mRNA_Ecto-sp9_F_contig9711.17817.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9711.17817.1
Unique NamemRNA_Ecto-sp9_F_contig9711.17817.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV90_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 4.040e-188
Identity = 282/294 (95.92%), Postives = 287/294 (97.62%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXXXKANTTSGTPLDATTNDPKTLSVEWDFGDGDESFAEQARVAAAGLGDFDFASPVPQAAVAAAGEAWSGLGVSAAAVASPPSPGAVTPKARHG 882
            RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEG+YSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAK TD+LNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXX KA+TTSG PLDA TNDPKTLSVEWDFGDGDESF EQARV AAGLGDFDFASPVPQAAVAAAGEAWSGLG+S+AAVASPPSPGAVTPKA HG
Sbjct:  123 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGHYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKPTDTLNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXXSKADTTSGAPLDAATNDPKTLSVEWDFGDGDESFDEQARVDAAGLGDFDFASPVPQAAVAAAGEAWSGLGISSAAVASPPSPGAVTPKATHG 416
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Serine/threonine (protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ0_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 6.350e-181
Identity = 286/295 (96.95%), Postives = 289/295 (97.97%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXXXKANTTSGTPLDATTNDPKTLSVEWDFGDGDESFAEQARVAAAGLGDFDFASPVPQAAVAAAGEAWSGLGVSAAAVA-SPPSPGAVTPKARHG 882
            RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGN+SKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXX K +TTSGTPL A TNDPKTLSVEWDFGDGDESFAEQARVAAAGLGDFDFASPVPQAAVAAAGEAWSGLG+SAAAV  SPPSPGAVTPKARHG
Sbjct:   90 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNFSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASXXXXXXXXXXSKVDTTSGTPLGAATNDPKTLSVEWDFGDGDESFAEQARVAAAGLGDFDFASPVPQAAVAAAGEAWSGLGISAAAVVVSPPSPGAVTPKARHG 384
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V6_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.090e-60
Identity = 107/169 (63.31%), Postives = 131/169 (77.51%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRA---SQMMKSLFG 498
            RKIHRD+KA N+L+A DGSVR+ADFG SVQLT S+ KR+TF GSPYWMAPEVI   D YN +ADIWSLG+TAIE+  G PP S+MHPMKAVL IP N PP L  +  Y K F +F+E+C  +DP+ RPSA ELLKHPF+K AK+T+ L +L+E+RRA   S +M+ LFG
Sbjct:  124 RKIHRDIKAANVLIARDGSVRVADFGVSVQLTVSVDKRRTFVGSPYWMAPEVIAHTD-YNERADIWSLGITAIELATGLPPLSEMHPMKAVLFIPKNAPPRLPDDAAYGKKFQSFVERCLVKDPDERPSAAELLKHPFIKGAKQTNQLQELMESRRANKASSLMQDLFG 291
