mRNA_Ecto-sp9_F_contig9507.17646.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9507.17646.1
Unique NamemRNA_Ecto-sp9_F_contig9507.17646.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW5_ECTSI)

HSP 1 Score: 741 bits (1913), Expect = 8.720e-261
Identity = 505/661 (76.40%), Postives = 525/661 (79.43%), Query Frame = 1
Query:    1 MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAPAPVVAGPTPRRYQHIRHGASSSSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PPPSPPVPLPATTAVARDAHRPTVSTTAHHSHRXXXXXXXXXXXXPTSATNXXXXXXXXXXXXTQRGHVVRHTNLPPYSGRALAPTYHQPSPTPSPAAAPRARTXXXXPAAQTRYXXXXXXXXXWSATSAALEADPSRMHNSSALWAAAAEIDHARSRRPPSSSPYATAVAPTAPHRGGPSTPTTAXXXXXXXXXXXXXXXXXXXX--AFVTAMGEGPTSSPWVTPTREPGVSEREKQLEREVQRLAVQLAAAKVGG 1974
            MEAAVAAMERELAAAAAACE S      AKHAGAL RAEAS A+AVHRKQVK+MQALSTAPAHDP LPVA+GKTVT+ AAA+SGA+ PR PAATTAGFQLQEGDFPQLPSL GKTASPGRRSR PPELITVGYVT A+ RERAGDAPASDT A              AAGVEPPPLR  RMTDSEKA+LIEQQQAELRGWHERDF+D  AEAAAGGDGAGGVTAPPTA EVHAAAER VQRAQAVE+EAR AKWVARVQQYKKHN GV LEEAVHRVWESYVNSFYLYHP TTPAPP +P AWY+GAIAASTTSPRHTWAQLEAASP   PP  T          VVAGP PRRYQHIRHGAS+SSSP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPPSPPVP PATTAVAR+ HR            XXXXXXXXXXX P  ATNXXXXXXXX    TQRGH++RHTNLPPYS R LA  Y QP PTPSPAAAPRART    PAAQTRY         WSATSAALEADPSRMHNSSALWAAAAEID  RSRR        +A APTAPH GGPS PTT XXXXXXXX              AFV AMGEGP SSPWV PTREPGVSERE++LEREVQRL VQLAAA+VGG
Sbjct:    1 MEAAVAAMERELAAAAAACEASXXXXXXAKHAGALLRAEASAAMAVHRKQVKHMQALSTAPAHDPPLPVAEGKTVTNTAAAASGANFPRTPAATTAGFQLQEGDFPQLPSLPGKTASPGRRSRAPPELITVGYVTPADARERAGDAPASDTPAAAATDIAGDTATAAAAGVEPPPLRAHRMTDSEKARLIEQQQAELRGWHERDFDDITAEAAAGGDGAGGVTAPPTAVEVHAAAEREVQRAQAVEVEARGAKWVARVQQYKKHNTGVLLEEAVHRVWESYVNSFYLYHPGTTPAPPGEPLAWYLGAIAASTTSPRHTWAQLEAASPEPPPPARTXXXXXXXXXXVVAGPAPRRYQHIRHGASTSSSPQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSPPVPRPATTAVARNGHRXXXXXXXXXXXXXXXXXXXXXXXSPNPATNXXXXXXXXATANTQRGHIIRHTNLPPYSDRPLATAYQQPRPTPSPAAAPRARTTTP-PAAQTRYHIRHTNVPSWSATSAALEADPSRMHNSSALWAAAAEIDARRSRRQ-------SAAAPTAPHSGGPSEPTTXXXXXXXXXVAAPSRGPVPEPSSAFVNAMGEGPASSPWVPPTREPGVSERERELEREVQRLVVQLAAAEVGG 653          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ5_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 9.700e-164
Identity = 388/559 (69.41%), Postives = 405/559 (72.45%), Query Frame = 1
Query:    1 MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAPAPVVAGPTPRRYQHIRHGASSSSS-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSPPVPLPATTAVARDAHRPTVSTTAHHSHRXXXXXXXXXXXX------------PTSATNXXXXXXXXXXXXTQRGHVVRHTNLPPYSGRALAPTYHQPSPTPSPAAAPRARTXXXXPAAQTRYXXXXXXXXXWSATSAALEADPSRMHNSS 1638
