mRNA_Ecto-sp9_F_contig97.17800.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig97.17800.1
Unique NamemRNA_Ecto-sp9_F_contig97.17800.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Calcium (homeostasis endoplasmic reticulum protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV9_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 8.310e-152
Identity = 241/259 (93.05%), Postives = 244/259 (94.21%), Query Frame = 1 
Query:    1 MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDKGRRNRDDGFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYRRNKSYSFRRF 777
            MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEER    XXXXXXXXXX       XXX  QND+GRRNRD+GFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQ  MDKSGIGGGDGS+KKKTDAAEQDAFEAYRRNKSYSFRRF
Sbjct:    1 MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERKKEKXXXXXXXXXXLAGKEGGXXXSGQNDRGRRNRDEGFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQ--MDKSGIGGGDGSIKKKTDAAEQDAFEAYRRNKSYSFRRF 257
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J830_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 1.440e-147
Identity = 256/259 (98.84%), Postives = 257/259 (99.23%), Query Frame = 1 
Query:    1 MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDKGRRNRDDGFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYRRNKSYSFRRF 777
            MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQND+GRRNRDDGFG GGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKT AAEQDAFEAYRRNKSYSFRRF
Sbjct:  431 MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDRGRRNRDDGFGVGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTAAAEQDAFEAYRRNKSYSFRRF 689
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Calcium (homeostasis endoplasmic reticulum protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.820e-29
Identity = 114/262 (43.51%), Postives = 141/262 (53.82%), Query Frame = 1 
Query:   25 PWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXX-------QNDKG--RRNRDDGFGAGGSQQGLRAK-QAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIG-----GGDGSVKKKTDAAEQDAFEAYRRNKSYS 765
            PW     P +G   SVQS     FPVAAG+A   HG D  ++ + VG M  ++R +LR G + Y P++   +P    PHIEPGRL+VR+D+FY R TLE    ERXXXXXXXXXXXXXXXXXX               + D+G  R  RD G   GG   G R   QA  E +         + EEN+G   LKKMGW EG GLG    G+ EP+ G GQ  MD+ GIG     GG G          +D +E YR+ KSY+
Sbjct:    5 PWGAPHTPPVGAPASVQS----LFPVAAGMA--PHGQD--IDNMQVGIMVALVRAALRGGAKPYAPINAAAMPPAKPPHIEPGRLEVRLDDFYRRLTLEDDKRERXXXXXXXXXXXXXXXXXXRGRGDYQHNRRSDSRERDRGGYRERRDWGDRGGGRGGGYRPPPQAMPETQ---------ISEENVGFQALKKMGWQEGAGLGVGGKGIAEPVKGGGQ--MDRGGIGVKPPSGGGG--------GPEDMYEQYRKAKSYN 239
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STI1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 9.370e-11