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Serine/threonine (kinase 24, putative n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=L8GP31_ACACA)

HSP 1 Score: 200 bits (508), Expect = 2.000e-57
Identity = 97/158 (61.39%), Postives = 122/158 (77.22%), Query Frame = 1 
Query:    4 KIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQ 477
            KIHRD+KA NIL++  GSV+LADFG + QLT  + KR TF G+P+WMAPEVI  Q  Y+SKADIWSLG+TAIEM KG PPY+D+HPM+ +  IP N PPTL  EGN++K F  F+ QC ++DPN RP+A+ELLKHPF+K AK+T SL  L+E R+  Q
Sbjct:  138 KIHRDIKAANILLSGTGSVKLADFGVAGQLTDQMTKRNTFVGTPFWMAPEVIK-QAGYDSKADIWSLGITAIEMAKGEPPYADLHPMRVLFLIPKNGPPTL--EGNFTKKFKDFVAQCLKKDPNERPTAKELLKHPFVKGAKKTGSLVDLIERRKKWQ 292
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Pkinase-domain-containing (protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VUZ2_9FUNG)

HSP 1 Score: 194 bits (492), Expect = 8.710e-57
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1 
Query:    4 KIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLE 459
            K+HRD+KA NIL+++ G V+LADFG S QLT ++ K+ TF G+P+WMAPEVI  Q  YN +ADIWSLG+TAIEM KG PPY+D+HPM+ +  IP N PPTL  EGN+SK F  F+  C Q+DP +RPSA+ELLKH F+K+AK+T  L +L+E
Sbjct:  130 KLHRDIKAANILLSATGDVKLADFGVSGQLTATMTKKNTFVGTPFWMAPEVIK-QSGYNDRADIWSLGITAIEMAKGEPPYADLHPMRVLFLIPKNNPPTL--EGNFSKAFKDFISLCLQKDPKIRPSAKELLKHRFIKSAKKTSYLTELIE 278
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Serine (threonine-kinase 25 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7R930_BRAPC)

HSP 1 Score: 197 bits (502), Expect = 2.050e-55
Identity = 97/174 (55.75%), Postives = 129/174 (74.14%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGN-YSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGLLNST 519
            +KIHRDVKA N+L++  G V+LADFG + QLT S+ K  TF G+P+WMAPEVI  QD Y+ KADIWSLG+TA E+ KG PPYSD+HPM+ +L IP NPPP L  +GN +S+ F  F+E C Q+DP+ RPSA+ELL+HPF++ AKRT  L +L+E  +  +  ++L G   LNS+
Sbjct:  134 KKIHRDVKAANVLLSEQGDVKLADFGVAKQLTQSVCKGNTFVGTPFWMAPEVIK-QDAYDFKADIWSLGITAYELAKGEPPYSDLHPMRVLLQIPKNPPPQL--QGNQFSRPFKEFIEMCLQKDPSNRPSAKELLRHPFIRKAKRTGYLTELIERHKDWKRNRALRGDQSLNSS 304
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: hypothetical (protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C8D8)

HSP 1 Score: 195 bits (495), Expect = 2.600e-55
Identity = 97/168 (57.74%), Postives = 125/168 (74.40%), Query Frame = 1 
Query:    4 KIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRASQMMKSLFGGGL 507
            KIHRD+KA NIL+A++G V+LADFG S QLT  + KR TF G+P+WMAPEVI  Q  Y+SKADIWS+G+TA+EM KG PP +D+HPM+A+  IP +P PTL  EGN+SK F  F   C  +DPNLRP+A+ELLK+ F+KAAK+T  L +L+E R+    M    GGG+
