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Homology
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI) HSP 1 Score: 569 bits (1466), Expect = 8.500e-194 Identity = 277/283 (97.88%), Postives = 282/283 (99.65%), Query Frame = 2
Query: 2 IKLHFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 850
IKLHFGDYYIDGPIFLKSGVFIDG+W+DEYPTFCWLVLY+GDSNTVTGEDAMVVVDGATGAELYGLAFVRKE+PTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNG ATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNF+VAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE
Sbjct: 210 IKLHFGDYYIDGPIFLKSGVFIDGEWQDEYPTFCWLVLYEGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEEPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFVVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 492
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 6.760e-184 Identity = 275/283 (97.17%), Postives = 278/283 (98.23%), Query Frame = 2
Query: 2 IKLHFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 850
IKL FGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDI+FSEMGLFSGRNG ATFTDSRNMSAFIFYNGD LETGNYMELTRVDDVHFRALPNMSGVL DTCNDIVFEGVD+FAIP+AYFSPPVAG DQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE
Sbjct: 710 IKLQFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIRFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVHFRALPNMSGVLIDTCNDIVFEGVDEFAIPSAYFSPPVAGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 992
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 223 bits (569), Expect = 8.210e-58 Identity = 122/287 (42.51%), Postives = 178/287 (62.02%), Query Frame = 2
Query: 2 IKLHFGDYYIDGPIFLKSGVFIDG-DWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEG--VDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFIVAAGAEPR-ILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 850
I + G Y++DGP+FLKSGV + G D+ P+ +LVL+ N EDA++V+DG TG E+ + + TGDI PGT+GN L VR SQD++ +E+ R GAA F DS+N+S + +G E ETGN+ME+ VDD HF +P ++G+ + N++V +G + + +PT F PP G DQ A+VV+TG SSGIVFQ+ + AG + +L+ESTEPLTLDN++ Y AE GDCI++VP + +D +VQ+ + +L+K G CWV +
Sbjct: 708 ISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLH----NHTRLEDAVIVIDGVTGGEVDSVYIEHQTPMTGDITPGTLGNLCLEVRGSQDLKLAEIDCHQARTGAARFVDSKNISVSVIRDG-EYETGNFMEVDGVDDFHFEGIPEVAGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGG-DQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCIIDVPPESGDDLIVQLNSYA------------ILSKDGDCWVWD 976
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: F5/8 (type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 1.150e-8 Identity = 71/302 (23.51%), Postives = 127/302 (42.05%), Query Frame = 2
