mRNA_Ecto-sp9_F_contig982.17909.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig982.17909.1
Unique NamemRNA_Ecto-sp9_F_contig982.17909.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Putative (growth-on protein GRO10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2W6_ECTSI)

HSP 1 Score: 1302 bits (3369), Expect = 0.000e+0
Identity = 656/667 (98.35%), Postives = 660/667 (98.95%), Query Frame = 2
Query:  362 MGLLMLPPSSRRGSGGLSASSVTPRTLAVTMGLVLLLLAAGFDSAEAVLPTGELRLADGSTAYAAPAWFGLQLPEEKEATYLPLRVPKSDADGCGKVTVEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLSTEHSGYDGLSSSDGNLDRGAKPGQGMGDERQHQRWMGGXXXXGLPDS 2362
            MGLLMLPPSSRRGSGGLS  SVTPRTLAVTMGLVLLLLAAGFDSAEAVLPTGELRLADGSTAYAAPAWFGLQLPEEKEAT+LPLRVPKSDADGCGKVTVEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEG+YQDNSAATDKYDYEC NGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVT+ATLGTKVCCAWDMYITMYSSDPETSDKV IPSVYVTMKDGQALLEAGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGL VTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGY MLGLGDIVIPGLLLSFAHRYDLSVGL WGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLSTEH+GYDGLSSSDGNLDRGAKPGQGMGDERQHQRWMGGXXXXGLPDS
Sbjct:    1 MGLLMLPPSSRRGSGGLSPGSVTPRTLAVTMGLVLLLLAAGFDSAEAVLPTGELRLADGSTAYAAPAWFGLQLPEEKEATHLPLRVPKSDADGCGKVTVEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGIYQDNSAATDKYDYECDNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTEATLGTKVCCAWDMYITMYSSDPETSDKVGIPSVYVTMKDGQALLEAGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLGVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYAMLGLGDIVIPGLLLSFAHRYDLSVGLHWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLSTEHAGYDGLSSSDGNLDRGAKPGQGMGDERQHQRWMGGXXXXGLPDS 667          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Putative (growth-on protein GRO10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ5_9STRA)

HSP 1 Score: 528 bits (1359), Expect = 1.290e-175
Identity = 294/609 (48.28%), Postives = 393/609 (64.53%), Query Frame = 2
Query:  425 VTPRTLAVTMGLVLLLLAAGFDSAEAVLPTGELRLADGS-TAYAAPAWFGLQLPEEKEATYLPLRVPKSDADGCGKVT--VEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEA-------GEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLS 2221
            +T R ++    LVLL +     S  AVLPT +L +  G  + YAA + F   LP    A + P+ VP      C +       PP     F+++ ERG C FD KA +A+ AGA  +VV+N+ E  Y       D+ DYECGNGEGW+  + +P W   N   AC ++  C SG C++TNVTD++LGTKVCCAWD+++TM SS   T+  + +P+V++TM  G ALL         G V  +++NRP  YINLS  LLW LGVAT V+A   S  ++R      +  G  G+    GD+ +ES  L LG  HT+ F+ FASGMLL+LFFFNL  AVT ++C+SA +A +A++V PL+R AR  ++ Y       +   +    LG  S L+IA+   +  + LWW +VR+  +Y WVLQ+LFGC LC  FL+++RL +++VA  LL LAF+YDIFWVFLSP LF ESVMV VATGG+ T DP  CEKYP + GC V +LPMLL+LPR+ DY GG VMLGLGDIV+PGLLLSFA R+D + GLP  +GYFV++  GYA GL+MAN+AV +  +GQPALLYLVPCTLGL  F+++ DGTL  +W GPP+L+
Sbjct:   11 LTARLVSTASWLVLLAVLP-IVSISAVLPTAQLVVDSGEGSGYAAISSFSSVLPSSTSAAWTPMVVPSGSRTACDEALDIKASPP-----FIVVAERGECSFDFKAGSAKAAGASAIVVVNTWEATYGGREYGEDRTDYECGNGEGWLPSVTSPAWSAANDVPACSADARCASGRCMLTNVTDSSLGTKVCCAWDLFLTMGSSS-NTTLHMGMPAVFMTMAQGDALLSNSLLLEGDGAVQGKLYNRPEPYINLSCMLLWALGVATAVFAGWHSAREMRPHYKRAATAG--GLGGGAGDAADESVELTLG--HTVGFIAFASGMLLVLFFFNLSFAVTALYCVSAGSAVAAVIVAPLLRRARLCIMPYS------EDRIIPLGPLGEASVLDIAALAIAWSMTLWWALVRDAVAYDWVLQDLFGCSLCVVFLASLRLTNLRVAAVLLSLAFVYDIFWVFLSPFLFSESVMVAVATGGDSTVDPLTCEKYPDTHGCVVHTLPMLLKLPRIGDYQGGSVMLGLGDIVLPGLLLSFAARFDAASGLPLCRGYFVYVAGGYAAGLMMANLAVIMTGLGQPALLYLVPCTLGLMSFIAWADGTLPELWRGPPALA 602          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H102_9STRA)

HSP 1 Score: 447 bits (1150), Expect = 4.830e-144
Identity = 268/614 (43.65%), Postives = 369/614 (60.10%), Query Frame = 2
Query:  440 LAVTMGLVLLLLAAGFDSAEAVLPTGELRL--ADGSTAYAAPAWFGLQLPEEKEATYLPLRVPKSDADGCGKVTVEDPPEGGGGFVLLVERG-NCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVWDPLN--TDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLE------AGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSK-SGDGSSGV-VNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLS--VGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLSTEHSG 2236
            +A  MGLVL+ L    +S    LPTGE+ L    G+  Y APA F   LPEE E   L +  P +  DGC              + LLV+R  NC F+A+ALAAQ+    GL+V NS+EG+Y++ S  TDKYDYEC NG  +     T + D ++   D +C S               D+  G ++CCAWD Y+ M +SD   S  + I SV++TM D   LL        G     +++R R ++N SSFL+W +GV TV  A+ KS DDLRR+   + +GD   G       +  EE P+LEL + H   F+V AS +LL+LF+ +L L VT++FC+SAS++   +++ P+      + V             VD   +G +S L++  T+  + +A+ W   R T ++A+V Q++FG CLC  FLS IR  +++VAT LLC+AF YDIF+VF+SP  F ESVMVKVATG + T+DP +CEKYPT   C    LPMLLELPR++DYTGGY MLGLGDIV+PGLL+SFA RYD+S    +PW    ++ MV GY++GL+MAN+AVYVM+MGQPALLYLVPCTLGL +  +  +G +  +W GP   +  + G