Sbjct:  127 KIHRDIKAANILLAANGDVKLADFGVSGQLTDQMTKRNTFVGTPFWMAPEVIK-QTGYDSKADIWSMGITALEMAKGEPPRADLHPMRALFLIPKDPAPTL--EGNFSKGFKEFCAMCLNKDPNLRPTAKELLKNKFIKAAKKTSCLTELIERRQKWLQMNG--GGGI 289
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9K8X4_MONFR)

HSP 1 Score: 189 bits (480), Expect = 2.910e-55
Identity = 88/153 (57.52%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLE 459
            +K+HRD+KA N+L+ ++G V+LADFG S QL+ ++ K+ TF G+P+WMAPEVI  Q  Y+ KADIWSLG+TA+E+  G PPYSD+HPMK +  IP N PP L  EGN++K F  F+E C QRDP  RPSA+ELLKHPF++ AK+T  L +L+E
Sbjct:  102 KKLHRDIKAANVLLGANGQVKLADFGVSGQLSATMTKKNTFVGTPFWMAPEVIK-QSGYDHKADIWSLGITALELANGEPPYSDIHPMKVLFLIPKNAPPKL--EGNFTKAFKEFVELCLQRDPRERPSARELLKHPFVRRAKKTSYLTELIE 251
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Serine/threonine (kinase 25a (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A723_GONPJ)

HSP 1 Score: 189 bits (480), Expect = 3.770e-55
Identity = 92/157 (58.60%), Postives = 115/157 (73.25%), Query Frame = 1 
Query:    1 RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARRA 471
            RK+HRD+KA NIL+   G VRLADFG S QLT ++ K+ TF G+PYWMAPEVI  Q  Y++KADIWSLG+TAIEM KG PPY+D HPM+ +  IP + PPTL  EGN+SK F  F+  C Q+DP  RPSA +LLKH F+K AK+T  L +L++   A
Sbjct:  117 RKLHRDIKAANILLTGSGDVRLADFGVSGQLTATMTKKNTFVGTPYWMAPEVIK-QSGYDAKADIWSLGITAIEMAKGEPPYADTHPMRVLFLIPKSEPPTL--EGNFSKAFKEFVSLCLQKDPAQRPSASDLLKHRFIKTAKKTSYLAELIDRHEA 270
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BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Match: Serine/threonine-protein (kinase svkA n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SVKA_DICDI)

HSP 1 Score: 194 bits (492), Expect = 7.330e-55
Identity = 92/155 (59.35%), Postives = 119/155 (76.77%), Query Frame = 1 
Query:    4 KIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAPEVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPPTLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNKLLEARR 468
            KIHRD+KA N+L+++ G V+LADFG S QLT  + KR TF G+P+WMAPEVI  Q  Y+SKADIWS+G+TA+EM KG PP +D+HPM+A+  IP +PPPTL  EGN+SK F  F   C  +DPN RP+A++LLKH F+KAAK+T SL  L+E R+
Sbjct:  128 KIHRDIKAANVLLSASGDVKLADFGVSGQLTDQMTKRNTFVGTPFWMAPEVIK-QTGYDSKADIWSMGITALEMAKGEPPRADLHPMRALFLIPKDPPPTL--EGNFSKGFKEFCALCLNKDPNQRPTAKDLLKHKFIKAAKKTSSLTDLIERRQ 279
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9711.17817.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein4.040e-18895.92kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Serine/threonine6.350e-18196.95protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Uncharacterized2.090e-6063.31protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Serine/threonine2.000e-5761.39kinase 24, putative n=2 Tax=Acanthamoeba castellan... [more]
