mRNA_Ecto-sp9_F_contig9627.17740.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE) HSP 1 Score: 924 bits (2389), Expect = 0.000e+0 Identity = 519/598 (86.79%), Postives = 529/598 (88.46%), Query Frame = 1
Query: 37 DSFTSSENNVEANGEGATETLANMPLVKPHALQSTAPMTDGRQAGGEAATAATAAALGDSAEGLLRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRSDLENPGRLRRTGSNSSISTLGSTSTASSTWPNDGFVTPARNNIPRGAGGGRYGLGXXXXXXXEGLPPGYKTPGNVSAATPNREMTIPETPSPRSVSSSVHGTPAPPGMRLAQFARVGGGGGDTSLYGLPEMEIGRSTSNVYESNPSGSSWPVGSKGSAPLTAASIAAXXXXXXXXXXXXXXXXXXXXXXXXATASSPTAELDTGGRKSNRSSRTAGASPTTGGAGGAWGDREGGGGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGIADDKV 1830
DSFTSSENNVEANGEG T+TLAN PLVKPHALQSTAPMT G+QAGGEAATAATAA +GDSAEGL RP SSRSDLENPGRLRRTGSNSSISTLGSTSTASSTWPNDGFVTPARNNIPRGAGGGRYGLGXXXXXXXEGLPPGYKTPGN+SAATPNREMTIPETPSPRSVSSSVHGTPAPPGMR+AQF RVGGGGGDTSLYGLPEMEIGRSTSN+YESNPSGSSWPVGSKG AP TAASIAAXXX ATA+SPTAELDTGGR SNRSSRTAGASPTT GAGGAWGDREGGGGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLY +FAQELRAMKGIRH+CVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRE LTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVL+TKEWGAKVADYGLARTSEVMLGAHDRAK XXXXXXXX KVGALRWMAPELLQAS D S DLFTEASDVYSVGVIAWEVLCGGSKLPYDGIADDKV
Sbjct: 649 DSFTSSENNVEANGEGPTDTLANKPLVKPHALQSTAPMTGGQQAGGEAATAATAATVGDSAEGLPRPPTAAAVMAPGAAIPAGTPAAGTAGGDDDDSSRSDLENPGRLRRTGSNSSISTLGSTSTASSTWPNDGFVTPARNNIPRGAGGGRYGLGXXXXXXXEGLPPGYKTPGNLSAATPNREMTIPETPSPRSVSSSVHGTPAPPGMRIAQFLRVGGGGGDTSLYGLPEMEIGRSTSNLYESNPSGSSWPVGSKGGAPPTAASIAAXXXATGSAQPTPGDGANPSPINN-ATATSPTAELDTGGRMSNRSSRTAGASPTTWGAGGAWGDREGGGGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYEAFAQELRAMKGIRHECVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKREGLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLVTKEWGAKVADYGLARTSEVMLGAHDRAKRKSXXXXXXXXPKVGALRWMAPELLQASADRSADLFTEASDVYSVGVIAWEVLCGGSKLPYDGIADDKV 1245
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 194 bits (494), Expect = 5.280e-49 Identity = 98/243 (40.33%), Postives = 149/243 (61.32%), Query Frame = 1
Query: 1087 ELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGI 1815
+L+ LQI K D+ RPFA G SEVYQV H G +AAK +L LGV +++ R++ F +EL + + D V ++YGA+A+P+ELT+V + ++RG +RT+L D ++R+S+TP RH ++ D A GM YLY+ G+QHR+L S N L+T +W K++D+GL++T + + S + G + +MAPELL G V E SD YS GV+ W+V+CG + P+ G+
Sbjct: 754 QLDKLQISKEDVTYASKRPFASGSYSEVYQVIHEGVVKAAKKTNLARLGVGKKDIDRVFERFVKELYILSQMHSDRVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQRQSMTPVARHGLLLDTAEGMAYLYKNGVQHRDLKSANCLVTHDWRVKISDFGLSKTIDAISTGSTSTMSGNF--------RGGTMTYMAPELLPGGAGGDVP--AELSDAYSFGVVVWDVVCGEGRTPWAGV 986
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI) HSP 1 Score: 189 bits (479), Expect = 4.740e-47 Identity = 95/243 (39.09%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 1087 ELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGI 1815
+L LQI K+D+ RPFA G SEVYQV H G +AAK +L LGV +++ R++ F +EL + + + V ++YGA+A+P+ELT+V + ++RG +RT+L D ++R+S+T +RH ++ D A GM YLY G+QHR+L S N L+T +W K++D+GL++T + + S + G + +MAPELL G V E SD YS GV+ W+++CG + P+ G+
Sbjct: 818 QLYKLQISKDDVTYASKRPFASGSYSEVYQVIHEGVVKAAKKTNLARLGVGKKDIDRVFERFVKELYILSQMHSERVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQRQSMTRVVRHGLLLDTAEGMTYLYNNGVQHRDLKSANCLVTHDWRVKISDFGLSKTIDAISTGSSSTMSGSF--------RGGTMTYMAPELLPGGAGGDVP--AELSDAYSFGVVVWDIVCGEGRTPWAGV 1050
