mRNA_Ecto-sp9_F_contig9620.17738.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 866 bits (2238), Expect = 5.650e-310 Identity = 538/641 (83.93%), Postives = 543/641 (84.71%), Query Frame = 1
Query: 1 MSVPRKVLLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGSGSSRVVRRRHRPRQYTVVGEGGAVAAGDSLSMAVGERKAALGRSSISSRQRRRSACRCHDATAAPTXXXXXXXXXXXXXXXXXXXXXIKGGAASQDFPAXXXXXXXXXXXXXXXXXXXXXXXXXXXTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFALATKPLEGIAASLDKALGGRWSGXXXXXXXXXXXXXXXXXAKGR--------GEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEVRSTF 1899
M VPRK+LLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRG+GSSRVVR RHRPRQYTVV EGGA AAGDSLSM VGER+AALGRSSISSRQRRRSA CHDAT XXXXXXXXXXXXXXXXXXXXX ASQD PA TFRELFRGRLPDWLL RLEQLGFATPTLVQRQALEVILGE KHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEA RLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSH+YVVCPPEQKLAVLRALVKRELGVSASEAA XXXX AGGGGV NT VQADTRGLVFALATKPLEGIAASLDKALGGR S XXXXXXXXXXXXXXXXX G QPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPE+ F
Sbjct: 1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTGSSRVVRCRHRPRQYTVVEEGGAEAAGDSLSMVVGERRAALGRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXX----ASQDSPAPLLDGGNVFSSTPNGAAAADPGPVNGGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDSPSEGQ--AGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVF 635
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: DEAD (box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 664 bits (1713), Expect = 6.280e-234 Identity = 382/459 (83.22%), Postives = 386/459 (84.10%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFALATKPLEGIAASLDKALGGRWSGXXXXXXXXXXXXXXXXX--AKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEVRSTF 1899
TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLL RVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGR+SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEE AARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE+KLAVLR DTRGLVFALATKPLEGIAASLDKALGGR SGXXXXXXXXXXXXXXXXX AKG EQPPQPPLAEFLR+ELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPE+ F
Sbjct: 5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT--------------------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQPPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVF 401
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: DEAD (box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 416 bits (1068), Expect = 2.280e-135 Identity = 265/466 (56.87%), Postives = 311/466 (66.74%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAG-RVTGAAAPVN---RKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFALATKPLEGIAASLDKAL-----GGRWSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEVRSTF 1899
T+REL+ RLP WL+ RLE+LGFA PTLVQ++AL+ IL HDAVLHAQTGSGKTLAFL+PL A +DPSRA+VQGLVVVPTRELGLQVA VAKRLAA T + ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+L+ LV GAVR N V YVVVDEVDACL S RA+L LLAR LSPT A E+E E + ++ G VTGAAA + R++R RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H+YV C P +KLA LRALV+RELG G R LVFA A +PL+ +AA+LD L GG XXXXXXXXXXXXXXXXX PLA+ LRE+LGL RADA++ +R G R+L++TD+AARGLDVPE F
Sbjct: 57 TYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAE-------VPQLPGGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG----------------------------------------------GDGXXXXXXAPRALVFAQANRPLDQMAAALDADLRKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVF 467
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.240e-85 Identity = 161/310 (51.94%), Postives = 213/310 (68.71%), Query Frame = 1
Query: 529 TFRELFRG-----RLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAA--GTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEG---------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKREL 1407
+F EL+ LP WL R + G+ TPTLVQR++L+ IL D V+ AQTGSGKTL+FLLPLL+++D SR+A+Q ++VVPTRELGLQ++ VA+RLAA G + + KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ LT++V+ G +R NAV +VVVDEVDACLL+ G + LHELL+R LSPT+ + D + + +A L A + G++ V+ DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV E +PP LSH YVVC E K LR ++KRE+
Sbjct: 90 SFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAIL--TGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGD--SASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREV 394
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA) HSP 1 Score: 276 bits (705), Expect = 2.240e-81 Identity = 184/479 (38.41%), Postives = 245/479 (51.15%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGED---EEEAARLAEVGAG------RVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFAL--ATKPLEGIAAS--LDKALGGRWSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEVRSTF 1899
+FR+L+ LPDWLL RLE+LGF PTL Q AL + E D VLHAQTGSGKTLA+LLPLLA++DPSRAAVQ L+ VP+RELGLQVA V K+L T+ +E KI VMS LEGS +RQRAWAWA+PPH+VI P L L+ +GA++ + V+YVVVDE D C+L EG + LHELL+RSL+P H E +D E+ L E G GA + ++ + RQTVF SAT+PQ HF+ Q++W P +V++ + +P LSH + V P E+K LRAL+KRE EA GLVFA + KP E + A L+ L G+ E L + +R++ + RA + +R G+ ++L+S + RGLDVP+ F
Sbjct: 57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE--DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGLEDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEA----------------------------------------------------GLVFAADWSPKPAEEVEAEKLLNPFLDPLGDLAKLLSADLAKSASQEGDGDGKCEGAAPRDLVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIF 479
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 273 bits (699), Expect = 7.930e-81 Identity = 188/469 (40.09%), Postives = 243/469 (51.81%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVIL-GEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-----TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFALATKPLEGIAASL--DKALGGRWSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEF---LREELGLNARADAMSLFREGK---TRLLVSTDMAARGLDVPEV 1887
