mRNA_Ecto-sp9_F_contig927.17430.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ3_ECTSI) HSP 1 Score: 222 bits (566), Expect = 1.400e-67 Identity = 149/255 (58.43%), Postives = 164/255 (64.31%), Query Frame = 1
Query: 232 MAAALQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEAR 996
MAAALQKLQNQNA+LLEAVEEKSRQ+ E RG L R + + A R + CL V + + R + S+A ++T + + G +QQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGR LNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEA+
Sbjct: 1 MAAALQKLQNQNAMLLEAVEEKSRQLPE---------------------------SASRGGRLGERANGVSKTAGDRVIRSTSVGYPAGGCL-------VFSPD----RWKRRTPSTAASTIETYHHKL-----MRGTCTPAKQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRTLNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEAK 212
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: CCDC13 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7Q1_SYMMI) HSP 1 Score: 96.3 bits (238), Expect = 5.240e-19 Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1
Query: 421 DYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDG---NEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
DYRD KI+ LAK+ R+ L KER + + + + +R+L++VSS R A S +R D + +L++Q+ LR KL +Q+E KK RAL+KE+G + + +A++D GW+GRAQQIVMLKA VK+L+ G+ G G TR G +DVD++A+EE+ M R A+E L
Sbjct: 1 DYRDTKIVSLAKKCRNLTRSLNKERGLNQSIKDKINTRQDDNGRLKRELDLVSSPAARAAATRARESKGSRGDAPSKDSAQLQKQVEDLRRKLTASQDETKKLSRALAKELG-EGVSVEQAVDD--GWRGRAQQIVMLKAKVKRLEA----GQTSGGVGRTR---GTRDVDAKAEEELQSMSAERQQAVEAL 182
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST90_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.760e-18 Identity = 92/272 (33.82%), Postives = 138/272 (50.74%), Query Frame = 1
Query: 253 LQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPR-------LDTQPADVSSSARID---GNEER--------LRQ---QIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDT---GGWKGRAQQIVMLKATVKQLQTQLRNG---RDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
L +N+ L + + ++ QV +LG ++EALEPVPG+D L +L G D + D RDVKI+QLAK+ R+ + K ++ + EA +E+ + +Q+ ++S R + T P D +S + D G E+R LR+ ++V R ++ +A EE KK L KE+G L G A+ GW+GRA+ IV+L++ VK+LQ L RDP + Q DVD A +EI ME R A EQL
Sbjct: 16 LAQENSKLSQELADRRLQVKKLGVMLEALEPVPGVDAERLLDLLE-GQDV---AEADPRDVKIVQLAKKSRNLMLENNKLKSQLRAQQTEAAAKDREIESLNKQMAAMASPAAREVIMKQLIGTHPKDEASEKQRDEGEGKEDRSPSFASAQLRRKDREVVEARQRVAKATEEAKKLKNLLHKELG---LAEGEAIPQKVFEDGWRGRAETIVLLRSKVKKLQGDLEAATGRRDPKMAA-----QSHHDVDRMAAQEIADMEGERRRATEQL 275
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U590_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.900e-18 Identity = 82/259 (31.66%), Postives = 126/259 (48.65%), Query Frame = 1
Query: 241 ALQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPR-----LDTQPADVSSSARIDGN-----------------EERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGR--DPGQSGETRSKQGRKDVDSQAQEEI 945
A+ QN L+ + K+RQ+ L LV AL+P+PG+D + +L GD G+DLD RD KI++L+K++R + L++ER A R+ E+ R QL+ V+S R + T+ SS D + +R Q L++KL + E + L +E+G L + GW+GRAQQI +LK VK+L+ +LRNG PG RS+ KDVD++A+ +
