mRNA_Ecto-sp9_F_contig95.17632.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig95.17632.1
Unique NamemRNA_Ecto-sp9_F_contig95.17632.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU3_ECTSI)

HSP 1 Score: 832 bits (2150), Expect = 5.390e-301
Identity = 411/427 (96.25%), Postives = 414/427 (96.96%), Query Frame = 2
Query:   65 MSALEGQQWYIEEITPVEDNDELGDVVCEPSVTVESEPVDSVQKAVIALDIGSAATLDAQQQSKVGKPASVTSTGAVAHPPVGGIGGRSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 1345
            MSALEGQQWYIEEI PVEDNDELGDVVCEPSVTVESEP      AVIALDI SAATLD QQQSKVGKPASVTSTGAVAHPPVGGIG RSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDI CFDAA+GKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLS+R+NLACRRVFCQPFE GTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPT AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA
Sbjct:    1 MSALEGQQWYIEEIPPVEDNDELGDVVCEPSVTVESEP------AVIALDIRSAATLDTQQQSKVGKPASVTSTGAVAHPPVGGIGDRSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIHCFDAAIGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSNRANLACRRVFCQPFESGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTTAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 421          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZD4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.770e-39
Identity = 123/348 (35.34%), Postives = 167/348 (47.99%), Query Frame = 2
Query:  329 SSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVS---GAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV------PLPCVDIPPRNAHTAVLDGET-MIVIAGASPEGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNS-EGTTGE---RATTILLMGGR-SAGGVLRDLFALRTDTWTWKRLKDA-PVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDD 1324
            S+ G  W C+     SS   PS RGGC+ T VGS   + GGAD    H +D+   D    +W +  V+    A PSPR+GHS VA G  LV++GG N      +ND+F L     E + W       P P      RN+H+A +   T M+V  GAS  G  +DV  +DL+D S    + V CQ               G  P AREMHS   + + +    E   +A +IL++GGR  +G VL D ++L   TW W +   A P  RCAH A  V +   + ++GG DG     D + L + G G       +P P  RF HA  A    G M++FGG+    DL D
Sbjct:  104 SADGGAWTCECRV--SSANFPS-RGGCTATMVGSSMFVVGGADRAGNHMNDVHVLDTTSWEWRQATVAQDAAAAPSPRSGHSTVACGSHLVLFGGANMSVEACYNDVFLLATDGDE-LTWSQADPSGPKPTA----RNSHSATMVSPTAMVVFGGASEMGPLNDVHVLDLADLSAPVWQAVQCQ---------------GLAPTAREMHSATLWPTVDAMAAESVAQAPSILVLGGRVESGEVLADAWSLNPGTWAWTKSDHALPTPRCAHVATVVNSQ--VVLFGGIDGAGLPEDLMALDEEGWGPVELVGSTPPPP-RFGHAGTAAPGVG-MLIFGGISLTDDLLD 424          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.150e-38
Identity = 111/334 (33.23%), Postives = 161/334 (48.20%), Query Frame = 2
Query:  374 SSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSD--IDCFDAAVGK--WEKTPVSGAPPSPRNGHSAVALGES-LVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGE-----TMIVIAGASPEGQTDDVFTIDLSDRSNLACRRVF-CQPFEPGTG-ERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSA-GGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQA------AGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRIS-PTPAGRFAHAACAVGLE-GEMIVFGGVHPGQ 1312
            SS + PS RG  SW   G+K+VLFGGA    +HF+D  I  FD+A  K  W + P+ G  P  R+GH+AVA+ ++ ++++GGM+       +D++ L    T  + W  + C   P  ++  AVL        T++++ G + +G                 C RV+   P EP    ER+CS    G                             GGR A G VL D ++L T  W W++  D P ARCA +A  + A      +G +A++GGWDGGT VA+DL + DV    W+        P GRFAH  CA     G+++VFGGV P +