Identity = 84/209 (40.19%), Postives = 116/209 (55.50%), Query Frame = 1 
Query:  145 LEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDKGRRNRDDGFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYRRNKSYSFR 771
            L  +PVG MAG+++V+L  G   ++P+D+  +P      +EPGRL+ RV EFY    LE+    R XXXXXXXXXXXXXXXXXXXXXXXXX   +     D G+            +   E  +  QG +  +G +N+GH +L++MGW EG GLG+  +G+ EPI    Q S    G+G G      +     +D F  YR  +S  +R
Sbjct:  162 LSTIPVGVMAGLVKVALNGGHEPWRPLDLTTMPTAAPMPVEPGRLEARVKEFYR--LLEKDKLRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYEQLDSGYST----------RRVDEDATRRQGLDAAIGADNMGHQMLQQMGWREG-GLGARGTGIAEPIDVRQQQS--NQGVGAG------QQQQQPEDEFSQYRTQRSSQYR 349
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU05_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.380e-9
Identity = 57/205 (27.80%), Postives = 86/205 (41.95%), Query Frame = 1 
Query:  145 LEKLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSRATLEQVHEERXXXXXXXXXXXXXXXXXXXXXXXXXXQNDKGRRNRDDGFGAGGSQQGLRAKQAQLELESDMQGREKV----LGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYR 747
            L  +PVG MA +L  +L  G   +KP+D   +P++  P IE  +L+ R+  FY    L++ H+ +                                                R +  Q E+ + M   +K     +G+EN+G  +L+ MGW EGTGLGS  +G  EPI+ +GQ+  D  GIG        +   A  D F  YR
Sbjct:   31 LASVPVGIMADVLSTALAAGHEPWKPLDTSKIPQFNPPIIESNQLEERIANFYRTVDLKRGHKRKADDHTIQQQQAPPQRRKYGPKID-------------------------RFELLQREI-APMIPHKKTNINGIGDENVGKQMLRGMGWQEGTGLGSQGTGRAEPIADAGQS--DTVGIGS-------RPPGANSDVFSQYR 200
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMK1_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 6.000e-7
Identity = 23/52 (44.23%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:  154 LPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEFYSR 309
            +PVG +  +++V+L+ G R Y+P+++K LP    PHIEPGRL+V V+++Y +
Sbjct:  293 VPVGVLVSLVKVALKAGHREYRPLNLKALPPAAPPHIEPGRLEVIVEQYYRK 344
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: calcium (homeostasis endoplasmic reticulum protein-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3CE25)

HSP 1 Score: 58.9 bits (141), Expect = 2.960e-6
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:  532 EKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTD------AAEQDAFEAYRRNKSYSF 768
            E+ L E N+GH +LKKMGW EG GLG S+ G+ +PISG               G V+ K D      A  +D FEAYR++KSYSF
Sbjct:  756 EQRLDESNVGHQMLKKMGW-EGAGLGRSQQGIYDPISG---------------GEVRDKFDKFKGVGADMKDPFEAYRKSKSYSF 824
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: G-patch (domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YFJ2_DAUCS)

HSP 1 Score: 57.4 bits (137), Expect = 6.320e-6
