mRNA_Ecto-sp9_F_contig9637.17747.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9637.17747.1
Unique NamemRNA_Ecto-sp9_F_contig9637.17747.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K482_9PHAE)

HSP 1 Score: 579 bits (1493), Expect = 1.170e-204
Identity = 285/298 (95.64%), Postives = 289/298 (96.98%), Query Frame = 1
Query:    1 MPGPKSPVERRKETQPILTDVEQVEHNGHIVDRTIETVKGGWRQDLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGEDGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVAT 894
            MPGPKSPVERRK TQPILTDVEQ+EHNGHIVDRTIETVKGGWRQDLSSI LLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCG MML ARSVMDEWIGEDGGVP+VKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGI+TLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDE LGLVDTYKQLYKCVQLPSVRSFSSVLLTCR+    T
Sbjct:   18 MPGPKSPVERRKATQPILTDVEQMEHNGHIVDRTIETVKGGWRQDLSSITLLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGGMMLSARSVMDEWIGEDGGVPHVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIVTLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEFLGLVDTYKQLYKCVQLPSVRSFSSVLLTCRMAFAVT 315          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DJ58_HETAK)

HSP 1 Score: 360 bits (924), Expect = 9.840e-119
Identity = 167/258 (64.73%), Postives = 209/258 (81.01%), Query Frame = 1
Query:  124 WRQDLSSIILLLVLYTLQGIPMGLSGSIPFLLVDK-VSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGEDGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVAT 894
            WR DL SIILLL+LYTLQGIPMGLSGS+PFLL DK VSY+EQA+FSLV+ PFSLKL+WAPLVDS Y P+ GRRKSWLVP QL+CG++ML A  V+D+W+G  G +P V  LT YFL LYF+MATQDIAVDGWALTMLS ENVG+ASTCNTIGQT+G+F++ VGFLAL D GVCNKY RS PS+ G++TL++F+ FW  VF+ TT+++  FK E E    +E  GLV+TYK+ ++C++LP+V+    +L+TC+I   AT
Sbjct:   40 WRDDLGSIILLLILYTLQGIPMGLSGSVPFLLQDKEVSYAEQALFSLVTLPFSLKLIWAPLVDSTYLPAVGRRKSWLVPVQLICGLVMLGATMVIDDWVGATGAIPSVPNLTWYFLFLYFLMATQDIAVDGWALTMLSEENVGYASTCNTIGQTIGYFVAHVGFLALQDAGVCNKYLRSVPSETGMVTLASFMNFWAIVFIVTTLYVWFFKAEKEEVGGEETDGLVETYKKAWQCIRLPAVKKLCIILMTCKIAFAAT 297          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Z6_PYTOL)

HSP 1 Score: 317 bits (812), Expect = 6.610e-102
Identity = 155/254 (61.02%), Postives = 193/254 (75.98%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D SS++LLL+LYTLQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDS+Y PSFGRRKSWL+P Q +C  +M+     + E +GE DG  P+V  LT +F  LYF+MATQDIAVDGWALTMLS +NVG ASTCNT+GQTLG+F++ VGFLAL+DP  CN YFRS P   G+ITL+ F+ FWG V   TT+ + +FK E E+   +E L + +TYKQ+Y  ++LPSV S S +LLT +IG  A
Sbjct:   48 DWSSMLLLLLLYTLQGIPMGLSASIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSIYSPSFGRRKSWLIPVQFICAGLMIGGSFFISELLGEGDGQKPHVIYLTIFFFVLYFMMATQDIAVDGWALTMLSEKNVGHASTCNTVGQTLGYFVAYVGFLALHDPATCNSYFRSTPQPDGMITLAGFMNFWGWVMFVTTVAVGIFKKEKED--TEEQLSIAETYKQMYSVLRLPSVISLSIILLTSKIGFAA 299          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRN8_9STRA)

HSP 1 Score: 310 bits (793), Expect = 5.580e-99
Identity = 154/254 (60.63%), Postives = 184/254 (72.44%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D  SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY   FGRRKSWL+P Q  C  +M+     M + +GE +G  P+V  LTA+F  LYF+MATQDIAVDGWALTMLS +NVG ASTCNT+GQT+GFF++ VGFLAL DPG CN Y RSEP D G+++L  F+ FWG V   TT+ + LFK E       E L +  TY Q+Y  ++LPSV S S VLLT +IG  A