Sbjct:    6 SSGEAPSARGDFSWVACGTKYVLFGGAAMTGEHFNDTWILTFDSATNKCTWTQPPLKGKAPPARSGHAAVAMDDTTMLMFGGMDPACNAARSDVWALN---TATITWRQIACEGAPALSSAAAVLIRSGGARATLVLVGGVAADGP----------------CMRVWSADPAEPLRWVERQCS----GAAPXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGAEGAVLSDAWSLDTQAWRWRQHSDCPAARCALAAWELGAGDESADSGCVAVFGGWDGGTCVANDLFILDVAAQSWSAAAWDVEEPPGRFAHRCCAAAARSGDVLVFGGVCPEE 316          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMV0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 8.320e-37
Identity = 114/383 (29.77%), Postives = 172/383 (44.91%), Query Frame = 2
Query:  347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGES-LVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPP--RNAHTAVL--DGETMIVIAGASPE-GQTDDVFT-------------------------------IDLSDRSNLACRRVFCQPFEPGTGERRC----------SEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSA-GGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAG--IMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 1345
            W C+ +   +   +P+ RGG S    G+   LFGGAD    HF D+  +D    +W +    G  PS R  H+ V LG+  L++ GG + ++ V ++D F L     E + W  +      P  RN H+ V+   GE ++V  GASPE G  +D++                                I L + S  A   +  +  E  TG+  C          +EG  G PA        A  +E  T  R   + ++GGR   G V  D +       TW RL+  P  RCA +A  ++  G  ++ + GGWDG T+++ DL+ + V  G W+   +S TP  RF    CA     ++ VFGG++PG DL DV++L  A
Sbjct:   91 WSCRVVQPKA---RPTGRGGASLVADGNYLYLFGGADRTATHFGDLWRYDCVQTRWARLRTKGEGPSARADHACVNLGDGRLLIQGGADLKNEVMYDDAFLL---DLESLRWTQVATTGTKPFGRNGHSMVVVTPGE-LLVFGGASPEEGPQNDMYVLRLTGEAEGVWEQLTWEGEGPPERDLHAGCVISLGENSTSASGDIAEEAPEDVTGDAGCDEAKVPETPQTEGDAGEPAVESS----AAPTESKTPARRNGMCVIGGRGVMGNVFDDAWVFDLAAGTWSRLRSLPGPRCAAAAATLEVDGQEVVVLQGGWDGATSISGDLYAFTVREGGWSSAGVSETP--RFGGCGCAGASGEDLYVFGGINPGADLADVMVLRGA 460          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP48_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.610e-33
Identity = 108/348 (31.03%), Postives = 164/348 (47.13%), Query Frame = 2
Query:  341 ETWVCKTIAASSSTQQPSPRGGCSWTKVGSK----FVLFGGADERQQHFSDIDCFDAAVGKW-EKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVD---IPPRNAHTAVLDGETMIVIAGASP-EGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRD-LFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADD-----LHLYDVGC-GEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLL 1336
            +T+      A+  +  P+ RGG + T V S+      L GGA+   + F+D+  FD    +W + +P   +   PR+GH+++A+G  + V+GG N ++G  +NDL  L    T+ MEW   PC D    PPR++H AV   + M++  G+SP  G  +D F   L+ +      +    P E  T             A RE+HS C  N+          + + GGR   G L D L  L T+TWTW         RCAH +  V    +   +GGWDGG    DD     L +    C     +  ++    GRFAH  C V  + ++++FGG+    DL+D L+L
Sbjct:   28 KTYTLSACPATYDSNLPAKRGGATLTPVTSEGKTLLYLIGGANRAAEAFNDVHVFDYDKKRWTQASPQDNSAFEPRSGHTSIAIGACIYVFGGANLREGKVYNDLHILN---TDTMEWTS-PCADGDIPPPRSSHIAVALPQGMLIFGGSSPLVGGMNDTFL--LTSKDGHFTWKSIASP-EAAT------------LAKRELHSACVLNN---------LVYICGGRLESGELCDELSILDTETWTWTIESMPAWRRCAHVSGVVHNQWLH--FGGWDGGAEFCDDCWQLALDVRSSCCKAPMRQVELNGQGNGRFAHCGCVV--DDKLVIFGGMTVQDDLNDTLIL 343          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXU9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.360e-32
Identity = 111/364 (30.49%), Postives = 164/364 (45.05%), Query Frame = 2
Query:  341 ETWVCKTIAASSSTQQPSPR---GGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVS-GAPPSPRNGHSAVALGESLVVYGGMNGQDG---------VTFNDLFELRPGSTEGMEWVPLPCVDIP-----------------PRNAHTAVLDGETMIVIAGASP-EGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGR-SAGGVLRDLFALRTDT-WTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISP-TPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVL 1330
