mRNA_Ecto-sp9_F_contig9637.17747.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K482_9PHAE) HSP 1 Score: 579 bits (1493), Expect = 1.170e-204 Identity = 285/298 (95.64%), Postives = 289/298 (96.98%), Query Frame = 1
Query: 1 MPGPKSPVERRKETQPILTDVEQVEHNGHIVDRTIETVKGGWRQDLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGEDGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVAT 894
MPGPKSPVERRK TQPILTDVEQ+EHNGHIVDRTIETVKGGWRQDLSSI LLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCG MML ARSVMDEWIGEDGGVP+VKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGI+TLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDE LGLVDTYKQLYKCVQLPSVRSFSSVLLTCR+ T
Sbjct: 18 MPGPKSPVERRKATQPILTDVEQMEHNGHIVDRTIETVKGGWRQDLSSITLLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGGMMLSARSVMDEWIGEDGGVPHVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIVTLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEFLGLVDTYKQLYKCVQLPSVRSFSSVLLTCRMAFAVT 315
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DJ58_HETAK) HSP 1 Score: 360 bits (924), Expect = 9.840e-119 Identity = 167/258 (64.73%), Postives = 209/258 (81.01%), Query Frame = 1
Query: 124 WRQDLSSIILLLVLYTLQGIPMGLSGSIPFLLVDK-VSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGEDGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVAT 894
WR DL SIILLL+LYTLQGIPMGLSGS+PFLL DK VSY+EQA+FSLV+ PFSLKL+WAPLVDS Y P+ GRRKSWLVP QL+CG++ML A V+D+W+G G +P V LT YFL LYF+MATQDIAVDGWALTMLS ENVG+ASTCNTIGQT+G+F++ VGFLAL D GVCNKY RS PS+ G++TL++F+ FW VF+ TT+++ FK E E +E GLV+TYK+ ++C++LP+V+ +L+TC+I AT
Sbjct: 40 WRDDLGSIILLLILYTLQGIPMGLSGSVPFLLQDKEVSYAEQALFSLVTLPFSLKLIWAPLVDSTYLPAVGRRKSWLVPVQLICGLVMLGATMVIDDWVGATGAIPSVPNLTWYFLFLYFLMATQDIAVDGWALTMLSEENVGYASTCNTIGQTIGYFVAHVGFLALQDAGVCNKYLRSVPSETGMVTLASFMNFWAIVFIVTTLYVWFFKAEKEEVGGEETDGLVETYKKAWQCIRLPAVKKLCIILMTCKIAFAAT 297
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Z6_PYTOL) HSP 1 Score: 317 bits (812), Expect = 6.610e-102 Identity = 155/254 (61.02%), Postives = 193/254 (75.98%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SS++LLL+LYTLQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDS+Y PSFGRRKSWL+P Q +C +M+ + E +GE DG P+V LT +F LYF+MATQDIAVDGWALTMLS +NVG ASTCNT+GQTLG+F++ VGFLAL+DP CN YFRS P G+ITL+ F+ FWG V TT+ + +FK E E+ +E L + +TYKQ+Y ++LPSV S S +LLT +IG A
Sbjct: 48 DWSSMLLLLLLYTLQGIPMGLSASIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSIYSPSFGRRKSWLIPVQFICAGLMIGGSFFISELLGEGDGQKPHVIYLTIFFFVLYFMMATQDIAVDGWALTMLSEKNVGHASTCNTVGQTLGYFVAYVGFLALHDPATCNSYFRSTPQPDGMITLAGFMNFWGWVMFVTTVAVGIFKKEKED--TEEQLSIAETYKQMYSVLRLPSVISLSIILLTSKIGFAA 299
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRN8_9STRA) HSP 1 Score: 310 bits (793), Expect = 5.580e-99 Identity = 154/254 (60.63%), Postives = 184/254 (72.44%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY FGRRKSWL+P Q C +M+ M + +GE +G P+V LTA+F LYF+MATQDIAVDGWALTMLS +NVG ASTCNT+GQT+GFF++ VGFLAL DPG CN Y RSEP D G+++L F+ FWG V TT+ + LFK E E L + TY Q+Y ++LPSV S S VLLT +IG A
