mRNA_Ecto-sp9_F_contig95.17632.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU3_ECTSI) HSP 1 Score: 832 bits (2150), Expect = 5.390e-301 Identity = 411/427 (96.25%), Postives = 414/427 (96.96%), Query Frame = 2
Query: 65 MSALEGQQWYIEEITPVEDNDELGDVVCEPSVTVESEPVDSVQKAVIALDIGSAATLDAQQQSKVGKPASVTSTGAVAHPPVGGIGGRSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 1345
MSALEGQQWYIEEI PVEDNDELGDVVCEPSVTVESEP AVIALDI SAATLD QQQSKVGKPASVTSTGAVAHPPVGGIG RSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDI CFDAA+GKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLS+R+NLACRRVFCQPFE GTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPT AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA
Sbjct: 1 MSALEGQQWYIEEIPPVEDNDELGDVVCEPSVTVESEP------AVIALDIRSAATLDTQQQSKVGKPASVTSTGAVAHPPVGGIGDRSSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIHCFDAAIGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSNRANLACRRVFCQPFESGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTTAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 421
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZD4_9STRA) HSP 1 Score: 158 bits (400), Expect = 7.770e-39 Identity = 123/348 (35.34%), Postives = 167/348 (47.99%), Query Frame = 2
Query: 329 SSRGETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVS---GAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV------PLPCVDIPPRNAHTAVLDGET-MIVIAGASPEGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNS-EGTTGE---RATTILLMGGR-SAGGVLRDLFALRTDTWTWKRLKDA-PVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDD 1324
S+ G W C+ SS PS RGGC+ T VGS + GGAD H +D+ D +W + V+ A PSPR+GHS VA G LV++GG N +ND+F L E + W P P RN+H+A + T M+V GAS G +DV +DL+D S + V CQ G P AREMHS + + + E +A +IL++GGR +G VL D ++L TW W + A P RCAH A V + + ++GG DG D + L + G G +P P RF HA A G M++FGG+ DL D
Sbjct: 104 SADGGAWTCECRV--SSANFPS-RGGCTATMVGSSMFVVGGADRAGNHMNDVHVLDTTSWEWRQATVAQDAAAAPSPRSGHSTVACGSHLVLFGGANMSVEACYNDVFLLATDGDE-LTWSQADPSGPKPTA----RNSHSATMVSPTAMVVFGGASEMGPLNDVHVLDLADLSAPVWQAVQCQ---------------GLAPTAREMHSATLWPTVDAMAAESVAQAPSILVLGGRVESGEVLADAWSLNPGTWAWTKSDHALPTPRCAHVATVVNSQ--VVLFGGIDGAGLPEDLMALDEEGWGPVELVGSTPPPP-RFGHAGTAAPGVG-MLIFGGISLTDDLLD 424
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN6_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.150e-38 Identity = 111/334 (33.23%), Postives = 161/334 (48.20%), Query Frame = 2
Query: 374 SSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSD--IDCFDAAVGK--WEKTPVSGAPPSPRNGHSAVALGES-LVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGE-----TMIVIAGASPEGQTDDVFTIDLSDRSNLACRRVF-CQPFEPGTG-ERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSA-GGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQA------AGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRIS-PTPAGRFAHAACAVGLE-GEMIVFGGVHPGQ 1312
SS + PS RG SW G+K+VLFGGA +HF+D I FD+A K W + P+ G P R+GH+AVA+ ++ ++++GGM+ +D++ L T + W + C P ++ AVL T++++ G + +G C RV+ P EP ER+CS G GGR A G VL D ++L T W W++ D P ARCA +A + A +G +A++GGWDGGT VA+DL + DV W+ P GRFAH CA G+++VFGGV P +