            E W+C   A       P P    GG + T V  +   FGG D R    S +  +D+    W     S G PP+ R GH+AVA G  + ++GG    D          V+FNDL  L  G    M W  L  V++                  PRN+HTAVL G+ MI   GA+  EG  DD++  +L   S    +R      E   G+          P AREMHS  A NS+         + +MGGR  +G V RDL+    D  + W  L ++   RC+H   F+ ++ ++  +GGWDG   + D++ ++D+   +W   ++    P  RF HA+C  G    + + GGV+   DL +++
Sbjct:   57 EKWICSEHA-------PCPYAVGGGSTLTNVDGRLYTFGGCDRRGIPSSRLAYYDSDTNDWVCDLRSEGVPPTARFGHTAVASGSKIYIFGGQGFADNESNCSLVTMVSFNDLHCLDTGK---MVWKQLCGVNMAVAPTENPENTKDAAKPSPRNSHTAVLIGDNMITFGGANADEGPMDDMWIFNLKSESWRKVKR------EHQDGKH---------PDAREMHSAYAANSK---------MYIMGGRMGSGDVCRDLWECDPDNGFKWTHLANSSSPRCSHGGDFLSSSKLLCSFGGWDGMGQIFDEITVFDLSQKKWAPAQLHGYLPTERFGHASCVKG--DRLYIIGGVNASDDLKELV 384          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU46_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.800e-31
Identity = 120/386 (31.09%), Postives = 166/386 (43.01%), Query Frame = 2
Query:  383 QQPSPRGGCSWTKVGSK-----FVLFGGADERQQHFSDIDCFDAAVGKWE--KTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV-PLPCVDIPP-RNAHTAVLDGETMIVIAGASPE-GQTDDVFTID--LSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVL-RDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKP---------------------RISPTP----------------------------------AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLL 1336
            Q P+ RGG + T V S        L GGA+   + F D+   D    +W   K  +  AP  PR+GH+AVA G  + V+GG N +    FNDL  L    T  M+W+ P+   D+PP RN+H AV     M+VI G+SP+ G  +DV+ +    SD   L  RR++  P                + + RE+HS C        G+R   IL++GGRS+ G L  DL  L TD+WTW         RCAH++  V     +  +GGW+GG     D     +     + P                     ++ P P                                  AGRFAH AC V  E   +VFGG+ P  DL+DV +L
Sbjct:   43 QLPAKRGGATLTAVTSAQGKTLLYLIGGANRAAEAFGDVHVLDWETMRWNQAKPLLESAPFIPRSGHTAVAWGSRIFVFGGANLRIDTVFNDLHVL---DTVQMKWLRPIVGGDVPPPRNSHVAVATAHGMVVIGGSSPQVGAMNDVYLLPWPASDGDALRWRRIY--PTST-------------LMSKRELHSACV------DGDR---ILVVGGRSSSGQLCSDLCVLNTDSWTWTITPLPAWQRCAHASGVVGRTRWLH-FGGWEGGQDFLSDCWELSLDSSVQSSPACASTSTSRERRRGYRDTSICQMRPVPLQLVVGQPKDPSTCPNQHVIDVAFMDPEETATGLAGRFAHCACVVD-ESTFVVFGGMTPEADLNDVWVL 399          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HB55_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.840e-30
Identity = 105/374 (28.07%), Postives = 171/374 (45.72%), Query Frame = 2
Query:  347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLF--GGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDL--FELRPGS-----TEGMEWVPLPCVDIP-PRNAHTAV--------LDGETMIVIAGASPE-GQTDDVFTIDLSDRS-NLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGG-VLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVAD------------DLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEG-----------EMIVFGGVHPGQDLDDVLLL 1336
            +  +++A   S  +P+ RGG + T+VG   +++  GGA+     F D+ CFD     W+    S    SPR+GHSAVA+G  + V+GG++   G ++ND+  F+ R  S      EG         + P PRNAH A+        L+   M+V  G+SP+ G +D++F + +     + A R     P              G VP ARE+HS    +         + I   GGR+  G +  D+  L   +WTW+ +      RC+ +A  +   G +  +GGWDGG    D             + L +   G+  +P +S  P  RF H +  V ++             +++FGG++   DLDD++L+
Sbjct:   11 YAVESVAMDESALKPAKRGGATLTQVGEGGLVYLIGGANREGASFGDVHCFDFETRAWKLVSPSSGSLSPRSGHSAVAVGAKIYVFGGLDVAAGASYNDVNVFDTRTSSWCEAAVEG---------EAPRPRNAHAAIVLPEEDDSLETRRMLVHGGSSPKFGASDELFLLHVPVHDVDTALRWEKLSPD-------------GEVPEARELHSALLQSE--------SAICFAGGRNFDGKICTDMATLDIKSWTWQLVPICEWNRCSLAAGVID--GELVSFGGWDGGRICGDCCRYSDEEESWIQVTLAECKTGKQAEPAVSEVPE-RFGHCSTTVTIQPLNQPNANATRQGLLIFGGMNAQSDLDDLVLI 351          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NCE7_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.450e-29