Pkinase-domain-containing8.710e-5759.87protein n=3 Tax=Neocallimastigaceae TaxID=29007 Re... [more]
Serine2.050e-5555.75threonine-kinase 25 n=1 Tax=Brachionus plicatilis ... [more]
hypothetical2.600e-5557.74protein n=1 Tax=Acytostelium subglobosum LB1 TaxID... [more]
Protein2.910e-5557.52kinase domain-containing protein n=1 Tax=Monilinia... [more]
Serine/threonine3.770e-5558.60kinase 25a (Fragment) n=1 Tax=Gonapodya prolifera ... [more]
Serine/threonine-protein7.330e-5559.35kinase svkA n=1 Tax=Dictyostelium discoideum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9711contigEcto-sp9_F_contig9711:582..4164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score195.7
Seed ortholog evalue3.1e-47
Seed eggNOG ortholog36630.CADNFIAP00002392
Preferred namePAK6
KEGG koko:K08838
EggNOG free text desc.serine threonine protein kinase
EggNOG OGs20DVB@147545,38G1B@33154,3NV84@4751,3QJAV@4890,3S4R4@5042,KOG0201@1,KOG0201@2759
Ec32 ortholog descriptionSerine/threonine protein kinase
Ec32 orthologEc-20_002080.1
EC2.7.11.1
COG Functional cat.T
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9711.17817.1prot_Ecto-sp9_F_contig9711.17817.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9711 582..4164 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.7377527-CDS-Ecto-sp9_F_contig9711:581..6431622931061.7377527-CDS-Ecto-sp9_F_contig9711:581..643Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 582..643 +
1692279014.754802-CDS-Ecto-sp9_F_contig9711:581..6431692279014.754802-CDS-Ecto-sp9_F_contig9711:581..643Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 582..643 +
1622931061.7576942-CDS-Ecto-sp9_F_contig9711:1321..14321622931061.7576942-CDS-Ecto-sp9_F_contig9711:1321..1432Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 1322..1432 +
1692279014.7648332-CDS-Ecto-sp9_F_contig9711:1321..14321692279014.7648332-CDS-Ecto-sp9_F_contig9711:1321..1432Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 1322..1432 +
1622931061.7743874-CDS-Ecto-sp9_F_contig9711:1822..19191622931061.7743874-CDS-Ecto-sp9_F_contig9711:1822..1919Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 1823..1919 +
1692279014.7727826-CDS-Ecto-sp9_F_contig9711:1822..19191692279014.7727826-CDS-Ecto-sp9_F_contig9711:1822..1919Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 1823..1919 +
1622931061.7901702-CDS-Ecto-sp9_F_contig9711:2257..23671622931061.7901702-CDS-Ecto-sp9_F_contig9711:2257..2367Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 2258..2367 +