            M AAVAAME         CE STASA+EAK  GAL RAEASTALAV RKQVKY QAL  APA    LPVA+G TV  A A +SGA+SP VPAA TAGFQLQEGDFPQLP +KGKTASPGRRSR P EL+TVGYVTSAE RERAG APA DTAA       XXXXXXX  GV PPPLR  RMTDSEKAQLI QQQ ELRGWHERDFED AA AAA GDGAGGVTAPPTA EVH AAERAVQRAQAVE+EAR AKWV RVQQYKKHNAGV LEEAVHRVWESYV SFYLYHPDT PAPPSDPPAWY+GA+AAS TSPRH WAQLEAASPG                  VA P PRRYQH+RH ASSSSS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPPSPP+PL ATT VA DA RPTVSTT +H HRXXXXXXXXXXXX            P  A+             TQRGH++RH NLPP S RA A                    XXXX       XXXXXXXX W ATSAALEADPS +H+SS
Sbjct:  183 MAAAVAAMEXXXXXXXXXCEASTASAKEAKQDGALLRAEASTALAVQRKQVKYTQALPIAPAPANTLPVAEGNTVPAAPATASGANSPCVPAAATAGFQLQEGDFPQLPQVKGKTASPGRRSRTPLELVTVGYVTSAEARERAGGAPALDTAAAATADTAXXXXXXXXXGVVPPPLRAFRMTDSEKAQLIAQQQEELRGWHERDFEDRAAAAAAEGDGAGGVTAPPTAREVHEAAERAVQRAQAVEVEARGAKWVVRVQQYKKHNAGVTLEEAVHRVWESYVTSFYLYHPDTAPAPPSDPPAWYLGAVAASATSPRHPWAQLEAASPGPPXXXXXXXXXXXXXXXXVASPGPRRYQHLRHRASSSSSLQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPPSPPLPLLATTTVALDARRPTVSTTPNHGHRXXXXXXXXXXXXXXXXXXXXXXXXPNPASTHHGHLPTAAPDNTQRGHIIRHHNLPPCSDRAPAXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSWPATSAALEADPSLVHDSS 740          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL90_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 1.300e-157
Identity = 390/669 (58.30%), Postives = 416/669 (62.18%), Query Frame = 1
Query:   55 CEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAH--------DPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDT----AAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAPAPVVAGPTPRRYQHIRHGASSSSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PPPSPPVPLPATTAVARDAHRPTVSTTAHHSHRXXXXXXXXXXXX------------PTSATNXXXXXXXXXXXXTQRGHVVRHTNLPPYSGRALAPTYHQPSPTPSPAAAPRARTXXXXPAAQTRYXXXXXXXXXWSATSAALEADPSRMHNSSALWAAAAEIDHARSRRPPSSSPYATA-----VAPTAPHRGGPSTPTTAXXXXXXXXXXXXXXXXXXXXAFVTAMGEGPTSSPWVTPTREPGVSEREKQLEREVQRLAVQLAAAKVG 1971
            CE STASAEEAK  GAL RAEASTALAV RKQVKYM ALS APA          P L +               A+SPRVPAA TA FQLQE DFPQLP +KGKTASPGRRSR PPELITVGYVTSAE RER G APA DT     A XXXXXXXXXXX   AG+ PPPLR +R                                        G TA PTA EV AAAERAVQRAQAVE EAR AKWVARVQQYKKHN GV LEEAVHRVWESYV  FYLYHPDT PAPPSDPP+WY+GA+AAS TSPRH WA +EAASPG  PPE             VA P PRRYQH+RHGASSSSSP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPPSPP+PL ATT VA DA RPTVST  +H H XXXXXXXXXXXX            P  A+             T+RGH++RH NLPP                                 +Q RY         W ATSAALEADPSR+ +SSALWAAAAEID  RSRR  +SSP   A     +A  AP RG    P++A                     FVTAMGEGP SSPWVT TR+PGVSERE+QLEREVQRLA QLAAA+VG