Sbjct:   52 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYNERFGRRKSWLIPVQFTCAALMVGGSWFMSDLLGEGEGQKPHVLYLTAFFFVLYFMMATQDIAVDGWALTMLSAKNVGHASTCNTVGQTVGFFVAYVGFLALNDPGTCNSYLRSEPDDEGLVSLPGFMSFWGWVMFVTTLGVWLFKHEKPETHGGERLTIAQTYSQMYSVLRLPSVVSLSVVLLTSKIGFAA 305          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFF3_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.030e-98
Identity = 148/254 (58.27%), Postives = 187/254 (73.62%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D SSI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDS+Y   FGRRKSWL+P Q  C  +M++    M + +GE +G  P+V  LTA+F  LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP  CN Y RSEP+D GI++L  F++FWG +   TT+ + +FK E       E L +  TY Q+Y  ++LPS+ S S +LLT +IG  A
Sbjct:   49 DWSSIMLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSIYSERFGRRKSWLIPVQFTCAALMVVGSWFMSDLLGEGEGQKPHVVYLTAFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTIGYFVAYVGFLALNDPATCNSYLRSEPADEGIVSLPGFMRFWGWIMFFTTLGVWIFKHEKSEDEGSERLTIAQTYSQMYSVLRLPSIVSLSVLLLTSKIGFAA 302          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (a transporter 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2A0_PLAHL)

HSP 1 Score: 308 bits (790), Expect = 1.100e-98
Identity = 150/254 (59.06%), Postives = 185/254 (72.83%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D  SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY   FGRRKSWL+P Q +C ++M++    M + +GE +   P+V  LT +F  LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP  CN Y RSEP D G++TL  F+ FWG V   TT+ + LFK E   G   E L +  TY Q+Y  ++LPSV S S +LLT +IG  A
Sbjct:   39 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICALLMVVGSWFMSDLLGEGENQKPHVVYLTCFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTIGYFVAYVGFLALNDPSTCNSYLRSEPKDEGMVTLPGFMSFWGWVMFFTTLGVWLFKHEKPEGDGSERLSIGQTYSQMYSVLRLPSVISLSIMLLTSKIGFAA 292          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (A transporter (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRB2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.400e-98
Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D  SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY   FGRRKSWL+P Q +C  +M++    M + +GE +    +V  LT +F  LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP  CN Y RSEP D G+++L  F+ FWG V   TT+ + LFK E     N E L +  TY Q+Y  ++LPSV S S +LLT +IG  A
Sbjct:   49 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICAALMVVGSWFMSDMLGEGERQKLHVIYLTVFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTVGYFVAYVGFLALNDPATCNSYLRSEPEDEGMVSLPGFMSFWGWVMFFTTLGVWLFKHEKPEDENSERLTIAQTYSQMYSVLRLPSVISLSVMLLTSKIGFAA 302          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3GTK3_PHYRM)

HSP 1 Score: 308 bits (789), Expect = 2.050e-98
Identity = 150/254 (59.06%), Postives = 185/254 (72.83%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D  SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY   FGRRKSWL+P Q +C  +M++    M + +GE +G  P+V  LT +F  LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DPG CN Y RSEP D G+++L  F+ FWG V   TT+ + +FK E       E L +  TY QLY  ++LPSV S S +LLT +IG  A