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 1 
Query:  550 ENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGD-GSVKKKTDAAEQDAFEAYRRNKSYSFR 771
            +NIGH LL KMGW EG GLGSSRSG+ +PIS +G   +D  G+G    G VK      + D +E Y++     +R
Sbjct:  263 DNIGHKLLSKMGWKEGEGLGSSRSGIADPIS-AGNVKIDNLGVGASKPGEVK-----PDDDIYEQYKKRMMLGYR 331
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: SURP (and G-patch domain-containing protein 1-like protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8C1N5_PUNGR)

HSP 1 Score: 57.4 bits (137), Expect = 7.420e-6
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 1 
Query:  550 ENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYRRNKSYSFR 771
            +N+GH LL KMGW EG GLGSSRSG+ +PI  +G+   D  GIG    + K     AE D +E Y++     +R
Sbjct:  345 DNVGHRLLSKMGWKEGEGLGSSRSGIADPIM-AGEVKKDNLGIG----AQKPGEVTAEDDIYEQYKKRMMLGYR 413
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BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Match: Calcium (homeostasis endoplasmic reticulum protein n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SNZ9_STYPI)

HSP 1 Score: 57.4 bits (137), Expect = 9.520e-6
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:  532 EKVLGEENIGHNLLKKMGWSEGTGLGSSRSGMVEPISGSG-QASMDK-SGIGGGDGSVKKKTDAAEQDAFEAYRRNKSYSF 768
            E+ L E N+GH +LKKMGW EG GLG S  G+ +PISG   +   DK  G+G           A  +D FEAYR++KSYSF
Sbjct:  727 EQRLDESNVGHQMLKKMGW-EGAGLGRSMQGIQDPISGGEIRDKFDKFKGVG-----------ADMKDPFEAYRKSKSYSF 795
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig97.17800.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Calcium8.310e-15293.05homeostasis endoplasmic reticulum protein n=1 Tax=... [more]
Uncharacterized1.440e-14798.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Calcium1.820e-2943.51homeostasis endoplasmic reticulum protein n=1 Tax=... [more]
Hypothetical9.370e-1140.19protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical1.380e-927.80protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical6.000e-744.23protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
calcium2.960e-645.88homeostasis endoplasmic reticulum protein-like n=1... [more]
G-patch6.320e-645.33domain-containing protein n=3 Tax=Daucus carota su... [more]
SURP7.420e-644.59and G-patch domain-containing protein 1-like prote... [more]
Calcium9.520e-648.15homeostasis endoplasmic reticulum protein n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig97contigEcto-sp9_F_contig97:1287..5616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.3
Seed ortholog evalue6.4e-121
Seed eggNOG ortholog2880.D8LFV9
Preferred nameCHERP
KEGG koko:K12841
KEGG Pathwayko03040,map03040