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.500e-30 Identity = 82/233 (35.19%), Postives = 128/233 (54.94%), Query Frame = 1
Query: 1090 LEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCG 1788
LEALQ + + P RG + VY+V G+ AAK++ L + ++ R+ +FA+E+ + + V +++G V++ ELT+V + ++RG LR LL + +TP +RH+++ DVA GM YL+ G+ HR+L SHNVLI ++ AK++D+GL+RT+ + + XX G L WM PE AS G+ DVYS G++ WEVL G
Sbjct: 897 LEALQAPPQSVTRLRAAPIGRGAFASVYKVHFRGQECAAKVVSLADM--TPAQIQRVMMNFAREVYILTRLVSPRVVSLHGCVSSVGELTLVMEYMRRGSLRKLLNSLELWAEVTPRMRHQMLSDVAEGMQYLHYNGIYHRDLKSHNVLIGDDFRAKLSDFGLSRTASTI--------TSFSSGRCGGXXXXGTLNWMPPECFDASAAGAD---APKRDVYSYGMVVWEVLAG 1116
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.850e-26 Identity = 62/184 (33.70%), Postives = 103/184 (55.98%), Query Frame = 1
Query: 1234 VVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSV-DLFTEASDVYSVGVIAWEVL 1782
+ E++ R+Y F++E+ + ++ + +Y +T +LT+V ++RG L +L + +TP +RH+++ DVA GM YL+++ + HR+L SHNVL+T +W A + D+G+++T + A AKS G L W APE+ + G FT SDVYS G++ WEVL
Sbjct: 1 MTAEQLQRVYMRFSREVYILSTLQSPRIVPLYACASTTEDLTLVMQYMRRGSLNRVLCSENAWREVTPEMRHRLLCDVAQGMQYLHDRNVYHRDLKSHNVLLTDDWRAVLTDFGMSKTCSAITAA-THAKSTYAG---------GTLAWTAPEVFKPRVGGGHRSNFTFKSDVYSYGIVVWEVL 174
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Uncharacterized (protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTI7_9MYCE) HSP 1 Score: 121 bits (304), Expect = 5.860e-25 Identity = 83/241 (34.44%), Postives = 126/241 (52.28%), Query Frame = 1
Query: 1102 QIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGA-VATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGIAD 1821
+I K +++ FG+ A G S +VYQ T+ GK+ A K+ ++L +E F +E+ M + H+C YGA PS L +V++LVK G L LL++K LT A + I DVA+ M YL+ G+ HR+L S NVLIT++ AKV D+G +R +V +G WMAPE+++ +T++ DVYS G++ WE+ C PY GI++
Sbjct: 248 EIKKEEVE--FGKEIASGASGKVYQGTYQGKDVAIKLYSEYNLCFNVDE-------FNREVTIMTLLDHECFTTFYGANKEDPSNLFLVSELVKSGSLSLLLSNKP--IDLTYAQKLSIAIDVANAMNYLHSLGIIHRDLKSGNVLITEDLRAKVIDFGFSRNKDVS---------------KQMTSNIGTCFWMAPEVIKGQQ------YTDSCDVYSFGIVLWEIYCRSK--PYQGISN 454
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RG80_SELML) HSP 1 Score: 110 bits (274), Expect = 3.010e-22 Identity = 72/223 (32.29%), Postives = 111/223 (49.78%), Query Frame = 1
Query: 1123 KLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRE-SLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCG 1788
+L G FA+G S +Y+ T+ G++ A KI++ +V + F QE+R + ++H V GA P IVT+ K G +R+ L+ +K R L A++ + D+A GM YL+ G HR+L S N+LI + K+AD+G+AR G + G RWMAPE++Q L+T DVYS G++ WE++ G
Sbjct: 126 RLAMGHAFAQGASGRLYRGTYDGEDVAVKILERPKNNAERAQV--MEQQFTQEVRMLAALKHQNVVRFIGACRKPLVWCIVTEYAKGGSVRSFLSKRKSRPVPLKLAVKQAL--DIAQGMQYLHNLGFIHRDLKSDNLLIATDKSIKIADFGVARIEVQTEGM---------------TPETGTYRWMAPEMIQHR------LYTHKVDVYSFGIVLWELITG 323
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9E8M7_ARUDO) HSP 1 Score: 108 bits (270), Expect = 4.470e-22 Identity = 81/232 (34.91%), Postives = 110/232 (47.41%), Query Frame = 1
Query: 1126 LVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQG--LQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGI 1815