Query: 17 GDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGD----IVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDI------VFE---------GVDDFAIPTAYFSPPVAGSDQTANV-------VVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWV 844
G +Y+DG IF+KSGVF+DG + ++ P F ++L +G + T DAMVV+DG + A + DP VPG +G+T L+V S +I + + A DS +S ++ G Y EL + A +G++ D+C+ I ++E G ++F G N+ V+ S+ + F + V + +P ++V + ++ +N + + E C+++ + + T +ID L G+C+V
Sbjct: 881 GSWYVDGNIFMKSGVFLDGSFSEDSPYFTGIILEEGAAGK-TDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPG-LGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMIS---------IDAGEYEELYSPWSL---ASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVSDSSTVSFNN-LGLSLVEADACVIQADDPS---------------TVTIDADEDELTLDGSCYV 1152
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 3.890e-5 Identity = 75/296 (25.34%), Postives = 124/296 (41.89%), Query Frame = 2
Query: 2 IKLHFGDYYIDGPIFLKSGVFIDGDWK-DEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPT----GDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPV-AGSD---------QTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWV 844
+ L FG+Y++DG IF+KSGVF+ G ++ D+ P + L +G T DAM+V+DG + A + L DP VPG +G+T +++ +SQ+I ++ T+ D F +GD + V ++ N+ +D + + T PP+ GS Q V+V G SS I FQ V + +P + + + ++ N Y+ A G CI++ + + T +ID L GTC+V
Sbjct: 712 VVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNIDIFLEEGAPGN-TDVDAMIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPG-LGSTGVSIVDSQNITCAD-----------TWVD--------FCDGDAMV------------VRSSSVVNIDAGYYDEYKATGWRVCTSWTPTTLPSKPPIYVGSQGQVGSLEGQQPIEVIVEG-SSLINFQEMWVRSVNDPVMTISDSTAVSFTNDGSYSVAS-GTCIIQTDDPS---------------TVTIDPDEDELILEGTCYV 957
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Match: F5/8 (type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 7.080e-5 Identity = 72/306 (23.53%), Postives = 124/306 (40.52%), Query Frame = 2
Query: 2 IKLHFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGT--VGNTNLAVRNSQDIQFSEMGLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDI----------VFEGVDDFAIPTAYFSPPVA---GSDQTANV----------VVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWV 844
+ L +G YY++G IF++SGV + G + D+ P +VL +G T DA+VV+DG A + + DP D + +G+ L+V NSQ+I + + A DS ++ ++ G Y E + L +G++ DT + I G+ F +A GS+ NV V+ G SS + FQ+ V + +P + + + ++ N Y++ G C ++ + + T +ID L GTC+V