Identity = 106/373 (28.42%), Postives = 168/373 (45.04%), Query Frame = 2
Query:  347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLF--GGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDL--FELRP-----GSTEGMEWVPLPCVDIPPRNAHTAVL--------DGETMIVIAGASPE-GQTDDVFTIDLSDRS-NLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGG-VLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLH------------LYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGE-----------MIVFGGVHPGQDLDDVLLL 1336
            +  +++A   S  +P+ RGG + T+VG   +++  GGA+     F D+ CFD     W+    S    SPR+GHSAVA+G  + V+GG +   G TFND+  F+ R       + EG E          PRNAH A++        +   M+V  G+S E G +D++F + +     + A R     P     GER        VP ARE+HS    +         + I  +GGR+  G +  D+  L   +WTW+ +      RC+ +A  +   G +  +GGWD G    D  H            L +   G  T+P +   P  RF H    + ++             +++FGG++   DLDD++L+
Sbjct:   58 YAAESVAMDDSALKPAKRGGATLTQVGEGGLIYLIGGANREGASFGDVHCFDFETRAWKFVIPSSGSLSPRSGHSAVAIGSKIYVFGGFDVAAGATFNDVNVFDTRTLSWYEAAVEGEE--------PRPRNAHAAIILPEDDDSRETRRMLVHGGSSLEVGASDELFLLHVPVHDVDTALRWEKLSP----DGERTS------VPEARELHSALLQSE--------SAICFVGGRNFDGKICTDMATLDIKSWTWQLMPICEWNRCSLAAGVID--GALVSFGGWDVGRICGDCCHYSDEEESWIHATLAECKTGNQTEPAMPEVPE-RFGHCGTTITVQPSNQPNAKATRQGLLIFGGMNAQSDLDDLVLI 401          
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.870e-29
Identity = 118/387 (30.49%), Postives = 168/387 (43.41%), Query Frame = 2
Query:  389 PSPRGGCSWTKV-----GSKFVLFGGADERQQHFSDIDCFDAAVGKWE--KTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV-PLPCVDIPP-RNAHTAVLDGETMIVIAGASPE-GQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVL-RDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMA-----IYGGWDGGTTVADD---LHLYDVGC-------GEWTKP----------------------RISPTP----------------------AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLS 1339
            PS RGG + T V      +   L GGA+   + F D+  FD    +W   K  +     +PR+GH+AVA G  + V+GG N + G  FNDL  L    T+ M W  P    D+PP RN+H AV   + M+VI G+SP+ G  +DV+ +   D  +++ RR+      P +           V + RE+H+ CA +           IL++GGRS+ G+L  D+  L TD+WTW         RCAH      AAG++       +GGW GG     D   L +    C       G  T P                      R SP P                       GRFAH AC V  +  +++FGG+    DL D+ +L+
Sbjct:   44 PSKRGGATLTAVLAAQGNTLLYLIGGANRAAETFGDVHVFDWDAKRWTQAKPSIGSTTFTPRSGHTAVARGSRIYVFGGANLRVGAVFNDLHVL---DTDTMTWSQPEVGGDVPPARNSHVAVATDKGMVVIGGSSPQVGAMNDVYLLAWDD--DMSWRRI-----RPSSST---------VMSKRELHAACAIHDR---------ILVVGGRSSSGILCDDVCELHTDSWTWTITPLTSWHRCAH------AAGVLGGTHWVHFGGWGGGHDFLSDCWQLPVRPAACHDNVGIAGPPTSPTTLNAIEPCQTSMHPVPLQVVHRHSPPPPPLEETPHIVDVALVGSEEAGLVGRFAHCACVV-EDASLVMFGGMTTDADLHDLWVLT 395          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.390e-30196.25protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU3... [more]
Hypothetical7.770e-3935.34protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized2.150e-3833.23protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
Hypothetical8.320e-3729.77protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized2.610e-3331.03protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Hypothetical1.360e-3230.49protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]
Uncharacterized6.800e-3131.09protein n=1 Tax=Aphanomyces invadans TaxID=157072 ... [more]
