mRNA_Ecto-sp9_F_contig9704.17812.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: EXS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.280e-102 Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
RYHDTQKRFPHLANCLKYSMSFTVALFGVF+PPHSTTTAVK ILWFVMYVVSTLYTFSWDVLQDWGLGHP+YGFLRKKRLFPR SVYYAAVVLDLVLRFNWLYSLIPPGHNPLPF+HSSTLPVVITTNV+VCEFLRRTMWGFFRVENEHLNNTE
Sbjct: 160 RYHDTQKRFPHLANCLKYSMSFTVALFGVFSPPHSTTTAVK---------ILWFVMYVVSTLYTFSWDVLQDWGLGHPMYGFLRKKRLFPRSSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVVITTNVIVCEFLRRTMWGFFRVENEHLNNTE 312
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: EXS (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE89_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.730e-48 Identity = 85/162 (52.47%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
RYHDT KRFP+LAN LKY+M+ TV++FGVF PP T Y +W +Y+VS+LY+F WD+ QDWGLGH +G+L ++R+ R+ VY+A + +DL+LRFNWLYS IPPG + H +P +TT V++ E RRT+WGFFR+ENEHL NTE
Sbjct: 642 RYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDV----YNG-----IWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTS-----HFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTE 789
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AKD0_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.560e-40 Identity = 82/170 (48.24%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPP---HSTTT-----AVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
RY DT+KRFP+LAN KY+MS TV LFG F P HS T V N+ W +++ S+LY+FSWDVL DWGLG P + FL + +FP YY + DLVLRF W+ SLIPP S LP +T M E LRRT+WGFFR+E+EH +NTE
Sbjct: 143 RYMDTKKRFPNLANATKYAMSQTVTLFGAFHPIYLLHSHETKHHKYVVSKDDINVFQE-FWMGLFIASSLYSFSWDVLMDWGLGRPEFSFLGPRLMFPNKFYYYGVMAADLVLRFMWVQSLIPPQSGA-----SFELPSYLTAITMALELLRRTLWGFFRLEHEHRHNTE 306
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK39_PYTIN) HSP 1 Score: 146 bits (369), Expect = 1.250e-37 Identity = 77/164 (46.95%), Postives = 103/164 (62.80%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHST-TTAVKVSYTNML-MTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
R HDT+ +P+L N KY+++ VALFG+F P + T A + + + I W ++ +S+LYT+ WDV DWGLG P Y FL +++F R VYY A+V DLVLRF W +LIPPG SS+LP+ + MV E RRT WGFFR+ENEHL NT+
Sbjct: 839 RIHDTETWWPNLPNAFKYALAQVVALFGLFHPFYRTGNDARDLDFAGLRGFQIAWITLFTMSSLYTWVWDVWMDWGLGRPQYKFLGDRQMFSRRWVYYVAIVADLVLRFAWTLTLIPPGS-------SSSLPLYLQPFTMVLELFRRTYWGFFRLENEHLRNTQ 995
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Uncharacterized (protein AlNc14C153G7578 n=2 Tax=Albugo TaxID=65356 RepID=F0WM75_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.050e-36 Identity = 73/162 (45.06%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
R HDTQK +P+ N +KY+++ VALFG+F P + +V I+W ++ +S+LYT+ WDV DWGLG P + +L +++F RL VYY A+V DL LRF+W SL+PP S TLP+ + MV E RRT W FFR+ENEHL NT+
Sbjct: 502 RIHDTQKWWPNFPNAIKYALAQVVALFGIFHPFYP-----QVLNHVQSFQIVWVFLFTISSLYTWIWDVGMDWGLGRPQFHYLGDRQMFGRLWVYYVAIVADLFLRFSWTLSLVPPNT-------SRTLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQ 651
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJL2_FISSO) HSP 1 Score: 143 bits (360), Expect = 1.880e-36 Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNT 498
RY DT RFPHLAN KY+++ TV LFG F P + T + + L + W +V S+LY+F WDV DWGLG P + FL + ++PR +Y+ + LDLVLRF W+ +L+PP + LP +T M+ E RRT+WGF R+ENEH +NT
Sbjct: 619 RYMDTGNRFPHLANAFKYALTQTVTLFGAFHPLYMTN-----KHESALFQLFWTCAFVSSSLYSFFWDVYMDWGLGRPEFRFLGPRLMYPRRKLYFVIIGLDLVLRFAWVLTLVPPESGA-----AFALPAYLTAVSMMLELFRRTVWGFLRLENEHRSNT 769
