mRNA_Ecto-sp9_F_contig9496.17630.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH07_ECTSI) HSP 1 Score: 1105 bits (2858), Expect = 0.000e+0 Identity = 763/820 (93.05%), Postives = 766/820 (93.41%), Query Frame = 1
Query: 214 MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVLPLLLKQMAYDPTALQQACVTLALEKQPATPGPAAGSAESSMDVDGEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGGQEPAQGAESENDGAAGDDLEXXXXKKEGAVVDQPDRDAQLRWEWKLAVAEPLKLTAEVMTNLCALASGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGALTAVLLEAMAEGGALQRTLATLQTLLAPTPRDRQRQQPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTDDRLALPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWTELCGMCEAATERAPSCVETVTGVMWGLVRRAGPVVAAGVRATAAAXXXXPEAATQAGGRGPKPSADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAAAGAAVAGEXXXXXXXX-DLGLGRALVQAMEDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQASEGASAAGGKKREGR 2670
MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVVAQL ATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLS GAEAARSAEDQAELTRVVLPLLLKQMAYDPTALQQACVTLALEKQPATPGPAAGSAESSMDVDGEAG XXXXXXXXXXXXXXXXX XXX KGGGQEPAQG ESENDGAAG+DLE K+EG V DQPDRDAQLRWEWKL VAEPLKLTAEVMTNLCALASGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGALTAVLLEAMAEGGALQRTLATLQ LLAPTPRDRQR+QPTA XXXXXXXXXXXXXXXXXXXXXXXXXXXXNTDDRLALPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALW ELCGMCEAATERAPSCVETVTGVMWGLVRRAGPVVAAG RA XXXX PK SADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAAAGAAVAGE DLGLGRALVQAMEDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQASEG SAAGGKKREGR
Sbjct: 1 MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVAQLVATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSSGAEAARSAEDQAELTRVVLPLLLKQMAYDPTALQQACVTLALEKQPATPGPAAGSAESSMDVDGEAGXXXXXXXXXXXXXXXXXXETTTTGXXXGA-TKGGGQEPAQGTESENDGAAGNDLEGGEKKEEGGV-DQPDRDAQLRWEWKLTVAEPLKLTAEVMTNLCALASGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGALTAVLLEAMAEGGALQRTLATLQALLAPTPRDRQREQPTAAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTDDRLALPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWAELCGMCEAATERAPSCVETVTGVMWGLVRRAGPVVAAGFRAXXXXXXXXXX--XXXXXXXPKRSADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAAAGAAVAGEGAAAAGGGTDLGLGRALVQAMEDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQASEGVSAAGGKKREGR 816
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS0_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.000e-47 Identity = 275/841 (32.70%), Postives = 350/841 (41.62%), Query Frame = 1
Query: 232 GVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGES--------WAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGG--LQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVL------------------PLLLKQM-AYDPTALQQACVTLALEKQPATPGPAAGSAESSMDVDGEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGGQEPAQGAESENDGAAGDDLEXXXXKKEGAVVDQPDRDAQLRWEWKLAVAEPLKLTAEVMTNLCALAS--------GDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGALTAVLLEAMAEGGALQRTLATLQTLLAPTPRDRQRQQPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTDDRLALPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWTELCGMCEAATERAP--SCVETVTGVMWGLVRRAGPVVAAGVRATAAAXXXXPEAATQAGGRGPKPSADPLPLILRLCDPAVTRAFEARVNAVGMLGAL-GSAAAGAAVAGEXXXXXXXXDLGLGRALVQAMEDPHVLVQAEALNAVMDVYGDDGLDAA-FRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQASE 2631
G+LD L SL+ RESSC AIAS+F +D + G S W AA++L+ GLVK+LL R+VD VPGV++ A GA+RNISAV +P +CE +V D +T LT L+ + + QL L N+ VD AV FT GG + LL A+ S AL+ H AT+ N L R L A P A D ++AL+ PL+++ + AYD E + D E XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX ++ +A+L W+ A EP+ L AEV NL ALA GD E XXXXXXX SEG+ + +L+A+AE L R + L P +LA+LRA++A A+LV+ LPAK LG+ A W +C + + A A C+E +TG+MWGLVRR VA A + A L+ RL DPA T A E RVNAV ML AL G+AAAGA A L ALV+++ED H LVQA ALNA MDV+G D DAA F +G A+AA +P F+RKVK EG GR+A+CHLKET+LNA RFVKY ++ +