Uncharacterized5.840e-3028.07protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Uncharacterized1.450e-2928.42protein n=4 Tax=Phytophthora fragariae TaxID=53985... [more]
Uncharacterized1.870e-2930.49protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig95contigEcto-sp9_F_contig95:392..6597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score837.4
Seed ortholog evalue3e-240
Seed eggNOG ortholog2880.D8LRU3
EggNOG free text desc.nitrile biosynthetic process
EggNOG OGsKOG0379@1,KOG0379@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKelch-type beta propeller
Ec32 orthologEc-08_002460.1
Exons7
Model size1916
Cds size1284
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931032.7835455-UTR-Ecto-sp9_F_contig95:391..9591622931032.7835455-UTR-Ecto-sp9_F_contig95:391..959Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 392..959 -
1692279001.6178167-UTR-Ecto-sp9_F_contig95:391..9591692279001.6178167-UTR-Ecto-sp9_F_contig95:391..959Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 392..959 -
1622931033.0096219-UTR-Ecto-sp9_F_contig95:6533..65971622931033.0096219-UTR-Ecto-sp9_F_contig95:6533..6597Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 6534..6597 -
1692279001.7188685-UTR-Ecto-sp9_F_contig95:6533..65971692279001.7188685-UTR-Ecto-sp9_F_contig95:6533..6597Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 6534..6597 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931032.8171291-CDS-Ecto-sp9_F_contig95:959..11581622931032.8171291-CDS-Ecto-sp9_F_contig95:959..1158Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 960..1158 -
1692279001.629036-CDS-Ecto-sp9_F_contig95:959..11581692279001.629036-CDS-Ecto-sp9_F_contig95:959..1158Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 960..1158 -
1622931032.8386667-CDS-Ecto-sp9_F_contig95:1927..20361622931032.8386667-CDS-Ecto-sp9_F_contig95:1927..2036Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 1928..2036 -
1692279001.6417344-CDS-Ecto-sp9_F_contig95:1927..20361692279001.6417344-CDS-Ecto-sp9_F_contig95:1927..2036Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 1928..2036 -
1622931032.860511-CDS-Ecto-sp9_F_contig95:3239..36231622931032.860511-CDS-Ecto-sp9_F_contig95:3239..3623Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 3240..3623 -
1692279001.6537309-CDS-Ecto-sp9_F_contig95:3239..36231692279001.6537309-CDS-Ecto-sp9_F_contig95:3239..3623Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 3240..3623 -
1622931032.9112747-CDS-Ecto-sp9_F_contig95:3844..39801622931032.9112747-CDS-Ecto-sp9_F_contig95:3844..3980Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 3845..3980 -
1692279001.665237-CDS-Ecto-sp9_F_contig95:3844..39801692279001.665237-CDS-Ecto-sp9_F_contig95:3844..3980Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 3845..3980 -
1622931032.935149-CDS-Ecto-sp9_F_contig95:4232..43311622931032.935149-CDS-Ecto-sp9_F_contig95:4232..4331Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 4233..4331 -
1692279001.6770198-CDS-Ecto-sp9_F_contig95:4232..43311692279001.6770198-CDS-Ecto-sp9_F_contig95:4232..4331Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 4233..4331 -
1622931032.962428-CDS-Ecto-sp9_F_contig95:5058..52231622931032.962428-CDS-Ecto-sp9_F_contig95:5058..5223Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 5059..5223 -
1692279001.6884625-CDS-Ecto-sp9_F_contig95:5058..52231692279001.6884625-CDS-Ecto-sp9_F_contig95:5058..5223Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 5059..5223 -
1622931032.98835-CDS-Ecto-sp9_F_contig95:6341..65331622931032.98835-CDS-Ecto-sp9_F_contig95:6341..6533Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 6342..6533 -
