identity = 99/205 (48.29%), Postives = 138/205 (67.32%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFL-AGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
IVK AEP FT+ S + P VY +L+PVV GVA+AS E++FS A AM SN +A+SR++L K M + K G M A NLY V+T+L +L P A +EGP+ ++ W+AAL G+SQ ++ K+ LLSG++FYLYNEV+F AL+ +HPV HA+GNTLKRV +I V++ ++ TPLG+ G + AI GV+ +SL K
Sbjct: 177 HIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPK--GTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSLVK 379
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M622_HETAK) HSP 1 Score: 167 bits (423), Expect = 2.160e-46 Identity = 96/204 (47.06%), Postives = 127/204 (62.25%), Query Frame = 1
Query: 1 QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALAFGAAMTSNASAASRSVLGKIFMAKEKENGGAMCAGNLYAVMTMLGCLVLTPAALWVEGPRVASVWNAALSAGHSQRSLVKNVLLSGVFFYLYNEVSFYALNIIHPVTHALGNTLKRVVMIIVSVLVLNHRFTPLGLAGCTTAIGGVMAYSLTK 612
IVK AEP+FT+G+S G PWQVY TL+PVVGGV +A E+SFS AF A +N A RS LGK M + G M A NL AV+ ++ ++L P L EG +A W +AL+AG+ Q L+ +L+SG+ F LY EVSF AL+ +HP+TH+LG T KR V+I+ SV+ + TPLG G A+ GV YS+ K
Sbjct: 190 HIVKAAEPMFTAGVSAAMGQFFPWQVYATLVPVVGGVGLACLKELSFSWWAFLNAALANLGGALRSALGKQLMGQAV--GENMDAKNLNAVLLLMMSVMLCPFILATEGKLLAPGWRSALAAGYPQAKLLSELLISGILFCLYQEVSFLALDNVHPITHSLGQTFKRAVLIVASVVFFGTKLTPLGALGSAVALAGVFLYSMAK 391 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9837.17921.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9837.17921.1 >prot_Ecto-sp9_F_contig9837.17921.1 ID=prot_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=227bp QIVKGAEPLFTSGLSFLAGSAMPWQVYTTLLPVVGGVAMASAGEISFSALback to top mRNA from alignment at Ecto-sp9_F_contig9837:340..2201+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9837.17921.1 ID=mRNA_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1862bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9837:340..2201+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9837:340..2201+ >mRNA_Ecto-sp9_F_contig9837.17921.1 ID=mRNA_Ecto-sp9_F_contig9837.17921.1|Name=mRNA_Ecto-sp9_F_contig9837.17921.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1362bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9837:340..2201+ (Ectocarpus species9 EcSCA_722f female)back to top |