Sbjct:   49 DWPSIVLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICAALMVVGSWFMSDLLGEGEGQKPHVIYLTVFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTVGYFVAYVGFLALNDPGTCNSYLRSEPEDEGMVSLPGFMSFWGWVMFFTTLGVWIFKHEKPEVEGSERLTIAQTYSQLYSVLRLPSVISLSVMLLTSKIGFAA 302          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAT6_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.200e-97
Identity = 152/251 (60.56%), Postives = 185/251 (73.71%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIG 882
            D  SI LLL+LY LQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDSLY   FGRRKSWL+P Q  C  +M+     + E +GE +G  P+V  LT +F ALYF+MATQDIAVDGWALTMLS +NV  ASTCNT+GQTLGFFIS VGFLAL+DP  CN Y R+ P D GII L  F+ FWG V   TT+ + LFK E +   +D  L + +TY+Q+Y  ++LPSV + S++LLTC+IG
Sbjct:   42 DWPSIALLLLLYMLQGIPMGLSSSIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSLYSRRFGRRKSWLIPVQFACAALMIGGSVFIGELLGEGEGRKPHVVYLTGFFFALYFLMATQDIAVDGWALTMLSEKNVAHASTCNTVGQTLGFFISYVGFLALHDPATCNAYLRATPQDEGIIGLPGFMHFWGWVMFVTTLGVLLFKRE-KRDADDAKLSIRETYQQMYAVLRLPSVLALSAMLLTCKIG 291          
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (A transporter, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX64_PYTIN)

HSP 1 Score: 306 bits (784), Expect = 1.360e-97
Identity = 149/254 (58.66%), Postives = 191/254 (75.20%), Query Frame = 1
Query:  133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
            D SS++LLL+LYTLQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDSLY    GRRKSWL+P QL+C  +M+     + + +GE +G  P+V  LT +F  LYF+MATQDIAVDGWALTMLS  +VG ASTCNT+GQTLG+F++ VGFLAL+DP  CN YFRS P   G+++L+ F+ FWG V L TT+ + +FK E  +  ++E L + +TY+Q+Y  ++LPSV S S VLLT +IG  A
Sbjct:   56 DWSSLLLLLLLYTLQGIPMGLSASIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSLYSRRIGRRKSWLIPVQLVCAALMIGGSFFISDMLGEGEGQKPHVMALTIFFFVLYFMMATQDIAVDGWALTMLSSHHVGHASTCNTVGQTLGYFVAYVGFLALHDPATCNAYFRSVPQPDGMVSLAAFMNFWGWVMLVTTVGVAIFKQERRDR-HEEKLTIFETYRQMYSVMRLPSVISLSVVLLTSKIGFAA 308          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.170e-20495.64protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Hypothetical9.840e-11964.73protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized6.610e-10261.02protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized5.580e-9960.63protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized1.030e-9858.27protein n=1 Tax=Peronospora effusa TaxID=542832 Re... [more]
Acetyl-coenzyme1.100e-9859.06a transporter 1-like n=1 Tax=Plasmopara halstedii ... [more]
Acetyl-coenzyme1.400e-9858.27A transporter (Fragment) n=1 Tax=Phytophthora palm... [more]
Uncharacterized2.050e-9859.06protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3G... [more]
Uncharacterized1.200e-9760.56protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Acetyl-coenzyme1.360e-9758.66A transporter, putative n=2 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9637contigEcto-sp9_F_contig9637:370..3355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score583.6
Seed ortholog evalue5.4e-164
Seed eggNOG ortholog2880.D7FYM4
Preferred nameSLC33A1
KEGG koko:K03372
KEGG TC2.A.1.25
KEGG Pathwayko00604,ko01100,map00604,map01100