Sbjct:  134 CEASTASAEEAKLDGALLRAEASTALAVQRKQVKYMWALSIAPAQWWPRGTQCRPPLLLHR-------------ANSPRVPAAATACFQLQESDFPQLPQVKGKTASPGRRSRTPPELITVGYVTSAEARERGGGAPALDTPVATTAGXXXXXXXXXXXTATAGMVPPPLRALR----------------------------------------GGTAAPTAREVPAAAERAVQRAQAVEAEARDAKWVARVQQYKKHNTGVTLEEAVHRVWESYVTCFYLYHPDTAPAPPSDPPSWYLGAVAASATSPRHPWAHIEAASPGPPPPERXXXXXXXXXXXXVASPAPRRYQHLRHGASSSSSPQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSPPLPLLATTTVALDARRPTVSTIPNHGHXXXXXXXXXXXXXXXXXXXXXXXXXPDPASTHHGHLPTAAPDNTRRGHIIRHHNLPP---------------------------------SQPRYHVRHTNIPSWPATSAALEADPSRVQDSSALWAAAAEIDATRSRRHSASSPTTAAPASAPLAVAAPSRGPAPEPSSA---------------------FVTAMGEGPASSPWVTSTRDPGVSEREQQLEREVQRLAEQLAAAEVG 695          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K916_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 1.150e-148
Identity = 258/335 (77.01%), Postives = 272/335 (81.19%), Query Frame = 1
Query:    1 MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGT 1005
            M AAVA MERELAAAAAACE STASAEEAK  G   RAE STALAV RKQVKY Q LST PA    LPVA+G TV  A A +SGA+SP VPAA TAGFQLQEGDFPQLP +KGKTASPGR+SR PPELITVGYVTSA  RERAG APA DT A       XXXXX   AGV PPPLR +RMTDSE AQLIEQQQ +L+GWHERDFED AA  AAGGDGAGGVTAPPT  +VHAAAERAVQRAQAVE++AR AKWV RVQQYKKHNAGV LEE VHRVWESYVNSFYLYHPDT PAPPS+PP WY+GA+AAS TSPRH WAQLE ASP   PP GT
Sbjct:    1 MAAAVAVMERELAAAAAACEASTASAEEAKQDGVFLRAEVSTALAVQRKQVKYTQVLSTTPAPAHTLPVANGNTVPAAPATASGANSPHVPAAATAGFQLQEGDFPQLPQVKGKTASPGRQSRTPPELITVGYVTSAGARERAGSAPALDTPAAATADTTXXXXXA-TAGVAPPPLRALRMTDSENAQLIEQQQDKLQGWHERDFEDRAAATAAGGDGAGGVTAPPTTRDVHAAAERAVQRAQAVEVKARGAKWVTRVQQYKKHNAGVTLEETVHRVWESYVNSFYLYHPDTAPAPPSNPPTWYLGAVAASATSPRHPWAQLEEASPTPLPPRGT 334          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: CCHC-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU3_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 4.260e-147
Identity = 263/343 (76.68%), Postives = 276/343 (80.47%), Query Frame = 1
Query:    1 MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAP 1029
            M AAVAAME         CE STASAEEAK  GAL RAEASTALAVHRKQVKYMQALS+APA    LPVA+G TV  A A +SGA+SPRV AA TAGFQLQEGDFPQLP +KGKTASPGRRSR PPELITVGYVTSA+ RERAG APA DT A              A GV PPPLR +RMTDSEKAQLI QQQ ELRGWHERDFED AA AAA GDGAGGV APPTA EVHAAAERAVQRAQAVE+EAR AKWVARVQQY+KHNAGV LEEAVHRVWESYV SFYLYHPDT PAPPSDPPAWY+G +AAS TSPRH WA +EAASPG  PPE TAA +PPAP
Sbjct:  183 MTAAVAAMEXXXXXXXXXCEASTASAEEAKQDGALLRAEASTALAVHRKQVKYMQALSSAPAPAHTLPVAEGNTVPAAPATASGANSPRVTAAATAGFQLQEGDFPQLPQVKGKTASPGRRSRTPPELITVGYVTSAKARERAGGAPALDTPAVATADAAADTAAAAAVGVVPPPLRALRMTDSEKAQLIAQQQEELRGWHERDFEDRAAAAAAEGDGAGGVMAPPTAREVHAAAERAVQRAQAVEVEARGAKWVARVQQYRKHNAGVTLEEAVHRVWESYVTSFYLYHPDTAPAPPSDPPAWYLGVVAASATSPRHPWAHIEAASPGPPPPERTAASQPPAP 525          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: CCHC-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU5_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 8.790e-124