1692279014.780626-CDS-Ecto-sp9_F_contig9711:2257..23671692279014.780626-CDS-Ecto-sp9_F_contig9711:2257..2367Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 2258..2367 +
1622931061.8106613-CDS-Ecto-sp9_F_contig9711:3021..31181622931061.8106613-CDS-Ecto-sp9_F_contig9711:3021..3118Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 3022..3118 +
1692279014.7889-CDS-Ecto-sp9_F_contig9711:3021..31181692279014.7889-CDS-Ecto-sp9_F_contig9711:3021..3118Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 3022..3118 +
1622931061.8259342-CDS-Ecto-sp9_F_contig9711:3759..41641622931061.8259342-CDS-Ecto-sp9_F_contig9711:3759..4164Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 3760..4164 +
1692279014.799743-CDS-Ecto-sp9_F_contig9711:3759..41641692279014.799743-CDS-Ecto-sp9_F_contig9711:3759..4164Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9711 3760..4164 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9711.17817.1

>prot_Ecto-sp9_F_contig9711.17817.1 ID=prot_Ecto-sp9_F_contig9711.17817.1|Name=mRNA_Ecto-sp9_F_contig9711.17817.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=294bp
RKIHRDVKAGNILVASDGSVRLADFGESVQLTHSIAKRQTFAGSPYWMAP
EVIMAQDTYNSKADIWSLGVTAIEMIKGRPPYSDMHPMKAVLCIPNNPPP
TLGKEGNYSKHFHTFLEQCFQRDPNLRPSAQELLKHPFMKAAKRTDSLNK
LLEARRASQMMKSLFGGGLLNSTEPPQDATHKAKPTTALPASAAAAIAAA
AASKANTTSGTPLDATTNDPKTLSVEWDFGDGDESFAEQARVAAAGLGDF
DFASPVPQAAVAAAGEAWSGLGVSAAAVASPPSPGAVTPKARHG
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mRNA from alignment at Ecto-sp9_F_contig9711:582..4164+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9711.17817.1 ID=mRNA_Ecto-sp9_F_contig9711.17817.1|Name=mRNA_Ecto-sp9_F_contig9711.17817.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3583bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9711:582..4164+ (Ectocarpus species9 EcSCA_722f female)
CGGAAAATTCACCGCGACGTCAAAGCCGGAAACATTCTGGTGGCATCCGA
CGGGAGTGTGCGGTAAGCTAACCCCCCACAGCAGCGCTATTAGTATTACG
GATAATGCAATAGGCATGAGTAGAGGGTACACTCGTACAACCGTCCATGA
CGCCTAGTGCCCCCCCCCCCGCCGTTGAGCGATTCCGCTGAGTTATCACA
CGGGGCTGTACTTTGAGAGGCGAGATAACAGCTGGTATTCGTTTGACGTT
TGTAGGGTTGGAGTTTGGCGTTTCCATTGGGTTAAGGTCTCCCAGGGGTA
TGGAGGCGTGTGGCACTGATGTCATTCCTCCTCTCGCACGAGTGGCTTCG
AGCAGGGCGGCAGTCGTCCCGTGCGCATGCTGGTTTCGACCTACTATACC
GTAGAGAACCCACAAGTGCAGGTTTTGCTGATGAACGATTAATAAGACGT
GTGGCCTGTCGCGAAAGAAGAGCTCTCGTTTCCTGGTGGGAAACATAGAA
GTAAAAACAAGCTCAAGCAAAGGAACACTAAGGTACGTTTCAATATGGAG
TGGCGAATGGCCGACGGTCAGTCGTAAAACAGATGGACGCAAAGAAGAAA
TGAATGCACCCCCCCCCCCCGGTCTCCCCTCCACATGTTCCCACGTAACC