Sbjct: 6 SSGEAPSARGDFSWVACGTKYVLFGGAAMTGEHFNDTWILTFDSATNKCTWTQPPLKGKAPPARSGHAAVAMDDTTMLMFGGMDPACNAARSDVWALN---TATITWRQIACEGAPALSSAAAVLIRSGGARATLVLVGGVAADGP----------------CMRVWSADPAEPLRWVERQCS----GAAPXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGAEGAVLSDAWSLDTQAWRWRQHSDCPAARCALAAWELGAGDESADSGCVAVFGGWDGGTCVANDLFILDVAAQSWSAAAWDVEEPPGRFAHRCCAAAARSGDVLVFGGVCPEE 316
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMV0_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.320e-37 Identity = 114/383 (29.77%), Postives = 172/383 (44.91%), Query Frame = 2
Query: 347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGES-LVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPP--RNAHTAVL--DGETMIVIAGASPE-GQTDDVFT-------------------------------IDLSDRSNLACRRVFCQPFEPGTGERRC----------SEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSA-GGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAG--IMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 1345
W C+ + + +P+ RGG S G+ LFGGAD HF D+ +D +W + G PS R H+ V LG+ L++ GG + ++ V ++D F L E + W + P RN H+ V+ GE ++V GASPE G +D++ I L + S A + + E TG+ C +EG G PA A +E T R + ++GGR G V D + TW RL+ P RCA +A ++ G ++ + GGWDG T+++ DL+ + V G W+ +S TP RF CA ++ VFGG++PG DL DV++L A
Sbjct: 91 WSCRVVQPKA---RPTGRGGASLVADGNYLYLFGGADRTATHFGDLWRYDCVQTRWARLRTKGEGPSARADHACVNLGDGRLLIQGGADLKNEVMYDDAFLL---DLESLRWTQVATTGTKPFGRNGHSMVVVTPGE-LLVFGGASPEEGPQNDMYVLRLTGEAEGVWEQLTWEGEGPPERDLHAGCVISLGENSTSASGDIAEEAPEDVTGDAGCDEAKVPETPQTEGDAGEPAVESS----AAPTESKTPARRNGMCVIGGRGVMGNVFDDAWVFDLAAGTWSRLRSLPGPRCAAAAATLEVDGQEVVVLQGGWDGATSISGDLYAFTVREGGWSSAGVSETP--RFGGCGCAGASGEDLYVFGGINPGADLADVMVLRGA 460
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP48_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.610e-33 Identity = 108/348 (31.03%), Postives = 164/348 (47.13%), Query Frame = 2
Query: 341 ETWVCKTIAASSSTQQPSPRGGCSWTKVGSK----FVLFGGADERQQHFSDIDCFDAAVGKW-EKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVD---IPPRNAHTAVLDGETMIVIAGASP-EGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRD-LFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADD-----LHLYDVGC-GEWTKPRISPTPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLL 1336
+T+ A+ + P+ RGG + T V S+ L GGA+ + F+D+ FD +W + +P + PR+GH+++A+G + V+GG N ++G +NDL L T+ MEW PC D PPR++H AV + M++ G+SP G +D F L+ + + P E T A RE+HS C N+ + + GGR G L D L L T+TWTW RCAH + V + +GGWDGG DD L + C + ++ GRFAH C V + ++++FGG+ DL+D L+L
Sbjct: 28 KTYTLSACPATYDSNLPAKRGGATLTPVTSEGKTLLYLIGGANRAAEAFNDVHVFDYDKKRWTQASPQDNSAFEPRSGHTSIAIGACIYVFGGANLREGKVYNDLHILN---TDTMEWTS-PCADGDIPPPRSSHIAVALPQGMLIFGGSSPLVGGMNDTFL--LTSKDGHFTWKSIASP-EAAT------------LAKRELHSACVLNN---------LVYICGGRLESGELCDELSILDTETWTWTIESMPAWRRCAHVSGVVHNQWLH--FGGWDGGAEFCDDCWQLALDVRSSCCKAPMRQVELNGQGNGRFAHCGCVV--DDKLVIFGGMTVQDDLNDTLIL 343
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXU9_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.360e-32 Identity = 111/364 (30.49%), Postives = 164/364 (45.05%), Query Frame = 2
Query: 341 ETWVCKTIAASSSTQQPSPR---GGCSWTKVGSKFVLFGGADERQQHFSDIDCFDAAVGKWEKTPVS-GAPPSPRNGHSAVALGESLVVYGGMNGQDG---------VTFNDLFELRPGSTEGMEWVPLPCVDIP-----------------PRNAHTAVLDGETMIVIAGASP-EGQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGR-SAGGVLRDLFALRTDT-WTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISP-TPAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVL 1330