Sbjct:   16 VASRMGLVLVTL----NSVLGALPTGEIGLHHTGGAKIYCAPAVFSPYLPEESEHLSLKIVRPTNLQDGCDPKLPTSVVANARDYALLVQRSPNCTFEARALAAQQTNVSGLIVQNSIEGIYKNRSYTTDKYDYECDNGRSYT----TSIADKMDGFPDSSCASXXXXXXXXXXXXXDVDSKKGHEICCAWDTYMVM-ASDLTQSHTITIASVFITMGDADDLLSKTSLAYGGYPSFSMYDRWRPWMNPSSFLIWAIGVFTVAIAAWKSVDDLRRKMQRRPTGDTEIGTDAKELAEEDEEVPALELTLSHAFGFIVVASTVLLILFYVDLYLLVTILFCVSASSSVGTVLLRPMFSCIFGSRVRQEL---------VDVPYIGSVSSLDMLCTVGGITMAVVWFFNRQTAAWAFVFQDIFGMCLCVLFLSVIRFSNVRVATLLLCMAFFYDIFFVFISPIFFTESVMVKVATGSQPTKDPDYCEKYPTDSECISTELPMLLELPRIFDYTGGYTMLGLGDIVLPGLLVSFAIRYDVSKRARVPWN---YILMVIGYSIGLMMANVAVYVMNMGQPALLYLVPCTLGLLMLKAKYEGNVSELWNGPSGFNDGNYG 608          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Signal (peptide peptidase-aspartyl protease family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAM5_9STRA)

HSP 1 Score: 441 bits (1134), Expect = 8.280e-141
Identity = 292/650 (44.92%), Postives = 377/650 (58.00%), Query Frame = 2
Query:  455 GLVLLLLAAGFDS----AEAVLPTG--ELRLADGSTAYAAPAWFGLQLPEEKEATYLPLRVPKSDAD---GCGKVTVEDPPEGGGG--FVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLG-TKVCCAWDMYITMYSSDP--ETSDKVD-IPSVYVTMKDGQALLEAG------------------------EVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSH-------EESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMR------WARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQV-ESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSVGLPW---------GKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSL 2218
            GLV LL  A F +       V PTG  E +   G T Y A A FG  LP +K A  L L V  +D D   GC K+ +  PP    G  F L + RG C F++KA AAQ  GA  LV+ N+ E +Y + +AAT + DYECGNG+ ++  +  P+W PLN   AC  +  C S  C+VTN TD T G T+VCCAWD+Y+TM   DP  ETS     IP+V+VTM+D +A+  A                          + V ++ R R   NL+S LLW LG  TV +A+  +      R   ++  G    +  GGD         EE+P +EL V HT+ F+V AS  L+LLF+ NL   V++++ LSA +A + IV  P  R       AR ++  Y   W               ++ LE  ST   +GL +WW +VR +  YAW+LQN+ G  LC  FLS +R P+IKVAT LL LAFLYDIF+VFLSP  F ESVM+KVATGG    D TFCEKYP  + C+V + LPMLL LPR+ DY GG+ MLGLGDI++PGLL++FA RYD ++G+           G+ YF  MV GYA+GLLMAN+AVYVM MGQPALLYLVP TLGLF+  ++ DGTL  MW GPP+L
Sbjct:   19 GLVPLLFLASFLAHPIEVAGVFPTGMLEFKSTKGYT-YCAAADFGPALPSQKNAPEL-LLVEPADPDKRNGC-KLPLVLPPTLPLGIPFALFLARGTCSFESKAAAAQAVGASLLVIYNTEESLYANKTAATPQLDYECGNGQAFLSHVADPLWSPLNDVPACAQDPRCASRRCLVTNTTDPTTGNTEVCCAWDLYMTM-GPDPAIETSLATPTIPTVFVTMRDAEAIHAAMLSSASNSGALVSPLVASAKQQQGMGLRVSVYERYRPDYNLASILLWLLGCFTVTYAAWNASRVGSWREKDRASAGREAGLMNGGDEXXXXXXXXEETPVIELSVGHTVGFIVMASSFLILLFYVNLNRVVSVLYALSAGSAVATIVAHPFFRRVLPRHLARTSIFQYR-RWDIK------------ITVLEFLSTGLGIGLGIWWFVVRASAGYAWILQNIMGVSLCILFLSLVRFPNIKVATILLSLAFLYDIFFVFLSPIFFQESVMIKVATGGAPRADETFCEKYPEDEKCRVRDMLPMLLVLPRINDYAGGFTMLGLGDIILPGLLVAFAARYDRAMGVELFAFHKCGREGR-YFRLMVIGYALGLLMANVAVYVMKMGQPALLYLVPATLGLFVSRAFKDGTLGEMWRGPPAL 650          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1D8_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 6.910e-125
Identity = 254/598 (42.47%), Postives = 352/598 (58.86%), Query Frame = 2
Query:  467 LLLAAGFDSAEAVLPTGELRLADGSTAYAAPAWFGLQLPEEK-EATYLPLRVPKSDADGCGKVTVEDPPEG---GGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWV-KDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEVDVEIFN---------RPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSL 2218
            LLLAA   +A+A +PT  L+L  G+T   APA  G  LP  K +A ++ LR     ADGC     + P       G  VL     NC F  +  AA  AG   +VV N++EG+Y++ + ATDKYDY+C  G G V K  +    D   +   C S   CDSG C++T     +   ++CCAWD Y TM S DP     +++ +V+++M+D   L  +  + +   N             +++ S  L+W LGV T  +AS KS DD+R++    +   +   +    D  E+ PS +L   H + F+V AS  L++LFFF+L + V  M+ +SA++ ++A+V  PL++   ++              TVD   +G ++ L++ S I  + +A+WWL V+N  SYAW+ Q+LFG CLC  FLS I+L S++VA+ LLC+AF YDIF+VF+SP LFGESVMV+VATG   T+D  +CEKYP    CQ +SLPMLL LPR +D   GY MLGLGDIV+PGLL++FA R D        + YF  MV GYAVGL MAN+AV   + GQPALLYLVPCTLG FL  +  DGTL+ +W GPPSL
Sbjct:    6 LLLAALAWNAQAAIPTATLKLEGGATLAVAPAALGSLLPPSKAQALHVTLRWAGGLADGCDPGVAKWPSASVRRDGVAVLAARSPNCTFSDRVQAAARAGLRAVVVYNTIEGIYRNRTYATDKYDYDCSRGSGVVSKFTKDEKMDGFRS-SPCASE--CDSGRCLLTGKKIGSTN-EICCAWDTYTTM-SGDPT----LNVDAVFISMRDADVLRASPLLQMPAPNALPSQLWDDNQEGFLSWSGVLIWLLGVCTCAYASHKSCDDVRKKRRLPTHQPA--AIEETDD--EDEPSFDLTPLHAVGFIVIASMALVVLFFFDLHMIVVFMYAVSAASTSAAVVWRPLLKKCLSSRY------------TVDLPRIGEVALLDLISGICGVTIAVWWLCVQNA-SYAWLFQDLFGICLCVLFLSVIKLSSLRVASLLLCMAFCYDIFFVFISPHLFGESVMVRVATGKAPTKDADYCEKYPDDKDCQSQSLPMLLLLPR-FDGLSGYTMLGLGDIVLPGLLVAFAARCDACA---LQRRYFPLMVCGYAVGLAMANVAVAYFAQGQPALLYLVPCTLGPFLHAAQRDGTLQTLWQGPPSL 573          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3L5_9STRA)

HSP 1 Score: 375 bits (964), Expect = 3.770e-117
Identity = 252/597 (42.21%), Postives = 338/597 (56.62%), Query Frame = 2
Query:  578 LPEEKEATYLPLRVPKSDADGCG-KVTVEDPPEGGGGFVLLVERG-NCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVWDPLN--TDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEVD------VEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDD-----LRRRSNSKSGDGSSGVVNYGGDSHE---ESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYD--LSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLSTEHSG--YDGLSSSDGNLDRGAKPGQGMG 2302