GOsGO:0000139,GO:0000295,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0005887,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006862,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0008521,GO:0009719,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015215,GO:0015216,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015605,GO:0015672,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015876,GO:0015916,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0019219,GO:0019222,GO:0022804,GO:0022857,GO:0022890,GO:0023052,GO:0030509,GO:0031090,GO:0031224,GO:0031226,GO:0031323,GO:0031326,GO:0031984,GO:0032501,GO:0032502,GO:0034220,GO:0042175,GO:0042221,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0051252,GO:0051503,GO:0051716,GO:0055085,GO:0060255,GO:0060395,GO:0065007,GO:0070848,GO:0070887,GO:0071077,GO:0071106,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071772,GO:0071773,GO:0071944,GO:0072348,GO:0072530,GO:0080090,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098827,GO:1901264,GO:1901337,GO:1901505,GO:1901679,GO:1901682,GO:1902600,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.acetyl-CoA transmembrane transporter activity
EggNOG OGsCOG0477@1,KOG3574@2759
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative acetyl-coenzyme A transporter
Ec32 orthologEc-sdr_f_000020.1
Exons6
Model size894
Cds size894
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9637.17747.1prot_Ecto-sp9_F_contig9637.17747.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9637 370..3355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931051.8617337-CDS-Ecto-sp9_F_contig9637:369..4501622931051.8617337-CDS-Ecto-sp9_F_contig9637:369..450Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 370..450 -
1692279010.15656-CDS-Ecto-sp9_F_contig9637:369..4501692279010.15656-CDS-Ecto-sp9_F_contig9637:369..450Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 370..450 -
1622931051.9059064-CDS-Ecto-sp9_F_contig9637:848..10081622931051.9059064-CDS-Ecto-sp9_F_contig9637:848..1008Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 849..1008 -
1692279010.1808078-CDS-Ecto-sp9_F_contig9637:848..10081692279010.1808078-CDS-Ecto-sp9_F_contig9637:848..1008Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 849..1008 -
1622931051.9473782-CDS-Ecto-sp9_F_contig9637:1174..13321622931051.9473782-CDS-Ecto-sp9_F_contig9637:1174..1332Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 1175..1332 -
1692279010.1935787-CDS-Ecto-sp9_F_contig9637:1174..13321692279010.1935787-CDS-Ecto-sp9_F_contig9637:1174..1332Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 1175..1332 -
1622931051.9636178-CDS-Ecto-sp9_F_contig9637:1771..19631622931051.9636178-CDS-Ecto-sp9_F_contig9637:1771..1963Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 1772..1963 -
1692279010.2057197-CDS-Ecto-sp9_F_contig9637:1771..19631692279010.2057197-CDS-Ecto-sp9_F_contig9637:1771..1963Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 1772..1963 -
1622931051.9749193-CDS-Ecto-sp9_F_contig9637:2201..22761622931051.9749193-CDS-Ecto-sp9_F_contig9637:2201..2276Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 2202..2276 -
1692279010.2173681-CDS-Ecto-sp9_F_contig9637:2201..22761692279010.2173681-CDS-Ecto-sp9_F_contig9637:2201..2276Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 2202..2276 -
