mRNA_Ecto-sp9_F_contig974.17840.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig974.17840.1
Unique NamemRNA_Ecto-sp9_F_contig974.17840.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 2.260e-142
Identity = 226/232 (97.41%), Postives = 228/232 (98.28%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASSEQPAGRGKPVVVPS 702
            MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVA SGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTAL+GGWNEVACQPELFWLDALGALQDV FGAHGLASRFALSLLDNGFREGMSLDEARHLME CFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXAS EQPAGRGKPVV+PS
Sbjct:    1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXAS-EQPAGRGKPVVLPS 231          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 8.370e-130
Identity = 229/236 (97.03%), Postives = 231/236 (97.88%), Query Frame = 1
Query:    1 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASSEQPAGRGKPVVVPSVV 708
            SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNA+LMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVA QPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLME CFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXX AS EQPAGRGKPVV PSV+
Sbjct:   26 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXRAS-EQPAGRGKPVV-PSVI 259          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: proteasome (subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1)

HSP 1 Score: 145 bits (367), Expect = 3.000e-38
Identity = 68/200 (34.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGE 606
            M +L+G+K RDFVLL  D++  RS++++  + +K+ +LSD++ +A +G+ GD   F +++ +N +L ++ +   +  +  A+F R+NLAD LR + A +    LLGG++  + +PEL+W+D LG+L  V F AHG    F++ ++D  +R  M+++EA  L+  C +++ +R+L +   F   V+D +G RD++ ++  E
Sbjct:    1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRC-DLLLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVKVDE 199          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY)

HSP 1 Score: 144 bits (363), Expect = 1.260e-37
Identity = 70/196 (35.71%), Postives = 126/196 (64.29%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 594
            M  L+G+K RDFV++  D     S+++M T+  K+  LS+ +++A SG+QGD   F E++ +N +L ++ +   +GA+  A+F RRNLA+ LR + A   V  LL G+++    P+L+++D L +L +V F +HG    F+L+++D  + E ++ +EA  +M+KC R++ +R +V+   F ++++DKDG RD+  I
Sbjct:    1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQE-GPQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU)

HSP 1 Score: 143 bits (361), Expect = 2.280e-37
Identity = 72/201 (35.82%), Postives = 126/201 (62.69%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEE 609
            M  L+G+KG+DFV++  D+   RS+V M  ++ K+ +LSD +++A SG+ GD   F E++ +N +L ++ +   +  R  A+F RRNLA+ LR +   Q V  L+GG++E    P LF++D L AL +  F AHG  S F LSLLD  +R+ ++ + A  L+ +C  ++++R++V+   F ++ ++KDG  D+  +  G++