Identity = 298/559 (53.31%), Postives = 324/559 (57.96%), Query Frame = 1
Query:  160 MQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDPPAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAP----------------------APVVAGPTPRRYQHIRHGASSSSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSPPVPLPATTAVARDAHRPTVSTTAHH------------SHRXXXXXXXXXXXXPTSATNXXXXXXXXXXXXTQRGHVVRHTNLPPYSGRALAPTYHQPSPTPSPAAAPRARTXXXXPAAQTRYXXXXXXXXXWSATSAALEADPSRMHNSSALWAAAAEIDHARSRRPPSSSPYATAVAPTAP 1734
            MQALS+APA    LP A+G TV  A A +SGA+SPRV AA TAGFQLQ+GDFPQLP +KGKTASPGRRS  PPELITVGYVTSAE RERAG APA DT A              A GV PPPLR +RMTDSEKAQL+ QQQ ELRGWHERDFED AA A A GDGAGGV APPTA                              ++Y+KHNAGV L+EAVHRVWESYV SFYLYHPDT PAPPSDPPAWY+GA+AAS TSPRH WA +EAASPG  PPE TA                               V A  + RRYQH RHG                                          PP SPP+PL ATT VA DA  PTVSTT +H            +HRXXXXXXXXXXXXP  A+             TQRGH++RH NLPP S RA A                    XXXX       XXXXXXXX W ATSAALEADPSR+H+SSA WAAAAEID  RSRRP SSSP  TA + +AP
Sbjct:    1 MQALSSAPAPAQTLPAAEGNTVPAAPATASGANSPRVTAAVTAGFQLQKGDFPQLPQMKGKTASPGRRSPTPPELITVGYVTSAEARERAGGAPAFDTPAVATADAAA------AVGVVPPPLRALRMTDSEKAQLLAQQQEELRGWHERDFEDRAAAATAEGDGAGGVMAPPTA------------------------------RKYRKHNAGVTLDEAVHRVWESYVTSFYLYHPDTAPAPPSDPPAWYLGAVAASATSPRHPWAHIEAASPGPPPPEMTAXXXXXXXXXXXXXXXXXRRNSXXXXXGHSTAVAAATSHRRYQHTRHG------------------------------------------PPRSPPLPLLATTTVALDARCPTVSTTPYHGRRATAVAPTNTTHRXXXXXXXXXXXXPNPASTHHGHLPTAAPDNTQRGHIIRHHNLPPCSDRAPAXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSWPATSAALEADPSRVHDSSAQWAAAAEIDATRSRRP-SSSPPTTAASASAP 479          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL44_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 2.490e-100
Identity = 177/220 (80.45%), Postives = 189/220 (85.91%), Query Frame = 1
Query:  100 ALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGWHERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEARSAK 759
            AL RAEASTALAVHRKQVK++QALSTAPAHDPALPVA+GKTV+DAAAA+SG +SPR PAATTAGF+LQ+GDFPQLPSLKG+TASPGRRSR PP LITVGYVT AE  ERAGD PASDT A              AAGVEPPPL  +RMTDSEKAQLI+QQQAE RGWHERD ED AAEAAAGGDGAGGVTAPPTA EVHAAAERAVQRAQAVE+EAR AK
Sbjct:   14 ALLRAEASTALAVHRKQVKHLQALSTAPAHDPALPVAEGKTVSDAAAAASGGNSPRAPAATTAGFELQKGDFPQLPSLKGETASPGRRSRTPPALITVGYVTPAEAGERAGDTPASDTPAAPTADTVAAAETASAAGVEPPPLHALRMTDSEKAQLIKQQQAEQRGWHERDAEDLAAEAAAGGDGAGGVTAPPTAREVHAAAERAVQRAQAVEVEARDAK 233          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ56_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 1.570e-59