Sbjct: 884 VDLSWGAYYVNGNIFMQSGVLLLGSFGDDDPHTTDIVLEEGAEGN-TDIDAIVVMDGIRDAWIEKVWIQGNYDPETDGISAVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVN---------IDAGRYDEEYLPWTI---GLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTITDSTTVSFTNG-GYSNVPSGTCTIQTDDPS---------------TVTIDADEDELVLEGTCYV 1160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig962.17737.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 8.500e-194 | 97.88 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 6.760e-184 | 97.17 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 8.210e-58 | 42.51 | protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6... | [more] |
| F5/8 | 1.150e-8 | 23.51 | type C domain-containing protein n=3 Tax=Ectocarpu... | [more] |
| Uncharacterized | 3.890e-5 | 25.34 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| F5/8 | 7.080e-5 | 23.53 | type C domain-containing protein n=2 Tax=Ectocarpu... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Galactose-binding domain-like |
| Ec32 ortholog | Ec-21_004900.1 |
| Exons | 7 |
| Model size | 2364 |
| Cds size | 699 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622931049.4366755-UTR-Ecto-sp9_F_contig962:20004..21515 | 1622931049.4366755-UTR-Ecto-sp9_F_contig962:20004..21515 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig962 20005..21515 - |
| 1692279008.9804614-UTR-Ecto-sp9_F_contig962:20004..21515 | 1692279008.9804614-UTR-Ecto-sp9_F_contig962:20004..21515 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig962 20005..21515 - |
| 1622931049.602672-UTR-Ecto-sp9_F_contig962:27451..27605 | 1622931049.602672-UTR-Ecto-sp9_F_contig962:27451..27605 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig962 27452..27605 - |
| 1692279009.0702848-UTR-Ecto-sp9_F_contig962:27451..27605 | 1692279009.0702848-UTR-Ecto-sp9_F_contig962:27451..27605 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig962 27452..27605 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622931049.455447-CDS-Ecto-sp9_F_contig962:21515..21632 | 1622931049.455447-CDS-Ecto-sp9_F_contig962:21515..21632 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 21516..21632 - |
| 1692279008.9904227-CDS-Ecto-sp9_F_contig962:21515..21632 | 1692279008.9904227-CDS-Ecto-sp9_F_contig962:21515..21632 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 21516..21632 - |
| 1622931049.4715924-CDS-Ecto-sp9_F_contig962:22389..22490 | 1622931049.4715924-CDS-Ecto-sp9_F_contig962:22389..22490 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 22390..22490 - |