Sbjct:    1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETD-GPSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLPDLRAGKQ 199          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=4 Tax=Physalacriaceae TaxID=862241 RepID=A0A284RK40_ARMOS)

HSP 1 Score: 142 bits (359), Expect = 3.870e-37
Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
            M  L  + G+ +V++  D+   RS+V M  +  K+  LS ++L+A SG+ GD   F E+++RN RL Q+ ++ P+G    A + RR+LA+ LR +    AV  LLGG++    +P L+W+D LG + +V F AHG  S F LSLLD       SL+E    +++C  ++ +R +VS   + +KVVDKDG R+V
Sbjct:    1 MENLFAITGKGYVIVAADTTSARSIVKMKVDEDKIKVLSPHLLMAYSGEPGDTIQFAEYVERNIRLFQIRNTYPLGPSAAASWIRRSLAESLRSR-KPYAVNLLLGGYDTTKHEPHLYWVDYLGTMTEVPFAAHGYGSYFVLSLLDRYHNPEASLEEGLATLKRCIAEVAKRVVVSPGQYKVKVVDKDGSREV 192          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=3 Tax=Agaricales TaxID=5338 RepID=A0A4S8L3M7_DENBC)

HSP 1 Score: 142 bits (358), Expect = 5.420e-37
Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
            M T   + G+ +V+L  D+   RS+V M ++  K+  LS ++L+A SG+ GD   F E+++RN RL Q+ ++ P+     A + RR+LAD LR +    AV  LLGG++     P L+W+D LG + ++ FGAHG  S FALSLLD       +L+E    + +C  ++ +R +VS   + +KVVDKDG R+V
Sbjct:    1 METSFAITGKGYVILAADTTSARSIVKMKSDEDKIKTLSPHLLMAYSGEPGDTIQFAEYIERNIRLYQIRNNYPLRPPAAASWIRRSLADSLRSR-KPYAVNLLLGGYDTTTYTPHLYWVDYLGTMTELPFGAHGYGSYFALSLLDRYHDPEATLEEGLATLRRCIDEVSKRLVVSPGKYKVKVVDKDGIREV 192          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PRE6_PHLGI)

HSP 1 Score: 142 bits (358), Expect = 5.420e-37
Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
            M    G+ G+ +VL+  D+    SV+ +  +  K++EL+ ++L+A SG+ GD   F E+++RN RL Q+ +S P+   + A + R+ LA  LR + +  +V  LLGG++     P L+WLD LG L +V F AHG  S FALSLLD       SL+E    +++C  ++ +R +VS   F +KVVDKDG R++
Sbjct:    1 MEVSFGITGKGYVLVAADTTAAHSVIKVKNDVDKIIELNPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNSLPLRPPSAASWVRKTLAQSLRSR-SPYSVNLLLGGYDTSDYTPHLYWLDYLGTLVEVPFAAHGYGSYFALSLLDRYHDPEASLEEGIETLKRCIAEISKRLVVSPERFKVKVVDKDGVREI 192          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: proteasome (subunit beta type-2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8910)

HSP 1 Score: 142 bits (358), Expect = 6.630e-37
Identity = 69/193 (35.75%), Postives = 121/193 (62.69%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
            M  L+G++G+DFVL+  D+   RS+V M  +Y K+ +L+DN+L+  +G+ GD   F E++ +N +L ++ +   +     A+F R+NLAD LR Q     V  LL G+++    P L+++D L +L  + F AHG  + F +S++D  + E ++L+EA+ L+ KC  ++ +R++V+   F ++ VDKDG RD+
Sbjct:    1 MECLIGIQGKDFVLVAADTVSARSIVSMKQDYDKMFKLNDNLLMLVTGESGDTVQFAEYIGKNIQLYKMRNGYELSPSAAANFTRKNLADYLRSQ-TPYMVNLLLAGYDKDE-GPSLYFMDYLASLNKLPFAAHGYGALFTMSIMDRHYYEDITLEEAKELLSKCVNEIRQRFIVNMPTFKVRCVDKDGVRDL 191          
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Match: Proteasome (subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9)

