mRNA_Ecto-sp9_F_contig927.17430.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig927.17430.1
Unique NamemRNA_Ecto-sp9_F_contig927.17430.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ3_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 1.400e-67
Identity = 149/255 (58.43%), Postives = 164/255 (64.31%), Query Frame = 1
Query:  232 MAAALQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEAR 996
            MAAALQKLQNQNA+LLEAVEEKSRQ+ E                              RG  L  R   + + A     R   +      CL       V + +    R +    S+A   ++T    +     + G     +QQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGR LNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEA+
Sbjct:    1 MAAALQKLQNQNAMLLEAVEEKSRQLPE---------------------------SASRGGRLGERANGVSKTAGDRVIRSTSVGYPAGGCL-------VFSPD----RWKRRTPSTAASTIETYHHKL-----MRGTCTPAKQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRTLNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQLEAK 212          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: CCDC13 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7Q1_SYMMI)

HSP 1 Score: 96.3 bits (238), Expect = 5.240e-19
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  421 DYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDG---NEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
            DYRD KI+ LAK+ R+    L KER      + + +    +    +R+L++VSS   R     A  S  +R D    +  +L++Q+  LR KL  +Q+E KK  RAL+KE+G   + + +A++D  GW+GRAQQIVMLKA VK+L+     G+  G  G TR   G +DVD++A+EE+  M   R  A+E L
Sbjct:    1 DYRDTKIVSLAKKCRNLTRSLNKERGLNQSIKDKINTRQDDNGRLKRELDLVSSPAARAAATRARESKGSRGDAPSKDSAQLQKQVEDLRRKLTASQDETKKLSRALAKELG-EGVSVEQAVDD--GWRGRAQQIVMLKAKVKRLEA----GQTSGGVGRTR---GTRDVDAKAEEELQSMSAERQQAVEAL 182          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST90_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.760e-18
Identity = 92/272 (33.82%), Postives = 138/272 (50.74%), Query Frame = 1
Query:  253 LQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPR-------LDTQPADVSSSARID---GNEER--------LRQ---QIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDT---GGWKGRAQQIVMLKATVKQLQTQLRNG---RDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
            L  +N+ L + + ++  QV +LG ++EALEPVPG+D    L +L  G D     + D RDVKI+QLAK+ R+   +  K ++     + EA    +E+ +  +Q+  ++S   R       + T P D +S  + D   G E+R        LR+   ++V  R ++ +A EE KK    L KE+G   L  G A+       GW+GRA+ IV+L++ VK+LQ  L      RDP  +      Q   DVD  A +EI  ME  R  A EQL
Sbjct:   16 LAQENSKLSQELADRRLQVKKLGVMLEALEPVPGVDAERLLDLLE-GQDV---AEADPRDVKIVQLAKKSRNLMLENNKLKSQLRAQQTEAAAKDREIESLNKQMAAMASPAAREVIMKQLIGTHPKDEASEKQRDEGEGKEDRSPSFASAQLRRKDREVVEARQRVAKATEEAKKLKNLLHKELG---LAEGEAIPQKVFEDGWRGRAETIVLLRSKVKKLQGDLEAATGRRDPKMAA-----QSHHDVDRMAAQEIADMEGERRRATEQL 275          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U590_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.900e-18
Identity = 82/259 (31.66%), Postives = 126/259 (48.65%), Query Frame = 1
Query:  241 ALQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPR-----LDTQPADVSSSARIDGN-----------------EERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGR--DPGQSGETRSKQGRKDVDSQAQEEI 945
            A+     QN  L+  +  K+RQ+  L  LV AL+P+PG+D   +  +L   GD   G+DLD RD KI++L+K++R  +  L++ER     A R+      E+   R QL+ V+S   R     + T+     SS   D +                    +R Q   L++KL   + E  +    L +E+G   L       +  GW+GRAQQI +LK  VK+L+ +LRNG    PG     RS+   KDVD++A+  +