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007204,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016528,GO:0016529,GO:0019725,GO:0023051,GO:0023056,GO:0030001,GO:0030003,GO:0031090,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0033017,GO:0034220,GO:0034641,GO:0042127,GO:0042175,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050848,GO:0050850,GO:0051179,GO:0051209,GO:0051234,GO:0051282,GO:0051283,GO:0051480,GO:0051641,GO:0051649,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0060402,GO:0065007,GO:0065008,GO:0070013,GO:0070588,GO:0070838,GO:0070884,GO:0070886,GO:0071704,GO:0072503,GO:0072507,GO:0072511,GO:0090304,GO:0097553,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827,GO:0106056,GO:0106058,GO:1901360,GO:1902531,GO:1902533
EggNOG free text desc.positive regulation of calcineurin-mediated signaling
EggNOG OGsKOG4368@1,KOG4368@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionG-patch domain
Ec32 orthologEc-05_005330.1
Exons7
Model size780
Cds size780
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931058.9781215-CDS-Ecto-sp9_F_contig97:1286..13391622931058.9781215-CDS-Ecto-sp9_F_contig97:1286..1339Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 1287..1339 +
1692279013.3119118-CDS-Ecto-sp9_F_contig97:1286..13391692279013.3119118-CDS-Ecto-sp9_F_contig97:1286..1339Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 1287..1339 +
1622931058.9985151-CDS-Ecto-sp9_F_contig97:2032..21651622931058.9985151-CDS-Ecto-sp9_F_contig97:2032..2165Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 2033..2165 +
1692279013.3258927-CDS-Ecto-sp9_F_contig97:2032..21651692279013.3258927-CDS-Ecto-sp9_F_contig97:2032..2165Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 2033..2165 +
1622931059.0157516-CDS-Ecto-sp9_F_contig97:2985..30811622931059.0157516-CDS-Ecto-sp9_F_contig97:2985..3081Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 2986..3081 +
1692279013.338167-CDS-Ecto-sp9_F_contig97:2985..30811692279013.338167-CDS-Ecto-sp9_F_contig97:2985..3081Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 2986..3081 +
1622931059.0344272-CDS-Ecto-sp9_F_contig97:3533..36881622931059.0344272-CDS-Ecto-sp9_F_contig97:3533..3688Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 3534..3688 +
1692279013.3577034-CDS-Ecto-sp9_F_contig97:3533..36881692279013.3577034-CDS-Ecto-sp9_F_contig97:3533..3688Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 3534..3688 +
1622931059.072002-CDS-Ecto-sp9_F_contig97:4222..43681622931059.072002-CDS-Ecto-sp9_F_contig97:4222..4368Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 4223..4368 +
1692279013.3707235-CDS-Ecto-sp9_F_contig97:4222..43681692279013.3707235-CDS-Ecto-sp9_F_contig97:4222..4368Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 4223..4368 +