Identity = 145/200 (72.50%), Postives = 153/200 (76.50%), Query Frame = 1
Query:    1 MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDT-AAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRG 597
            M AAVAAME         CE STASAEEAK  GAL RAEASTA AVHRKQVKYMQALS+APA    LP A+G  V  A A +SGA+SPRV AA TAGFQLQEGDFPQLP +KGKTASPGRRSR PPELITVGYVTSA+ RERAG APA DT AA     XXXXXXXXX  GV PPPLR + M DSEKAQL+ QQQ ELRG
Sbjct:  183 MAAAVAAMEXXXXXXXXXCEASTASAEEAKQGGALLRAEASTAPAVHRKQVKYMQALSSAPAPAHTLPAAEGNIVPAAPATASGANSPRVTAAATAGFQLQEGDFPQLPQVKGKTASPGRRSRTPPELITVGYVTSAKARERAGGAPALDTPAAATADAXXXXXXXXXXVGVVPPPLRALPMADSEKAQLLAQQQEELRG 382          
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B3_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.750e-49
Identity = 116/161 (72.05%), Postives = 122/161 (75.78%), Query Frame = 1
Query:   67 TASAEEAKHAGALQRAEASTALAVHRKQVKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQLQEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASDTAAXXXXXXXXXXXXXXAAGVEPPPLRVIRMTD 549
            TASAEEAK  GAL RAEASTAL V RKQVKY Q LST PA    LPVA+G TV  A   +SGA+SP VPAA TAGFQLQEGDFPQLP +KGKTASPGR+SR PPELITVGYVTSA  RERAG APA DT A       XXXXX   AGV PPPLR +RMTD
Sbjct:  193 TASAEEAKQDGALLRAEASTALVVQRKQVKYTQVLSTTPAPAHTLPVANGNTVPAAPGTTSGANSPHVPAAATAGFQLQEGDFPQLPQVKGKTASPGRQSRTPPELITVGYVTSAGARERAGSAPALDTPAAATADTTXXXXXA-TAGVAPPPLRALRMTD 352          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9507.17646.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Uncharacterized8.720e-26176.40protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.700e-16469.41protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.300e-15758.30protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized1.150e-14877.01protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
CCHC-type4.260e-14776.68domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
CCHC-type8.790e-12453.31domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized2.490e-10080.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.570e-5972.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.750e-4972.05protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9507contigEcto-sp9_F_contig9507:662..2635 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-23_004230.1
Exons1
Model size1974
Cds size1974
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931036.2622895-CDS-Ecto-sp9_F_contig9507:661..26351622931036.2622895-CDS-Ecto-sp9_F_contig9507:661..2635Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9507 662..2635 +