Sbjct:   34 AVTAAHQQNQALVAELSAKTRQIETLEALVAALKPLPGMDVAKYREMLESAGD-GHGEDLDVRDAKIVELSKKMRGVNVALQRERDRSRAAARQVAGKDAEIELLREQLDAVASPAVRNKLRHMQTEARRRGSSIEADASIVSPAEVVEQAQKAMKDAAAVRSQNDELKHKLEVQRIENNQLNTTLKREIGDGDLFNAAIAGE--GWRGRAQQITLLKTKVKRLERELRNGGHGSPGTQNFQRSRDA-KDVDARAEAHV 288          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.320e-18
Identity = 76/205 (37.07%), Postives = 110/205 (53.66%), Query Frame = 1
Query:  244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQL 858
            +Q L+ QN+ L+  +++  RQV EL  L+E +EP+PGLD N+   VL  G D     D D RDVKI+ +AK++R     L KER     A   + +   E    + Q +++ S       Q  +  S  +ID +     ++   LR K      E+KKT RAL +EVG   + L   L+   G +GRAQQIVMLKA VK+L+ +L
Sbjct:   75 IQALKLQNSELVATIKDLKRQVAELEVLLEGVEPIPGLDINSLKDVLQ-GADI---VDHDIRDVKIVHMAKKLRQTKVTLTKERNKAAGA--SSRIAELEQALHQAQEDLLRSQRQVHKLQLGEKPSEPKIDLSSVVPVKKFDELRVKFEAQTIELKKTQRALQREVG-EDVPLAELLDGESGKRGRAQQIVMLKAKVKKLEKEL 272          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNI5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.340e-16
Identity = 81/237 (34.18%), Postives = 127/237 (53.59%), Query Frame = 1
Query:  244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKEL-VACRRQLEIVSSAGPRLDTQPADVSSSAR-IDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRAL-NDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEI 945
            +Q+L+  N+ LL +++ + +Q+ EL  L+EA+EP+PG+D  AF  +L      D     D RDVKI+  AK+IR       KE+        +   L K + VA   QL+   +   +L  +P  +S+  + I  +   + ++   L+ K+     E+KKT RAL +EVG   + L   + ++  G +GRAQQIVMLKA +K+L+   R   D   + ET      KDVD +AQEE+
Sbjct:   76 IQQLKQHNSELLASIKTQKQQIAELQLLLEAVEPLPGVDVEAFRDILQGSEVVDH----DIRDVKIVHQAKKIRQVTLAYNKEKNRAAAVTTKMTELEKAVEVAQHAQLKAERALQKQLLNEPKKISTDEKEISAS---MAKKFEELKAKVDSQTFELKKTQRALLREVG-DDVSLSEIIESNESGKRGRAQQIVMLKAKIKKLE---RAAADSSNNQETTKT---KDVDQKAQEEL 298          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1K6_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.680e-16
Identity = 86/231 (37.23%), Postives = 123/231 (53.25%), Query Frame = 1
Query:  280 EAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKL----EKERASCLKARR---EADVLAKELVACRRQLEIVSSAGPRLDTQ-PADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTG-GWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEI 945
            + + +K +QV     ++EAL PVPG++P    + ++       G ++D RD KIIQLAK+ R+    L    EK R   L   R   +A  LAKEL A R  L+  ++  P  + Q PA  +   +    E R  ++   LR+KL   + E  K  RAL +EVG     L  AL + G GWKGRAQQIVMLK  V++L+      R+  +SG  R +  R+DVD+ AQ E+
Sbjct:  160 DELRQKRQQVKNYQVMLEALAPVPGVNPETIYAGIN-------GAEVDVRDAKIIQLAKKARNYTVALASEREKNRKLALDFERLKIDATALAKELKA-RGPLDPDAARYPFQENQAPAKEAPVTKASQRERRAEKRSAELRHKLETERAETDKLRRALVREVGDK---LEDALANEGEGWKGRAQQIVMLKNKVRRLE------REVSESG-VRKRPPRRDVDAVAQREL 372          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R3B0_SAPDV)

HSP 1 Score: 89.4 bits (220), Expect = 5.910e-16
Identity = 71/204 (34.80%), Postives = 108/204 (52.94%), Query Frame = 1
Query:  244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLDTQPA-DVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDT-GGWKGRAQQIVMLKATVKQLQ 849
            +Q L++QNA L+ A++   +Q+ EL  L+EALEP+PGLD +AF  +L      D     D R+VKI+  AK++R       KE+     A  +   + + + A +        A  RL  QP  DV+        E    +++  L+ K      E+K+T RAL +EVG   + L   L+ +  G +GRAQQIVMLKA +K+L+
Sbjct:   70 IQSLKHQNAELVAAIKSHKQQINELQLLLEALEPIPGLDVDAFKDILQGSEIVDH----DIRNVKIVHQAKKLRQATLAYNKEKTRAAAASTKMAEMERAVEAAQTLQLKAERALQRLQQQPRPDVAKKVPSPEKEVAASKKLEELKLKCEAQAVELKRTQRALQREVG-DDVALSDILDASDSGKRGRAQQIVMLKAKIKKLE 268          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1T7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.880e-15
Identity = 89/272 (32.72%), Postives = 130/272 (47.79%), Query Frame = 1