E W+C A P P GG + T V + FGG D R S + +D+ W S G PP+ R GH+AVA G + ++GG D V+FNDL L G M W L V++ PRN+HTAVL G+ MI GA+ EG DD++ +L S +R E G+ P AREMHS A NS+ + +MGGR +G V RDL+ D + W L ++ RC+H F+ ++ ++ +GGWDG + D++ ++D+ +W ++ P RF HA+C G + + GGV+ DL +++
Sbjct: 57 EKWICSEHA-------PCPYAVGGGSTLTNVDGRLYTFGGCDRRGIPSSRLAYYDSDTNDWVCDLRSEGVPPTARFGHTAVASGSKIYIFGGQGFADNESNCSLVTMVSFNDLHCLDTGK---MVWKQLCGVNMAVAPTENPENTKDAAKPSPRNSHTAVLIGDNMITFGGANADEGPMDDMWIFNLKSESWRKVKR------EHQDGKH---------PDAREMHSAYAANSK---------MYIMGGRMGSGDVCRDLWECDPDNGFKWTHLANSSSPRCSHGGDFLSSSKLLCSFGGWDGMGQIFDEITVFDLSQKKWAPAQLHGYLPTERFGHASCVKG--DRLYIIGGVNASDDLKELV 384
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU46_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.800e-31 Identity = 120/386 (31.09%), Postives = 166/386 (43.01%), Query Frame = 2
Query: 383 QQPSPRGGCSWTKVGSK-----FVLFGGADERQQHFSDIDCFDAAVGKWE--KTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV-PLPCVDIPP-RNAHTAVLDGETMIVIAGASPE-GQTDDVFTID--LSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVL-RDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKP---------------------RISPTP----------------------------------AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLL 1336
Q P+ RGG + T V S L GGA+ + F D+ D +W K + AP PR+GH+AVA G + V+GG N + FNDL L T M+W+ P+ D+PP RN+H AV M+VI G+SP+ G +DV+ + SD L RR++ P + + RE+HS C G+R IL++GGRS+ G L DL L TD+WTW RCAH++ V + +GGW+GG D + + P ++ P P AGRFAH AC V E +VFGG+ P DL+DV +L
Sbjct: 43 QLPAKRGGATLTAVTSAQGKTLLYLIGGANRAAEAFGDVHVLDWETMRWNQAKPLLESAPFIPRSGHTAVAWGSRIFVFGGANLRIDTVFNDLHVL---DTVQMKWLRPIVGGDVPPPRNSHVAVATAHGMVVIGGSSPQVGAMNDVYLLPWPASDGDALRWRRIY--PTST-------------LMSKRELHSACV------DGDR---ILVVGGRSSSGQLCSDLCVLNTDSWTWTITPLPAWQRCAHASGVVGRTRWLH-FGGWEGGQDFLSDCWELSLDSSVQSSPACASTSTSRERRRGYRDTSICQMRPVPLQLVVGQPKDPSTCPNQHVIDVAFMDPEETATGLAGRFAHCACVVD-ESTFVVFGGMTPEADLNDVWVL 399
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HB55_9STRA) HSP 1 Score: 131 bits (330), Expect = 5.840e-30 Identity = 105/374 (28.07%), Postives = 171/374 (45.72%), Query Frame = 2
Query: 347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLF--GGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDL--FELRPGS-----TEGMEWVPLPCVDIP-PRNAHTAV--------LDGETMIVIAGASPE-GQTDDVFTIDLSDRS-NLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGG-VLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVAD------------DLHLYDVGCGEWTKPRISPTPAGRFAHAACAVGLEG-----------EMIVFGGVHPGQDLDDVLLL 1336
+ +++A S +P+ RGG + T+VG +++ GGA+ F D+ CFD W+ S SPR+GHSAVA+G + V+GG++ G ++ND+ F+ R S EG + P PRNAH A+ L+ M+V G+SP+ G +D++F + + + A R P G VP ARE+HS + + I GGR+ G + D+ L +WTW+ + RC+ +A + G + +GGWDGG D + L + G+ +P +S P RF H + V ++ +++FGG++ DLDD++L+
Sbjct: 11 YAVESVAMDESALKPAKRGGATLTQVGEGGLVYLIGGANREGASFGDVHCFDFETRAWKLVSPSSGSLSPRSGHSAVAVGAKIYVFGGLDVAAGASYNDVNVFDTRTSSWCEAAVEG---------EAPRPRNAHAAIVLPEEDDSLETRRMLVHGGSSPKFGASDELFLLHVPVHDVDTALRWEKLSPD-------------GEVPEARELHSALLQSE--------SAICFAGGRNFDGKICTDMATLDIKSWTWQLVPICEWNRCSLAAGVID--GELVSFGGWDGGRICGDCCRYSDEEESWIQVTLAECKTGKQAEPAVSEVPE-RFGHCSTTVTIQPLNQPNANATRQGLLIFGGMNAQSDLDDLVLI 351
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NCE7_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.450e-29 Identity = 106/373 (28.42%), Postives = 168/373 (45.04%), Query Frame = 2