1622931059.0970058-CDS-Ecto-sp9_F_contig97:4704..47811622931059.0970058-CDS-Ecto-sp9_F_contig97:4704..4781Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 4705..4781 +
1692279013.3926108-CDS-Ecto-sp9_F_contig97:4704..47811692279013.3926108-CDS-Ecto-sp9_F_contig97:4704..4781Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 4705..4781 +
1622931059.1125336-CDS-Ecto-sp9_F_contig97:5496..56161622931059.1125336-CDS-Ecto-sp9_F_contig97:5496..5616Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 5497..5616 +
1692279013.4031677-CDS-Ecto-sp9_F_contig97:5496..56161692279013.4031677-CDS-Ecto-sp9_F_contig97:5496..5616Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig97 5497..5616 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig97.17800.1prot_Ecto-sp9_F_contig97.17800.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig97 1287..5616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig97.17800.1

>prot_Ecto-sp9_F_contig97.17800.1 ID=prot_Ecto-sp9_F_contig97.17800.1|Name=mRNA_Ecto-sp9_F_contig97.17800.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=260bp
MPACHVQYPWRGALYPVMGKAQSVQSDNASKFPVAAGLASTAHGTDNMLE
KLPVGTMAGILRVSLRNGFRRYKPVDIKLLPKYVTPHIEPGRLDVRVDEF
YSRATLEQVHEERKKEKEQRKLEEERKLAGKEGGGGGGGQNDKGRRNRDD
GFGAGGSQQGLRAKQAQLELESDMQGREKVLGEENIGHNLLKKMGWSEGT
GLGSSRSGMVEPISGSGQASMDKSGIGGGDGSVKKKTDAAEQDAFEAYRR
NKSYSFRRF*
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mRNA from alignment at Ecto-sp9_F_contig97:1287..5616+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig97.17800.1 ID=mRNA_Ecto-sp9_F_contig97.17800.1|Name=mRNA_Ecto-sp9_F_contig97.17800.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4330bp|location=Sequence derived from alignment at Ecto-sp9_F_contig97:1287..5616+ (Ectocarpus species9 EcSCA_722f female)
ATGCCCGCGTGCCACGTGCAGTACCCGTGGCGGGGGGCCCTGTACCCGGT
GATGTGAGTTTTTTATTTTTTTGTTTTTTTTTGTTTTTTCCTGTTTCTTT
TTGGTGTCTCTGGTGGTGTGTGTGTTACTGTTGTTGATTTCTCTATTTGA
TGGTTTTTGTGTTGTTTTGGTATCCCCCTTTCTTTTTTTGCAGAATTATT
TTTTTGGCTCGGTTGTTTCCGCGTTTGTGGCGGTGTGATTTTATTGGTTT
CTATTTCGGTAGTTTCGTGTTGCCACATATGCGGTTTTTCCCGCTTTTTG
CAAGTCGTTGGTATGAAAAACACAGTCGAGAAAACGACAAATACGAACAA
ACACTCCCAGTGTGTGCTTCTCCCTTCAGTGTGTGCTTCTCCCTTCAGTG
TGGCCCCGGCTGGTGCGTCCAAAACACGTATTGCAAAGATGTGGTACAAA
CTGGAAATGACACACAACACGGCCGTGAAAATGCGGCTGGAAGAGCTTGG
TATGAAGAAGACCCTCACTTCTTGGTTGTCCCATTACCTTGTTCGGTCAC
CGCGTTTCGCCTTTCGTTAACAGAGGCATGACGCAGCAAATGTACAAATC
AGACTTGCAGGTAAAAGTAGTACGAAATGTAACGGAAGGATACCACTTAA
GGCACACGCTTGTTGTTCGGAGCAGCTCGTCCCATAACCTTGTTCGACCA
CCCTGTTTTTTGTTTTTTGCCGCCGGCGCCTTTCGGTGCTACGCAGGGGC
AAGGCGCAGAGCGTTCAGAGCGACAACGCCAGCAAGTTCCCTGTGGCGGC
AGGGCTGGCCAGCACGGCACACGGGACGGATAACATGCTCGAGAAGCTGC
CGGTGGGCACGATGGCCGGGATCCTCAGGGTGAGCAGGCTTTGCCTCATC
AACGCGGGGGGAGGGGGGGGGGGGGGCAGCAGCTTGGCTCTGCATCCTTG