1692279001.7056682-CDS-Ecto-sp9_F_contig95:6341..65331692279001.7056682-CDS-Ecto-sp9_F_contig95:6341..6533Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 6342..6533 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig95.17632.1prot_Ecto-sp9_F_contig95.17632.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig95 960..6533 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig95.17632.1

>prot_Ecto-sp9_F_contig95.17632.1 ID=prot_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=428bp
MSALEGQQWYIEEITPVEDNDELGDVVCEPSVTVESEPVDSVQKAVIALD
IGSAATLDAQQQSKVGKPASVTSTGAVAHPPVGGIGGRSSRGETWVCKTI
AASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKW
EKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGST
EGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSD
RSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGE
RATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQA
AGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAV
GLEGEMIVFGGVHPGQDLDDVLLLSAA*
back to top

mRNA from alignment at Ecto-sp9_F_contig95:392..6597-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig95.17632.1 ID=mRNA_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6206bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:392..6597- (Ectocarpus species9 EcSCA_722f female)
CATGATCCCTGTACACAGCATCCAGTTCCTGTGACGGAAAGCAGGGACAG GACAGCAGGTGGTCATGTCAGCCCTGGAGGGCCAACAATGGTACATCGAG GAAATAACCCCCGTAGAAGACAACGACGAGCTGGGTGATGTGGTGTGCGA ACCTTCTGTGACTGTCGAAAGCGAACCTGTTGATTCCGTGCAGAAGGCCG TGATCGCTCTTGATATCGGTTCAGCTGCGACATTGGATGCACAACAACAA TCGAAGGTGTGTGCCTACAGCAGTACAGGATCTGATGCAGATACAACTAA GAGGTACTGACACATACCCAAGAGTTCAGCTTGGAGCATCACCAACAATC TTTTGTCGTCAATTTTTGGTGGATATATGCCGGACAACCACGTGACAACA GGCCGCATAGACTAACAGCGTACTGGCTGTAAAACATGTGCATGTAGTGT ATGTAGTGGCGCTGGTGGTATCTTGATCTTTCAACGTTTCCTTCGAAGAT TAAAGGTACCGCAGCAGTACTGGGTCGCAAGCGGAGGACAACAGAGTAGG GGGGGGGTGCAATTCTAAGGAGTGTATTCTGAGGCAATGCGGCATGAGGG GTGACTTATTAACCACGATTTTCTGTGTACCCCCGCATAGCTTCTCTCAC TATACATGTATGTACGGAGCTGCTGTAAGCACACTTTACTTGCAGTGTGC AGCGAGAGTTGAGCACTTGGGCAGCTACACTTCCGCGGAAATGAAAGGTC AGAAACTTTGCAGCAAGAGAGGTGCTCATGTGACTATGTGATCATGATGT ATGTGTCCAGTTTATTCACAGGGCCGTGTGGTATGCATCCTTCCCTGCCT GGGGTGCACCATGATCGTACAATTGTACGTCTGTTGTGTTGACTGGACAA CAGCCTGACCAGTTGTGAGAGAAAACAGACACTTCAAAGAGTGCGCACCA TTGGGGAGGGTATTCCTCAAACGTCCATCCGCACGCCTCAGCCCCGACCA ACAACTGTAGCTCCTCTCGTCGCAATCTGTACATACCTCCCTGATATGTT CATTCCTTGGCTGTGTCGCACGATATGACCCGACCCCGAAAACTACATAA CTTGGCTACCATTGTAGAATAGTTGTGCTCCGGATTCTCATCGCACGTGG TTGTTATTTGTTTTCCCAGCTTTGCGACAACCCACAACCAGGCAGGAAAT CAACTCACACTCCAGACCGGCGTGGCAAAACGAAAGCCCCCGCGAAGGAA CACAGAGACCAAATGGAGTGCGCGGTGAGAGAAGGCAGGTTTGGTTGCAT CTGGTCGGATCAGTTATTATGAAACATGACGCTCCAAGCTTGAACTGCTT TTTGTTGGATCTTGACCGCTCCAGGTAGGGAAGCCAGCGAGTGTTACCAG CACCGGCGCGGTGGCGCATCCACCTGTAGGCGGCATCGGAGGCCGATCAT CACGTGGTGAAACTTGGGTTTGCAAAACGATAGCGGCAAGCTCTTCGACG CAGCAGCCATCTCCCAGAGGGGGGTGCTCGTGGACGAAGGTCAGAGCTAC ATTAGTTCTCCCCTTACTCGTAGAGGTTGGGGTGTATCCACAAGGTGTGT TGCAACCAACGAGGTTTTACGTCGGATACAAACCGAAACAAGCTTAAAAC CGCGAGGCCTGCATGCCACAAAGGATGTAACGTCTAGTAGACAAACGGCA AGAGTGGGCAGATATCACCACCAAGAACGCTAGCCCGTGTTTGTTGATGC ATTCGCATGTGATTTTTGGGGACGAGACATCCATTTGGGTGGTTTGAAGC ACATGGATGAAAACAGGACCGCCGTGTTTCCGTGTTTCCGCGGTTGACCG AGGAAGGTAGAACGTGCTACATCATTTCTGCATTGCAGTTTCTGGCGACC AAGCCAAGAGCGACTTACAAGCGCCGCAACAGCAGTGCTATGATAACCAG CTTAGCTTTATTCCCGCCAATCCTCTCCTCCGGTTGAGCAAATATCCATG CGTCTGTCTGTGACGCAGGCTTCGAGGTAATCGATTGTATCTAGTGCCTG TTCGTGTTGTGCCCACAGCATCAGGAAGCGAACGCAGGATGCAGTGAAAC TGGTGCGTGCATTGTTAATCTTTCAGCCTTCTTGTTGGCGGGCAGGGCCT