Sbjct: 52 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYNERFGRRKSWLIPVQFTCAALMVGGSWFMSDLLGEGEGQKPHVLYLTAFFFVLYFMMATQDIAVDGWALTMLSAKNVGHASTCNTVGQTVGFFVAYVGFLALNDPGTCNSYLRSEPDDEGLVSLPGFMSFWGWVMFVTTLGVWLFKHEKPETHGGERLTIAQTYSQMYSVLRLPSVVSLSVVLLTSKIGFAA 305
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFF3_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.030e-98 Identity = 148/254 (58.27%), Postives = 187/254 (73.62%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SSI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDS+Y FGRRKSWL+P Q C +M++ M + +GE +G P+V LTA+F LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP CN Y RSEP+D GI++L F++FWG + TT+ + +FK E E L + TY Q+Y ++LPS+ S S +LLT +IG A
Sbjct: 49 DWSSIMLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSIYSERFGRRKSWLIPVQFTCAALMVVGSWFMSDLLGEGEGQKPHVVYLTAFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTIGYFVAYVGFLALNDPATCNSYLRSEPADEGIVSLPGFMRFWGWIMFFTTLGVWIFKHEKSEDEGSERLTIAQTYSQMYSVLRLPSIVSLSVLLLTSKIGFAA 302
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (a transporter 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2A0_PLAHL) HSP 1 Score: 308 bits (790), Expect = 1.100e-98 Identity = 150/254 (59.06%), Postives = 185/254 (72.83%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY FGRRKSWL+P Q +C ++M++ M + +GE + P+V LT +F LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP CN Y RSEP D G++TL F+ FWG V TT+ + LFK E G E L + TY Q+Y ++LPSV S S +LLT +IG A
Sbjct: 39 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICALLMVVGSWFMSDLLGEGENQKPHVVYLTCFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTIGYFVAYVGFLALNDPSTCNSYLRSEPKDEGMVTLPGFMSFWGWVMFFTTLGVWLFKHEKPEGDGSERLSIGQTYSQMYSVLRLPSVISLSIMLLTSKIGFAA 292
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (A transporter (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRB2_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.400e-98 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY FGRRKSWL+P Q +C +M++ M + +GE + +V LT +F LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DP CN Y RSEP D G+++L F+ FWG V TT+ + LFK E N E L + TY Q+Y ++LPSV S S +LLT +IG A
Sbjct: 49 DWPSILLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICAALMVVGSWFMSDMLGEGERQKLHVIYLTVFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTVGYFVAYVGFLALNDPATCNSYLRSEPEDEGMVSLPGFMSFWGWVMFFTTLGVWLFKHEKPEDENSERLTIAQTYSQMYSVLRLPSVISLSVMLLTSKIGFAA 302
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3GTK3_PHYRM) HSP 1 Score: 308 bits (789), Expect = 2.050e-98 Identity = 150/254 (59.06%), Postives = 185/254 (72.83%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SI+LLL+LYTLQGIPMGLS SIPF+L +KV Y +QA FSLVS PFSLKLLWAP VDSLY FGRRKSWL+P Q +C +M++ M + +GE +G P+V LT +F LYF+MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+G+F++ VGFLAL DPG CN Y RSEP D G+++L F+ FWG V TT+ + +FK E E L + TY QLY ++LPSV S S +LLT +IG A