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNN5_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.640e-36 Identity = 75/171 (43.86%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSY---------TNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
RY DT KR+P+LAN KY+MS TV LFG F P + K+ Y N + + W +++ S+LY+F+WDV DWGLG P Y L + +FP YY +V+DLVLRF W+ +L+PP S LP +T M E +RRT+WGFFR+E+EH NTE
Sbjct: 654 RYTDTGKRWPNLANAFKYAMSQTVTLFGAFHPLYMLHMNKKMLYEAEIALESNANNIFQVFWMGLFICSSLYSFTWDVYMDWGLGKPQYQGLGPRLMFPNRLHYYGVIVIDLVLRFMWVSTLLPPQSGA-----SFELPQYLTALTMSLELMRRTLWGFFRLEHEHRANTE 819
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: EXS (domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XES5_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.310e-35 Identity = 70/162 (43.21%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
R +DT +P+L N KY+++ VALFG+F P ++ + S + W V++ +S+LYT+ WDV DWGLGHP + FL +++F R VYY A+V DL LRF W SL+PP + + LP+ + MV E RRT W FFR+ENEHL NT+
Sbjct: 123 RIYDTGTWWPNLPNAFKYALAQVVALFGLFHPFYAGDS--DGSGHLQAFQVTWVVLFALSSLYTWVWDVTMDWGLGHPEHKFLSDRQMFSRTWVYYVAIVADLFLRFAWTLSLVPPQSSRM-------LPLYLQPFTMVAELFRRTFWSFFRLENEHLRNTQ 275
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4Z2_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.640e-35 Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTNMLMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNN 495
RY DT R+PHLAN KY+ S TV LFG F P + T KV + + W +++ S+LY+F+WDV DWGLG P Y +L +FP+ Y+ + LDLVLRF W+ +L+PP +P ++ M+ E RRT+WGF R+ENEH +N
Sbjct: 139 RYIDTNDRWPHLANAFKYAFSQTVTLFGAFHPLYLEHTR-KVEKGLNVFQLTWLFIFISSSLYSFTWDVYMDWGLGRPKYKYLGPSLMFPKRGYYFMVIALDLVLRFMWVLTLLPPQSGA-----KFEIPQYLSALTMMLELFRRTIWGFLRLENEHRSN 292
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRU7_PYTOL) HSP 1 Score: 139 bits (351), Expect = 2.400e-35 Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 16 RYHDTQKRFPHLANCLKYSMSFTVALFGVFTP---PHSTTTAVKVSYTNM-LMTILWFVMYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFIHSSTLPVVITTNVMVCEFLRRTMWGFFRVENEHLNNTE 501
R +D++ +P+L N +KY+++ V LFG+F P HS V S + ++W ++ +S+LYT+ WDV DWGLG P Y FL +++F RL VYYAA++ D LRF W SLIPP H+ SS+LP+ + MV E RRT WGFFR+ENEHL NT+
Sbjct: 486 RIYDSETWWPNLPNAVKYALAQVVVLFGLFHPFYRTHSHFEDVPESLGGLHTFQLVWITLFTLSSLYTWVWDVWMDWGLGRPQYKFLGDRQMFSRLWVYYAAILADFFLRFAWTLSLIPP-HS------SSSLPLYLQPFTMVIELFRRTFWGFFRLENEHLRNTQ 644 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9704.17812.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9704.17812.1 >prot_Ecto-sp9_F_contig9704.17812.1 ID=prot_Ecto-sp9_F_contig9704.17812.1|Name=mRNA_Ecto-sp9_F_contig9704.17812.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=167bp MAPDGRYHDTQKRFPHLANCLKYSMSFTVALFGVFTPPHSTTTAVKVSYTback to top mRNA from alignment at Ecto-sp9_F_contig9704:3248..4475+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9704.17812.1 ID=mRNA_Ecto-sp9_F_contig9704.17812.1|Name=mRNA_Ecto-sp9_F_contig9704.17812.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1228bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9704:3248..4475+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9704:3248..4475+ >mRNA_Ecto-sp9_F_contig9704.17812.1 ID=mRNA_Ecto-sp9_F_contig9704.17812.1|Name=mRNA_Ecto-sp9_F_contig9704.17812.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1002bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9704:3248..4475+ (Ectocarpus species9 EcSCA_722f female)back to top |