GCTAGGCATTACCCCCCAATCGCTGCCACTTGGTTCGAAACGGGCAAAAA
AAGGAAANNNNNNNNNNGGGGGGGCGTGGGGGCGGCCGGGGCGAGGGGGG
GGAGGGGGGTGGAGGAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCA
GCAGCTTGGCTATGCATGCTTGGCTATGCATTACTCCACAATCGCTGCTA
CTTGGTTAGAAAACGGCAAAAATAGGAAAAGAACACGTGGCGAGAAAGAA
ACAAGAGACATCAAGTGGTTGTTGCCCGACGTCCATTGCCCGGAAAGACG
AACACTTCCTGGGTAGTTTTCTGTGTAGTGTTTGCGTGTGTAAAAAGAGG
GGTGTGTCGGCCAGGGAGATGGGCGAGGGGAAGAGCGAGCCATGACTGGC
ATTAGACCGATGGACAATCGCAGATGCATGTACTGGAGACATGCGAACGA
TGCCATGAGTCGTCGTGGTGGGAGTGAAATAGTGCCAGAGAGATGCAGAG
AGAGAGACAATAGGCAACAGAGGATGAGAGGATGAGAGGGCGGGCATGTG
AGAGGGAGAGAAGCAAGTTGGTCCTCCCTTGCTCAGAGGGTACCCTTACG
TGTTGCGCCCGCGTTCACGTGTGGATCTGTTATTTCACGAGGCGAAACCA
GACAAGCCACACAGATTTCGCTGCACCACTACTGTCCCCCGCATCTGTCT
GATACTTCGTTTATTGTGCAAATTTTGCTGTGACATGACTTGTGCGTAGG
TTTCTCTTCGGAATGGGTTCCGGAGATACAAGCCGGTGGACATCAAGCTG
CTGCCCAAGTACGTGACTCCTCACATCGAGCCCGGGAGACTAGACGTGAG
TATTTCGATCCTTCCCTGGCCCTTTTGGCTGGTACAGAGCCCGTGCAGCA
ATATAAACGATCGCGGGTTGCCATCGTCGTGGGAGGTAGCGGTTTGGTCA
ACCGTTGTCACCATCGTGGTGGTCGTCGACGTCTTCGTTGTTCCAAAATA
TCGGCGTGAGTGTGAAAGTCACGTTTACCGCCGGTGCTAGGGTTTCGGGT
TGACGATTTCCTTCATCACTCTCGCCACCACATTTTTTGCTGAGTGGTTA
GAAGTTGTTTTGTATTATTTTTCTTGTCGGGTCGATTTGTCTCTTGATTG
CTATCCCTTGGTGCGTCGCGTGTCTCGCGTGAGCGGATACAAGTTTTTTT
TTTCATTTTCATGTTTCGTTTCTATTTTGGCATGTCTCTTATTCAACCCT
TGTTGCGTCGCTTCTTGTCTTTTGTTTTGCACCCGGCCTAACAATAGGTC
CGCGTGGATGAGTTCTATAGCCGGGCCACTCTCGAACAAGTGCACGAGGA
GCGGAAGAAGGAGAAGGAGCAGAGAAAACTGGAAGAAGAGAGGAAACTCG
CGGGGAAAGAAGGCGGCGGGGGCGGCGGCGGGCAAAACGACAAGGGCCGA
AGGTACGGTACGGCGGAAGTAGTCAGTTTGCATCCCGTCACTGCGGTCCA
TAACGGATTGTTTCTTTTAGAGTGGTTCTGGTTTTGACGGAACCGCTGAC
TCCCTTGCAAACTTTTGGGGTTCTCCAGCAAGATCCCTTTACCTATGCAG
TGTGCTTGCCTCGGTGCATCAAACCCCAAGAATGATAAACAATACAACGA
CTTATCGCTTCGTTCCCTTCACCAATCTCAAACAAACAACTGTAACACCT
CGATTTTTCCATCCCCAGCGCGTGTTGGGGATTTGGAGTGCTCTGTGGTG
GTGGTGGTAGTAGCGGCCGCGTCGGTTCAAAGCAGAGAGTATTCTGAGCC
GGTCTCCGGTGTGCCGCCAGACCACACGGTTTCCTCGCGGTCAAGTCGTG
CAAGAGTCTGGGCACAAATAGCGCCTTTCCTTAACAGATAATTTACATAC
AAAGACAGAAAGACTTGCACACCCGTTCTTATGTATGTTTTTTTTCGCGG
TGAAACGGCTATTGCCTGTGGCTTCGTTTTGTGCAGGAATCGGGACGACG
GGTTCGGGGCCGGAGGCAGCCAGCAAGGCCTTCGGGCGAAGCAGGCGCAG
CTTGAGCTCGAGAGCGACATGCAGGGCAGGGAAAAGGTTCTGGGCGAGGA
GAACATCGGCCACAACCTCCTCAAGAAGATGGGTGAGTTGGTCGTCGTTT
GTTTGTTTGTTGTTGTTGTTCTTGTTGGTCTTCATTTGTTTGTTTGTTTG
TTTGGTGTGGTTGTTGTTGCTGTTGTTGTTGCTGTTGTCGAGTTTGCTGC
TGCTGCTGTTGTTGTGTTGTTGATGTTGATGTTGGAGCGGCAGTTGCTTC
TGTTGTTGCCGTTGCTGTTGTTGTTGCTGTTGTGTCTCCTCTTGCTTGTG
TTGGGTGTGCATGTTACTGCTGAACTACCGGGCACTCGATTGGCCTCAAC
CACTATTTAACTCTTGTCATAATGCCCGGCCGTGTCGCTCGTCGTTGACC
CTCATGACGTCATGACAGGATGGAGCGAAGGCACCGGCCTCGGCTCGTCA
AGATCAGGCATGGTGGAACCCATCTCCGGCTCCGGCCAGGCAAGTGTCAA
ATCAATCAAGGGCTGCCTGCTGGTTGGCTAACCCGCTCTATTTCATGTGT
TGTTGCTTGTTTCCTTCGCATCGAAACAGCACTGGGGTGTGGCCAGCGGT