Sbjct: 49 DWPSIVLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICAALMVVGSWFMSDLLGEGEGQKPHVIYLTVFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTVGYFVAYVGFLALNDPGTCNSYLRSEPEDEGMVSLPGFMSFWGWVMFFTTLGVWIFKHEKPEVEGSERLTIAQTYSQLYSVLRLPSVISLSVMLLTSKIGFAA 302
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAT6_9STRA) HSP 1 Score: 306 bits (783), Expect = 1.200e-97 Identity = 152/251 (60.56%), Postives = 185/251 (73.71%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIG 882
D SI LLL+LY LQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDSLY FGRRKSWL+P Q C +M+ + E +GE +G P+V LT +F ALYF+MATQDIAVDGWALTMLS +NV ASTCNT+GQTLGFFIS VGFLAL+DP CN Y R+ P D GII L F+ FWG V TT+ + LFK E + +D L + +TY+Q+Y ++LPSV + S++LLTC+IG
Sbjct: 42 DWPSIALLLLLYMLQGIPMGLSSSIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSLYSRRFGRRKSWLIPVQFACAALMIGGSVFIGELLGEGEGRKPHVVYLTGFFFALYFLMATQDIAVDGWALTMLSEKNVAHASTCNTVGQTLGFFISYVGFLALHDPATCNAYLRATPQDEGIIGLPGFMHFWGWVMFVTTLGVLLFKRE-KRDADDAKLSIRETYQQMYAVLRLPSVLALSAMLLTCKIG 291
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Match: Acetyl-coenzyme (A transporter, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX64_PYTIN) HSP 1 Score: 306 bits (784), Expect = 1.360e-97 Identity = 149/254 (58.66%), Postives = 191/254 (75.20%), Query Frame = 1
Query: 133 DLSSIILLLVLYTLQGIPMGLSGSIPFLLVDKVSYSEQAVFSLVSTPFSLKLLWAPLVDSLYFPSFGRRKSWLVPAQLLCGVMMLLARSVMDEWIGE-DGGVPYVKTLTAYFLALYFIMATQDIAVDGWALTMLSRENVGFASTCNTIGQTLGFFISQVGFLALYDPGVCNKYFRSEPSDVGIITLSTFLQFWGAVFLATTIWLCLFKPEVENGVNDEILGLVDTYKQLYKCVQLPSVRSFSSVLLTCRIGKVA 891
D SS++LLL+LYTLQGIPMGLS SIPF+L +KV Y++QA FSLVS PFSLKLLWAP VDSLY GRRKSWL+P QL+C +M+ + + +GE +G P+V LT +F LYF+MATQDIAVDGWALTMLS +VG ASTCNT+GQTLG+F++ VGFLAL+DP CN YFRS P G+++L+ F+ FWG V L TT+ + +FK E + ++E L + +TY+Q+Y ++LPSV S S VLLT +IG A
Sbjct: 56 DWSSLLLLLLLYTLQGIPMGLSASIPFILQEKVGYADQATFSLVSWPFSLKLLWAPFVDSLYSRRIGRRKSWLIPVQLVCAALMIGGSFFISDMLGEGEGQKPHVMALTIFFFVLYFMMATQDIAVDGWALTMLSSHHVGHASTCNTVGQTLGYFVAYVGFLALHDPATCNAYFRSVPQPDGMVSLAAFMNFWGWVMLVTTVGVAIFKQERRDR-HEEKLTIFETYRQMYSVMRLPSVISLSVVLLTSKIGFAA 308 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9637.17747.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9637.17747.1 >prot_Ecto-sp9_F_contig9637.17747.1 ID=prot_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=298bp MPGPKSPVERRKETQPILTDVEQVEHNGHIVDRTIETVKGGWRQDLSSIIback to top mRNA from alignment at Ecto-sp9_F_contig9637:370..3355- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9637.17747.1 ID=mRNA_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2986bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9637:370..3355- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9637:370..3355- >mRNA_Ecto-sp9_F_contig9637.17747.1 ID=mRNA_Ecto-sp9_F_contig9637.17747.1|Name=mRNA_Ecto-sp9_F_contig9637.17747.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1788bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9637:370..3355- (Ectocarpus species9 EcSCA_722f female)back to top |