Query: 347 WVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLF--GGADERQQHFSDIDCFDAAVGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDL--FELRP-----GSTEGMEWVPLPCVDIPPRNAHTAVL--------DGETMIVIAGASPE-GQTDDVFTIDLSDRS-NLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGG-VLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLH------------LYDVGCGEWTKPRISPTPAGRFAHAACAVGLEGE-----------MIVFGGVHPGQDLDDVLLL 1336
+ +++A S +P+ RGG + T+VG +++ GGA+ F D+ CFD W+ S SPR+GHSAVA+G + V+GG + G TFND+ F+ R + EG E PRNAH A++ + M+V G+S E G +D++F + + + A R P GER VP ARE+HS + + I +GGR+ G + D+ L +WTW+ + RC+ +A + G + +GGWD G D H L + G T+P + P RF H + ++ +++FGG++ DLDD++L+
Sbjct: 58 YAAESVAMDDSALKPAKRGGATLTQVGEGGLIYLIGGANREGASFGDVHCFDFETRAWKFVIPSSGSLSPRSGHSAVAIGSKIYVFGGFDVAAGATFNDVNVFDTRTLSWYEAAVEGEE--------PRPRNAHAAIILPEDDDSRETRRMLVHGGSSLEVGASDELFLLHVPVHDVDTALRWEKLSP----DGERTS------VPEARELHSALLQSE--------SAICFVGGRNFDGKICTDMATLDIKSWTWQLMPICEWNRCSLAAGVID--GALVSFGGWDVGRICGDCCHYSDEEESWIHATLAECKTGNQTEPAMPEVPE-RFGHCGTTITVQPSNQPNAKATRQGLLIFGGMNAQSDLDDLVLI 401
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.870e-29 Identity = 118/387 (30.49%), Postives = 168/387 (43.41%), Query Frame = 2
Query: 389 PSPRGGCSWTKV-----GSKFVLFGGADERQQHFSDIDCFDAAVGKWE--KTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWV-PLPCVDIPP-RNAHTAVLDGETMIVIAGASPE-GQTDDVFTIDLSDRSNLACRRVFCQPFEPGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVL-RDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMA-----IYGGWDGGTTVADD---LHLYDVGC-------GEWTKP----------------------RISPTP----------------------AGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLS 1339
PS RGG + T V + L GGA+ + F D+ FD +W K + +PR+GH+AVA G + V+GG N + G FNDL L T+ M W P D+PP RN+H AV + M+VI G+SP+ G +DV+ + D +++ RR+ P + V + RE+H+ CA + IL++GGRS+ G+L D+ L TD+WTW RCAH AAG++ +GGW GG D L + C G T P R SP P GRFAH AC V + +++FGG+ DL D+ +L+
Sbjct: 44 PSKRGGATLTAVLAAQGNTLLYLIGGANRAAETFGDVHVFDWDAKRWTQAKPSIGSTTFTPRSGHTAVARGSRIYVFGGANLRVGAVFNDLHVL---DTDTMTWSQPEVGGDVPPARNSHVAVATDKGMVVIGGSSPQVGAMNDVYLLAWDD--DMSWRRI-----RPSSST---------VMSKRELHAACAIHDR---------ILVVGGRSSSGILCDDVCELHTDSWTWTITPLTSWHRCAH------AAGVLGGTHWVHFGGWGGGHDFLSDCWQLPVRPAACHDNVGIAGPPTSPTTLNAIEPCQTSMHPVPLQVVHRHSPPPPPLEETPHIVDVALVGSEEAGLVGRFAHCACVV-EDASLVMFGGMTTDADLHDLWVLT 395 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig95.17632.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig95.17632.1 >prot_Ecto-sp9_F_contig95.17632.1 ID=prot_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=428bp MSALEGQQWYIEEITPVEDNDELGDVVCEPSVTVESEPVDSVQKAVIALDback to top mRNA from alignment at Ecto-sp9_F_contig95:392..6597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig95.17632.1 ID=mRNA_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6206bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:392..6597- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig95:392..6597- >mRNA_Ecto-sp9_F_contig95.17632.1 ID=mRNA_Ecto-sp9_F_contig95.17632.1|Name=mRNA_Ecto-sp9_F_contig95.17632.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2568bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:392..6597- (Ectocarpus species9 EcSCA_722f female)back to top |