Query:  244 LQKLQNQNAILLEAVEEKSRQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARR--------------EADVLAKEL--VACRRQLEIVSSAGPRLDTQPADVSSSARID-GNEERLRQQIV-LLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGW------KGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRSKQGRKDVDSQAQEEIHYMERHRGHAIEQL 987
            LQ+L N NA L     +  +QV  L   +EA  PVPGL+ +A   +L    + D     D RDVKI+  AK +R     L++E+     A +              E D L  +L     R   E +++ G     Q  +  + +R D GN+    Q +   L++K    Q+E+KKT RAL +EVG   + L   + +T         +GRAQQI MLKA VK+LQT+L   R    S ET       DVD +AQ+++   + HR   ++QL
Sbjct:  103 LQELTNANATLTSEARDLRQQVKALQIQLEAQAPVPGLNVDAVQDILLEKDNLDH----DVRDVKIVHQAKTLRTLKRSLQREKQQAADAAKQSQALETANKQLEEEVDTLKLKLQRFQARAAAEKINNNGAVTQPQRPESPTESRSDTGNDSGSLQNLCDELKSKNTTLQQELKKTQRALVREVG-DDVSLEEIIGNTDSTVSGASRRGRAQQIFMLKAKVKKLQTRLATMRPGTTSTETHDSGNVLDVDKRAQQDLSGQQMHRQKLLDQL 369          
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Y5N2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.460e-15
Identity = 76/236 (32.20%), Postives = 114/236 (48.31%), Query Frame = 1
Query:  244 LQKLQNQNAILLEAVEEKSRQVLELGT---------------LVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQLAKRIRDRDAKLEKERASCLKARREADVLAKELVACR------RQLEIVSSAGPRLDTQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSG 888
            +Q LQ +N+ L+  +++   QV E G                ++EA+EP+PGLD N+   VL      D     D RDVKI+  AK++R     L KE+     A      L K+L          ++L      G + + +P   +++  +   E+        LR K   A  E+KKT RAL +EVG   + L   L+  GG +GRAQQIVMLKA VK+L+ +L++  +P   G
Sbjct:   50 IQALQLKNSELVATIKDYKHQVTEYGLCLISFCGLCVCRLQLMLEAMEPIPGLDVNSLRDVLQGAEVVDH----DIRDVKIVHQAKKLRQAKIALNKEKVKGAGASGRIAELEKQLHDAEENYHKSQRLVHKLQLGEKPEPKPEATTNTVPLKKFED--------LRVKYEAATIELKKTQRALQREVG-DDVPLADVLDGEGGKRGRAQQIVMLKAKVKKLEKELQSRSEPDTVG 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig927.17430.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.400e-6758.43protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
CCDC135.240e-1939.06protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Hypothetical3.760e-1833.82protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical5.900e-1831.66protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized6.320e-1837.07protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized1.340e-1634.18protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
Hypothetical3.680e-1637.23protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized5.910e-1634.80protein n=1 Tax=Saprolegnia diclina (strain VS20) ... [more]
Uncharacterized2.880e-1532.72protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3... [more]
Uncharacterized9.460e-1532.20protein n=1 Tax=Aphanomyces invadans TaxID=157072 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig927contigEcto-sp9_F_contig927:1564..4864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.5
Seed ortholog evalue5.2e-14
Seed eggNOG ortholog4792.ETI50901
EggNOG OGs2CYMU@1,2S577@2759,3QC4B@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_000930.1
Exons8
Model size1008
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig927.17430.1prot_Ecto-sp9_F_contig927.17430.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig927 1564..4864 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931003.3809984-CDS-Ecto-sp9_F_contig927:1563..17011622931003.3809984-CDS-Ecto-sp9_F_contig927:1563..1701Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 1564..1701 -
1692278988.5177906-CDS-Ecto-sp9_F_contig927:1563..17011692278988.5177906-CDS-Ecto-sp9_F_contig927:1563..1701Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 1564..1701 -