T + ++ +LP WLL R + LG+ PT +Q AL+V+L E K D V+ A+TGSGKTL +LLP LA +DP+R+ VQ ++VVPTRELGLQVA VAKRL A + KI +MSVL+GS N+RQRAWAWA+PP +VIG PE L+++V G + R N++ VVVDEVDACLL+ + LHELL++ LS T D+DE ED +GA T R+L RQT+ SAT+PQH HFI+QCVQ +WT TEPV V + E + PP L H Y+VC PE KLA L+ ++ L LVFA +PLE +A +L + G W AK + P P+ LR + L RA AM F R+L STD+AARGLDV V
Sbjct: 59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDT--------MGALSST----RPKRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLLSSPVPFKV----------------------------------------------------LVFAEEQRPLEEMALALAWEAEHGVYWQ---------------ESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANV 444
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSE4_9STRA) HSP 1 Score: 267 bits (683), Expect = 2.250e-79 Identity = 152/315 (48.25%), Postives = 207/315 (65.71%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAA---------------GTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRD-RQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVV-CPPEQKLAVLRALV 1395
TF EL+ +P WLL R E+ G+ +PT +Q +AL IL ++K DA++ A+TGSGKTL++LLP +A VD SR+AVQ L+VVPTRELGLQV VAKRLAA G + + KI VM+VL+GS N+RQRAWAWA+PPHIVIG P+ L +V G + R N+V YVVVDEVDACLL+ + ++LHELL++ LSPT D +E +A+ G ++ +R L + RQT+FASAT+PQH HF++QC+Q QWTL +PVH+ + + E + P L H Y+V ++KLA LR ++
Sbjct: 130 TFSELYESFIPSWLLKRCEECGWESPTRIQEKALNAILRDKK-DAIVQAETGSGKTLSYLLPAMAAVDSSRSAVQVLIVVPTRELGLQVGRVAKRLAAASYNQDPDIGQDPDVGNAGKPQKKIMVMNVLQGSQNRRQRAWAWAEPPHIVIGTPQELCDMVRYGGIKRYNSVKYVVVDEVDACLLNNAGSMTAKLSSSTLHELLSKYLSPTFDDGSSANEENGIREVAKSGTQQIQ------SRPLSETRQTIFASATIPQHRHFLKQCIQNQWTLRDPVHISLRSGEQLLPMSLDHAYMVSASSDKKLAALRRII 437
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 266 bits (681), Expect = 6.720e-78 Identity = 155/312 (49.68%), Postives = 207/312 (66.35%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGT-SSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLS-EGTRAS--------------LHELLARSLSPTHADEDEGEDEE--EAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKREL 1407
TF E F +P WL +R ++ G+ PTL+Q +A++ IL + +D ++ AQTGSGKTL +LLPLL+R+DP+R+++QG++VVPTRELG+QVA VA+RLAAG+ S +KI VMSVL+GS NKRQRAWA +DPPH+VIG P L +V ++ +AV +VVVDEVDACLL+ +GT S LHELL+R LSPT +E EDEE + L E G R+ DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V E +PP L H YVVC EQK+ L ++ +++
Sbjct: 58 TFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLSLVEGGGSRIVSHGT-------DRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQI 357
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 264 bits (675), Expect = 3.860e-76 Identity = 151/314 (48.09%), Postives = 203/314 (64.65%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRE-----SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPCLSHYYVVC-PPEQKLAVLRALVKRELGVSASE 1425
+F + LP WL+ + + G+ P+ +Q +AL+ IL E + DAV+ A+TGSGKTLA+LLP LA +D SRAAVQ L+VVPTRELGLQVA VAKRLAA ++ +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L +V G + R N+V ++VVDEVDACLL+ ++LHELL++ LSPT+ D E ++ R + T + P++ + RQT+FASAT+PQH HF++QC Q QWTL EP HV + ++ +P L H Y VC +QKLA LR LV + S E
Sbjct: 133 SFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFERR-DAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTAT-STRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKSVIE 441
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Match: RNA (helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 263 bits (672), Expect = 8.370e-76 Identity = 194/508 (38.19%), Postives = 249/508 (49.02%), Query Frame = 1
Query: 529 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG---------TSSGRES----------------------------KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPT--------HADEDEGEDEEEAARLAEVGA---------GRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE-QKLAVLRALVKRELGVSASEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGVTNTGVQADTRGLVFALATKPLEGIAASLDKALGGRWSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEV 1887
TF +L+ RLP WLL R+E LG+ PT VQ++AL IL E D V+H+QTG+GKTLAF+LPLLA +D ++ AVQ LVVVP+RELGLQVA VAK+LA+G GR++ KI +MS+LEGS N+RQ+AW A+PPH+VIGNP SL +LV G +R + V VVVDEVDACL S T L LL + LSP+ A G ++E L GA GRV AP KL RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V E MPP L H Y+V P + K A L A ++RE +A ++F + E +AA L ++ G A G E + + + L + RA M FR G++ LV+TD AARGLDVP V
Sbjct: 117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAIL--EGEDVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC----------------------------------------------------VIFTADDREAEKMAAILARSGG---------------------LAAGGQEPRGESSVVQALVGGEHIARRAKVMDAFRAGESWGLVTTDFAARGLDVPRV 547 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9620.17738.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9620.17738.1 >prot_Ecto-sp9_F_contig9620.17738.1 ID=prot_Ecto-sp9_F_contig9620.17738.1|Name=mRNA_Ecto-sp9_F_contig9620.17738.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=633bp MSVPRKVLLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGSback to top mRNA from alignment at Ecto-sp9_F_contig9620:1444..5130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9620.17738.1 ID=mRNA_Ecto-sp9_F_contig9620.17738.1|Name=mRNA_Ecto-sp9_F_contig9620.17738.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3687bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9620:1444..5130+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9620:1444..5130+ >mRNA_Ecto-sp9_F_contig9620.17738.1 ID=mRNA_Ecto-sp9_F_contig9620.17738.1|Name=mRNA_Ecto-sp9_F_contig9620.17738.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3798bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9620:1444..5130+ (Ectocarpus species9 EcSCA_722f female)back to top |