mRNA_Ecto-sp9_F_contig974.17840.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 2.260e-142 Identity = 226/232 (97.41%), Postives = 228/232 (98.28%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASSEQPAGRGKPVVVPS 702
MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVA SGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTAL+GGWNEVACQPELFWLDALGALQDV FGAHGLASRFALSLLDNGFREGMSLDEARHLME CFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXAS EQPAGRGKPVV+PS
Sbjct: 1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXAS-EQPAGRGKPVVLPS 231
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 8.370e-130 Identity = 229/236 (97.03%), Postives = 231/236 (97.88%), Query Frame = 1
Query: 1 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASSEQPAGRGKPVVVPSVV 708
SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNA+LMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVA QPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLME CFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXX AS EQPAGRGKPVV PSV+
Sbjct: 26 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXRAS-EQPAGRGKPVV-PSVI 259
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: proteasome (subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1) HSP 1 Score: 145 bits (367), Expect = 3.000e-38 Identity = 68/200 (34.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGE 606
M +L+G+K RDFVLL D++ RS++++ + +K+ +LSD++ +A +G+ GD F +++ +N +L ++ + + + A+F R+NLAD LR + A + LLGG++ + +PEL+W+D LG+L V F AHG F++ ++D +R M+++EA L+ C +++ +R+L + F V+D +G RD++ ++ E
Sbjct: 1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRC-DLLLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVKVDE 199
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY) HSP 1 Score: 144 bits (363), Expect = 1.260e-37 Identity = 70/196 (35.71%), Postives = 126/196 (64.29%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 594
M L+G+K RDFV++ D S+++M T+ K+ LS+ +++A SG+QGD F E++ +N +L ++ + +GA+ A+F RRNLA+ LR + A V LL G+++ P+L+++D L +L +V F +HG F+L+++D + E ++ +EA +M+KC R++ +R +V+ F ++++DKDG RD+ I
Sbjct: 1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQE-GPQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU) HSP 1 Score: 143 bits (361), Expect = 2.280e-37 Identity = 72/201 (35.82%), Postives = 126/201 (62.69%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEE 609
M L+G+KG+DFV++ D+ RS+V M ++ K+ +LSD +++A SG+ GD F E++ +N +L ++ + + R A+F RRNLA+ LR + Q V L+GG++E P LF++D L AL + F AHG S F LSLLD +R+ ++ + A L+ +C ++++R++V+ F ++ ++KDG D+ + G++
Sbjct: 1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETD-GPSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLPDLRAGKQ 199
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=4 Tax=Physalacriaceae TaxID=862241 RepID=A0A284RK40_ARMOS) HSP 1 Score: 142 bits (359), Expect = 3.870e-37 Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
M L + G+ +V++ D+ RS+V M + K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+G A + RR+LA+ LR + AV LLGG++ +P L+W+D LG + +V F AHG S F LSLLD SL+E +++C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 MENLFAITGKGYVIVAADTTSARSIVKMKVDEDKIKVLSPHLLMAYSGEPGDTIQFAEYVERNIRLFQIRNTYPLGPSAAASWIRRSLAESLRSR-KPYAVNLLLGGYDTTKHEPHLYWVDYLGTMTEVPFAAHGYGSYFVLSLLDRYHNPEASLEEGLATLKRCIAEVAKRVVVSPGQYKVKVVDKDGSREV 192
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=3 Tax=Agaricales TaxID=5338 RepID=A0A4S8L3M7_DENBC) HSP 1 Score: 142 bits (358), Expect = 5.420e-37 Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
M T + G+ +V+L D+ RS+V M ++ K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+ A + RR+LAD LR + AV LLGG++ P L+W+D LG + ++ FGAHG S FALSLLD +L+E + +C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFAITGKGYVILAADTTSARSIVKMKSDEDKIKTLSPHLLMAYSGEPGDTIQFAEYIERNIRLYQIRNNYPLRPPAAASWIRRSLADSLRSR-KPYAVNLLLGGYDTTTYTPHLYWVDYLGTMTELPFGAHGYGSYFALSLLDRYHDPEATLEEGLATLRRCIDEVSKRLVVSPGKYKVKVVDKDGIREV 192
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PRE6_PHLGI) HSP 1 Score: 142 bits (358), Expect = 5.420e-37 Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
M G+ G+ +VL+ D+ SV+ + + K++EL+ ++L+A SG+ GD F E+++RN RL Q+ +S P+ + A + R+ LA LR + + +V LLGG++ P L+WLD LG L +V F AHG S FALSLLD SL+E +++C ++ +R +VS F +KVVDKDG R++
Sbjct: 1 MEVSFGITGKGYVLVAADTTAAHSVIKVKNDVDKIIELNPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNSLPLRPPSAASWVRKTLAQSLRSR-SPYSVNLLLGGYDTSDYTPHLYWLDYLGTLVEVPFAAHGYGSYFALSLLDRYHDPEASLEEGIETLKRCIAEISKRLVVSPERFKVKVVDKDGVREI 192
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: proteasome (subunit beta type-2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8910) HSP 1 Score: 142 bits (358), Expect = 6.630e-37 Identity = 69/193 (35.75%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
M L+G++G+DFVL+ D+ RS+V M +Y K+ +L+DN+L+ +G+ GD F E++ +N +L ++ + + A+F R+NLAD LR Q V LL G+++ P L+++D L +L + F AHG + F +S++D + E ++L+EA+ L+ KC ++ +R++V+ F ++ VDKDG RD+
Sbjct: 1 MECLIGIQGKDFVLVAADTVSARSIVSMKQDYDKMFKLNDNLLMLVTGESGDTVQFAEYIGKNIQLYKMRNGYELSPSAAANFTRKNLADYLRSQ-TPYMVNLLLAGYDKDE-GPSLYFMDYLASLNKLPFAAHGYGALFTMSIMDRHYYEDITLEEAKELLSKCVNEIRQRFIVNMPTFKVRCVDKDGVRDL 191
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9) HSP 1 Score: 142 bits (357), Expect = 7.600e-37 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
M T + G+ +V++ D+ RS+V M + K+ E+S ++L+A SG+ GD F E+++RN RL Q+ + P+ A + RR+LAD LR + + +V L+GG++ +P+L+W+D LG DV FGAHG S FALSLLD SL+E +++C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFALTGKGYVIVAADTTAARSIVKMKVDEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSR-SPYSVNLLVGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig974.17840.1 >prot_Ecto-sp9_F_contig974.17840.1 ID=prot_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQback to top mRNA from alignment at Ecto-sp9_F_contig974:1359..4286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig974.17840.1 ID=mRNA_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2928bp|location=Sequence derived from alignment at Ecto-sp9_F_contig974:1359..4286+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig974:1359..4286+ >mRNA_Ecto-sp9_F_contig974.17840.1 ID=mRNA_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp9_F_contig974:1359..4286+ (Ectocarpus species9 EcSCA_722f female)back to top |