| 1692279009.0012004-CDS-Ecto-sp9_F_contig962:22389..22490 | 1692279009.0012004-CDS-Ecto-sp9_F_contig962:22389..22490 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 22390..22490 - |
| 1622931049.4849775-CDS-Ecto-sp9_F_contig962:22902..23086 | 1622931049.4849775-CDS-Ecto-sp9_F_contig962:22902..23086 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 22903..23086 - |
| 1692279009.0106955-CDS-Ecto-sp9_F_contig962:22902..23086 | 1692279009.0106955-CDS-Ecto-sp9_F_contig962:22902..23086 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 22903..23086 - |
| 1622931049.509314-CDS-Ecto-sp9_F_contig962:24055..24146 | 1622931049.509314-CDS-Ecto-sp9_F_contig962:24055..24146 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 24056..24146 - |
| 1692279009.0208962-CDS-Ecto-sp9_F_contig962:24055..24146 | 1692279009.0208962-CDS-Ecto-sp9_F_contig962:24055..24146 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 24056..24146 - |
| 1622931049.5284336-CDS-Ecto-sp9_F_contig962:24844..24921 | 1622931049.5284336-CDS-Ecto-sp9_F_contig962:24844..24921 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 24845..24921 - |
| 1692279009.031491-CDS-Ecto-sp9_F_contig962:24844..24921 | 1692279009.031491-CDS-Ecto-sp9_F_contig962:24844..24921 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 24845..24921 - |
| 1622931049.5639598-CDS-Ecto-sp9_F_contig962:25511..25607 | 1622931049.5639598-CDS-Ecto-sp9_F_contig962:25511..25607 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 25512..25607 - |
| 1692279009.0427139-CDS-Ecto-sp9_F_contig962:25511..25607 | 1692279009.0427139-CDS-Ecto-sp9_F_contig962:25511..25607 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 25512..25607 - |
| 1622931049.5813982-CDS-Ecto-sp9_F_contig962:27418..27451 | 1622931049.5813982-CDS-Ecto-sp9_F_contig962:27418..27451 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 27419..27451 - |
| 1692279009.056904-CDS-Ecto-sp9_F_contig962:27418..27451 | 1692279009.056904-CDS-Ecto-sp9_F_contig962:27418..27451 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig962 27419..27451 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig962.17737.1 >prot_Ecto-sp9_F_contig962.17737.1 ID=prot_Ecto-sp9_F_contig962.17737.1|Name=mRNA_Ecto-sp9_F_contig962.17737.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=233bp
MVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIQFSEM
GLFSGRNGAATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPN
MSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIV
FQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDF
VVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE* back to topmRNA from alignment at Ecto-sp9_F_contig962:20005..27605- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig962.17737.1 ID=mRNA_Ecto-sp9_F_contig962.17737.1|Name=mRNA_Ecto-sp9_F_contig962.17737.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7601bp|location=Sequence derived from alignment at Ecto-sp9_F_contig962:20005..27605- (Ectocarpus species9 EcSCA_722f female)
GATTAAGCTACACTTCGGCGACTACTACATAGACGGGCCGATCTTCTTGA
AGAGCGGGGTGTTCATCGACGGCGACTGGAAGGACGAGTACCCCACGTTT
TGCTGGCTGGTGCTCTACGACGGGGACAGCAACACCGTTACGGGCGAGGA
CGCCATGGTTGTTGTGGATGGCGCCACAGGCGCGGAGGTACGTTGGCGTT
GCGTGGGTGTCGTATGCTTACAAGTACAGCAGTGGTGGTCCGGATATGCC
GTACCGCGGTCCCGAGTAGTGCGGGTCCCGGTACACCGCGGTAAAAATCG
CTCGATTGTCACGGGATTTGGCTACAATACTAAAAATCTATAATATTCCC
CCCAACACTCAAGGGTGCGGTGTCCCGATATACCGCGGTTGCTTTTGCTT
GTCGCTACACCGCGGCACGGTATATCGGAACCACCGGTGTACACACAAGT
ATAGAGGTTCTTCGTGGTGAGAATCTTCATTTCGCTGTTGGGAGGAAGCA
TGTGTGCCTTTGTACCGACTACAGTACACTCACCGTTTTCTTTGTGCCGA
TGGCCTGTGCACCTGAGCCCATGGAACGAAATCGCGTGTCTCTGACCTTA
CGAATCGACTACATACCCCTCTGCAGCGGAAACTGTCCCCGCTCCATCCA
CGAAGCCCCTCCTGTCAAGCCAATAGCAGCCGGAGCCCGCCACGAAAGAT
AGTAGGACAAATACAATGTGCCTGTTGATTCATGGTGGGGCGTCTTTGCG
AGCCACCCCTTGCTACGCGCTGGCGTGTGCCACCGGCGGCGACAGGGGCG
GCGTCATCATGCGGTGATGGAGCCGCGAATGATGGACGATTCGCTGCTGT
TTTCGGTGCTAAACACGCAACAACAACCATACAGTATGTGAACGATTCGA
GGCGAACAAGAAGAGCTTTCCGTTTACAGCTGCTGCGGCTTTGCTATATG
GGGTCGCGCCCTGTCCTATAAGACTGATTGGTGTGTTTCCCTCCTCGGCA
CGGATCAAGTTTGTTCTTCAGCGTTAGACTTGGTGGCGAGGCCTCATGCG
CCGGCAAGAGGACCTTGCATGCAAGCACGCCCTATCCCGCCATCGCTGAG
AGCTGCTGAGAGCTCTCTCTGCGCATGGGTTGTGTGTGTGTACTCATAGC
CGTGCATGCCGTAGTCGTTAGACCAATGACCTCGCGTCCCTACAAAGCCG
GGACGGAGCACGCCGGCTTTTCACCGGACCAGGCTCTCACATCACCAAGC
GCGAAGCGCCGTGAGGTATTCGGCGAGGCTTTTCCGACAGTACATGCAAA
GTCCCGTATTTTGATTGCCTCCTGGGTCGACAGCGTTCCCGAATACCTCC
GACCGACCATCGGCCTGACGCCGAGCGGGTCGAGAGTCACCCAACCCTAA
TTGATGCCACCTTGTCCCCCTTTCGGAATTTCTTCCGAGCACGCACGCGG
AAAGAAAGATCAACCCGCGAAGCGAAGAAATTCGGTGATAAATTTATTCA
CTGGTCTCCTTTTGAGTTTTTTCTTTTCCCTCTCGGGTGAAGGCATTCGT
TCTTGGAGGACAAAAGGCGAAAGAATGCCTTCGTTCGCCTTGTGCGTGTA
GCCCGCCCGCTGCAGGTTCTCTGTGCAGAAGACGGATGATTCCGAAGCAT
GTTCGTTGGAAAAACAGCCAGTCGGCCGGGTAAATAAATCTTGGGTCGAA
TAGGACCCCGTCCCCCTTTCTCGTTTCGGACCCGCCCTCCCTAACCTTGG
GCCGCAACCCCCCCCCCCTCCGTCCCACCGGCGCGATAGTCTTGTAGCCA
AAATTACCTCCCGCGTCTGGGCAGTCGCGCAGATGGTACTTTTCCCTCGT
TTTGGAAAAGAAACAAACCGACTGCCGCTCCTTTCGCATTCCGTCTGTGT
TGGCAACGTAATTTCGAGACCGACCCACCCTTGGCCAAGGAGTTTTTCCG
TTTGTCATTGTTGTCTTCCCTCTGTGTTGTTGCTATCCCATGCGGCAGCT
TTACGGTTTGGCGTTCGTCCGCAAGGAGGACCCTACGGGGGACATCGTGC