CTTGGTCTCGGTCGTTGTTGACGTTTGGTTTGGTCTACATACCAGTGGGT
TTTTTTTTTTGTGGACATGTGTTTTACGGCGTGTTGTTGTGCCTGCGCGA
AGAGGTTGGAGGTGTCAGGTCTTGTGTTTCGTTTCTTCTTTTTTCTACCA
TCGGTCGTTCGCCCAAGTCAGTACTCGTTTTTGCTTGCGAGAGGTGTCAT
CAACGGTTAGTTGCCAACCTGTCACCCACACATCGCACGGATTCGACCCT
ATAACGTGTAGTTTATGACTGCGTTCGTGCCGCAACCCTCCATGTACGAG
GGAATATCGTGTCCAGCCAGGGTCTCCTCGGTGTTAGCGTCATCAGACCG
TTCCATGTGCATGCCTGATGACTGCTACCGCAGGTGTTGCCACTTGCTGC
CTTCACTTTAAGAAACCTTTGCGGTCGTTGCTCAGTACCTTCGAACATCC
GCACCCGCCCAACTGACGCGGACGCCTCCCATGGCCACAGCCCAAACTAT
ATCCAAAAAGGGCATGAACCTCTGAAAAGCAAAACAAGAAAAGTGGGCCC
TGAGAAATTCATCCAAACATGGTTAGTTTTGACTTGTTTTCGCCGGGTTT
TTTTTTGCAGATGGACAAGTCGGGCATCGGGGGAGGGGACGGCAGCGTCA
AGAAGAAGACGGATGCAGCGGAACAGGATGCCTTCGAGGCCTACCGACGA
AACAAGAGCTACTCGTTCCGCAGATTCTAA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig97:1287..5616+

>mRNA_Ecto-sp9_F_contig97.17800.1 ID=mRNA_Ecto-sp9_F_contig97.17800.1|Name=mRNA_Ecto-sp9_F_contig97.17800.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1560bp|location=Sequence derived from alignment at Ecto-sp9_F_contig97:1287..5616+ (Ectocarpus species9 EcSCA_722f female)
ATGCCCGCGTGCCACGTGCAGTACCCGTGGCGGGGGGCCCTGTACCCGGT
GATATGCCCGCGTGCCACGTGCAGTACCCGTGGCGGGGGGCCCTGTACCC
GGTGATGGGCAAGGCGCAGAGCGTTCAGAGCGACAACGCCAGCAAGTTCC
CTGTGGCGGCAGGGCTGGCCAGCACGGCACACGGGACGGATAACATGCTC
GAGAAGCTGCCGGTGGGCACGATGGCCGGGATCCTCAGGGGGCAAGGCGC
AGAGCGTTCAGAGCGACAACGCCAGCAAGTTCCCTGTGGCGGCAGGGCTG
GCCAGCACGGCACACGGGACGGATAACATGCTCGAGAAGCTGCCGGTGGG
CACGATGGCCGGGATCCTCAGGGTTTCTCTTCGGAATGGGTTCCGGAGAT
ACAAGCCGGTGGACATCAAGCTGCTGCCCAAGTACGTGACTCCTCACATC
GAGCCCGGGAGACTAGACGTTTCTCTTCGGAATGGGTTCCGGAGATACAA
GCCGGTGGACATCAAGCTGCTGCCCAAGTACGTGACTCCTCACATCGAGC
CCGGGAGACTAGACGTCCGCGTGGATGAGTTCTATAGCCGGGCCACTCTC
GAACAAGTGCACGAGGAGCGGAAGAAGGAGAAGGAGCAGAGAAAACTGGA
AGAAGAGAGGAAACTCGCGGGGAAAGAAGGCGGCGGGGGCGGCGGCGGGC
AAAACGACAAGGGCCGAAGGTCCGCGTGGATGAGTTCTATAGCCGGGCCA
CTCTCGAACAAGTGCACGAGGAGCGGAAGAAGGAGAAGGAGCAGAGAAAA
CTGGAAGAAGAGAGGAAACTCGCGGGGAAAGAAGGCGGCGGGGGCGGCGG
CGGGCAAAACGACAAGGGCCGAAGGAATCGGGACGACGGGTTCGGGGCCG
GAGGCAGCCAGCAAGGCCTTCGGGCGAAGCAGGCGCAGCTTGAGCTCGAG
AGCGACATGCAGGGCAGGGAAAAGGTTCTGGGCGAGGAGAACATCGGCCA
CAACCTCCTCAAGAAGATGGGAATCGGGACGACGGGTTCGGGGCCGGAGG
CAGCCAGCAAGGCCTTCGGGCGAAGCAGGCGCAGCTTGAGCTCGAGAGCG
ACATGCAGGGCAGGGAAAAGGTTCTGGGCGAGGAGAACATCGGCCACAAC
CTCCTCAAGAAGATGGGATGGAGCGAAGGCACCGGCCTCGGCTCGTCAAG
ATCAGGCATGGTGGAACCCATCTCCGGCTCCGGCCAGGCAAGTGATGGAG
CGAAGGCACCGGCCTCGGCTCGTCAAGATCAGGCATGGTGGAACCCATCT
CCGGCTCCGGCCAGGCAAGTATGGACAAGTCGGGCATCGGGGGAGGGGAC
GGCAGCGTCAAGAAGAAGACGGATGCAGCGGAACAGGATGCCTTCGAGGC
CTACCGACGAAACAAGAGCTACTCGTTCCGCAGATTCTAAATGGACAAGT
CGGGCATCGGGGGAGGGGACGGCAGCGTCAAGAAGAAGACGGATGCAGCG
GAACAGGATGCCTTCGAGGCCTACCGACGAAACAAGAGCTACTCGTTCCG
CAGATTCTAA
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