HSP 1 Score: 142 bits (357), Expect = 7.600e-37
Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1
Query:    7 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDV 585
            M T   + G+ +V++  D+   RS+V M  +  K+ E+S ++L+A SG+ GD   F E+++RN RL Q+ +  P+     A + RR+LAD LR + +  +V  L+GG++    +P+L+W+D LG   DV FGAHG  S FALSLLD       SL+E    +++C  ++ +R +VS   + +KVVDKDG R+V
Sbjct:    1 METSFALTGKGYVIVAADTTAARSIVKMKVDEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSR-SPYSVNLLVGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig974.17840.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Proteasome2.260e-14297.41subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Protein8.370e-13097.03kinase domain-containing protein n=2 Tax=Ectocarpu... [more]
proteasome3.000e-3834.00subunit beta type-2 n=1 Tax=Galendromus occidental... [more]
Proteasome1.260e-3735.71subunit beta n=1 Tax=Photinus pyralis TaxID=7054 R... [more]
Proteasome2.280e-3735.82subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 ... [more]
Proteasome3.870e-3738.34subunit beta n=4 Tax=Physalacriaceae TaxID=862241 ... [more]
Proteasome5.420e-3738.86subunit beta n=3 Tax=Agaricales TaxID=5338 RepID=A... [more]
Proteasome5.420e-3738.34subunit beta n=1 Tax=Phlebiopsis gigantea 11061_1 ... [more]
proteasome6.630e-3735.75subunit beta type-2-like n=1 Tax=Mercenaria mercen... [more]
Proteasome7.600e-3738.86subunit beta n=4 Tax=Agaricomycetidae TaxID=452333... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig974contigEcto-sp9_F_contig974:1359..4286 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.4
Seed ortholog evalue2.9e-112
Seed eggNOG ortholog2880.D7FKH0
Preferred nameSCYL2
KEGG koko:K02734,ko:K08471,ko:K12847,ko:K16738,ko:K17541,ko:K18626
KEGG Pathwayko03040,ko03050,map03040,map03050
KEGG ModuleM00337,M00340,M00354
GOsGO:0000003,GO:0000139,GO:0000166,GO:0000502,GO:0002090,GO:0002092,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0007034,GO:0007041,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007346,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016055,GO:0016192,GO:0016301,GO:0016310,GO:0016504,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030071,GO:0030100,GO:0030111,GO:0030135,GO:0030136,GO:0030162,GO:0030163,GO:0030178,GO:0030234,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031410,GO:0031597,GO:0031623,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032588,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043112,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045807,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046907,GO:0048046,GO:0048259,GO:0048260,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060070,GO:0060255,GO:0060627,GO:0060828,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0090090,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098805,GO:0098827,GO:0140096,GO:0198738,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902531,GO:1902532,GO:1903052,GO:1903364,GO:1903432,GO:1904262,GO:1905114,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2000286,GO:2000369,GO:2000370,GO:2001252