CCGGAACGGTCGGAAACACCAACTTGGCTGTCAGGAACTCGCAGGTGATC
GATTGATACGTCGAAAATGGCGATACAGTAAGTAGGCATTGCTGGCTTCG
TCCGGAAAAACAGGTAATGTATTTCTTAACGAATGGTACATATTTCTCGT
GCCTACGGGACGGGATCGGGCCTGTGTTAAAACCCCGGCGCAATCGAAAC
CGACTGGGGTCAGCAAGAAAACGGAGTCCAGGAATGTCTCGAACGCGTCT
ACAGCAGGAGTGCAAACTCCTGAACATCAGCGGCAGCAAGTAGACTACCG
GATGCGAGCGGCGCTGCTCAACCCAATAGCATCATGCTTGGTACCGTAGC
AGATACGTAGGCAAGTCCCGGTTGTTTTTTCGCCACATTGTGCTCCATAC
GGGGATCAAGGTAGCAGCTAAACGGGAAGCCCGGGATCGAGTACGAATGG
AGCACTTGTGCAAACTCTTTCAAATTCATGGCAGATAACTGAAAGATTGT
TTATACGAAGGGAAGCAAACTCTTTCAAATCCGTGGGAGACAACAGAAGA
TTTTTGTGTTTTTCTTCGTTCTTCGTTTAACGCTGTTAACCTGCTTTGTT
TCTTCCTACCATGCTTGGTTTCTGCCTCATGTAGGACATCCAATTCTCAG
AAATGGGGCTCTTCAGTGGCCGAAACGGCGCCGCCACTTTCACGGATTCC
AGGAACATGAGGTGGGAAGTTTTTCACCTTTGGGTGAGCCCAAAGTCTAT
CTCATGAGTTTTTGACCTGTGCGCTTTGTGTTGAGGTGTCTAGCTTGTCC
GATGACGTTGCTGGTGCTGTTGTGTAGTGTGGTTGCTGTTCATTTTTGTT
TTCCTTGTTGTTGGTGGGAGGTTGTGGCGTTGCCATTGCTGTTGTTGTCT
CCAAGTAGCTTGCCATTCGACACCAAGTCGCAGCGACGCGCAATCGATCC
GCACGAGGGGGGGAAATCCCACACCAAAAACGAACACTCCCGTCGTCGTA
CTTGGCGTACACTGCTTGCTGCCTTCTTTCACGGACGGCACAGTAGTACA
AGTAGATGTATTGTCGTAGCAACCGTTCCGATGTGCCGTGATTTCGCCCT
TCCACCTTGTTTTTCCTCTCGCCGAAACGCCTCACATAGCGCTCGCGATT
AATAAACTAAGGAAGACTCAGATTTCGGCGGTAGATTAGAAAAATGTCTA
AGAAACACACCTCAGCCGTGGATCCAACATTAACCTCTAACCCATACTCG
ACGGAGGTGACGAAATATCGAGCTTCGACTCCAAATTGACGTCTCTCAAA
CGCCAGCGGGGCTTACTGTACGTGTGTTAGAAGCGAAAAGGCTGACACCA
TAGACTATGGCAACGGCCTTATGCTACCCGTGTGATCGCATCTCTTTCCT
TTCCCACAGCGCTTTCATTTTCTACAATGGCGATGAACTCGAGACCGGCA
ACTACATGGAGCTCACCCGTGTGGACGATGTCCATTTCAGGGCCTTGCCG
GTATATATCTGTTTGCTGTTTGCTCTGCACGTATTCTGGTTTGCGTGTAT
GCTGCAATATATATATATTTTGTATATAACCTCTGCGATGCATTCTGCTT
TGTATATACTGTGCGATGCGTCCCGTGTTGTATGCAATGTTTTGTACATT
TTTCGAAGCCAAAATTGAACATTGAATGAAGCGCGTCGGCCTTCCATGTT
GGAAAGAGTTTGGTGGTGCTAGCGGTGAACTTATTCGCGACTGTAGCGTG
ATCGGCGTTACGATACACAGGTGGGTATATACGCGCCATCACTTTGAGAA
ATTGACGGTTGAATAAGTGAGTCGCCAAGTTCTGAATGCAAGAACTTGAC
CATAAGAGTAGGTACTCCGTGAGGAATCCAACACAACAAACCTATACAAT
CGATGTTGGGCTATCCCACACGGAAAAAATGACAACTCGGGCAAAATATG
TAGGAGGTTCCGAAGTGCGAGCGCGTTCTGTTTGTGAGTATTCCCAATGT
ATACCTCGAGCTTGTGCCCAGGAACATTCACGGTTTCGTCAGCCTCCCCG
ACAGCCTCTCTCTTTGTGTGTGTTTGTCCATGCTTGTCTTGCATGCTCGA
TTTGCCCGTTGCTGTAGCCAAGGAGATAGGCGCCATCCTTCGTTAGAAAA
ACAGAACTCTTGATTGATTCGACTCGTCTCGAAAAACCGATCTGATTCCC
CCCCCCCGTGGTTGTCAAACGGCGTACGGTATCTGCCTCGAGATCCGATC
CATGAACCCATCACCAGCCCATGAGCCGAGTTATTGTGGCCATTCAAACT
ACCACCAGTCGCTCGCTTCCAGAAATTCGATGTTCACCCCCTCCGACAAG
CGCAGGCATGAAGTCGATGTATGGCCGACCGCACCACCAAAGCACCAACT
ACGACAACAGCGACCTTCCACGGCCACATGTCTTATTTCCTGTTGGCTAA