1692279002.857677-CDS-Ecto-sp9_F_contig9507:661..26351692279002.857677-CDS-Ecto-sp9_F_contig9507:661..2635Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9507 662..2635 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9507.17646.1prot_Ecto-sp9_F_contig9507.17646.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9507 662..2635 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9507.17646.1

>prot_Ecto-sp9_F_contig9507.17646.1 ID=prot_Ecto-sp9_F_contig9507.17646.1|Name=mRNA_Ecto-sp9_F_contig9507.17646.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=658bp
MEAAVAAMERELAAAAAACEESTASAEEAKHAGALQRAEASTALAVHRKQ
VKYMQALSTAPAHDPALPVADGKTVTDAAAASSGADSPRVPAATTAGFQL
QEGDFPQLPSLKGKTASPGRRSRVPPELITVGYVTSAEERERAGDAPASD
TAAAAATAGATATAGAAAAGVEPPPLRVIRMTDSEKAQLIEQQQAELRGW
HERDFEDGAAEAAAGGDGAGGVTAPPTAGEVHAAAERAVQRAQAVEIEAR
SAKWVARVQQYKKHNAGVPLEEAVHRVWESYVNSFYLYHPDTTPAPPSDP
PAWYIGAIAASTTSPRHTWAQLEAASPGSSPPEGTAAPRPPAPAPVVAGP
TPRRYQHIRHGASSSSSPQGSPPVAAAAAVPPGHSTAVAAATPHRRYQHI
RHGPPPSPPVPLPATTAVARDAHRPTVSTTAHHSHRATAAASTNSNHRPT
SATNHHGHRSTAAPATTQRGHVVRHTNLPPYSGRALAPTYHQPSPTPSPA
AAPRARTTTTPPAAQTRYHIRHTNVPSWSATSAALEADPSRMHNSSALWA
AAAEIDHARSRRPPSSSPYATAVAPTAPHRGGPSTPTTATSTRAPVAVAA
TSREPEPEPAFVTAMGEGPTSSPWVTPTREPGVSEREKQLEREVQRLAVQ
LAAAKVGG
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mRNA from alignment at Ecto-sp9_F_contig9507:662..2635+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9507.17646.1 ID=mRNA_Ecto-sp9_F_contig9507.17646.1|Name=mRNA_Ecto-sp9_F_contig9507.17646.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1974bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9507:662..2635+ (Ectocarpus species9 EcSCA_722f female)
ATGGAGGCTGCTGTGGCAGCCATGGAACGGGAGCTTGCCGCGGCGGCCGC GGCCTGTGAGGAGTCCACGGCTTCAGCGGAGGAGGCGAAGCACGCCGGGG CTCTCCAGAGGGCGGAGGCGAGCACCGCGCTGGCTGTTCACCGCAAGCAA GTCAAGTACATGCAAGCGCTCTCCACCGCGCCCGCGCACGACCCTGCCCT GCCGGTGGCCGACGGGAAAACAGTGACGGACGCCGCCGCGGCGTCATCGG GGGCCGACTCCCCCCGCGTGCCCGCTGCCACCACCGCCGGGTTCCAGCTT CAGGAGGGCGATTTCCCGCAGCTGCCATCGCTGAAGGGGAAGACCGCCTC GCCGGGGCGCCGGTCGCGCGTGCCGCCGGAACTCATCACCGTGGGGTACG TGACTTCGGCGGAGGAGAGGGAGCGGGCGGGCGACGCGCCTGCTTCGGAC ACAGCGGCGGCGGCCGCCACCGCCGGCGCTACCGCCACCGCCGGCGCTGC TGCTGCCGGGGTGGAGCCACCGCCGCTACGCGTGATCCGTATGACCGACT CGGAAAAGGCGCAACTGATCGAACAGCAGCAGGCGGAACTGCGGGGGTGG CACGAGCGTGACTTTGAGGACGGAGCGGCGGAGGCAGCGGCTGGAGGAGA TGGTGCGGGGGGGGTAACGGCGCCGCCCACCGCCGGGGAGGTGCACGCCG CGGCTGAGAGGGCCGTCCAGCGTGCCCAAGCGGTGGAGATAGAGGCACGC AGCGCGAAGTGGGTCGCCCGTGTGCAGCAATACAAGAAGCACAACGCGGG GGTCCCGTTGGAGGAAGCGGTCCACCGGGTGTGGGAGTCATACGTCAACA GCTTCTACCTGTACCACCCCGACACGACCCCCGCCCCGCCCAGCGACCCA CCCGCGTGGTACATCGGGGCGATAGCGGCTTCGACAACATCGCCACGGCA CACATGGGCTCAGCTCGAGGCGGCGTCGCCGGGATCGTCGCCGCCGGAGG GGACAGCGGCACCGCGGCCCCCGGCACCGGCCCCCGTAGTCGCCGGCCCC