            +P +    +L L  PK  ADGC  + T E    G     LLV R  NC F  +A AA+  GA  +VV NSVEG+Y++++ AT + DY+C NG  WV  L     D L+     +C ++  C S  C+++   D T   +VCCAWD YITM  +D E +    IP+VY+TM+D   L  A EV         +F RP   +++++ ++W LGVATV  A+ ++G D      R RSN+++      V + G  SHE   E   LEL  +H L FV+ AS +L+LLF+ +L +A+TL+FC+SA    SA++V PL+  A    +                  LG  + +++ S   S  LA  W   R + S A+VLQ+LFG CLC  FL  IRLP+++VA  LL LAF YDIF+VF+SP +F +SVMVKVA+G   T D  FCEKYP+   CQ   LPMLL  PR+ DY  GY MLGLGDIV+PGLL+ F  R+D  +    P      VF   GYAVGLL+AN+AVY   MGQPALLYLVPCTLG+ +  +  DG+   MW  P   +    G  Y G ++S      GA P  G G
Sbjct:    4 IPSKGRRVHLSLVRPKGLADGCSPEFTEEALALGSESLALLVRRSSNCTFGHRAAAAEALGASAIVVANSVEGMYRNHTYATAQQDYDCSNGAAWVHSLG----DKLSGFPTSSCATDSRCSSHRCLLSGEQDETGRHRVCCAWDTYITM--ADSEMTSSGSIPAVYITMQDLDVLESATEVSSTSASTCALFLRPTVAVDIAAIIIWALGVATVALAAYRAGADEKESMQRERSNTRA------VGSLG--SHEAPREEDRLELTSQHALGFVILASAVLVLLFYVDLHVAITLLFCVSAVVCLSAVLVQPLVSKAAPRSMHRVVTVLPQ---------LGPATAVDLVSYGASSTLAAVWFATRTSWSLAFVLQDLFGVCLCLLFLQIIRLPNLRVAAQLLSLAFAYDIFFVFISPAIFKQSVMVKVASGSGPTADEDFCEKYPSDADCQSWELPMLLLFPRVGDYLEGYTMLGLGDIVLPGLLVCFVARFDALIRASPPINSALMVF---GYAVGLLLANVAVYWTGMGQPALLYLVPCTLGVLVAKTRLDGSFPRMWNAPVDDAQGGHGPRYGGGAASRAPSSHGASPPSGNG 574          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Hypothetical (protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRX7_9STRA)

HSP 1 Score: 350 bits (897), Expect = 1.730e-105
Identity = 243/679 (35.79%), Postives = 356/679 (52.43%), Query Frame = 2
Query:  446 VTMGLVLLLLAAGFDSAEAVLPTGELRLA-DGSTAYAAPAWFGLQLPEEKEATYLPLRVPKSDA-DGCGK--VTVEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAATDKYDYECGNGEGWVKDLQTPVW-DPLNT--DEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQAL-----LEAGEVDVEIFNRPRSYINLSSFLLWGLGVATV-VWASVKSGDDLRRRSNSKSGDGSSGVVNYG-----GDSHEESPS----------------------------------------------------------LELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNT-TSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATG---GEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYD------LSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSLST 2224
            +T   + ++L + F S  +++PTGEL++    +  Y AP  FG  L +E E +Y  L +   D  DGC    V++++       F LLV RGNC F  KA+AA+  GA G+++ NS+EG+YQD S A D  DY+C  G G+V  LQ P++ D ++     +C     CDSG CV+TNVTD+  G KVCCAWD+YI+M +S+ +     +IP+V++ M D   L     L  G ++V +F+RP   +++SS LLW + V TV V AS  + +D  ++ NSK  D S+   ++         HE S S                                                           ++   H + F+  +S  L+LL+F +L   V +M+  +A+ A + +  +PL ++ +   +      +  D  +   +          A+   S+ +A+ W I      ++ WV+Q+  G  +C  FL TIR+P+++VAT LL LAFLYD+F+VF+SP +F  S+M+KV +G   G IT D  FCEKYPT+  CQ  SLPMLL +P    Y     MLGLGDIV+PGLLL ++ RYD      L+  L   KGYF   + GY VGLL+AN AV+    GQPAL Y+VP TLG  LF S+   TLR +W   P + T
Sbjct:    3 ITFNFLTIILLSIFISIYSIIPTGELKIRRTDNIIYVAPGSFGTSLEKESETSYKRLLLVNGDTHDGCENPSVSIKNIQS----FYLLVSRGNCSFVDKAIAAESIGAVGVIIYNSLEGIYQDRSYALDT-DYDCDKGSGYVTSLQYPIYSDEMDALMPTSCTGASTCDSGKCVLTNVTDSN-GYKVCCAWDLYISMGNSEYDDVVSPNIPAVFIRMTDADTLISNNDLSKGTLEVALFSRPSYALDVSSILLWLMAVLTVAVGASRAAEEDKNQQYNSKYSDHSNSYQHHNELIDDNTLHETSQSNINYEIECTRXXXXXXXXXXXXXXXXXNSNPIHSQTKESKKLNNSKFDMYLDEVNDETFDISPSHAVGFIFISSSFLVLLYFIDLYSIVVIMYLFAATLACTVVYFIPLFKYIQIKCMALHNPINSSDIMSTQLH-----DWYNYAAVACSILVAVTWYIANYYGETWIWVVQDFMGIAVCLIFLDTIRIPNLQVATVLLGLAFLYDVFFVFISPLIFSSSIMLKVVSGNNTGSIT-DENFCEKYPTNKACQSTSLPMLLLMPTFSSYLSSESMLGLGDIVLPGLLLVWSARYDMRRYGTLNSDLS-SKGYFPMTLFGYGVGLLLANFAVFFFESGQPALFYIVPLTLGPILFRSFKSETLRELWIKLPPMKT 668          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: PA (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E134_BRELC)

HSP 1 Score: 346 bits (887), Expect = 3.980e-105
Identity = 247/659 (37.48%), Postives = 334/659 (50.68%), Query Frame = 2
Query:  461 VLLLLAAGFDSAEAVLPTG-------------ELRLADGSTAYAAPAWFGLQLPEEKEATYLPL-RVPKSDADGCGKVTVEDPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQD-----------------------NSAATDK--YDYECGNGEGWVKDLQTPVWDPLNTDEACWSNDA-CDSGVCVVTNVT---DATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEA-----GEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSN--------SKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPT------FCEKYPTSDGC-QVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSVGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGPPSL-STEHSGYDG 2245
            +LLLL     S  AVLPTG              L LA    + +A A +G+ LP   ++ +  L + P S+ DGC     +       G V+LV+RGNC F  KA AAQ AGA GL+V  +   VY+                        N A  +K  ++Y+C  G  +V +L  PVW   NTD    S D  C S  CV+T  T    ++   +VCC WD ++ M + +     K+ IP VYVT+ DGQ L  A       +    + R R  I++SS LLW LGVAT + A+  S  DLR R+          + GD     + YG D        EL  RH + F+  A  +L+ L++  +G  + ++F +S +   + +V  PLM W   ++           G      CLG L  + +A           W + R T    WVLQ+L G  LC  FL T++LP++KVAT LL LAF YD+F+VFLSP  FG SVMV VA+GG      +      +CE+YPT   C   E +PMLL +PR+ ++ GG  MLGLGDI++PG+L SFA RYD + G    K YF  M  GYAVGL +AN+AV + SMGQPAL+Y+VP TLG  +  S  +G  R MW G     ST  S YDG