ATTACAACCGTTGTTGCAGAACATGTCCGGAGTGCTCTTCGACACGTGCA
ACGACATAGTCTTCGAGGGCGTCGACGATTTTGCGATCCCCACCGCGTAT
TTCAGCCCCCCGGTCGCCGGGAGCGACCAGACGGCGAACGTCGTGGTCAC
CGGCGACTCCTCCGGCATCGTTTTCCAGAACTTCATCGTGGCCGCCGGCG
CTGGTGCGTTGCAGCTACACCTCGCGGCTTCCTACATACCCGCTGTCTTT
CGAGTTGTAGGATGCTTCACGAACGTGTTTTGCTGATTTTGTGAGACCGC
CGTTTTTGTTGTTGTAAGTCTTATTCACAAAAATTCGTGTCGGCGTCTTG
TTGGAGTATTAGGTTTGGGGTGAGCGTTCGTAGCGTTTGGCGACGTCAAT
ACGCACGTGTGACTGGCGGAGCACATTCGAAACATGTTGTTGCTTGGTGG
GGCGTTTGCTACGTGGACTAAGGGAACGACCGCAGAGAGGCGTAGTGAGA
TGGCTCGCAGGTCATCACCATCAACCGTCGTTCGTTGCCATTACTGCCGG
TGCTGCTGCCAACACCGACCGCTGCGACTCGTTATTTTTCTGTTTCGTGT
TTTCCACGCTCAAAGAACCGCGTATCCTGGTGGAATCGACGGAGCCCCTC
ACCCTAGACAACGTCATCAGGTACACTGACGCCGAGATCGGAGACTGCAT
CGTGGAGGTCCCAGAGGTGGGTTGGTTTGCCGTCCCCAGGGCATGTTGAC
AACCAAGCAATTGTTTTTTCTTCATCCAATCGAGTCACGTTGTTCTTGAT
AATGCGTAAGCAAAGCTTTAAAAAAGAAACGCGGTGATTCATCCGAACAG
AGTTTTGCAATCGAGTATCATGCTGGCAACGTTTTCCGTGGGAAGCTGTT
GAAACGATAAAGTAGTGAATAGCGAACATCCTTGGAACTGGGTATCGGTG
GATTGTGTGCAACTACTTGTAGCATATCCGAGTGTTTCAAGGACGAGTAG
CTCCAACGGTCTCGATGGTTCAGAGGCGACAAGCTTCTTTGTGCTTTTTG
GAGTAGTTTGTGCGCACATGAACCGTACGGATCTTCAAGTATTCGGACTT
AGAAGTATCCGCCACCACCCAACCAAGACCGGAAAGTGGGCGTTTGTGAG
GCCGATATCGAGAGGGTTTTTCTCTTCTTTTGAATCCCACGCGTTGCCGT
GCATTCTCTCCGTTGGTGAGCTGCGTGCCTCCTCTGACGAAACCTGTCGT
CAGAACAGCAATAATACCCACGAACCAGCGTGTGACCAAGCGTGTGCGGT
GAAGTATACCCTCTACGGTTCCTCTCTTTTTGTCCTGATACGTGGTAGCC
GTTCCTAGCTGCAGATGACAGGCTGGGGGGCACGCGACTGGCGTATGTCC
CTGTTCTTGGAATCTAACACTTGTGACGACACGCTGGTTCCTCCCCTTTT
CTCGCGATTCCAAACCAAATCAGGGAACGGATGAGGATTTTGTCGTGCAG
GTCAGGACCAACCCTTTTTCCGACACTTCCAGTATCGACACCATCAATCA
GCTCTTGGCGAAGTCGGGCACCTGCTGGGTGCTTGAATAGGTCTCATTTA
TTATGGGTTATTCGCGTAAATGCCAAATTGTGTTTTCTGGATGACTGATT
GTGTGTGTAGTTTGAACATGCCCCCAGGCTTGTTGTCAGGCTGCTGCGTG
CTTCGTTTAGCTGCTGCCCGCAGGTCCAAGCACTAGCAAAACTGTGTGTG
GCGTTTTATCCTGTCCCTTCCGGTCGTCATTTGTTGCATCAACGTACGCA
TGATGCACAGCAGTAGATAGTTTCCCCACTTGCGTGCGTTGGTGCATACG
CATGTACGCTTCACGTGTTTTCCGCTTGCAGCTCAGATGCTCAGAAAACG
ACTGAAAAACGCGAAGTAAACAGTGTCCAGACAGGAAGAAGAGCATCCGC
TACCCGCGGCATCATTCGTGACCAATTGTAGTACAATTGAACGTGTAGGT
CTAGCCATAAGAGGAGGTTAACGGTATTTAACAGGGTCAGCCCGGATTTC
CATATCGGCCGACATCGAAAGACACGGGTGGTCAGAGGTGCAGGTTGTGG
CAAGTGGAATACCATGTAAAACCTAAAGAGGTTAGGTTGGGAAGACGGGG
TTTGAGCTAAAAACGTTTATTCTGTCGTTGCTACAAGCCCGCCCAGTTGG
TTTTATCAGTTTCACTTTCGGCGATGGTGGGGTCAGCTGCGCACACACGA
TGACCTGCCGCCCTTTTAGGCATGTGACGGGCTACCCGTGTAGCTACACG
GAGGGGTTTGGGAGCCTGACTAGCTCAGCGACGCCCCTCTACTGTACTTT
TGGGTGTATAATCTACTCTGTAGTGCACATGCACGAGTTTGTTGCCAGCT
AGGTTGTTGCTGGGGTGCTAGGTTGTTGCTGGGGTGGGTCCTTTGCCCAG