1622931051.9877272-CDS-Ecto-sp9_F_contig9637:3127..33551622931051.9877272-CDS-Ecto-sp9_F_contig9637:3127..3355Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 3128..3355 -
1692279010.2403326-CDS-Ecto-sp9_F_contig9637:3127..33551692279010.2403326-CDS-Ecto-sp9_F_contig9637:3127..3355Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9637 3128..3355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9637.17747.1

>prot_Ecto-sp9_F_contig9637.17747.1 ID=prot_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=298bp
MPGPKSPVERRKETQPILTDVEQVEHNGHIVDRTIETVKGGWRQDLSSII
LLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAP
LVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGEDGGVPYVKT
LTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFIS
QVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLF
KPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVAT
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mRNA from alignment at Ecto-sp9_F_contig9637:370..3355-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9637.17747.1 ID=mRNA_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2986bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9637:370..3355- (Ectocarpus species9 EcSCA_722f female)
ATGCCTGGCCCAAAGTCACCGGTCGAACGGAGGAAAGAGACACAACCGAT TCTAACAGATGTGGAGCAGGTGGAACACAACGGCCACATAGTTGATAGAA CGATCGAGACGGTGAAGGGCGGCTGGAGGCAAGACCTGTCAAGCATCATC TTGCTTCTGGTCCTGTACACTCTCCAAGGGATACCGATGGGCCTCAGCGG GAGCATTCCCTTCTTGCTTGTAGACAAGGTGAAAAAATTAAAGCAATGCC TCACGTTTAGACAGTCTAGTGCGTCCTACGATCCGGTGGAGTTCTCGTCT TGTAGGATGGTAGCCTTGGCGGACGGGAGAGGCACACACCTAGGGAAAAG GGGTATACGCAGTGTGCATTGTTGTGCCTTTACAACTGGTGTCCAACTCT CGGAGGCGTCGGTCGCTTTGCTGTCACGTCTCGTAGCGGCAGCCTCGCTC GGTTGTAGTGTGTCTCCGTAACTGACGTTCTGGCCAGGTGTGTGTAAAAA CACATTGGCTGTGTGTTGACACGCATTCTGTGCCGGATCAGACCCTGAAC ACGGCAACAGTCTCACGCTCGTTGCCGGCTTGAGTCTTGGCCCACAGACA TGTTAACTACACCAACGACAGCTCAGCATGATCACTGAACACCGCTGGCC AGCAGGTACGCAATGCAACCACCTCTCTGTCCGCCTGTTTTTGTAGTTGT GGCCTTCAGGCATGGTGCATCCTTCACGCGAAACCGTACAACAAGCGATC CGCGGTAATCCAATAGACAACGTGCACGTGTCGATCTCCGCCGCCCATGA CATACTCCGTGTGCACTCACCACCAAGGCACACAGTTGACGGCAATAGCA AGCATCTTCCAGCGTGAGCTCGCGAGAGCGTTTCTTGTCTTTGGTGGACG AGTACAGTAGTGCTATTCCATGACTATGACGTTCAGGTCGAGTTTCGTAC GGAGGGGGTGCGAGGGGAGGAGAGCGAAACGTTCAAAAGCAATTCGTCAG TGCAACCTTGAAATAGGGTGTCCCTTGGAGTAGAGGACCTCATTGTGGGC ATATTCGATGCTTTCGCTTTGCACTTCAGGTGTCTTACTCGGAGCAGGCG GTCTTCAGTCTGGTGTCAACACCCTTTAGCCTGAAGTTGCTTTGGGCCCC ACTGGTGAGTACACTGTATGTTCTAGGTACGTTTCTCCGCTAGTTGTCGA CGGACCAACTTAACCATTTTCGACCTACTGTTGTAGAAAGCGCGTTAGCT TAGGTGCTAGCGGCACAAGCAATTACTTGGGTACATAGCTACATGATTCA GAGTTAGCTACGTGTTAGCCTTTACACAAGACGGCACAAGTGCTTCAACC AATCAGTTTATCAATTATTCTATCTGCGGATTGATTGGACAGGTTGACTC GCTGTACTTCCCGTCCTTCGGCCGGCGAAAGTCATGGTTGGTGCCTGCCC AGCTCCTTTGCGGAGTAATGATGCTCTTGGCCCGGAGCGTGATGGATGAG TGGATCGGGGAAGACGGGGGGGTACCGTACGTCAAGACGTTGACGGCTTA CTTTTTAGCTTTATACTTCATCATGGCAACTCAGGTATGCGACGAGTGGT CTCGTTTTATTGTAGGCCGCCCTATCCTGTGCTGACGCCCATAAGCATGA AACAAGCGATACTTTGTTCGCAAGCGTGGCGACCATGAACAAAAAAGGAC TTAATGATATTTGACGGCTTGGCGCGAAATTGTGGCCGCATTTTCACTTC CCATAGACCTTGGGTAATTCCTTGGCTTGTGTCTACAAACTCGAGGTGTC CAGACGAGCAGGAGGGTTGCAGATTGCAAATACCCTGTTGGGTACTTTAG TGCGACTGCGCCGCGAATTTCCGGGACCGAGTTGCTGTGTTTTGTCGGTG TTCACGTGCTGTGACACATGAAAGTGTGCGGCCAGTAGCACGCGCAATTA