Sbjct:    5 MLLLLVLALPSVVAVLPTGVLSLQILQESPQKPLELAKQLCSPSAIAGWGMPLPARSDSQWKTLVQSPASNYDGCAPYHFQPEKFSARGSVVLVDRGNCSFVTKAFAAQAAGAIGLIVRGTKRAVYEAIMSNRTTNSSTYLIKHDAEFNGINVAVENKPVFEYDCSKGVAFVDELAIPVW---NTDAKKCSEDVRCSSRSCVLTGHTMMQGSSTKHQVCCMWDTFVIMGAMNETGVAKLAIPVVYVTINDGQELQNAIVKYPTSLVARTYQRERPLIDVSSILLWALGVATALGATYYSTRDLRHRNEWDAAFRDQKERGDQDQVSLTYGRDD-----VYELNARHAVGFMALAGVVLIGLYYAKIGGVIPVLFAVSGAVTLAQVVGTPLMEWLVPSIASRELPIPLSGGTASVSECLGFLPSIAVAVV---------WYLHRRTY---WVLQDLMGISLCFLFLRTVQLPNLKVATVLLTLAFAYDVFFVFLSPIFFGSSVMVDVASGGPAAYTKSGYPGVDYCERYPTYSACVDPEPMPMLLVMPRIMNWAGGVSMLGLGDIIMPGMLHSFAQRYDYARG--GTKNYFRMMAIGYAVGLALANLAVMITSMGQPALMYIVPSTLGPLIIASKRNGDFRAMWSGAVGFESTTRSSYDG 641          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: PA (domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXF2_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.210e-100
Identity = 212/539 (39.33%), Postives = 301/539 (55.84%), Query Frame = 2
Query:  686 FVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSAAT-DKYD----YECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRS-------NSKSGDGSSGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGG---EITQDPTFCEKYP--TSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLSV--------------GLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGP 2209
            F+LLV+RGNC F  KAL AQ+ GA GL++ ++VE +Y  +      KYD    ++C  G+  +  L  P W  LN   AC S   C SG C+ T       G +VCC WD  +  Y    E +DKV IP V +   D   L  +    V ++ R    ++ +  L+W + +AT+  A    G  L R+        ++ SG   + V         E P+L++  +H + F+VF S  LLLLF+ N+ + V +MFC  AS+A   I++ PL+  +   L    F WS+   G V       +S  +I S   S GL L+W+  R+  +Y+W+LQ++FG C+C  FL TIRLP+IKVAT LL L FLYDIF+VFLSP +FG SVM+  A GG   + T   ++C +YP  T+  C  E++P+L+ LP++ ++ GG  MLGLGDIV+PGLLL F  RYD +                 P   G FV+M  GYAVGL +AN+ V +M  GQPALLYLVPCTLG+   +++  G ++ +W GP
Sbjct:  107 FILLVDRGNCTFTQKALIAQQLGAVGLIITDTVEAIYNASVRVNGSKYDKKGAFDCDQGQATLSSLALPPWSDLNDAAACSSASTCTSGRCIPTGS-----GNQVCCMWD--VADYMGYGEDADKVTIPVVRIRAVDASKLQVSS---VSLYKRFVPKVDAAQVLIWLIAIATIT-ACGYLGSALERKKATVKRVHSNPSGQVPATVHAQLQQEMVEEPALDINWKHAVGFLVFGSAFLLLLFYVNVVMIVIVMFCFGASSAVGTILISPLLH-SFQPLKKQLFDWSNNYLGAV------YVSIADILSFAISAGLVLFWVFTRHE-NYSWILQDVFGVCVCILFLQTIRLPNIKVATILLILVFLYDIFFVFLSPYVFGRSVMIVAAQGGKQDDSTAPSSYCLRYPQDTAAKCIKEAIPILIRLPKITNWLGGEAMLGLGDIVLPGLLLVFCARYDYATRGNVLGAPIRATASAYPGKLGLFVYMCIGYAVGLFLANLGVILMQSGQPALLYLVPCTLGVLSIMTWRAGLIKKLWDGP 626          
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Match: Signal (peptide peptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABT1_9STRA)

HSP 1 Score: 329 bits (843), Expect = 1.460e-99
Identity = 219/572 (38.29%), Postives = 315/572 (55.07%), Query Frame = 2
Query:  686 FVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQD----NSAATDKYD-YECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVTDATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEVDVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRS---NSKSGDGSSG---VVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLMFCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLG--VLSGLEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPT-----FCEKYP--TSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLS-----VGLPWGK----------GYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFLFLSYNDGTLRMMWGGP------PSLSTEHSGY---DGLSSSDGNL 2269
            F L++ERG C F  KAL AQ  GA  ++V +SVE +Y      N+   DK D ++C  G+  +  L +P W   N+  +C S   C S  C+ T       G +VCC WD  +  Y         V IP V +   D   L  +GE  + ++ R    ++L+  L+W + V T++ +        R+++   ++ +G  S+    VV       EE P++++  +H + F+VF S  LLLLF+ N+ + V +M+C  A  A SA+ + PLM   +A       LW      T +   LG   +S  +I S++ S+ L LWW++ R++ ++AWVLQ++FG C+C  FL TIRLP+IKVAT LL L FLYDIF+VF+SP +FG+SVM+  A GG+  QDP      +C +YP  T+ GC  E +P+LL  P++ ++ GG  MLGLGDIV+PGLLL F  RYD +     +G P  K          G F FM  GYA+GL +AN+ V +M  GQPALLYLVPCTLG+   LS+  G L  +W GP      P +  E   Y   D   +S GN+
Sbjct:   28 FALMIERGICNFTVKALTAQTLGASAVIVADSVETIYNSTVKVNATKFDKMDAFDCSQGQTTLSTLASPPWSDANSPSSCSSQ--CQSKRCIPTGE-----GNQVCCMWD--VADYMGAAANYFLVTIPVVRIRALDASKLT-SGEA-ISLYKRHIPRVDLAQGLIWAMAVVTIIVSGYLGAAFERKKAIVRSAPTGTASAATATVVAQLRQEQEEEPTMDINWKHAVGFLVFGSAFLLLLFYVNVVMIVIVMYCFGAFNAVSAVFLSPLMDRVKALRRP---LW------TFETRMLGDIAISTTDILSSLISLALVLWWVLTRHS-NHAWVLQDVFGVCVCILFLQTIRLPNIKVATVLLILVFLYDIFFVFISPYIFGKSVMIVAAQGGK--QDPNTAPAAYCLRYPLDTTYGCVKEEIPILLRFPKITNWIGGQAMLGLGDIVLPGLLLVFTARYDYATRGNVIGAPTKKATAAAYPGRFGLFGFMCIGYAIGLFLANLGVILMQSGQPALLYLVPCTLGVLCILSWRHGILHNLWKGPSEFNHLPPVEAEDHNYTKQDNTPASTGNV 576          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig982.17909.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative0.000e+098.35growth-on protein GRO10 n=2 Tax=Ectocarpus TaxID=2... [more]
Putative1.290e-17548.28growth-on protein GRO10 n=1 Tax=Tribonema minus Ta... [more]
Hypothetical4.830e-14443.65protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Signal8.280e-14144.92peptide peptidase-aspartyl protease family n=2 Tax... [more]
Hypothetical6.910e-12542.47protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical3.770e-11742.21protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.730e-10535.79protein n=1 Tax=Chromulina nebulosa TaxID=96789 Re... [more]
PA3.980e-10537.48domain-containing protein n=1 Tax=Bremia lactucae ... [more]
PA1.210e-10039.33domain-containing protein n=2 Tax=Aphanomyces eute... [more]