EggNOG free text desc.receptor internalization involved in canonical Wnt signaling pathway
EggNOG OGsCOG0638@1,KOG0177@2759,KOG2137@1,KOG2137@2759
EC3.4.25.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko03036,ko03041,ko03051,ko04030,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_002115.1
Exons4
Model size1196
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig974.17840.1prot_Ecto-sp9_F_contig974.17840.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig974 1365..3810 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931064.767877-UTR-Ecto-sp9_F_contig974:1358..13641622931064.767877-UTR-Ecto-sp9_F_contig974:1358..1364Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig974 1359..1364 +
1692279016.059577-UTR-Ecto-sp9_F_contig974:1358..13641692279016.059577-UTR-Ecto-sp9_F_contig974:1358..1364Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig974 1359..1364 +
1622931064.8318481-UTR-Ecto-sp9_F_contig974:3810..42861622931064.8318481-UTR-Ecto-sp9_F_contig974:3810..4286Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig974 3811..4286 +
1692279016.1081488-UTR-Ecto-sp9_F_contig974:3810..42861692279016.1081488-UTR-Ecto-sp9_F_contig974:3810..4286Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig974 3811..4286 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931064.7800364-CDS-Ecto-sp9_F_contig974:1364..14541622931064.7800364-CDS-Ecto-sp9_F_contig974:1364..1454Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 1365..1454 +
1692279016.0728717-CDS-Ecto-sp9_F_contig974:1364..14541692279016.0728717-CDS-Ecto-sp9_F_contig974:1364..1454Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 1365..1454 +
1622931064.7926333-CDS-Ecto-sp9_F_contig974:1951..20441622931064.7926333-CDS-Ecto-sp9_F_contig974:1951..2044Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 1952..2044 +
1692279016.0813708-CDS-Ecto-sp9_F_contig974:1951..20441692279016.0813708-CDS-Ecto-sp9_F_contig974:1951..2044Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 1952..2044 +
1622931064.80755-CDS-Ecto-sp9_F_contig974:2523..26701622931064.80755-CDS-Ecto-sp9_F_contig974:2523..2670Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 2524..2670 +
1692279016.0901728-CDS-Ecto-sp9_F_contig974:2523..26701692279016.0901728-CDS-Ecto-sp9_F_contig974:2523..2670Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 2524..2670 +
1622931064.819052-CDS-Ecto-sp9_F_contig974:3426..38101622931064.819052-CDS-Ecto-sp9_F_contig974:3426..3810Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 3427..3810 +