ACACCACGGCGTTATCAGCACATACGCCACGGCGCCTCGTCCTCGTCATC GCCGCAGGGGTCCCCCCCGGTCGCCGCCGCCGCCGCCGTTCCACCCGGCC ACAGCACCGCCGTCGCCGCCGCAACACCCCACCGGCGATACCAGCACATC CGCCACGGTCCGCCGCCCTCACCGCCGGTGCCCCTGCCGGCGACCACCGC TGTAGCACGCGACGCCCATCGCCCCACCGTCAGCACCACCGCCCACCACA GCCACCGCGCCACGGCCGCTGCATCCACCAACAGCAACCACCGTCCCACC TCCGCCACCAACCATCACGGTCACCGTTCCACCGCCGCCCCCGCTACCAC ACAACGCGGCCACGTCGTCCGCCACACCAACCTGCCGCCCTACTCCGGTC GAGCCCTCGCCCCCACCTACCACCAGCCGTCGCCGACGCCGTCGCCGGCG GCCGCGCCGCGCGCCCGCACCACCACGACGCCGCCCGCCGCACAAACACG GTACCACATCCGCCACACCAACGTCCCGTCCTGGTCGGCCACCTCCGCAG CGCTGGAGGCCGACCCGTCGCGGATGCACAACTCATCAGCGCTATGGGCC GCCGCCGCCGAGATCGACCACGCAAGATCGCGGAGGCCTCCCTCTTCATC ACCGTACGCCACCGCCGTCGCACCTACGGCCCCACACCGCGGAGGACCCT CCACGCCCACTACCGCCACGTCCACGCGAGCGCCGGTGGCGGTCGCCGCT ACATCACGGGAGCCGGAGCCGGAGCCGGCATTCGTCACCGCCATGGGGGA GGGGCCCACTTCGTCACCATGGGTAACCCCGACGCGCGAGCCTGGAGTGT CGGAGCGAGAGAAGCAGCTGGAGCGGGAGGTGCAGCGGCTAGCGGTGCAG CTGGCGGCGGCGAAGGTGGGGGGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9507:662..2635+

>mRNA_Ecto-sp9_F_contig9507.17646.1 ID=mRNA_Ecto-sp9_F_contig9507.17646.1|Name=mRNA_Ecto-sp9_F_contig9507.17646.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3948bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9507:662..2635+ (Ectocarpus species9 EcSCA_722f female)
ATGGAGGCTGCTGTGGCAGCCATGGAACGGGAGCTTGCCGCGGCGGCCGC
GGCCTGTGAGGAGTCCACGGCTTCAGCGGAGGAGGCGAAGCACGCCGGGG
CTCTCCAGAGGGCGGAGGCGAGCACCGCGCTGGCTGTTCACCGCAAGCAA
GTCAAGTACATGCAAGCGCTCTCCACCGCGCCCGCGCACGACCCTGCCCT
GCCGGTGGCCGACGGGAAAACAGTGACGGACGCCGCCGCGGCGTCATCGG
GGGCCGACTCCCCCCGCGTGCCCGCTGCCACCACCGCCGGGTTCCAGCTT
CAGGAGGGCGATTTCCCGCAGCTGCCATCGCTGAAGGGGAAGACCGCCTC
GCCGGGGCGCCGGTCGCGCGTGCCGCCGGAACTCATCACCGTGGGGTACG
TGACTTCGGCGGAGGAGAGGGAGCGGGCGGGCGACGCGCCTGCTTCGGAC
ACAGCGGCGGCGGCCGCCACCGCCGGCGCTACCGCCACCGCCGGCGCTGC
TGCTGCCGGGGTGGAGCCACCGCCGCTACGCGTGATCCGTATGACCGACT
CGGAAAAGGCGCAACTGATCGAACAGCAGCAGGCGGAACTGCGGGGGTGG
CACGAGCGTGACTTTGAGGACGGAGCGGCGGAGGCAGCGGCTGGAGGAGA
TGGTGCGGGGGGGGTAACGGCGCCGCCCACCGCCGGGGAGGTGCACGCCG
CGGCTGAGAGGGCCGTCCAGCGTGCCCAAGCGGTGGAGATAGAGGCACGC
AGCGCGAAGTGGGTCGCCCGTGTGCAGCAATACAAGAAGCACAACGCGGG
GGTCCCGTTGGAGGAAGCGGTCCACCGGGTGTGGGAGTCATACGTCAACA
GCTTCTACCTGTACCACCCCGACACGACCCCCGCCCCGCCCAGCGACCCA
CCCGCGTGGTACATCGGGGCGATAGCGGCTTCGACAACATCGCCACGGCA
CACATGGGCTCAGCTCGAGGCGGCGTCGCCGGGATCGTCGCCGCCGGAGG
GGACAGCGGCACCGCGGCCCCCGGCACCGGCCCCCGTAGTCGCCGGCCCC
ACACCACGGCGTTATCAGCACATACGCCACGGCGCCTCGTCCTCGTCATC
GCCGCAGGGGTCCCCCCCGGTCGCCGCCGCCGCCGCCGTTCCACCCGGCC
ACAGCACCGCCGTCGCCGCCGCAACACCCCACCGGCGATACCAGCACATC
CGCCACGGTCCGCCGCCCTCACCGCCGGTGCCCCTGCCGGCGACCACCGC
TGTAGCACGCGACGCCCATCGCCCCACCGTCAGCACCACCGCCCACCACA
GCCACCGCGCCACGGCCGCTGCATCCACCAACAGCAACCACCGTCCCACC