Signal1.460e-9938.29peptide peptidase n=1 Tax=Thraustotheca clavata Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig982contigEcto-sp9_F_contig982:18566..27600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1308.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G2W6
KEGG koko:K09596,ko:K09597,ko:K09598
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGsKOG2442@2759,KOG2443@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPeptidase A22B, signal peptide peptidase
Ec32 orthologEc-09_004650.1
Exons11
Model size2362
Cds size2001
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig982.17909.1prot_Ecto-sp9_F_contig982.17909.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig982 18927..27600 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931075.9733298-UTR-Ecto-sp9_F_contig982:18565..189261622931075.9733298-UTR-Ecto-sp9_F_contig982:18565..18926Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig982 18566..18926 +
1692279021.584315-UTR-Ecto-sp9_F_contig982:18565..189261692279021.584315-UTR-Ecto-sp9_F_contig982:18565..18926Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig982 18566..18926 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931075.9978168-CDS-Ecto-sp9_F_contig982:18926..193641622931075.9978168-CDS-Ecto-sp9_F_contig982:18926..19364Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 18927..19364 +
1692279021.6015236-CDS-Ecto-sp9_F_contig982:18926..193641692279021.6015236-CDS-Ecto-sp9_F_contig982:18926..19364Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 18927..19364 +
1622931076.018753-CDS-Ecto-sp9_F_contig982:20568..207511622931076.018753-CDS-Ecto-sp9_F_contig982:20568..20751Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 20569..20751 +
1692279021.6145027-CDS-Ecto-sp9_F_contig982:20568..207511692279021.6145027-CDS-Ecto-sp9_F_contig982:20568..20751Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 20569..20751 +
1622931076.0419495-CDS-Ecto-sp9_F_contig982:21477..216151622931076.0419495-CDS-Ecto-sp9_F_contig982:21477..21615Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 21478..21615 +
1692279021.624562-CDS-Ecto-sp9_F_contig982:21477..216151692279021.624562-CDS-Ecto-sp9_F_contig982:21477..21615Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 21478..21615 +
1622931076.0662644-CDS-Ecto-sp9_F_contig982:21925..221111622931076.0662644-CDS-Ecto-sp9_F_contig982:21925..22111Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 21926..22111 +
1692279021.6338232-CDS-Ecto-sp9_F_contig982:21925..221111692279021.6338232-CDS-Ecto-sp9_F_contig982:21925..22111Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 21926..22111 +
1622931076.094634-CDS-Ecto-sp9_F_contig982:22713..229181622931076.094634-CDS-Ecto-sp9_F_contig982:22713..22918Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 22714..22918 +
1692279021.6467094-CDS-Ecto-sp9_F_contig982:22713..229181692279021.6467094-CDS-Ecto-sp9_F_contig982:22713..22918Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 22714..22918 +
1622931076.1266885-CDS-Ecto-sp9_F_contig982:23468..236081622931076.1266885-CDS-Ecto-sp9_F_contig982:23468..23608Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 23469..23608 +
1692279021.6553135-CDS-Ecto-sp9_F_contig982:23468..236081692279021.6553135-CDS-Ecto-sp9_F_contig982:23468..23608Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 23469..23608 +
1622931076.1493304-CDS-Ecto-sp9_F_contig982:24082..241451622931076.1493304-CDS-Ecto-sp9_F_contig982:24082..24145Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 24083..24145 +
1692279021.6638517-CDS-Ecto-sp9_F_contig982:24082..241451692279021.6638517-CDS-Ecto-sp9_F_contig982:24082..24145Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 24083..24145 +
1622931076.171718-CDS-Ecto-sp9_F_contig982:24812..249771622931076.171718-CDS-Ecto-sp9_F_contig982:24812..24977Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 24813..24977 +
1692279021.672775-CDS-Ecto-sp9_F_contig982:24812..249771692279021.672775-CDS-Ecto-sp9_F_contig982:24812..24977Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 24813..24977 +
1622931076.2057536-CDS-Ecto-sp9_F_contig982:25678..258101622931076.2057536-CDS-Ecto-sp9_F_contig982:25678..25810Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 25679..25810 +
1692279021.6818242-CDS-Ecto-sp9_F_contig982:25678..258101692279021.6818242-CDS-Ecto-sp9_F_contig982:25678..25810Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 25679..25810 +
1622931076.2275488-CDS-Ecto-sp9_F_contig982:26880..269851622931076.2275488-CDS-Ecto-sp9_F_contig982:26880..26985Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 26881..26985 +
1692279021.6913643-CDS-Ecto-sp9_F_contig982:26880..269851692279021.6913643-CDS-Ecto-sp9_F_contig982:26880..26985Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 26881..26985 +
1622931076.245801-CDS-Ecto-sp9_F_contig982:27354..276001622931076.245801-CDS-Ecto-sp9_F_contig982:27354..27600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 27355..27600 +