1692279016.0992744-CDS-Ecto-sp9_F_contig974:3426..38101692279016.0992744-CDS-Ecto-sp9_F_contig974:3426..3810Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig974 3427..3810 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig974.17840.1

>prot_Ecto-sp9_F_contig974.17840.1 ID=prot_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp
MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQ
GDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQA
VTALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFR
EGMSLDEARHLMEKCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGE
EGTGGRGGRGGGGGGASSEQPAGRGKPVVVPSVVRSD*
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mRNA from alignment at Ecto-sp9_F_contig974:1359..4286+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig974.17840.1 ID=mRNA_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2928bp|location=Sequence derived from alignment at Ecto-sp9_F_contig974:1359..4286+ (Ectocarpus species9 EcSCA_722f female)
TCAGACATGAACACCTTGATGGGGGTAAAAGGTCGCGACTTCGTGCTGCT AGGGGGGGACAGCGCCTTCTTTCGGTCGGTGGTCATCATGGACACGGTAA GCTACGGTGTTCTCGAGCCCTTTCCCTTGTCGTTGAGGCCTTTGTGTTCC TCAAGGCCAAGACCGTGTTAGACTGCGCTGAAATGGCGACCGCACACATG CGCCGAAAGGCCTGTACTGTAAACCGGCGCCAGAATAGATGGGGACGAAC GCAGACACACACACACACAGCTTCTATCTCTGTGCCTTGCGATGATATGG CAGTAGGCTGACTGCCGAGACATGCATGTCACCCTCTCTGTGTTCACCCT GGTGCTCGTGATCACAAGGGTGGCTCGAGACGGCGGCTTGTAAACACCAT TCGCTATGTACCCGTTGCACCAGACGGCAACTCTCAGGTCCCGTTCAAGT GATGACTACCGGCGCCCGAATCAAAGCAACACGTGGAGCAGCGGTGACGA TGCACTGGCCGGTGATTGCCCGCAGTCAAGCAGGACAGACAGTGCTTGTC GTCTGGGCTAAACATTCATGATTTCTTTCTGCCGTGTCCCCAGGAGTATC GAAAAGTGGTGGAGCTGTCGGACAACGTGCTGGTTGCGGCGTCCGGTGAC CAGGGCGATGTTGAGATGTTCGTGGAGTGGCTCAAGGTAACAAGAATTGT GTCCCCACAACCAGCAGTCCCGCACACACGATACCAATGTGCATGTGTTC GAATTTCAGGTGATGTCATCGGCGACCCAAAGGGAAGGGGCGCGTGAAGC GACGGACCGGTCTCTTGAGCTGGCTATTGGTTAGAAGTAAAAATTTAACA GCCCCATCAGCGGTCGAATAGTCTAATTGTGGGACTCAAAGACGCTGCTG CCGTGGCTGTTCTGAGTGTTGCCACCGGTTTCAATACGAGAGTCGGCCCC AGAGAGAGGTCCTCGCTGTCGTTTTCGTGGTACATGTTCCATTCCATAGC GCTCATGGCGCGGAAGTAGTACCGGCAGTCAAAGACAACCTTTGGCTTTG GAGTTTTGACGACGACCAGTACGTGCGTCGTGTGGGCCACCTCGTTCTTG TCTTGCCCTGGCCCAACCGCGCTTGCCGAACCCCTCCCTCTTTCACTGCG CGTGCGCATCGTCAGCGAAATGCACGGCTGATGCAGCTTGAGTCCTCGCG ACCGGTGGGCGCGCGAACGTTGGCGCACTTCGCGAGGCGGAACCTAGCCG ACAAGCTGCGAAAACAGGGGGCGGGGCAGGCAGTGACTGCGCTTCTCGGC GGGTGGAACGAGGTGCGCGTGCTTGCCGAAAATGGCAAATATTTATTACT TGTAAATATACAACACAAACGCAGAAAGACTACCCGTTCGAGATATGCAC ATAACCACAGCAGTCGAAGGGGATGTGTTGAAGTCTTTGCAGTGAGCGGA GGGAAACCGGCTGGGTACTGGGCTTATTTCGAGTCTATTTAAGCCTGTAC ACTGAATATTTGTCAGTATATGCCAACAGGTGCCAATCACAAAATATATA CGGAGTATGCAGAGTCTGGTGTTTTTGATGGGCGCAGGATATTTTGTGTG TGTGTGCAGTTTCGCGGTGTGTCGTGAATGGCGGAGCACGTGAATGGCGG AGCACGTGACGTTCTGCCGCAAGCTCGCCTGCTTATATACCGACTCACAC ATTTCCATCCACTTTTTTCTTTACCCGCGCCTTTGCCTCTGATGGCGCAG CGCAAAATGCCGGCCAGACCTATAACAAACCGTATTTTCGCTACTAAGCA GCGTTCACCGATTGGACGTCTGAGCATGGCAGGACCTCGAATGCACCCAC CGCATTTGTCAGTACACGCGAATGCTCACAGCGGACAGCGTTAAAGTGTT