TCCGCCACCAACCATCACGGTCACCGTTCCACCGCCGCCCCCGCTACCAC
ACAACGCGGCCACGTCGTCCGCCACACCAACCTGCCGCCCTACTCCGGTC
GAGCCCTCGCCCCCACCTACCACCAGCCGTCGCCGACGCCGTCGCCGGCG
GCCGCGCCGCGCGCCCGCACCACCACGACGCCGCCCGCCGCACAAACACG
GTACCACATCCGCCACACCAACGTCCCGTCCTGGTCGGCCACCTCCGCAG
CGCTGGAGGCCGACCCGTCGCGGATGCACAACTCATCAGCGCTATGGGCC
GCCGCCGCCGAGATCGACCACGCAAGATCGCGGAGGCCTCCCTCTTCATC
ACCGTACGCCACCGCCGTCGCACCTACGGCCCCACACCGCGGAGGACCCT
CCACGCCCACTACCGCCACGTCCACGCGAGCGCCGGTGGCGGTCGCCGCT
ACATCACGGGAGCCGGAGCCGGAGCCGGCATTCGTCACCGCCATGGGGGA
GGGGCCCACTTCGTCACCATGGGTAACCCCGACGCGCGAGCCTGGAGTGT
CGGAGCGAGAGAAGCAGCTGGAGCGGGAGGTGCAGCGGCTAGCGGTGCAG
CTGGCGGCGGCGAAGGTGGGGGGGATGGAGGCTGCTGTGGCAGCCATGGA
ACGGGAGCTTGCCGCGGCGGCCGCGGCCTGTGAGGAGTCCACGGCTTCAG
CGGAGGAGGCGAAGCACGCCGGGGCTCTCCAGAGGGCGGAGGCGAGCACC
GCGCTGGCTGTTCACCGCAAGCAAGTCAAGTACATGCAAGCGCTCTCCAC
CGCGCCCGCGCACGACCCTGCCCTGCCGGTGGCCGACGGGAAAACAGTGA
CGGACGCCGCCGCGGCGTCATCGGGGGCCGACTCCCCCCGCGTGCCCGCT
GCCACCACCGCCGGGTTCCAGCTTCAGGAGGGCGATTTCCCGCAGCTGCC
ATCGCTGAAGGGGAAGACCGCCTCGCCGGGGCGCCGGTCGCGCGTGCCGC
CGGAACTCATCACCGTGGGGTACGTGACTTCGGCGGAGGAGAGGGAGCGG
GCGGGCGACGCGCCTGCTTCGGACACAGCGGCGGCGGCCGCCACCGCCGG
CGCTACCGCCACCGCCGGCGCTGCTGCTGCCGGGGTGGAGCCACCGCCGC
TACGCGTGATCCGTATGACCGACTCGGAAAAGGCGCAACTGATCGAACAG
CAGCAGGCGGAACTGCGGGGGTGGCACGAGCGTGACTTTGAGGACGGAGC
GGCGGAGGCAGCGGCTGGAGGAGATGGTGCGGGGGGGGTAACGGCGCCGC
CCACCGCCGGGGAGGTGCACGCCGCGGCTGAGAGGGCCGTCCAGCGTGCC
CAAGCGGTGGAGATAGAGGCACGCAGCGCGAAGTGGGTCGCCCGTGTGCA
GCAATACAAGAAGCACAACGCGGGGGTCCCGTTGGAGGAAGCGGTCCACC
GGGTGTGGGAGTCATACGTCAACAGCTTCTACCTGTACCACCCCGACACG
ACCCCCGCCCCGCCCAGCGACCCACCCGCGTGGTACATCGGGGCGATAGC
GGCTTCGACAACATCGCCACGGCACACATGGGCTCAGCTCGAGGCGGCGT
CGCCGGGATCGTCGCCGCCGGAGGGGACAGCGGCACCGCGGCCCCCGGCA
CCGGCCCCCGTAGTCGCCGGCCCCACACCACGGCGTTATCAGCACATACG
CCACGGCGCCTCGTCCTCGTCATCGCCGCAGGGGTCCCCCCCGGTCGCCG
CCGCCGCCGCCGTTCCACCCGGCCACAGCACCGCCGTCGCCGCCGCAACA
CCCCACCGGCGATACCAGCACATCCGCCACGGTCCGCCGCCCTCACCGCC
GGTGCCCCTGCCGGCGACCACCGCTGTAGCACGCGACGCCCATCGCCCCA
CCGTCAGCACCACCGCCCACCACAGCCACCGCGCCACGGCCGCTGCATCC
ACCAACAGCAACCACCGTCCCACCTCCGCCACCAACCATCACGGTCACCG
TTCCACCGCCGCCCCCGCTACCACACAACGCGGCCACGTCGTCCGCCACA
CCAACCTGCCGCCCTACTCCGGTCGAGCCCTCGCCCCCACCTACCACCAG
CCGTCGCCGACGCCGTCGCCGGCGGCCGCGCCGCGCGCCCGCACCACCAC
GACGCCGCCCGCCGCACAAACACGGTACCACATCCGCCACACCAACGTCC
CGTCCTGGTCGGCCACCTCCGCAGCGCTGGAGGCCGACCCGTCGCGGATG
CACAACTCATCAGCGCTATGGGCCGCCGCCGCCGAGATCGACCACGCAAG
ATCGCGGAGGCCTCCCTCTTCATCACCGTACGCCACCGCCGTCGCACCTA
CGGCCCCACACCGCGGAGGACCCTCCACGCCCACTACCGCCACGTCCACG
CGAGCGCCGGTGGCGGTCGCCGCTACATCACGGGAGCCGGAGCCGGAGCC
GGCATTCGTCACCGCCATGGGGGAGGGGCCCACTTCGTCACCATGGGTAA
CCCCGACGCGCGAGCCTGGAGTGTCGGAGCGAGAGAAGCAGCTGGAGCGG
GAGGTGCAGCGGCTAGCGGTGCAGCTGGCGGCGGCGAAGGTGGGGGGG
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