1692279021.7057352-CDS-Ecto-sp9_F_contig982:27354..276001692279021.7057352-CDS-Ecto-sp9_F_contig982:27354..27600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig982 27355..27600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig982.17909.1

>prot_Ecto-sp9_F_contig982.17909.1 ID=prot_Ecto-sp9_F_contig982.17909.1|Name=mRNA_Ecto-sp9_F_contig982.17909.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=667bp
MGLLMLPPSSRRGSGGLSASSVTPRTLAVTMGLVLLLLAAGFDSAEAVLP
TGELRLADGSTAYAAPAWFGLQLPEEKEATYLPLRVPKSDADGCGKVTVE
DPPEGGGGFVLLVERGNCFFDAKALAAQEAGAEGLVVMNSVEGVYQDNSA
ATDKYDYECGNGEGWVKDLQTPVWDPLNTDEACWSNDACDSGVCVVTNVT
DATLGTKVCCAWDMYITMYSSDPETSDKVDIPSVYVTMKDGQALLEAGEV
DVEIFNRPRSYINLSSFLLWGLGVATVVWASVKSGDDLRRRSNSKSGDGS
SGVVNYGGDSHEESPSLELGVRHTLAFVVFASGMLLLLFFFNLGLAVTLM
FCLSASTATSAIVVLPLMRWARATLVDYGFLWSDGDGGTVDCYCLGVLSG
LEIASTITSMGLALWWLIVRNTTSYAWVLQNLFGCCLCATFLSTIRLPSI
KVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYP
TSDGCQVESLPMLLELPRLWDYTGGYVMLGLGDIVIPGLLLSFAHRYDLS
VGLPWGKGYFVFMVAGYAVGLLMANMAVYVMSMGQPALLYLVPCTLGLFL
FLSYNDGTLRMMWGGPPSLSTEHSGYDGLSSSDGNLDRGAKPGQGMGDER
QHQRWMGGGGGGGLPDS
back to top

mRNA from alignment at Ecto-sp9_F_contig982:18566..27600+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig982.17909.1 ID=mRNA_Ecto-sp9_F_contig982.17909.1|Name=mRNA_Ecto-sp9_F_contig982.17909.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9035bp|location=Sequence derived from alignment at Ecto-sp9_F_contig982:18566..27600+ (Ectocarpus species9 EcSCA_722f female)
GCATGCACGTGCGACACCACCCTTCACCAACTACTCCAGACCTCACAGCC CAGGACAGACCACGGAGCGTGGACGGTAGAGCCAGCGTGGCAGATCTTGG GAGCTTGGGGATTCGTTGTCGTAGTCACCGCGCACGCCGGCCTCGCCTGT GGCCGCCCTCAGGCAGCCCGCCCCATCACATTCTTTCCCGGAACTCTCCC CATCTTTTCGGCGGCGAAACCGCACAACACGGCCACTTTCTTCTACTCCA GCACTCCGGCACTGCCCTGACCTCTGCCGCTGCTAGCACCACTCCAAGAG CCCAGCGGGGGGTCAAACCACGCGGTGGTTTCACTAGTATTCAGGCCGGC CTCCTAGCCATATGGGACTGCTGATGTTGCCGCCCTCCTCACGGCGAGGT AGCGGCGGGTTGTCTGCTAGTAGCGTGACACCGCGGACCTTGGCTGTCAC CATGGGTCTTGTCCTCCTCCTCCTAGCAGCAGGCTTCGACTCAGCGGAGG CCGTCCTCCCCACGGGGGAGCTCCGACTCGCGGACGGGAGCACGGCCTAC GCGGCCCCGGCGTGGTTCGGCCTCCAGCTCCCGGAGGAGAAAGAGGCGAC GTATCTCCCGCTCCGGGTTCCCAAGAGCGACGCCGACGGGTGCGGGAAGG TGACGGTGGAGGATCCACCCGAGGGCGGGGGCGGGTTCGTGCTTCTGGTG GAGAGGGGCAACTGCTTCTTCGACGCCAAGGCGCTCGCGGCGCAGGAGGC CGGTGCCGAGGGGCTCGTGGTCATGAACTCGGTGGAAGGCGTCTACCAGG TGAGGCAAGGCAAGGTTGGATGTACGCTGTACGCGGCGGTTGTGTACTAC TGCTGTACACTCGCAAAGAGGGCTTTGTCTGATTGGGCAACACATGATGA ATTGAACCTACAACAATACCTGCACTTTCGGATCAACTTGTTTGGTTGTG TTCTGCTCTCTATGGGTCGAAGATGTGGCGTGCCGGGCGAAGGGGCATCC CGACGGCATTCAGAAACACAGCAGCAGTAGCGGTAGTAGTAGCAGTAGCG GTGTAGTAGCAGTAGCGGTGTTCCGTGCGCAGAACCGGAAGGAGCGTGTG CAAAATCTTAACCCTTTTGGCACTGCCTCAAGGTGTTCAGCGAGAGGTGG GCTGCAGCAAGCTGCTGTGTATTTCTATTATAGTGGAGGTTGCTCATCTG TAGCGGAGAAACACGTCCAAATTTTTAGTCGGGACAGATTTAACTTGGCG TTCGCCGACCAGCTGTCTCTATTTAACTTGGCGCCTTGTCTTCGTACAAG AGGTTTTAGCAATTGCACCGCTTTCGGGGCGCCGAATTCGAACCGACACC CACGCGCAGCCGGGTTTGCTGGGGCATATCCACCGCCCGTGAACAGGATA GAAGCAACCACGCCCATCGCAGGAAAGAAGCAAAAACACGCCCGTAACAA GAAAGAAGCAGCAGTCCACTCTGGTCTCTGCGTGTTTTATCAGCGAGAAG GGAGGAGAGTTTCACGTGCACGTCGAGGCAGCGCCCACGCCCAGGGATCC GTACATGTTTCTCTTTACAGATCACCTGCACGCCCGTCCTCTCGCCGGAT CGCTTCAAGTAGTGACGTGATGATGATTGCGCTGCATCTGCATTCTTCTT GCCATCTTGACTCCATCTGTCCTCCTCCTTCTGTAATGTGAAGGCACCGG CATCGGTTGTGAAGCAACCATCATCACCATCAATTCATCTTCAGACAATG GCTCGTTCGTAGCGATGAGAGACCCGCATGCTTTTAATCTGCACGCACGG TTGTTTGTTTGCTGCCGCGATGACGACACGCCTCTACAGTACCCTGGTGT TTCCTCTCCTTCGTGTATTCCCGTTCCGTCAATTCTCTTGCTTTTTCTCG CGGGTTTCCGCGTAATTGTCTCTCACCCCCTATTTGTACTTATCGTCAAC CCCCTCTGAGTACCGTCAACTGCCAACCGCCTACGTAACGATCTTGAACG CAGGACAATAGCGCGGCCACCGACAAGTATGACTACGAGTGCGGCAACGG CGAGGGTTGGGTCAAAGACCTCCAGACCCCGGTGTGGGACCCGCTCAACA CCGACGAGGCGTGCTGGTCCAACGACGCCTGTGACTCGGGAGTGTGCGTC GTAACCAACGTCACCGACGCAACCTTGGGGACAAAGGTGAATGACCGACT CGGTCATGACCAGAGAGCAAGGCAGCGCCAGCCGGCAGAGTTGATTGACT ACTAGAACTACAGAGTGTTGCGTTTCGTATGCGTTTCTGTGTAATGAAAG CGGTTCGTTTTGCGGACGGACCACCGCCGCCGCCTGCTGTGTGTGATTCT TGTCGCCTTTCCACGACGGAGCCCCCCGACCTTTTTTGTACTTTTTTATA TCCTGCTCCGCGTGCCCTTCGCCATCACCCCCACTCATGGATACCTTTTT TTGTCCTACTCCGCGTGCCCTTCGCCATCACCCCCACTCGTTGATACCTT TTTTTGTTCTACTCCGCGTGCCCTTCGCCATCACCCCCACTCGTTGATAC CTTTTTATGTCCTACTCCGCGTGCCCTTCGCCATCACCCCCACTCGTTGA TACCTTTTTATGTCCTACTCCGCGTGCCCTTCTTCATCACCCCCATTCGT TGACACCTTTTTATATCCTACTCTGGATGCCCTTCTTCATCACCCCCACT CATGGATACCTTTTGATGTCCTGCTCCGCGTGCCCTTCGCCATCACCCTC ATTCGTCGATAACTTTTTGTGCACAGATCCGCGTGGCCATTGCCAACACG TACTGTAGTCTGCACATTTTTGTGTCCTAACCTAACCCTCGTGTCCTTCG CACCCTGCACCCTGCACCCTTCGTATGCATATGCATCACATGGTACTACT GCTGTACGCTAGGTGTGCTGCGCTTGGGATATGTACATCACGATGTACAG CTCGGATCCGGAGACGTCGGACAAGGTCGACATCCCGTCCGTGTATGTGA CGATGAAGGATGGACAGGCTCTGCTGGAGGCTGGCGAGGTCGATGTCGAG GTGACTTGAAAGTACCTGAATGACTGACCCTTGTGTGTGATGGCCTTTGT TAGCTGTATGCATAGATGCGTTGGTGTGTTGGCGGAGATGGTGATGTGGA TGGTGGGGTGTTGGTGTTGATGGTGGTGTGGTGATGTTGATGATGGTATG GTGACGTTCATGATGGTATGGTGATGATGATGGTGATATGGTCATGTTAA TGGTGATGTGGTGATTTTGATTATGGTATTGTGACGTTGATGATGATACC CTATCCGTGTTTTGTTGTTGTTTGTTCCCCGTGGTTTCGTGATCCTCCTC CTTTGCACAGATCTTCAACCGCCCTCGCAGCTACATCAACCTGAGCTCTT TCCTCCTGTGGGGCTTGGGCGTGGCGACCGTGGTGTGGGCAAGCGTGAAG AGCGGCGATGATCTCCGGAGACGCTCCAACAGCAAGTCGGGGGACGGGTC