GCGCACCGATAATGCATGTTGACCATGCCCGACCATGCCCGACCTCTCCT CTACGGATTTTCGTGCGCGTAAGGACATTGCTGTGGATGGATGGGCTCTA ACGATGCTTTCTCGCGAAAATGTGGGGTTCGCATCGACGTGCAACACCAT CGGGCAAACGCTGGGTTTCTTCATTTCTCAAGTGGGCTTCCTTGCTCTAT ATGACCCTGGGGTGTGCAACAAGTACTTTCGGTACGTATTCGCGCGAGCT TCATCTGTCGCGGTTCTGTTCCCCAACCTTCGCACACTGCTCGCGGTAGA CATGAGTTACGATATTCGTGGCCTATTATTCTGCTGATAGTGATGCAAGT CTTAACCTTGTACTGTTGTCGCATTGTTTGCTTTGTTCGTGCGTCAGATC TGAACCATCAGATGTAGGAATCATCACCCTTTCCACCTTCCTACAATTTT GGGGTGCGGTGTTTCTGGCGACAACGATTTGGTTGTGCTTATTCAAGCCC GAGGTCGAAAACGGAGTCAACGACGAGATTTTGGGACTGGTTGACACTTA CAAGCAGGTGTGTGGGGCTGACGGGGGTTGAAGCGAACTGTCTATGCATA GGACTGAATTATCGAGGACACCCTAGCTGGTAGACCTCTGTCTCGCCACT TACTGGTGTCAACCGATGTGTGGTTTTCCTGGTTGTCACATTCTTGTCCA GCTCTCCACACCCCACCGCCCATATGTTAGTACCTCGTAGACGATGTGAT ATTCGGTCATGTATGCAGTGGGGCTCTTCTGTGTGACCACGGGTTGGAGT AAACAGCACTAATGCTGAGAGCGCTGATTTGAAAAAAAAAAAAAAAAAAA AAAAAATGCCAGTTGGGGCCTCATTTATGAACACCCTCAACCTACAGTGA CCATTTATCCGTCCGATGTTGCCGTTGATCTCTGTTTGACGCGACCCGTT GACAGCTGTACAAGTGTGTGCAACTGCCGTCGGTGCGGTCCTTCTCGTCG GTACTTCTCACGTGCCGCATAGGTAAGGTTGCCACA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9637:370..3355-

>mRNA_Ecto-sp9_F_contig9637.17747.1 ID=mRNA_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1788bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9637:370..3355- (Ectocarpus species9 EcSCA_722f female)
ATGCCTGGCCCAAAGTCACCGGTCGAACGGAGGAAAGAGACACAACCGAT
TCTAACAGATGTGGAGCAGGTGGAACACAACGGCCACATAGTTGATAGAA
CGATCGAGACGGTGAAGGGCGGCTGGAGGCAAGACCTGTCAAGCATCATC
TTGCTTCTGGTCCTGTACACTCTCCAAGGGATACCGATGGGCCTCAGCGG
GAGCATTCCCTTCTTGCTTGTAGACAAGATGCCTGGCCCAAAGTCACCGG
TCGAACGGAGGAAAGAGACACAACCGATTCTAACAGATGTGGAGCAGGTG
GAACACAACGGCCACATAGTTGATAGAACGATCGAGACGGTGAAGGGCGG
CTGGAGGCAAGACCTGTCAAGCATCATCTTGCTTCTGGTCCTGTACACTC
TCCAAGGGATACCGATGGGCCTCAGCGGGAGCATTCCCTTCTTGCTTGTA
GACAAGGTGTCTTACTCGGAGCAGGCGGTCTTCAGTCTGGTGTCAACACC
CTTTAGCCTGAAGTTGCTTTGGGCCCCACTGGTGTCTTACTCGGAGCAGG
CGGTCTTCAGTCTGGTGTCAACACCCTTTAGCCTGAAGTTGCTTTGGGCC
CCACTGGTTGACTCGCTGTACTTCCCGTCCTTCGGCCGGCGAAAGTCATG
GTTGGTGCCTGCCCAGCTCCTTTGCGGAGTAATGATGCTCTTGGCCCGGA
GCGTGATGGATGAGTGGATCGGGGAAGACGGGGGGGTACCGTACGTCAAG
ACGTTGACGGCTTACTTTTTAGCTTTATACTTCATCATGGCAACTCAGGT
TGACTCGCTGTACTTCCCGTCCTTCGGCCGGCGAAAGTCATGGTTGGTGC
CTGCCCAGCTCCTTTGCGGAGTAATGATGCTCTTGGCCCGGAGCGTGATG
GATGAGTGGATCGGGGAAGACGGGGGGGTACCGTACGTCAAGACGTTGAC
GGCTTACTTTTTAGCTTTATACTTCATCATGGCAACTCAGGACATTGCTG
TGGATGGATGGGCTCTAACGATGCTTTCTCGCGAAAATGTGGGGTTCGCA
TCGACGTGCAACACCATCGGGCAAACGCTGGGTTTCTTCATTTCTCAAGT
GGGCTTCCTTGCTCTATATGACCCTGGGGTGTGCAACAAGTACTTTCGGA
CATTGCTGTGGATGGATGGGCTCTAACGATGCTTTCTCGCGAAAATGTGG
GGTTCGCATCGACGTGCAACACCATCGGGCAAACGCTGGGTTTCTTCATT
TCTCAAGTGGGCTTCCTTGCTCTATATGACCCTGGGGTGTGCAACAAGTA
CTTTCGATCTGAACCATCAGATGTAGGAATCATCACCCTTTCCACCTTCC
TACAATTTTGGGGTGCGGTGTTTCTGGCGACAACGATTTGGTTGTGCTTA
TTCAAGCCCGAGGTCGAAAACGGAGTCAACGACGAGATTTTGGGACTGGT
TGACACTTACAAGCAGATCTGAACCATCAGATGTAGGAATCATCACCCTT
TCCACCTTCCTACAATTTTGGGGTGCGGTGTTTCTGGCGACAACGATTTG
GTTGTGCTTATTCAAGCCCGAGGTCGAAAACGGAGTCAACGACGAGATTT
TGGGACTGGTTGACACTTACAAGCAGCTGTACAAGTGTGTGCAACTGCCG
TCGGTGCGGTCCTTCTCGTCGGTACTTCTCACGTGCCGCATAGGTAAGGT
TGCCACACTGTACAAGTGTGTGCAACTGCCGTCGGTGCGGTCCTTCTCGT
CGGTACTTCTCACGTGCCGCATAGGTAAGGTTGCCACA
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