CCCCACGGCAACATCTGGTTTCCATTCCGGGGCGACGGCAAACAACGAAA
AAATGACGGCGGGAAACGAAAACGCCATGAAAAATGACAGCCTGGCTGAT
TTCGGCGAGTCGGTGCAGCTGACCCACTCCATCGCCAAGCGCCAGACATT
CGCGGGGTCACCGTACTGGATGGCGCCGGAGGTCATCATGGCGCAAGACA
CGTGAGTCTATATTTTTTTGATAACGTGGTTTATGTCGGTTTCGGCTGAT
TTTGTCGCGCGCTTCTTGCTTTGTTGTCGCCGCTTTTTTTTGGACAACCC
CTCATTTTTGTTTTTGCGGGGGGGGGGCACGAGGCATGATTTGCGTCGAT
TTTTGCTGGTGATGGGAGGAGGCGTAGACGTTTTTCGGAGACCGGAGGAG
GGAGAAAGTTGGGTAAACCTTAGTGTCAGTCGATGTGTCGCATGATATGT
GGAAGAAAATTTTGGCACGTATTACATGCGTGTATTGAGATGCGAAAGCG
TGCATGTCATACTGCTTGTTGTCCAAGCCGCTGCAATTCCTCTGTTTTCG
ACGATATATTTGGCTTTGCCCTCGAAACGAACGGGTTTCAGGTACAACTC
GAAGGCGGACATTTGGAGCCTTGGGGTGACGGCGATCGAAATGATCAAGG
GGCGGCCCCCCTACTCGGATATGCACCCGATGAAGGCGGTAAGTCAGTCT
GGACTTCGTGGCTAGCCTCTGCTGCTGTGTGTGTGTGCGCTAGCGTGCTC
TGCGTTGGGTCACGGAGAGGACAGCTCCCTTGCATTGCCAGTAACTTTGC
CGCGCATGATCTTGGCGGACGGTGCCATAGTATGATGATGATGCTACGAA
CGCTTCCTTCTCCATGTTTCTTGACCCGCTGCCGCTGCCGCCGCTACCAA
CTGCGCCGTGCATGTGTTTTCTTTATGCGCAGCAAATAGCGGTTTCTTCT
TGCGTCGTGCATGTGTTTTCTTGAGCAGCGTTTATCGTTTTCTATTTGTT
CTCGTTCTTCCTTCTGGTGCCGGCAGGTGTTGTGCATACCCAACAACCCC
CCGCCGACTCTCGGCAAGGAGGGGAACTACAGCAAGCACTTCCACACCTT
CCTCGAGCAGTGCTTCCAGCGAGACCCAAACCTCAGGTGTGTACTGTACT
GCTGTCACATGGTACCCATGGTGTACACAGCAGTTGTCATCCGAATCAGC
CTACCTGGCGGCACGTATTTCCTTGCCTTGGTGTATTTGTCTGAGCTTAC
ATTATTTGTGTTGTCACAGCTAGACCGCAAAAAAATGACGTGGCTTGTTT
GGTAAGGTACAAGTCCTGAGGTAAAAGGTACGGTGTGCTTGAGCCCAAAA
CCCGACTGCGTGTTGCAGTCGGGTCGATGACACTCAGCGCCGTTTTCTTT
GGCAGCGCTGCCAGCGGGACCCTTCCACCCGCACAGCCACATTCGCTGCC
GCTGTTGTATGTGGTGCAAGGCCTTATTTGGTCAGGCCTCAAGAGTATGA
GTCCCCCGCCCCGCCCCGCTGCCGCCGCCGCCTGCACCGCCTACATGGGA
CCCTCGCGATTAGTGCTTTGTTCAATTTTTTTTATTGATTCTTGTCTTGT
GTGTCTCGTTCGCCGTCGCGGCCGTCTCGCGGTCATACGACCGGATGTCT
GTGTGTGTTTGTTAGCATCGACGGCGCGCTAACCGGGTGACCAGTGAAAA
AACGTCAGTCTCAGTGTGGCTGAAAAACAGAAAATGAAGCATCTTGGCTG
CCATGATCTGTGTGCGTGTGTGCGTGTTTGTTTGTTTCAGGCCATCAGCG
CAAGAGTTGCTGAAGCACCCGTTCATGAAGGCGGCGAAGCGGACGGATTC
CTTGAATAAGCTCTTGGAGGCCCGACGAGCATCGCAGGTGAGCAGAAAAT
GAGTGAAAGGACGGGGGTTGTACTGGTGTAAATTGCATGCCGTAGTCGTT
AGAACCTTGATCTCGCCTCCCTACAATGCCGGGACGGAGCGATATGCCGG
AGGGGGGGGCGGGGGCATTAGTGGCAAGGGCGGGGGCTTTTTCATACGAT
GCTTAGTGAGTACGGGAGGTAGCATTTTATCGACCTATCTTGTTGCCGGC
TCGCTTTCGAAAGAAGCACGGTTGTTGTTGTACTCCTGCTACCAGCTAGA
GCCACAACAAGCCAAGTAGCATCGAGGAGACGGACGAGAGCAAAGAGTCC
TCCCTCGCTTGTTGTATCCAGCCCACGATTGTCGTCGTGCCCTCTGTCGG
CCTGTACGGTAGCCCTTTCTCCGCGTCTACGAGAACAGCAGCAGTACAGC
GGTTACGCGTGGGTCCCTCAAACAGTCCCGGGTCACTTAATTGTGCCACT
GCCCAGTATAGCACCGGTGAAATCGCCTGACACGCTTCAAGTCGTCTCTG
AATAGTACTGGTGCCCGGTAGGTATACAAGTAGTGCCCGTGAATCTGGCG
GGCACTATTGAAGAAGGACCCTCCACTACTGTTAGCACAAGTACGGGGTC