GTCAGGGGTGGTTAACTACGGGGGTGACTCGCACGAAGAATCCCCGGTAC GTATGCGCACGTGCCTGTGGCTGATATTCCACAGCGGGCTCCATCCTTAC ATTGAAATCCCCGATAATGAAATTTTGAGAGGGGCGGGGGTGGGCGCGGG CGCTCACGTTTGCATGCCTTAGGTTGTTAAGACCATTGACTACATTGTGT GGGGGGAGTGCAAGGTTCCGGTTAGGTTAGCAGAAGGGGGGTGAGGAGGC AGAAGAGCTCTATTTTGGGTAGTGTTACTGGAGTGTCTGTCGACATGAAG AGCGCTGTTTGCCTTTTGGCCCACCCTTGGCCTATTTCAGCTGTAGTGGG AGCCTCTTCTCTCCTCCACCAAGAAACGGTGCGCTGCGGGAGGGGGATGC TTTTGGATGCTCATCGTTATGATAACAGGTAGGTCAGTTTGGGTCATGTT TGCAGAGTTGCGGATGAGCGGCTCTTCAACCTGCCCGAAACCGATCAAAC ACAAGTCCAAAGCTCGAGCGCGTTGGGCCTACGCCCCAACACCATCTTTT GACTTACGACCCCCGCCCGTGACTGGTCCACACCGCGGTGCCCCCATCCT CCGACGTAATATTGCATCTCTTTTTGTCTGTTGCGATGGGTTGAATAGTC CTTGGAGCTAGGAGTTCGACACACTCTGGCGTTTGTGGTGTTCGCCTCGG GGATGCTGCTGCTGCTCTTCTTTTTCAACCTGGGGCTGGCGGTGACCCTC ATGTTCTGCCTGTCGGCCTCTACAGCCACGTCTGCGATCGTAGTGCTGCC GCTCATGCGATGGGCCCGCGCAACGCTTGTGGACTACGGCTTTCTCTGGA GCGGTGAGTTGTGAAGGTTGGTGGGACGCCGAACCTCGCATGTGAATGGC GTGAGAGAGAAGCCAGCCCCCCCCCCTCCCCCCCGAAGTAAGTTAGCCCT AGCGCGGTATGTCGATAGTCGCAAAGTGATCGCTGGGCTGTGGCGCATGG TGAACAGCAGTGTAGTCTAGAGTGGTCAACAGGCTGTTGGATCCTCTCTG GGATTTTTTTAATCGTTCTCGTTGGCTGTGTGTCGCCGTTTGGTGGTGGT GGTGGTACTGCTAGCCGCCAGGTTAACGATACTATGCATGTACCCTCCTG CTCTACGGGTAGCGTATTCTGTTGGTTGTCCATGTTTGCGGTTGGTTGTT GTTTTTGGTGGTGGTAGTGGTAATGATGGTGCCGCTGCAGGGTGCAAAAC TGTTGTCGTGCTGTCGATGCTGTCGCCGCGTCTGCTGCTGACCACGATAC ATGAACTGCTGCCGATTACGACGATCACCTTTGTGGTATCCCCCACCCAA CGTGCTTTGCTCTTTTTCTCTTTCCCGCTGACTTTCTTTTGTGTCATTAC CAGACGGCGACGGTGGCACTGTCGACTGCTACTGCTTGGGTGTCTTGTCC GGACTGGAGATTGCTTCCACCATTACATCCATGGGTCTAGCGCTGTGGTG GCTAATCGTCCGAAACACAACAAGTTACGCCTGGGTGCTTCAGGTGAGTC TCGGCTTTGGCGAGCACTATTGAGATTGGGAGAGGGGGTGTACTCCTGTA AACGCTTACCGTTGTCATTGACCTCGCATCCCTACAATGCCTGGACCGAT GGGTATGCCGGGTCCAGGCTATGTTTGACAAGGATGAGCCAGAAGCTGGG GGTGGTGGACGCATGGTGAATTTCTTAGCTCTCAGCATGTGTGGCGTTGT TGGAGGGAAGTTGGTGCGTCCGTTTCTCGTGGTGGGTGGTCCATTCGTGT CGTTCTCAGAATCGGCTTGTCTTCGTTTGCGCCCTTTGGACTAGGGACTA TCTTAGTGATCGCCAGGGCCATGAGAGGACGCGCTGTTGCCGATGCACGA CCGCCAGCGTGCCACCAACACAGCGTGTTGCGTCCCGATGCTTGTTCGTT CGTCCCGATGCCCCCCATGCTGATGCTGTTCCTGTGCTTTGTGATTGTGT TGTTGTGTTTGTTGCAGAACCTGTTCGGGTGTTGCCTGTGCGCCACCTTC CTCTCCACCATCCGTCTTCCAAGCATCAAGGTACTACTGCATGGGAAAGT TTTTGACATTGATCATTGCTGTTCTTCAGAACATGGAGTCGGCCTCTTAA TCTGTCCAGTTCTTTTTGACCCCAGAGACGCGATCCGTATTCCAAGCATC AAGGCCTTGTATGGTTGTCTAAATTTGACATGAATGTTGTCTTTTGTTAT TTCAAAACAAGGGGTGACCTCTTATATGTCCAGTTCTCTTTGACCCCAGA GACACGATCCGTCTTCCAAGCATCAAGGTATTGTAATGTCTAAAGTTGAC GATTGATTGCTGCTGCCTATTTAGTTCAAAACAAGGAGTCGACCTCTTAT CTGTCCAGTTCTTCCTGACCCCAAAGATACTAAGGTGAAGTTACCCGGCT CAATCAGCCATCTGATAAAAAGCTAATCACGACAACAGCATTCCATCGAA ATAAGTACTGCTGTAGCCTGTAGGCTATAGGTTCAATAATGGATACATGT TGGGATTTGTGATGCAGACTATGCTTGATTCAAGAATGCCGTGGGTCCTA CATCGCATCCTGCCATGATTTCTCTTGTCTATGCATACCTCGGGACAGAT GCACCCTCCGACGTAACACACCGCGGTGGTGAGCCATGAGTACAATACAT CCTTATCCTTGACCCCCCCCCCGTCGCCTCTCTACCTCCTCGAACAGGTG GCCACCTTCCTGCTTTGCCTAGCTTTCTTGTACGACATATTCTGGGTGTT TTTGTCCCCCCAGCTGTTCGGCGAGAGCGTGATGGTCAAGGTGGCCACCG GCGGGGAGATCACCCAAGACCCCACGTTCTGCGAGAAGTATCCTACTTCC GACGGGTGCCAGGTGGGTGCCTGTTGCGTTACACATACGATACCATACCG TCTCCCTTTGTAGCGTTGAATTTCATTTGGCGTTGGTGACCGGAAGAAGT AGTATTAGCGATCGTACGCACCACGGTAGTGATCTATTGTCAGGCATCGT GGACATCTTTTTTTTTGTGCTGGTGTGTTGGACCAATACGGATATTGGGC GGATACCGGAACGACTTATTTTGTGAAAAAGACAACAACAACAACGATGT GTCTACATGTGCTTGAATGCATCGTGTGGATGCATGTCGCATACGTTGCG TCCGCGGTTTGGCACCTGCTCATTTTTTCCTCTCGGTGGATCGATTGCGC TTTACTCGCAACTTTCCTTGCTCCCCGAACAGCGCAGTAGTCAGATGAGG CGTGGACGCGTATCATCGTGAGTCCATCTATGACAACCTCGGTTGAGCTG AAATTAGGTGCCATCTTTTTTGTTTTGTTTTGATTTTTTTTTTCCAGGTG GAAAGCCTCCCCCCGGTACTGGAATTTTGTGGGACTATCAATGACCGCGG TTGAGCTGAAGGTTGTACGATGTGATCAATTTCAACCCTTTCTTGTCTTC CAGGTGGAATCCTCCCCACGTGGCTGAAGTCCTCCGCTTGTGGGACTAAT ATTGGGCGTGGTCGAGCTGCAGCGATTAATATCAACTTTCATTGTTTTGA TTTTTTGTTCCAGGTGGAAAGCCTCCCGATGTTGCTGGAACTCCCCCGGC TGTGGGACTACACCGGAGGTTACGTGATGCTTGGCCTGGGCGACATCGTC ATCCCTGGCCTGCTGCTGTCCTTCGCCCACCGCTACGACCTTTCTGTAAG ACAAGATAAGAGATGTACATAGTCTCAGTGCCGTAGGTGACCTGACATAA GATACCACACACCCTGGACCGATTTCCTTTATTACCGTGGGTTTCCTGTA CCATAATGGTATTACCATACCACAAGGGTATTGCCGTAGGTGACCTGACA TAAGATACCACACACCCTGGACCGATTTCCTTTATTACCGCGGGTTTCCT GTACCATAATGGTATTACCATACCACAAGGGTATTGCCGTAGGTGACCTG ACATAAGATACCACACACCCTGGACCGATTTCCTTTATTACCGCGGGGTT CCTGTACCATAATGGTATTACCATACCACAAGGGTATTGCCGTAGGTGAC CTGACATAAGATACCACACACCCTGGACCGATTTCCTTTATTTCCACGGG TTTCCTGCACCATAATGGTATTACCATACCACAAGGGTATTGCCGTAGGT GACCTGACACAAGACACCACACGCCCTGGACCGATTTCCTTTATTTCCAC GGGTTTCCTGAACCATAATGGTATCACCATACCATAATGGTATTACCATA CCATAATGGTATTACCATACCATAATGGTATTGCCGTAGGTGACCTCACG TAAGAAAGCACACACCCTGGACCAATCTTCAAAGCCCGGTTACTCTGCAG CACACTATAACACCGAAGGTGCCGAAAACGGCGTCGTCGGAGTGGTCTCG TCCAGAGCTTTCCGACAACGTACCATTTGATGTTGGCATTCACGTCGCCG CGGAGCAATCGAGCTTTGGAAAATCGGTCCAGGGGGTGCGATGTCTCATG CAACCTACCGTACAACCTTTGCTGAGTTGTTGGTGGAAATGTTGGTGCTG GTTTTAGACCGTGAGCATGGCTTTCAACAACGCCTCCTCCGCTCTCTTCT TTAGATGGGTAGTTCTCGCGGTACACAGAGTATTACCCTGCCGTTCAACA GCCCTCTTCGGCATCCTCTGCACAACAACCCCGCCTCCCGGCGTCTCCGG GCCATGGTCATGTCCATGTCTTCACGTCTGTTTATGTTTTGTGTTTGGCG CTTTGGTGCTTTCAGGTGGGACTTCCCTGGGGCAAGGGATACTTTGTCTT CATGGTCGCCGGCTACGCGGTGGGGCTGCTGATGGCCAACATGGCCGTCT ATGTAATGTCAATGGGACAGGTAAGAAGAAAAGAAAATTGTTCGAGGCAA AAGCCTATAATACGACTACGACGTAGAAACGGGACCTTTGCTATCTCTGC AATTGTTTTGTGCTGGGTGCAAAACCAGCTGCCGGGAGAGAGCTGTCAAC AACGCGGCCCCGTCGCTCACGAGCCAACCTTATCCCCGCCCCCCCCCCCC GAACGCTCAGCATCCACCCCGCCCACATTTTACAGTACCAAGCTAGCAGC CCTAATCTACACCTTCAGGACGCGTTCCTACATGCAGGAACTCTTCGAAG CTAAGATATACCCCCCGTCTCCCGTCCCCCGTCTAAGATATACCCCACCC CCCCGCCCCCGCCCTGTCTTAATTTCGCGTGTCCCCCAGCCGGCGCTCCT GTACCTAGTCCCGTGTACCCTTGGGCTCTTCCTGTTCCTGTCGTATAACG ACGGCACTCTGCGCATGATGTGGGGCGGGCCCCCTTCTCTCAGCACGGAG CACTCGGGCTACGACGGGCTATCGAGCAGTGACGGTAACTTAGACAGGGG CGCCAAGCCTGGGCAGGGGATGGGGGACGAGCGACAACATCAGCGGTGGA TGGGGGGCGGGGGCGGGGGGGGGCTGCCCGACTCG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig982:18566..27600+