Sbjct: 34 AVTAAHQQNQALVAELSAKTRQIETLEALVAALKPLPGMDVAKYREMLESAGD-GHGEDLDVRDAKIVELSKKMRGVNVALQRERDRSRAAARQVAGKDAEIELLREQLDAVASPAVRNKLRHMQTEARRRGSSIEADASIVSPAEVVEQAQKAMKDAAAVRSQNDELKHKLEVQRIENNQLNTTLKREIGDGDLFNAAIAGE--GWRGRAQQITLLKTKVKRLERELRNGGHGSPGTQNFQRSRDA-KDVDARAEAHV 288
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.320e-18 Identity = 76/205 (37.07%), Postives = 110/205 (53.66%), Query Frame = 1
Query: 244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQL 858
+Q L+ QN+ L+ +++ RQV EL L+E +EP+PGLD N+ VL G D D D RDVKI+ +AK++R L KER A + + E + Q +++ S Q + S +ID + ++ LR K E+KKT RAL +EVG + L L+ G +GRAQQIVMLKA VK+L+ +L
Sbjct: 75 IQALKLQNSELVATIKDLKRQVAELEVLLEGVEPIPGLDINSLKDVLQ-GADI---VDHDIRDVKIVHMAKKLRQTKVTLTKERNKAAGA--SSRIAELEQALHQAQEDLLRSQRQVHKLQLGEKPSEPKIDLSSVVPVKKFDELRVKFEAQTIELKKTQRALQREVG-EDVPLAELLDGESGKRGRAQQIVMLKAKVKKLEKEL 272
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNI5_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.340e-16 Identity = 81/237 (34.18%), Postives = 127/237 (53.59%), Query Frame = 1
Query: 244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKEL-VACRRQLEIVSSAGPRLDTQPADVSSSAR-IDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRAL-NDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEI 945
+Q+L+ N+ LL +++ + +Q+ EL L+EA+EP+PG+D AF +L D D RDVKI+ AK+IR KE+ + L K + VA QL+ + +L +P +S+ + I + + ++ L+ K+ E+KKT RAL +EVG + L + ++ G +GRAQQIVMLKA +K+L+ R D + ET KDVD +AQEE+
Sbjct: 76 IQQLKQHNSELLASIKTQKQQIAELQLLLEAVEPLPGVDVEAFRDILQGSEVVDH----DIRDVKIVHQAKKIRQVTLAYNKEKNRAAAVTTKMTELEKAVEVAQHAQLKAERALQKQLLNEPKKISTDEKEISAS---MAKKFEELKAKVDSQTFELKKTQRALLREVG-DDVSLSEIIESNESGKRGRAQQIVMLKAKIKKLE---RAAADSSNNQETTKT---KDVDQKAQEEL 298
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1K6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.680e-16 Identity = 86/231 (37.23%), Postives = 123/231 (53.25%), Query Frame = 1
Query: 280 EAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKL----EKERASCLKARR---EADVLAKELVACRRQLEIVSSAGPRLDTQ-PADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTG-GWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEI 945
+ + +K +QV ++EAL PVPG++P + ++ G ++D RD KIIQLAK+ R+ L EK R L R +A LAKEL A R L+ ++ P + Q PA + + E R ++ LR+KL + E K RAL +EVG L AL + G GWKGRAQQIVMLK V++L+ R+ +SG R + R+DVD+ AQ E+
Sbjct: 160 DELRQKRQQVKNYQVMLEALAPVPGVNPETIYAGIN-------GAEVDVRDAKIIQLAKKARNYTVALASEREKNRKLALDFERLKIDATALAKELKA-RGPLDPDAARYPFQENQAPAKEAPVTKASQRERRAEKRSAELRHKLETERAETDKLRRALVREVGDK---LEDALANEGEGWKGRAQQIVMLKNKVRRLE------REVSESG-VRKRPPRRDVDAVAQREL 372
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R3B0_SAPDV) HSP 1 Score: 89.4 bits (220), Expect = 5.910e-16 Identity = 71/204 (34.80%), Postives = 108/204 (52.94%), Query Frame = 1
Query: 244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPA-DVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDT-GGWKGRAQQIVMLKATVKQLQ 849