GGAGTCCGGCCGTCAGCGTTCGATCTGCACCGAGAAATTTCGCGACCTGT TTCAACCTTCTATGCAGGAGTTTGCATCATGTACAGACGACACCTCATGT TTCGTGTGGCGCACAGGTTGGGTCAAAGTTCGTCCTGTTTGGAGGGGCGG ACGAACGTCAGCAGCACTTTTCCGACATCGACTGCTTTGACGCGGCAGTA GGGAAATGGGAGAAGGTACGTGTTGATTTGCTGTGCCAAACGCGGTGATG AACACAGTGTGCCGCCTCTCATCCTTCATCATATGCATGTCAGCAGTATA TCCAATAAATTGGGGTTCGTGTCTGTTCGTTCATGGCAAATGGTACGCAG AATATGAACTTCTTCCCTTGTGTCGCATGAAGAGGTGCGTTCCGTTAGAT ACGCGTTAAGAACATTAACCTGTCGCTATTCTCACCCGAAAGGACCGCGA CACTCCGCTGCAAGCAGACCCCTGTCAGTGGTGCGCCACCTTCCCCGCGG AATGGTCATTCGGCGGTCGCACTGGGAGAGTCTTTGGTGGTCTACGGCGG TATGAATGGACAGGATGGTGTGACGTTCAACGACCTGTTTGAGCTCCGAC CCGGTGGGTAGGTCGCCGTGACTTTGTCCGCGGTTCTGCCATCATAGTAT CAGTGCGCTGGTTCCATAACGTGCTGCCGTGCCGATAAGATTCATTCTCC TCGCGCACAGCGTCTTTTGAGGTATGTTTTGCTCCAACGTTCAACTGTAC AGGACCTCGGCAGTGAACCGTAGCTTGGTCTACCAAAACAACGCGTCACC CAACTGGCATTCATTGTTGTGCAGGATCTACGGAGGGCATGGAGTGGGTG CCCCTTCCCTGCGTGGACATCCCTCCTCGCAATGCGCACACTGCAGTACT CGATGGGGAAACCATGATAGTCATCGCAGGGGCTTCCCCGGAGGGACAAA CAGACGACGTTTTCACCATCGACTTGTCCGATCGTTCAAACTTGGCCTGT CGGAGAGTGTTCTGCCAGCCGTTCGAACCAGGGACTGGTGAAAGACGTTG TTCGGAAGGCGTTGGTGGAGTACCAGCCGCACGCGAGATGCACTCGACCT GTGCTTATAACTCCGAGGGGACGACGGGTGAACGGGCGACTACAATATTG CTCATGGGCGGACGTTCAGCTGGGGGTGTGCTTCGTGACCTGTTTGCGCT CAGAACAGGTACGAAAAAACCATAATTTTCGGATAAGAGAACTACATGCC AGGCCAGGTGTTAACGACGTTCGAACAAATGAAAATTCAGTGGTCAAAGT ACCAAAATCAATTGTCACTTTTCCCTGAAACTGAGAGAAATCGGCAGACC ATGTTTGTACGAAGAATGGTTCGGGAGTGAAGTTAAAACAAACCTAGCGC GAGGGGGAGCGCCAGCGGGAAGCATTTTCTTACGTGTAGTTTTGTACGCT CCAGTTCACATGTTGACGAACATCTTGCCGAATAAATGACGACGTGCCTT GGGGGTTGGTGTGCCATTGTGGGTGCCATGGCCTTTTTGGCGAAGATGTG GCACCGTAGGGTGCCAAACGTGTCGCAAAATTACAATGGAGTGACTGGAA GAAGTCAACGTCAGAGAGTAGTTGGTTTATATCGGTATTGTTGACTCCAT ATGGGTTTGATTTTCCGCCCATAACGTTTTGAAGGAGGAAGCAACAGCCG TATTGTAACAATTGGTAGCTTTGCAGTCCGTTTTTCATGCCCAGGGTTTG ATGCTGTAGGATGTTGTGTATATCGGGAAAAATGTTGCAACTATCCTATC TTTCACGAGAACGCGCAAATCAACGGTTCAGCTCTGCTGTGATCATCGGC CTCGTTCGTAGTTGTGGCGATCGGCGTTTTCTCTCGAAGAACCGCGTGAG CCGGCCCGGTTTTGGGCTTGCCGGCGAGCTGTGCGTCTTTTCTGGCTGTA ATGCCACGAACACCCGCGGTTTCGGTAGTGGGGGTATCGATAGTCTCACT TTGAGCAGTGCATGCATCCACTTTGAGCAGCCCCACGGGATCCGGTCGAA CAGAGCGACCCCTGCAATCCGTGTGCGACTTTGATTGGTTTGGATTAAAG AAGTACCTTGGGGACTCCAACAATGCTGAAAATGAAATGGCGTCGTTTAG AGGTATTGCATCGATTCTTCGACTTACTCATCTCTCTGGGTGTAGGTTTT TTCATTTTGCGAGTATCGTTAATACCCGGCCTCAGCCATTACGCAGTGTA GTTCGATCAAGGGAATTTAACATCAGTATCAGCGCGCGAGAGACTATCCA TATATTCATGTTTCTGTGTGTCACGTCTCTAGGATAGGTCCCAATAAAAA CGTCACACAAATTCCGTTCTTGACCGCAAGTTGTTTCCTCTGCCTGCAAT AACCTTAACAGATACCTGGACATGGAAGCGATTAAAAGATGCTCCTGTTG CCCGGTGCGCCCATTCAGCTTGTTTCGTGCAAGCCGCAGGGATCATGGCC ATCTACGGGGGATGGGATGGGTAAGACTACTTTATGATCACACAAATTGG ATGCAGATCACCCCCATAGTCGGTAAACATTCTCTGGGAAACACAGTCGG CCGAAATTGGCACGAAAGTAAACGAATATGTTGTACCAGTCTGAAACGCA GCTTCACGGTGGACCCACACTACATCCCGCTTGGTCGCTTGTTCAGAGCG GTTCGGTGAAATGAGCACATGAACCTCGACCCAACATTGTGCATCTTAAC TGCGGGCTTCTGTTAGGGTACTTGGAGGTAGACATGTGATCGTGGTTGAC CATGGTTATTTGGCGTCGTCAGATGCTATGACGCGACGTCATGCTAGATT AGGGCTTTATGCCGAGGCATGTGCCCTTCTGTTCAGTGTGCGTACGATCC GGTCATCGTGTGTGCTTGGGATCTTGTGAGTTGGCTTGGGAAAGCGTTAA TCAAGAAAAAGAGAACAACGGAAACCAGCAACAACCTGCACCTGTGGTCG GACAAGAGAGTTCCACACAGCTCAAGGGTGATTGATTCTGAAGGAAGAGG TCAAATCTTATTACACTGGCGTCGTCGGCAGGGCATAACACTTCCTGTTG AAATAGGGATTGGAAATACGATTAGAACGTGCGAAGAATACGAACTCGAC CCATGTTTATTACTATTAAGAACCTGAGAGCACTTTTGGTGCACTCAATT AATCTACCATTGGGTTGCGCTAGATTGCACCAAGAGTACACTACTACAGT AGTACCGCTGACATCCGCCCACTTGCCTGTTTTAAACAGGGGCACAACCG TGGCCGACGATCTTCATCTTTACGATGTGGGATGTGGAGAGTGGACGAAA CCAAGAATTTCTCCAACACCAGCCGGTCGTTTCGCTCACGCGGCGTGCGC TGTTGGTTTGGAGGGAGAGATGATTGTGTTCGGAGGGGTACACCCTGGAC