TCATTTCCGCTTCCCTACCGGTGTGCAGATGATGAAGTCGCTCTTCGGGG
GGGGGCTGCTGAACTCCACGGAGCCCCCGCAGGACGCGACGCACAAGGCT
AAGCCCACCACCGCCCTCCCGGCCTCCGCCGCGGCAGCCATCGCCGCCGC
CGCCGCATCCAAGGCGAACACCACCAGCGGCACCCCGCTAGACGCGACGA
CCAACGACCCCAAGACTCTTTCCGTGGAGTGGGATTTCGGGGACGGGGAT
GAGAGCTTCGCCGAGCAGGCTAGGGTGGCCGCCGCGGGTCTCGGGGACTT
CGACTTCGCCTCCCCGGTGCCGCAGGCGGCGGTGGCGGCGGCGGGCGAGG
CTTGGAGCGGGCTCGGCGTTTCCGCCGCTGCGGTCGCGTCCCCGCCGTCC
CCGGGGGCGGTGACGCCGAAGGCCAGGCACGGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9711:582..4164+

>mRNA_Ecto-sp9_F_contig9711.17817.1 ID=mRNA_Ecto-sp9_F_contig9711.17817.1|Name=mRNA_Ecto-sp9_F_contig9711.17817.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9711:582..4164+ (Ectocarpus species9 EcSCA_722f female)
CGGAAAATTCACCGCGACGTCAAAGCCGGAAACATTCTGGTGGCATCCGA
CGGGAGTGTGCGCGGAAAATTCACCGCGACGTCAAAGCCGGAAACATTCT
GGTGGCATCCGACGGGAGTGTGCGCCTGGCTGATTTCGGCGAGTCGGTGC
AGCTGACCCACTCCATCGCCAAGCGCCAGACATTCGCGGGGTCACCGTAC
TGGATGGCGCCGGAGGTCATCATGGCGCAAGACACCCTGGCTGATTTCGG
CGAGTCGGTGCAGCTGACCCACTCCATCGCCAAGCGCCAGACATTCGCGG
GGTCACCGTACTGGATGGCGCCGGAGGTCATCATGGCGCAAGACACGTAC
AACTCGAAGGCGGACATTTGGAGCCTTGGGGTGACGGCGATCGAAATGAT
CAAGGGGCGGCCCCCCTACTCGGATATGCACCCGATGAAGGCGGTACAAC
TCGAAGGCGGACATTTGGAGCCTTGGGGTGACGGCGATCGAAATGATCAA
GGGGCGGCCCCCCTACTCGGATATGCACCCGATGAAGGCGGTGTTGTGCA
TACCCAACAACCCCCCGCCGACTCTCGGCAAGGAGGGGAACTACAGCAAG
CACTTCCACACCTTCCTCGAGCAGTGCTTCCAGCGAGACCCAAACCTCAG
GTGTTGTGCATACCCAACAACCCCCCGCCGACTCTCGGCAAGGAGGGGAA
CTACAGCAAGCACTTCCACACCTTCCTCGAGCAGTGCTTCCAGCGAGACC
CAAACCTCAGGCCATCAGCGCAAGAGTTGCTGAAGCACCCGTTCATGAAG
GCGGCGAAGCGGACGGATTCCTTGAATAAGCTCTTGGAGGCCCGACGAGC
ATCGCAGGCCATCAGCGCAAGAGTTGCTGAAGCACCCGTTCATGAAGGCG
GCGAAGCGGACGGATTCCTTGAATAAGCTCTTGGAGGCCCGACGAGCATC
GCAGATGATGAAGTCGCTCTTCGGGGGGGGGCTGCTGAACTCCACGGAGC
CCCCGCAGGACGCGACGCACAAGGCTAAGCCCACCACCGCCCTCCCGGCC
TCCGCCGCGGCAGCCATCGCCGCCGCCGCCGCATCCAAGGCGAACACCAC
CAGCGGCACCCCGCTAGACGCGACGACCAACGACCCCAAGACTCTTTCCG
TGGAGTGGGATTTCGGGGACGGGGATGAGAGCTTCGCCGAGCAGGCTAGG
GTGGCCGCCGCGGGTCTCGGGGACTTCGACTTCGCCTCCCCGGTGCCGCA
GGCGGCGGTGGCGGCGGCGGGCGAGGCTTGGAGCGGGCTCGGCGTTTCCG
CCGCTGCGGTCGCGTCCCCGCCGTCCCCGGGGGCGGTGACGCCGAAGGCC
AGGCACGGGATGATGAAGTCGCTCTTCGGGGGGGGGCTGCTGAACTCCAC
GGAGCCCCCGCAGGACGCGACGCACAAGGCTAAGCCCACCACCGCCCTCC
CGGCCTCCGCCGCGGCAGCCATCGCCGCCGCCGCCGCATCCAAGGCGAAC
ACCACCAGCGGCACCCCGCTAGACGCGACGACCAACGACCCCAAGACTCT
TTCCGTGGAGTGGGATTTCGGGGACGGGGATGAGAGCTTCGCCGAGCAGG
CTAGGGTGGCCGCCGCGGGTCTCGGGGACTTCGACTTCGCCTCCCCGGTG
CCGCAGGCGGCGGTGGCGGCGGCGGGCGAGGCTTGGAGCGGGCTCGGCGT
TTCCGCCGCTGCGGTCGCGTCCCCGCCGTCCCCGGGGGCGGTGACGCCGA
AGGCCAGGCACGGG
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