Sbjct: 33 GLLDNLKSLDPFVRESSCVAIASVFAHLDYQQTAGGSKRPANSANWGAARQLLQRGLVKRLLQRLVDPVPGVRVHAAGALRNISAVGEPALCEAMVGDGVVTTALTQLEGVLREGSPVAAEHAQA-----------------------------------IALQLLLLLSNIFEHVDAAVDSFTDGGGRGAACIAALLTAQAIASSPLHLAAALRLAHTATEGNAALCRALQAAPAAADALAALMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLVVRGLGAYDARLTH----------------------ELAARADAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXEEAKTEAELVEAWRDAAVEPVLLAAEVAANLAALAXXXXXXXXXGDCEWASDDEDGMEAEAATGGXXXXXXXGE----SEGS--SAILQALAEAQVLPRVIDALGAAALAPP--------------------------------------------XXXXXXXXXXAELAELRASLAATGASLVEALPAKGLGDIG-ATWRGVCALVDRAAADAALHDCLEPLTGMMWGLVRRVPSEVAGAGDAASGA------------------------LLQRLVDPAQTGAAEVRVNAVAMLAALAGAAAAGAGQAD------------LAAALVRSLEDSHPLVQAAALNAAMDVWGSDSGDAAVFARAGLLGAIAAMLPDFKRKVKAEGSTHGREALCHLKETSLNAARFVKYMRSQK 707
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: ARM (repeat-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLK3_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.810e-13 Identity = 90/337 (26.71%), Postives = 152/337 (45.10%), Query Frame = 1
Query: 106 MGKARRQKSHTQAARAAADAGTAVAKQQXXQQQPLQ-MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVLPLLLKQMAYD 1113
MGKA++ ++ + RA G + A+ + Q L M A + GL L RE++C AIA++F + EA S QR++ GL+KKL+PR+VD +P V+ A+GA+RN+S +CE++ + +TP++ ++ +T ++ Q A L NL + A+ T QG L + + A+G R + + L+ L + T+ N L+ +AA I AL+Q AD ++S +R++A G+ +N+ + ED +TR+V P+L +AYD
Sbjct: 1 MGKAKKLRTISHKKRAPPTGGPSTAELEELQAMDLSIMAADEVQLFKGLVDLQGAVREATCVAIATMFGDAESDEAEARSRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENATDTALNGSGDLRAVQ---------------------------------LLEQAVALLSNLCESCQAAINELT-QGELLPPIFKVAAQG-RVHTALHLETLKLLLLITEGNAQLNEVIAANSAYQQTIGALIQ-AD----QLSLQVRLEAVGIAMNL-------QTIMQVEDN--VTRIV-PVLEAALAYD 287
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXM1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.640e-13 Identity = 55/126 (43.65%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 2251 FEARVNAVGMLGALGSAAAGAAVAGEXXXXXXXXDLGLGRALVQAM-EDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQA 2625
FE RVN G+LG G GAA +G+ L +A+ + HVL A LNA+MD++G D LDA F+ L +PAFR K K E GRDA+ H+KETALN RF+KYKQ+
Sbjct: 8 FEVRVNVAGLLG--GCCPVGAAPR-------------VGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQS 118
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q4E3_PHYPN) HSP 1 Score: 84.0 bits (206), Expect = 8.190e-13 Identity = 88/338 (26.04%), Postives = 149/338 (44.08%), Query Frame = 1
Query: 106 MGKARRQKSHTQAARAAADAGTAVAKQQXXQQQPLQ-MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQG-ADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVLPLLLKQMAYD 1113
MGKA++ +S + RA G + A+ + Q L M A + GL L RE++C AIA++F V+ EA S QR++ GL+KKL+PR+VD +P V+ A+GA+RN+S +CE++ + +TP++ ++ +T A ++ Q A L NL + A+ T+ L + ++ A R + + L+ L + T+ N L+ + A I AL+Q AD ++S +R++A GV +N+ +A ED ++P+L +AYD
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQAMDLSTMAADEAQLFKGLVDLQGAVREATCVAIATMFGDVESDEAEATSRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENATDAALNGSGDLRAVQ---------------------------------LLEQAVALLGNLCESCQAAINELTQGDLLPPIFKI--AAQARTHTALHLETLKLLLLITEGNAQLNEIIGANTAYQQTIGALIQAPAD----QLSLQVRLEAVGVAMNL-------QAIMQVEDNVAR---MMPVLEAALAYD 289
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHW5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.430e-12 Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 106 MGKARRQKSHTQAARAAADAGTAVAKQQXXQQQPLQ-MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAA 552
MGKA++ +S + RA G A+ + Q Q M A + GL L RE++C A+A++F + EA S A QR++ GL++KL+PR+VD +P V+L A+GA+RN+S +CEV+ + +TP++ ++ +T A
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPTPAELEEAQAQDFSSMPADEAQLFRGLLDLQGSIREATCVALATMFGDAESEEAEVRSRAKLQRMVDAGLLRKLVPRVVDPLPMVRLHALGALRNMSVTGGLELCEVMTTQNVITPLVKVISESATDA 150
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBE2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.330e-12 Identity = 83/260 (31.92%), Postives = 110/260 (42.31%), Query Frame = 1
Query: 1882 LPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWTELCGMCEAATERAPS------------CVETVTGVMWGLVRRAGPVVAAGVRATAAAXXXXPEAATQAGGRGPKPSADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAAAGAAVAGEXXXXXXXXDLGLGRALVQAM-EDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQ 2622