TAAAGATCTGATGGCATGGTGATATTTCACACGTCTGGAGAAAGGGATTG
TACGATTTTGGTCGGTGGGGGTTTGTTGTGCGTGCACACAGCTCTGGGTG
CACCACGCGCTAAGCACCAAAACGTATAGCTAACTTGGCACGTCTGCGTA
AAACAACTTCACCAACATCGCGCGTGCATCTTTATTGCTTGGGATATAAA
GATAGAAAAGGAAGGCGCATCTTCACTGACGTCAAAGCACTTGCGATAGC
AAAGCAGAAGGTAGCTCAGAACTGCGAGCGTCAAGGGACAAGTATTCGTA
TGCGGTCAGTAGCCGAAAATGCAAGCACTTCAGTTGCTGAAGCTTGCTCT
GCACGTTTAGTAGTTGTCGTGTGTCAGCGTCAGTACAAGCCCTTTTGCCT
ACGAATGTCAGAGCCCTCTGTCGGTACTCGGCGAGTTCGAGGGTATCGTG
TCGCAGCTCTCTTTGCCAGCAACAGCTTACCATTGCCGAATTCGGACCCC
GTGCGATTGATTGACGTAGCTGGATTTGTCTGGTGCCTTCATTTCGAGGA
TAGAGCAAGTGCTGCGTAAGCATCCCCGCCCTATCCTCTATCTCTGCATT
CTGCAATCTCCTCTATTTTCAAGGTTTTGTTGGCATCATCCTTGCGGGGG
C back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig962:20005..27605- >mRNA_Ecto-sp9_F_contig962.17737.1 ID=mRNA_Ecto-sp9_F_contig962.17737.1|Name=mRNA_Ecto-sp9_F_contig962.17737.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1398bp|location=Sequence derived from alignment at Ecto-sp9_F_contig962:20005..27605- (Ectocarpus species9 EcSCA_722f female)
ATGGTTGTTGTGGATGGCGCCACAGGCGCGGAGATGGTTGTTGTGGATGG
CGCCACAGGCGCGGAGCTTTACGGTTTGGCGTTCGTCCGCAAGGAGGACC
CTACGGGGGACATCGTGCCCGGAACGGTCGGAAACACCAACTTGGCTGTC
AGGAACTCGCAGCTTTACGGTTTGGCGTTCGTCCGCAAGGAGGACCCTAC
GGGGGACATCGTGCCCGGAACGGTCGGAAACACCAACTTGGCTGTCAGGA
ACTCGCAGGACATCCAATTCTCAGAAATGGGGCTCTTCAGTGGCCGAAAC
GGCGCCGCCACTTTCACGGATTCCAGGAACATGAGGACATCCAATTCTCA
GAAATGGGGCTCTTCAGTGGCCGAAACGGCGCCGCCACTTTCACGGATTC
CAGGAACATGAGCGCTTTCATTTTCTACAATGGCGATGAACTCGAGACCG
GCAACTACATGGAGCTCACCCGTGTGGACGATGTCCATTTCAGGGCCTTG
CCGCGCTTTCATTTTCTACAATGGCGATGAACTCGAGACCGGCAACTACA
TGGAGCTCACCCGTGTGGACGATGTCCATTTCAGGGCCTTGCCGAACATG
TCCGGAGTGCTCTTCGACACGTGCAACGACATAGTCTTCGAGGGCGTCGA
CGATTTTGCGATCCCCACCGCGTATTTCAGCCCCCCGGTCGCCGGGAGCG
ACCAGACGGCGAACGTCGTGGTCACCGGCGACTCCTCCGGCATCGTTTTC
CAGAACTTCATCGTGGCCGCCGGCGCTGAACATGTCCGGAGTGCTCTTCG
ACACGTGCAACGACATAGTCTTCGAGGGCGTCGACGATTTTGCGATCCCC
ACCGCGTATTTCAGCCCCCCGGTCGCCGGGAGCGACCAGACGGCGAACGT
CGTGGTCACCGGCGACTCCTCCGGCATCGTTTTCCAGAACTTCATCGTGG
CCGCCGGCGCTGAACCGCGTATCCTGGTGGAATCGACGGAGCCCCTCACC
CTAGACAACGTCATCAGGTACACTGACGCCGAGATCGGAGACTGCATCGT
GGAGGTCCCAGAGAACCGCGTATCCTGGTGGAATCGACGGAGCCCCTCAC
CCTAGACAACGTCATCAGGTACACTGACGCCGAGATCGGAGACTGCATCG
TGGAGGTCCCAGAGGGAACGGATGAGGATTTTGTCGTGCAGGTCAGGACC
AACCCTTTTTCCGACACTTCCAGTATCGACACCATCAATCAGCTCTTGGC
GAAGTCGGGCACCTGCTGGGTGCTTGAATAGGGAACGGATGAGGATTTTG
TCGTGCAGGTCAGGACCAACCCTTTTTCCGACACTTCCAGTATCGACACC
ATCAATCAGCTCTTGGCGAAGTCGGGCACCTGCTGGGTGCTTGAATAG back to top
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