TCGACCTTGCTTTGGTCCCCCCTACGCTGCACAGGAACTCATTTAGCTTT GTCCGATTTCTCCTTCGATCGAGCCAACAGCGTTCGATTCGTTGGTGTCA AGGCCTAGAGACAGCTTCGTGTATGGTTTACCACGTGTTCCTTGATTTTA CGCTCTCTCTGCACGCAGGTCGCGTGCCAGCCTGAGCTGTTTTGGCTGGA CGCCTTGGGTGCTCTCCAGGACGTCGCGTTCGGCGCGCACGGCCTAGCCT CGCGTTTCGCGCTGAGCCTTCTAGACAACGGCTTTCGCGAGGGCATGTCT CTCGACGAAGCGCGGCATCTCATGGAAAAGTGCTTCAGGCAGCTGGAGCG GCGATACCTCGTCAGTTCTGTGGGCTTTAGCATGAAGGTTGTGGACAAAG ATGGTTGCAGAGACGTAGCTTGTATTGAGCGAGGGGAAGAGGGGACCGGT GGAAGGGGGGGGCGAGGGGGCGGGGGCGGGGGTGCATCATCAGAGCAACC TGCTGGTAGAGGGAAACCGGTTGTTGTTCCATCAGTTGTGAGAAGCGACT GACTCAAGTTTAATTAAGTTAAGTTGCTGAGTACATACGTAGCTGCGAGC AGGTTCATGAAGCAAAGAAAGGTTGCTGTTCTTGCCGCGTTCTAAAACTA AGCAGATTCAGCGTAGGCTCATGATTCCGTGCGCAAGATCCAACGTTGAT TCGCGAATGTCGGTGATGCGCTCCTGCTTATTGCATAACGTTTGATGGTG TACCTTCATTGAAAAGTTGGCCGGATTGTCCCCTGTTAGAAGGTACTTGG TGTGTTAAACGCACCGCGATAGGGTTCCATGCGACCATGCGGATTGCTGC TGCTGTAGACAAAATATATGGGGTCTGCATATATAGAATGGATGCATTTA TGCATACCATGGGTATGTTTATTTTTAGCAACTGATATTTCGTCCTCCAA CGGATTGGATACAGCAAGCCTTTCACTCATCACACTCATGTTAACGCCTG TTAGATGGGAATGATTTGCCGTTTTTCT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig974:1359..4286+

>mRNA_Ecto-sp9_F_contig974.17840.1 ID=mRNA_Ecto-sp9_F_contig974.17840.1|Name=mRNA_Ecto-sp9_F_contig974.17840.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp9_F_contig974:1359..4286+ (Ectocarpus species9 EcSCA_722f female)
ATGAACACCTTGATGGGGGTAAAAGGTCGCGACTTCGTGCTGCTAGGGGG
GGACAGCGCCTTCTTTCGGTCGGTGGTCATCATGGACACGATGAACACCT
TGATGGGGGTAAAAGGTCGCGACTTCGTGCTGCTAGGGGGGGACAGCGCC
TTCTTTCGGTCGGTGGTCATCATGGACACGGAGTATCGAAAAGTGGTGGA
GCTGTCGGACAACGTGCTGGTTGCGGCGTCCGGTGACCAGGGCGATGTTG
AGATGTTCGTGGAGTGGCTCAAGGAGTATCGAAAAGTGGTGGAGCTGTCG
GACAACGTGCTGGTTGCGGCGTCCGGTGACCAGGGCGATGTTGAGATGTT
CGTGGAGTGGCTCAAGCGAAATGCACGGCTGATGCAGCTTGAGTCCTCGC
GACCGGTGGGCGCGCGAACGTTGGCGCACTTCGCGAGGCGGAACCTAGCC
GACAAGCTGCGAAAACAGGGGGCGGGGCAGGCAGTGACTGCGCTTCTCGG
CGGGTGGAACGAGCGAAATGCACGGCTGATGCAGCTTGAGTCCTCGCGAC
CGGTGGGCGCGCGAACGTTGGCGCACTTCGCGAGGCGGAACCTAGCCGAC
AAGCTGCGAAAACAGGGGGCGGGGCAGGCAGTGACTGCGCTTCTCGGCGG
GTGGAACGAGGTCGCGTGCCAGCCTGAGCTGTTTTGGCTGGACGCCTTGG
GTGCTCTCCAGGACGTCGCGTTCGGCGCGCACGGCCTAGCCTCGCGTTTC
GCGCTGAGCCTTCTAGACAACGGCTTTCGCGAGGGCATGTCTCTCGACGA
AGCGCGGCATCTCATGGAAAAGTGCTTCAGGCAGCTGGAGCGGCGATACC
TCGTCAGTTCTGTGGGCTTTAGCATGAAGGTTGTGGACAAAGATGGTTGC
AGAGACGTAGCTTGTATTGAGCGAGGGGAAGAGGGGACCGGTGGAAGGGG
GGGGCGAGGGGGCGGGGGCGGGGGTGCATCATCAGAGCAACCTGCTGGTA
GAGGGAAACCGGTTGTTGTTCCATCAGTTGTGAGAAGCGACTGAGTCGCG
TGCCAGCCTGAGCTGTTTTGGCTGGACGCCTTGGGTGCTCTCCAGGACGT
CGCGTTCGGCGCGCACGGCCTAGCCTCGCGTTTCGCGCTGAGCCTTCTAG
ACAACGGCTTTCGCGAGGGCATGTCTCTCGACGAAGCGCGGCATCTCATG
GAAAAGTGCTTCAGGCAGCTGGAGCGGCGATACCTCGTCAGTTCTGTGGG
CTTTAGCATGAAGGTTGTGGACAAAGATGGTTGCAGAGACGTAGCTTGTA
TTGAGCGAGGGGAAGAGGGGACCGGTGGAAGGGGGGGGCGAGGGGGCGGG
GGCGGGGGTGCATCATCAGAGCAACCTGCTGGTAGAGGGAAACCGGTTGT
TGTTCCATCAGTTGTGAGAAGCGACTGA
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