+Q L++QNA L+ A++ +Q+ EL L+EALEP+PGLD +AF +L D D R+VKI+ AK++R KE+ A + + + + A + A RL QP DV+ E +++ L+ K E+K+T RAL +EVG + L L+ + G +GRAQQIVMLKA +K+L+
Sbjct: 70 IQSLKHQNAELVAAIKSHKQQINELQLLLEALEPIPGLDVDAFKDILQGSEIVDH----DIRNVKIVHQAKKLRQATLAYNKEKTRAAAASTKMAEMERAVEAAQTLQLKAERALQRLQQQPRPDVAKKVPSPEKEVAASKKLEELKLKCEAQAVELKRTQRALQREVG-DDVALSDILDASDSGKRGRAQQIVMLKAKIKKLE 268
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1T7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.880e-15 Identity = 89/272 (32.72%), Postives = 130/272 (47.79%), Query Frame = 1
Query: 244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARR--------------EADVLAKEL--VACRRQLEIVSSAGPRLDTQPADVSSSARID-GNEERLRQQIV-LLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGW------KGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
LQ+L N NA L + +QV L +EA PVPGL+ +A +L + D D RDVKI+ AK +R L++E+ A + E D L +L R E +++ G Q + + +R D GN+ Q + L++K Q+E+KKT RAL +EVG + L + +T +GRAQQI MLKA VK+LQT+L R S ET DVD +AQ+++ + HR ++QL
Sbjct: 103 LQELTNANATLTSEARDLRQQVKALQIQLEAQAPVPGLNVDAVQDILLEKDNLDH----DVRDVKIVHQAKTLRTLKRSLQREKQQAADAAKQSQALETANKQLEEEVDTLKLKLQRFQARAAAEKINNNGAVTQPQRPESPTESRSDTGNDSGSLQNLCDELKSKNTTLQQELKKTQRALVREVG-DDVSLEEIIGNTDSTVSGASRRGRAQQIFMLKAKVKKLQTRLATMRPGTTSTETHDSGNVLDVDKRAQQDLSGQQMHRQKLLDQL 369
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Y5N2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.460e-15 Identity = 76/236 (32.20%), Postives = 114/236 (48.31%), Query Frame = 1
Query: 244 LQKLQNQNAILLEAVEEKSRQVLELGT---------------LVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACR------RQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSG 888
+Q LQ +N+ L+ +++ QV E G ++EA+EP+PGLD N+ VL D D RDVKI+ AK++R L KE+ A L K+L ++L G + + +P +++ + E+ LR K A E+KKT RAL +EVG + L L+ GG +GRAQQIVMLKA VK+L+ +L++ +P G
Sbjct: 50 IQALQLKNSELVATIKDYKHQVTEYGLCLISFCGLCVCRLQLMLEAMEPIPGLDVNSLRDVLQGAEVVDH----DIRDVKIVHQAKKLRQAKIALNKEKVKGAGASGRIAELEKQLHDAEENYHKSQRLVHKLQLGEKPEPKPEATTNTVPLKKFED--------LRVKYEAATIELKKTQRALQREVG-DDVPLADVLDGEGGKRGRAQQIVMLKAKVKKLEKELQSRSEPDTVG 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig927.17430.1 >prot_Ecto-sp9_F_contig927.17430.1 ID=prot_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=336bp MEQAQQPASSVMELEYDPAGLALKYGVEGGVLDSELDDNSSDSNNGDIVPback to top mRNA from alignment at Ecto-sp9_F_contig927:1564..4864- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig927.17430.1 ID=mRNA_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3301bp|location=Sequence derived from alignment at Ecto-sp9_F_contig927:1564..4864- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig927:1564..4864- >mRNA_Ecto-sp9_F_contig927.17430.1 ID=mRNA_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2016bp|location=Sequence derived from alignment at Ecto-sp9_F_contig927:1564..4864- (Ectocarpus species9 EcSCA_722f female)back to top |