mRNA_Ecto-sp9_F_contig935.17509.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Ofd1_CTDD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G882_ECTSI) HSP 1 Score: 270 bits (690), Expect = 3.330e-86 Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 2
Query: 2 EYMVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKENGTADPGEGVXXXXXXXXXKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGEE 568
EYMVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SDKENGTADPGEGVXXXXXXXXXKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGEE
Sbjct: 216 EYMVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKENGTADPGEGVXXXXXXXXXKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGEE 404
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM5_9PHAE) HSP 1 Score: 259 bits (663), Expect = 2.040e-79 Identity = 143/188 (76.06%), Postives = 144/188 (76.60%), Query Frame = 2
Query: 2 EYMVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKENGTADPGEGVXXXXXXXXXKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGE 565
EYMVLDA LCFVDDREPYKEAAWRQDEVGGYVTYLGG DK+NGTADPGEGV KNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGE
Sbjct: 516 EYMVLDATLCFVDDREPYKEAAWRQDEVGGYVTYLGGDDDEEEGEKKDSRI--------------------DKDNGTADPGEGVVAGGGGRGQKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEGSFGAPGGVLDTVPEGHSGE 683
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Oxoglutarate (and iron-dependent oxygenase degradation C-term-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDD7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.670e-21 Identity = 88/187 (47.06%), Postives = 99/187 (52.94%), Query Frame = 2
Query: 8 MVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKENGTAD-PGEGVXXXXXXXXXKNDAAVYKADEGGSLIS---------VSAASNAL--------------------------SLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVA 460
+VLDA LCFVDD+EPYKEAAW QDEVGGY TYLGG XXXXXXXXXXXXX G D G+ V DAAVYKADEGGS++S V AA+NA+ LRDD + SF+KYVS+AAPGSRYDV EY+VA
Sbjct: 549 LVLDAVLCFVDDKEPYKEAAWVQDEVGGYHTYLGGDDGDDGGAEAEGXXXXXXXXXXXXX-------------GAPDYKGDEVGSLLYQAP---DAAVYKADEGGSMLSAXXXXXXXSVCAANNAVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDDAEVLSFIKYVSAAAPGSRYDVAAEYVVA 719
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAV9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.010e-10 Identity = 52/166 (31.33%), Postives = 74/166 (44.58%), Query Frame = 2
Query: 11 VLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKENGTADPGEGVXXXXXXXXXKNDAAVYKADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEG 508
VLDA +CFV D Y A W ++GG+ Y+ D E+G D ++ Y D+ L+SVSA++N LSLV RD + FVKYVSS+AP SRYD+ EY + ++DG ED++ ++G
Sbjct: 523 VLDATMCFVRDTTEYDTAMWESGDIGGFECYI-----------EADIDEDEDMDMQDGGDGSSQQQPVDGESGATDAAAASKPSSKGHQAADE---YNEDDDTELLSVSASNNTLSLVYRDPGTMR-FVKYVSSSAPSSRYDICMEYELP-PDDDDGGEDTNDADG 672
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YP49_9FUNG) HSP 1 Score: 62.0 bits (149), Expect = 8.270e-8 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 2
Query: 281 KNDAAVYK---ADEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEY 451
+ D AVYK A++ G+L+++SA SN LSLVLRD+E + F KYVSS APGSR+DV EY
Sbjct: 483 EEDPAVYKSAPAEDDGALLTISAGSNVLSLVLRDEE-VMKFTKYVSSLAPGSRWDVAFEY 541
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8X5_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 2.050e-7 Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 2
Query: 287 DAAVYKA---DEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEY 451
D AVYK+ DE G+L+++SA N LSLVLRD+E + F KY+SS APGSR+DV EY
Sbjct: 485 DPAVYKSAAPDEDGALLTISAGCNVLSLVLRDEE-VMKFTKYISSLAPGSRWDVAFEY 541
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PV40_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 2.050e-7 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query: 281 KNDAAVYKA-DEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSEG 508
+ D A YKA DE G+L+++SAASN LS+VLRD E + F+KYVS+ APG R+D+ EY + ED +D +EG
Sbjct: 482 EEDPATYKAADEDGALLTLSAASNTLSIVLRD-EGVMRFIKYVSARAPGCRWDISLEYDL----PEDAEDDDDENEG 553
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7BV15_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 3.830e-7 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 2
Query: 281 KNDAAVYKADEGGS---LISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDGAEDSSSSE 505
KND AVYKAD+ G L + A+ N LSLVLRD + FVKYVS AAPG R+D G + V G+ +G E SE
Sbjct: 513 KNDPAVYKADDDGDDGILFTYPASWNTLSLVLRDRGTMR-FVKYVSKAAPGDRWDCTGAFGVLDDGDSEGEESEGESE 589
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: uncharacterized (protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019080324) HSP 1 Score: 58.9 bits (141), Expect = 9.310e-7 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 2
Query: 308 DEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEEDG 481
D G+L++V A N L LVLRD E + FVKYVS+AAPGSR+D+ GEY V GE DG
Sbjct: 497 DGEGTLLTVQAQFNRLLLVLRD-EGVLRFVKYVSAAAPGSRWDICGEYSVDTFGEADG 553
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Match: Oxoglutarate (and iron-dependent oxygenase degradation C-term-domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IRW1_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 2.280e-6 Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 2
Query: 281 KNDAAVYKA-DEGGSLISVSAASNALSLVLRDDEAITSFVKYVSSAAPGSRYDVVGEYLVACTGEED 478
+ D AVY+ D+ G+L++VSA N L+LVLRD + FVKYVS+AAPGSR+DV EY + EED
Sbjct: 471 EEDPAVYRQMDDDGALLTVSAGWNVLTLVLRDP-GLLKFVKYVSAAAPGSRWDVAFEYDLPPDEEED 536 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig935.17509.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig935.17509.1 >prot_Ecto-sp9_F_contig935.17509.1 ID=prot_Ecto-sp9_F_contig935.17509.1|Name=mRNA_Ecto-sp9_F_contig935.17509.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp MVLDAALCFVDDREPYKEAAWRQDEVGGYVTYLGGDDDEEEEEKEGSRSGback to top mRNA from alignment at Ecto-sp9_F_contig935:977..1580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig935.17509.1 ID=mRNA_Ecto-sp9_F_contig935.17509.1|Name=mRNA_Ecto-sp9_F_contig935.17509.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=604bp|location=Sequence derived from alignment at Ecto-sp9_F_contig935:977..1580+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig935:977..1580+ >mRNA_Ecto-sp9_F_contig935.17509.1 ID=mRNA_Ecto-sp9_F_contig935.17509.1|Name=mRNA_Ecto-sp9_F_contig935.17509.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1194bp|location=Sequence derived from alignment at Ecto-sp9_F_contig935:977..1580+ (Ectocarpus species9 EcSCA_722f female)back to top |