AGGATCTGGACGATGTTTTGTTGCTGTCTGCCGCTTAACCTACATGCTGC GTGTCATTGGTTCGAAAAGAGAAGCGGCAAAGCTCAGCCTTTTCCAGCAA GCGTCCTGTTCGGAGAACGAAATCCCGGAGCGCTGCTGCCCCAATCCGTA CGTACCCAAGCACACCATCGCGAGTGTATCATCTCAGATATGCGATCGGA GTTTTGAGTAAACAAGCGACTGTCGGATTGTGAAAATGAGTGAAACTATA TAAAGCATGGCATGGTGGAAGGAAATGACACGTGTTGCTAGGATCGAACC GAAGGTATGCATGTATCACACAATCAAGGGAGCAAGCAGCAGCTGAGACC AGTCATTGTTTGTGGTACTTCGGTACGATATTCGATCTGGAAATGATGAA GTATGAAATATGTGTGTGTGGGGGGTGTATGTAAGCTGTTAGGGGTCCAA ATCCGCCGCCCCCGTTGTATATTTGTAGGGTCCCGTCATGACCGATGATC ATTTGATCTTCTTGCAACTGGGGATGATGTCTCCTAAATCCTGGCTCGTT CATCGTTCTTTGAGCATATACGAAACATTCATCATGGGCCCAGACACAGA ACGAAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig95:392..6597-

>mRNA_Ecto-sp9_F_contig95.17632.1 ID=mRNA_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2568bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:392..6597- (Ectocarpus species9 EcSCA_722f female)
ATGTCAGCCCTGGAGGGCCAACAATGGTACATCGAGGAAATAACCCCCGT
AGAAGACAACGACGAGCTGGGTGATGTGGTGTGCGAACCTTCTGTGACTG
TCGAAAGCGAACCTGTTGATTCCGTGCAGAAGGCCGTGATCGCTCTTGAT
ATCGGTTCAGCTGCGACATTGGATGCACAACAACAATCGAAGATGTCAGC
CCTGGAGGGCCAACAATGGTACATCGAGGAAATAACCCCCGTAGAAGACA
ACGACGAGCTGGGTGATGTGGTGTGCGAACCTTCTGTGACTGTCGAAAGC
GAACCTGTTGATTCCGTGCAGAAGGCCGTGATCGCTCTTGATATCGGTTC
AGCTGCGACATTGGATGCACAACAACAATCGAAGGTAGGGAAGCCAGCGA
GTGTTACCAGCACCGGCGCGGTGGCGCATCCACCTGTAGGCGGCATCGGA
GGCCGATCATCACGTGGTGAAACTTGGGTTTGCAAAACGATAGCGGCAAG
CTCTTCGACGCAGCAGCCATCTCCCAGAGGGGGGTGCTCGTGGACGAAGG
TAGGGAAGCCAGCGAGTGTTACCAGCACCGGCGCGGTGGCGCATCCACCT
GTAGGCGGCATCGGAGGCCGATCATCACGTGGTGAAACTTGGGTTTGCAA
AACGATAGCGGCAAGCTCTTCGACGCAGCAGCCATCTCCCAGAGGGGGGT
GCTCGTGGACGAAGGTTGGGTCAAAGTTCGTCCTGTTTGGAGGGGCGGAC
GAACGTCAGCAGCACTTTTCCGACATCGACTGCTTTGACGCGGCAGTAGG
GAAATGGGAGAAGGTTGGGTCAAAGTTCGTCCTGTTTGGAGGGGCGGACG
AACGTCAGCAGCACTTTTCCGACATCGACTGCTTTGACGCGGCAGTAGGG
AAATGGGAGAAGACCCCTGTCAGTGGTGCGCCACCTTCCCCGCGGAATGG
TCATTCGGCGGTCGCACTGGGAGAGTCTTTGGTGGTCTACGGCGGTATGA
ATGGACAGGATGGTGTGACGTTCAACGACCTGTTTGAGCTCCGACCCGAC
CCCTGTCAGTGGTGCGCCACCTTCCCCGCGGAATGGTCATTCGGCGGTCG
CACTGGGAGAGTCTTTGGTGGTCTACGGCGGTATGAATGGACAGGATGGT
GTGACGTTCAACGACCTGTTTGAGCTCCGACCCGGATCTACGGAGGGCAT
GGAGTGGGTGCCCCTTCCCTGCGTGGACATCCCTCCTCGCAATGCGCACA
CTGCAGTACTCGATGGGGAAACCATGATAGTCATCGCAGGGGCTTCCCCG
GAGGGACAAACAGACGACGTTTTCACCATCGACTTGTCCGATCGTTCAAA
CTTGGCCTGTCGGAGAGTGTTCTGCCAGCCGTTCGAACCAGGGACTGGTG
AAAGACGTTGTTCGGAAGGCGTTGGTGGAGTACCAGCCGCACGCGAGATG
CACTCGACCTGTGCTTATAACTCCGAGGGGACGACGGGTGAACGGGCGAC
TACAATATTGCTCATGGGCGGACGTTCAGCTGGGGGTGTGCTTCGTGACC
TGTTTGCGCTCAGAACAGGATCTACGGAGGGCATGGAGTGGGTGCCCCTT
CCCTGCGTGGACATCCCTCCTCGCAATGCGCACACTGCAGTACTCGATGG
GGAAACCATGATAGTCATCGCAGGGGCTTCCCCGGAGGGACAAACAGACG
ACGTTTTCACCATCGACTTGTCCGATCGTTCAAACTTGGCCTGTCGGAGA
GTGTTCTGCCAGCCGTTCGAACCAGGGACTGGTGAAAGACGTTGTTCGGA
AGGCGTTGGTGGAGTACCAGCCGCACGCGAGATGCACTCGACCTGTGCTT
ATAACTCCGAGGGGACGACGGGTGAACGGGCGACTACAATATTGCTCATG
GGCGGACGTTCAGCTGGGGGTGTGCTTCGTGACCTGTTTGCGCTCAGAAC
AGATACCTGGACATGGAAGCGATTAAAAGATGCTCCTGTTGCCCGGTGCG
CCCATTCAGCTTGTTTCGTGCAAGCCGCAGGGATCATGGCCATCTACGGG
GGATGGGATGGATACCTGGACATGGAAGCGATTAAAAGATGCTCCTGTTG
CCCGGTGCGCCCATTCAGCTTGTTTCGTGCAAGCCGCAGGGATCATGGCC
ATCTACGGGGGATGGGATGGGGGCACAACCGTGGCCGACGATCTTCATCT
TTACGATGTGGGATGTGGAGAGTGGACGAAACCAAGAATTTCTCCAACAC
CAGCCGGTCGTTTCGCTCACGCGGCGTGCGCTGTTGGTTTGGAGGGAGAG
ATGATTGTGTTCGGAGGGGTACACCCTGGACAGGATCTGGACGATGTTTT
GTTGCTGTCTGCCGCTTAAGGGCACAACCGTGGCCGACGATCTTCATCTT
TACGATGTGGGATGTGGAGAGTGGACGAAACCAAGAATTTCTCCAACACC
AGCCGGTCGTTTCGCTCACGCGGCGTGCGCTGTTGGTTTGGAGGGAGAGA
TGATTGTGTTCGGAGGGGTACACCCTGGACAGGATCTGGACGATGTTTTG
TTGCTGTCTGCCGCTTAA
back to top