>mRNA_Ecto-sp9_F_contig982.17909.1 ID=mRNA_Ecto-sp9_F_contig982.17909.1|Name=mRNA_Ecto-sp9_F_contig982.17909.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4002bp|location=Sequence derived from alignment at Ecto-sp9_F_contig982:18566..27600+ (Ectocarpus species9 EcSCA_722f female)
ATGGGACTGCTGATGTTGCCGCCCTCCTCACGGCGAGGTAGCGGCGGGTT
GTCTGCTAGTAGCGTGACACCGCGGACCTTGGCTGTCACCATGGGTCTTG
TCCTCCTCCTCCTAGCAGCAGGCTTCGACTCAGCGGAGGCCGTCCTCCCC
ACGGGGGAGCTCCGACTCGCGGACGGGAGCACGGCCTACGCGGCCCCGGC
GTGGTTCGGCCTCCAGCTCCCGGAGGAGAAAGAGGCGACGTATCTCCCGC
TCCGGGTTCCCAAGAGCGACGCCGACGGGTGCGGGAAGGTGACGGTGGAG
GATCCACCCGAGGGCGGGGGCGGGTTCGTGCTTCTGGTGGAGAGGGGCAA
CTGCTTCTTCGACGCCAAGGCGCTCGCGGCGCAGGAGGCCGGTGCCGAGG
GGCTCGTGGTCATGAACTCGGTGGAAGGCGTCTACCAGATGGGACTGCTG
ATGTTGCCGCCCTCCTCACGGCGAGGTAGCGGCGGGTTGTCTGCTAGTAG
CGTGACACCGCGGACCTTGGCTGTCACCATGGGTCTTGTCCTCCTCCTCC
TAGCAGCAGGCTTCGACTCAGCGGAGGCCGTCCTCCCCACGGGGGAGCTC
CGACTCGCGGACGGGAGCACGGCCTACGCGGCCCCGGCGTGGTTCGGCCT
CCAGCTCCCGGAGGAGAAAGAGGCGACGTATCTCCCGCTCCGGGTTCCCA
AGAGCGACGCCGACGGGTGCGGGAAGGTGACGGTGGAGGATCCACCCGAG
GGCGGGGGCGGGTTCGTGCTTCTGGTGGAGAGGGGCAACTGCTTCTTCGA
CGCCAAGGCGCTCGCGGCGCAGGAGGCCGGTGCCGAGGGGCTCGTGGTCA
TGAACTCGGTGGAAGGCGTCTACCAGGACAATAGCGCGGCCACCGACAAG
TATGACTACGAGTGCGGCAACGGCGAGGGTTGGGTCAAAGACCTCCAGAC
CCCGGTGTGGGACCCGCTCAACACCGACGAGGCGTGCTGGTCCAACGACG
CCTGTGACTCGGGAGTGTGCGTCGTAACCAACGTCACCGACGCAACCTTG
GGGACAAAGGACAATAGCGCGGCCACCGACAAGTATGACTACGAGTGCGG
CAACGGCGAGGGTTGGGTCAAAGACCTCCAGACCCCGGTGTGGGACCCGC
TCAACACCGACGAGGCGTGCTGGTCCAACGACGCCTGTGACTCGGGAGTG
TGCGTCGTAACCAACGTCACCGACGCAACCTTGGGGACAAAGGTGTGCTG
CGCTTGGGATATGTACATCACGATGTACAGCTCGGATCCGGAGACGTCGG
ACAAGGTCGACATCCCGTCCGTGTATGTGACGATGAAGGATGGACAGGCT
CTGCTGGAGGCTGGCGAGGTCGATGTCGAGGTGTGCTGCGCTTGGGATAT
GTACATCACGATGTACAGCTCGGATCCGGAGACGTCGGACAAGGTCGACA
TCCCGTCCGTGTATGTGACGATGAAGGATGGACAGGCTCTGCTGGAGGCT
GGCGAGGTCGATGTCGAGATCTTCAACCGCCCTCGCAGCTACATCAACCT
GAGCTCTTTCCTCCTGTGGGGCTTGGGCGTGGCGACCGTGGTGTGGGCAA
GCGTGAAGAGCGGCGATGATCTCCGGAGACGCTCCAACAGCAAGTCGGGG
GACGGGTCGTCAGGGGTGGTTAACTACGGGGGTGACTCGCACGAAGAATC
CCCGATCTTCAACCGCCCTCGCAGCTACATCAACCTGAGCTCTTTCCTCC
TGTGGGGCTTGGGCGTGGCGACCGTGGTGTGGGCAAGCGTGAAGAGCGGC
GATGATCTCCGGAGACGCTCCAACAGCAAGTCGGGGGACGGGTCGTCAGG
GGTGGTTAACTACGGGGGTGACTCGCACGAAGAATCCCCGTCCTTGGAGC
TAGGAGTTCGACACACTCTGGCGTTTGTGGTGTTCGCCTCGGGGATGCTG
CTGCTGCTCTTCTTTTTCAACCTGGGGCTGGCGGTGACCCTCATGTTCTG
CCTGTCGGCCTCTACAGCCACGTCTGCGATCGTAGTGCTGCCGCTCATGC
GATGGGCCCGCGCAACGCTTGTGGACTACGGCTTTCTCTGGAGCGTCCTT
GGAGCTAGGAGTTCGACACACTCTGGCGTTTGTGGTGTTCGCCTCGGGGA
TGCTGCTGCTGCTCTTCTTTTTCAACCTGGGGCTGGCGGTGACCCTCATG
TTCTGCCTGTCGGCCTCTACAGCCACGTCTGCGATCGTAGTGCTGCCGCT
CATGCGATGGGCCCGCGCAACGCTTGTGGACTACGGCTTTCTCTGGAGCG
ACGGCGACGGTGGCACTGTCGACTGCTACTGCTTGGGTGTCTTGTCCGGA
CTGGAGATTGCTTCCACCATTACATCCATGGGTCTAGCGCTGTGGTGGCT
AATCGTCCGAAACACAACAAGTTACGCCTGGGTGCTTCAGACGGCGACGG
TGGCACTGTCGACTGCTACTGCTTGGGTGTCTTGTCCGGACTGGAGATTG
CTTCCACCATTACATCCATGGGTCTAGCGCTGTGGTGGCTAATCGTCCGA
AACACAACAAGTTACGCCTGGGTGCTTCAGAACCTGTTCGGGTGTTGCCT
GTGCGCCACCTTCCTCTCCACCATCCGTCTTCCAAGCATCAAGAACCTGT
TCGGGTGTTGCCTGTGCGCCACCTTCCTCTCCACCATCCGTCTTCCAAGC
ATCAAGGTGGCCACCTTCCTGCTTTGCCTAGCTTTCTTGTACGACATATT
CTGGGTGTTTTTGTCCCCCCAGCTGTTCGGCGAGAGCGTGATGGTCAAGG
TGGCCACCGGCGGGGAGATCACCCAAGACCCCACGTTCTGCGAGAAGTAT
CCTACTTCCGACGGGTGCCAGGTGGCCACCTTCCTGCTTTGCCTAGCTTT
CTTGTACGACATATTCTGGGTGTTTTTGTCCCCCCAGCTGTTCGGCGAGA
GCGTGATGGTCAAGGTGGCCACCGGCGGGGAGATCACCCAAGACCCCACG
TTCTGCGAGAAGTATCCTACTTCCGACGGGTGCCAGGTGGAAAGCCTCCC
GATGTTGCTGGAACTCCCCCGGCTGTGGGACTACACCGGAGGTTACGTGA
TGCTTGGCCTGGGCGACATCGTCATCCCTGGCCTGCTGCTGTCCTTCGCC
CACCGCTACGACCTTTCTGTGGAAAGCCTCCCGATGTTGCTGGAACTCCC
CCGGCTGTGGGACTACACCGGAGGTTACGTGATGCTTGGCCTGGGCGACA
TCGTCATCCCTGGCCTGCTGCTGTCCTTCGCCCACCGCTACGACCTTTCT
GTGGGACTTCCCTGGGGCAAGGGATACTTTGTCTTCATGGTCGCCGGCTA
CGCGGTGGGGCTGCTGATGGCCAACATGGCCGTCTATGTAATGTCAATGG
GACAGGTGGGACTTCCCTGGGGCAAGGGATACTTTGTCTTCATGGTCGCC
GGCTACGCGGTGGGGCTGCTGATGGCCAACATGGCCGTCTATGTAATGTC
AATGGGACAGCCGGCGCTCCTGTACCTAGTCCCGTGTACCCTTGGGCTCT
TCCTGTTCCTGTCGTATAACGACGGCACTCTGCGCATGATGTGGGGCGGG
CCCCCTTCTCTCAGCACGGAGCACTCGGGCTACGACGGGCTATCGAGCAG
TGACGGTAACTTAGACAGGGGCGCCAAGCCTGGGCAGGGGATGGGGGACG
AGCGACAACATCAGCGGTGGATGGGGGGCGGGGGCGGGGGGGGGCTGCCC
GACTCGCCGGCGCTCCTGTACCTAGTCCCGTGTACCCTTGGGCTCTTCCT
GTTCCTGTCGTATAACGACGGCACTCTGCGCATGATGTGGGGCGGGCCCC
CTTCTCTCAGCACGGAGCACTCGGGCTACGACGGGCTATCGAGCAGTGAC
GGTAACTTAGACAGGGGCGCCAAGCCTGGGCAGGGGATGGGGGACGAGCG
ACAACATCAGCGGTGGATGGGGGGCGGGGGCGGGGGGGGGCTGCCCGACT
CG
back to top