LV G +G VY G + A K+ FS E++ +F QE+ MK +RH + GAVA+P L IVT+ + RG L LL +K L P R + DVA GM YL+ + HR+L S N+L+ K W KVAD+GL+R K G +WMAPE+L+ E SDVYS GVI WE++ K+P+D +
Sbjct: 86 LVIGEQVGQGSCGTVYHAQWYGSDVAVKV---FSKQEYSEDMIN---TFRQEVSLMKKLRHPSIILFMGAVASPERLCIVTEFLPRGSLFRLL--QKNTAKLDPRRRVHMAIDVARGMNYLHHCSPPIVHRDLKSSNLLVDKNWTVKVADFGLSRLKLQTFLTTKTGK--------------GTPQWMAPEVLRNEPSD------EKSDVYSYGVILWELVT--QKIPWDNL 287
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Uncharacterized (protein n=5 Tax=Andropogoneae TaxID=147429 RepID=C5Y7W7_SORBI) HSP 1 Score: 111 bits (277), Expect = 7.670e-22 Identity = 84/232 (36.21%), Postives = 114/232 (49.14%), Query Frame = 1
Query: 1126 LVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYLYEQG--LQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGI 1815
LV G +G VY G + A K LFS EE +F QE+ MK +RH + GAVA+P L I+T+ + RG L +LL +K L P R + D+A GM YL+ + HR+L S N+L+ K W KVAD+GL+R + L R KS G +WMAPE+L+ E SDVYS GVI WE++ K+P+D +
Sbjct: 437 LVIGEQVGQGSCGTVYHAQWYGSDVAVK---LFSKQEYSEETID---TFRQEVSLMKKLRHPNIILFMGAVASPERLCIITEFLPRGSLFSLL--QKNTAKLDPRRRVHMAIDIARGMNYLHHCSPPIVHRDLKSSNLLVDKNWTVKVADFGLSR---LKLETFLRTKSGK-----------GTPQWMAPEVLRNEPSD------EKSDVYSYGVILWELVT--QKIPWDNL 638
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Match: Protein (kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W647_9STRA) HSP 1 Score: 108 bits (269), Expect = 8.520e-22 Identity = 74/234 (31.62%), Postives = 123/234 (52.56%), Query Frame = 1
Query: 1123 KLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYASFAQELRAMKGIRHDCVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKRESLTPAIRHKIIKDVASGMGYL--YEQGLQHRNLHSHNVLITKEWGAKVADYGLARTSEVMLGAHDRAKSXXXXXXXXXXXKVGALRWMAPELLQASTDGSVDLFTEASDVYSVGVIAWEVLCGGSKLPYDGIA 1818
+L GR G +V++ +G+ A K++ V + + + A F E+ M +RH + + GA P IV +L + G L +L + KR SLTP +R K + D A GM YL ++Q + HR+L S N+L+ ++ K++D+GLAR AH + + G ++WMAPE+L G++ +TE +DV+S G++ WEV+ G + PY+G++
Sbjct: 117 ELQVGRKIGEGAFGKVFRGKWSGRAVAIKVL------VCQDLRSDIMAEFQSEVEIMSILRHPNICRLLGACMEPPNRAIVVELCQGGSLWNVL--RLKRHSLTPKMRTKFLLDTAKGMSYLHHFKQPILHRDLKSPNLLVDSDYTIKISDFGLARVK-----AHVQTMTG----------NCGTVQWMAPEVL-----GNLK-YTEKADVFSFGIVVWEVMTG--ECPYEGLS 319 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9627.17740.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9627.17740.1 >prot_Ecto-sp9_F_contig9627.17740.1 ID=prot_Ecto-sp9_F_contig9627.17740.1|Name=mRNA_Ecto-sp9_F_contig9627.17740.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=610bp PGGGSGREFGREDSFTSSENNVEANGEGATETLANMPLVKPHALQSTAPMback to top mRNA from alignment at Ecto-sp9_F_contig9627:3..4756+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9627.17740.1 ID=mRNA_Ecto-sp9_F_contig9627.17740.1|Name=mRNA_Ecto-sp9_F_contig9627.17740.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4754bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9627:3..4756+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9627:3..4756+ >mRNA_Ecto-sp9_F_contig9627.17740.1 ID=mRNA_Ecto-sp9_F_contig9627.17740.1|Name=mRNA_Ecto-sp9_F_contig9627.17740.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3660bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9627:3..4756+ (Ectocarpus species9 EcSCA_722f female)back to top |