LP + DLR L+ L L + WT L MCE E + VTG M +V+R + GGR + L L++R+ + + FE RVN G+LG G GAA +G+ L +A+ + HVL A LNA+MD++G D LDA F+ G L +PAFR K K E GRDA+ H+KETALN RF+KYKQ
Sbjct: 619 LPVPFIRQVLDLRVRAISVLGGLLHALSLAELEKEHGRAWTLLKNMCEEGMEEEERGHGPWYLPGEEPWLGLVTGAMDAVVQRG-----------------------REGGREWEWEEGDLVLLIRMLQRSSS--FEVRVNVAGLLG--GCCPVGAAPR-------------VGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELGMLPMLTNVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 838
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REG6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.260e-12 Identity = 77/291 (26.46%), Postives = 132/291 (45.36%), Query Frame = 1
Query: 244 GLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQG-ADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVLPLLLKQMAYD 1113
GL L RE++C A+AS+F V+ EA +S QR++ GL+ KL+PR+VD +P V+L A+GA+RN+S +CE++ + + +TP++ ++ +T ++ Q A L NL + A+ T+ L + ++ A R + + L+ L + T+ NE L+ Q+ A I A++Q AD ++S +R+ A G+ +NV +A ED + R+V P+L +AYD
Sbjct: 48 GLVDLQGSIREATCVALASMFGDVESDEAEAKSRKKLQRMVDAGLLNKLIPRVVDPLPMVRLHALGALRNMSVTGGLELCELMTNQNVVTPLVKIITENATDEALSGSGDVRGVQ---------------------------------LLEQALALLSNLCESCQAAINELTQGQLLPPIFKI--AGQARAHTVLHLETLKLLILITEGNERLNEQIGANKQYQQTIGAIIQAPAD----QLSLQIRLHAVGIAMNV-------QAIVQVEDN--VVRMV-PVLEYALAYD 289
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: HEAT (repeat-containing protein 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZID8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.260e-11 Identity = 79/296 (26.69%), Postives = 131/296 (44.26%), Query Frame = 1
Query: 238 LDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVAQLAATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSLGAEAARSAEDQAELTRVVLPLLLKQMAYDPTAL 1125
L GLTSL RE++C A+AS F D + E Q+++ GGL+KKLLPRMVD V+L ++GA+RNIS +CE + D +TP + L+ ST ++ Q+ + L NL + +A+ + T Q L V+ L+ + + A++ L V D+N + + ++A+P + L+Q + H S ++R+ A GV +N+ + D A+ ++LP+L +AYD A+
Sbjct: 44 LSGLTSLQGSVREATCVALASYFGGDD--QMSPEKAKLLQKMLNGGLLKKLLPRMVDHSKLVRLHSVGALRNISVAGGLDVCEYMTTQDVITPCVKLVGEYSTPEHLGAQQTVDVHAFQ-------------------------------ILEQVFSLLANLSESSALALHQITVQRSL-VLPALMRCLPVNAAPSMQLEAVKLLLVLGDNNPEWNASISAEPAHQQTLLQLIQSPE--H---SLNLRLTAVGVAINLPHVL----------DNAQAIALLLPVLKAAVAYDAVAV 290
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3F4_PHYRM) HSP 1 Score: 79.7 bits (195), Expect = 2.560e-11 Identity = 50/148 (33.78%), Postives = 82/148 (55.41%), Query Frame = 1
Query: 106 MGKARRQKSHTQAARAAADAGTAVAKQQXXQQQPLQ-MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMST 546
MGKA++ +S + RA G + A+ + Q M A + GL L RE++C AIA++F + EA S QR++ GL+KKL+PR+VD +P V+ A+GA+RN+S +CEV+ + +TP++ ++ +T
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQAMDFSVMAADEAQLFKGLVDLQGAVREATCVAIATMFGDAESDEAEAASRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCEVMTAQNVVTPLVKVITDNAT 148 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9496.17630.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9496.17630.1 >prot_Ecto-sp9_F_contig9496.17630.1 ID=prot_Ecto-sp9_F_contig9496.17630.1|Name=mRNA_Ecto-sp9_F_contig9496.17630.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=856bp MGKARRQKSHTQAARAAADAGTAVAKQQQEQQQPLQMDAKAGGVLDGLTSback to top mRNA from alignment at Ecto-sp9_F_contig9496:1096..4457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9496.17630.1 ID=mRNA_Ecto-sp9_F_contig9496.17630.1|Name=mRNA_Ecto-sp9_F_contig9496.17630.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3362bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9496:1096..4457+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9496:1096..4457+ >mRNA_Ecto-sp9_F_contig9496.17630.1 ID=mRNA_Ecto-sp9_F_contig9496.17630.1|Name=mRNA_Ecto-sp9_F_contig9496.17630.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5136bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9496:1096..4457+ (Ectocarpus species9 EcSCA_722f female)back to top |