1622931003.3950024-CDS-Ecto-sp9_F_contig927:1834..20381622931003.3950024-CDS-Ecto-sp9_F_contig927:1834..2038Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 1835..2038 -
1692278988.5303845-CDS-Ecto-sp9_F_contig927:1834..20381692278988.5303845-CDS-Ecto-sp9_F_contig927:1834..2038Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 1835..2038 -
1622931003.412687-CDS-Ecto-sp9_F_contig927:2404..24731622931003.412687-CDS-Ecto-sp9_F_contig927:2404..2473Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 2405..2473 -
1692278988.540834-CDS-Ecto-sp9_F_contig927:2404..24731692278988.540834-CDS-Ecto-sp9_F_contig927:2404..2473Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 2405..2473 -
1622931003.4269447-CDS-Ecto-sp9_F_contig927:2653..27501622931003.4269447-CDS-Ecto-sp9_F_contig927:2653..2750Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 2654..2750 -
1692278988.5510848-CDS-Ecto-sp9_F_contig927:2653..27501692278988.5510848-CDS-Ecto-sp9_F_contig927:2653..2750Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 2654..2750 -
1622931003.4451246-CDS-Ecto-sp9_F_contig927:3074..32681622931003.4451246-CDS-Ecto-sp9_F_contig927:3074..3268Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 3075..3268 -
1692278988.5602326-CDS-Ecto-sp9_F_contig927:3074..32681692278988.5602326-CDS-Ecto-sp9_F_contig927:3074..3268Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 3075..3268 -
1622931003.4658568-CDS-Ecto-sp9_F_contig927:3558..37191622931003.4658568-CDS-Ecto-sp9_F_contig927:3558..3719Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 3559..3719 -
1692278988.5698676-CDS-Ecto-sp9_F_contig927:3558..37191692278988.5698676-CDS-Ecto-sp9_F_contig927:3558..3719Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 3559..3719 -
1622931003.4798381-CDS-Ecto-sp9_F_contig927:4036..41421622931003.4798381-CDS-Ecto-sp9_F_contig927:4036..4142Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 4037..4142 -
1692278988.5802252-CDS-Ecto-sp9_F_contig927:4036..41421692278988.5802252-CDS-Ecto-sp9_F_contig927:4036..4142Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 4037..4142 -
1622931003.491778-CDS-Ecto-sp9_F_contig927:4825..48641622931003.491778-CDS-Ecto-sp9_F_contig927:4825..4864Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 4826..4864 -
1692278988.5955646-CDS-Ecto-sp9_F_contig927:4825..48641692278988.5955646-CDS-Ecto-sp9_F_contig927:4825..4864Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig927 4826..4864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig927.17430.1

>prot_Ecto-sp9_F_contig927.17430.1 ID=prot_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=336bp
MEQAQQPASSVMELEYDPAGLALKYGVEGGVLDSELDDNSSDSNNGDIVP
GVNGCSRPEDPAPSGVAGDNVARLSGGMAAALQKLQNQNAILLEAVEEKS
RQVLELGTLVEALEPVPGLDPNAFLSVLHCGGDTDRGKDLDYRDVKIIQL
AKRIRDRDAKLEKERASCLKARREADVLAKELVACRRQLEIVSSAGPRLD
TQPADVSSSARIDGNEERLRQQIVLLRNKLHEAQEEVKKTYRALSKEVGG
TSLGLGRALNDTGGWKGRAQQIVMLKATVKQLQTQLRNGRDPGQSGETRS
KQGRKDVDSQAQEEIHYMERHRGHAIEQLEARKKR*
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mRNA from alignment at Ecto-sp9_F_contig927:1564..4864-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig927.17430.1 ID=mRNA_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3301bp|location=Sequence derived from alignment at Ecto-sp9_F_contig927:1564..4864- (Ectocarpus species9 EcSCA_722f female)
ATGGAGCAAGCACAGCAACCAGCGTCGAGCGTCATGGAGGTGTGTGTTCG CCTCTCTTGTACTTCGTGGTACATAGACTACTGCTGCTGCTGTTATTGTC GCAGATTGTTATGTTTTGCAATCTTTGCATGCATTTATGCTTATCTTGAA TTTGATTGTGTTTTTGTGCGCATGTACGACCATGCATATGCACACTTGGG TTTGGATCACGTGGATTCACACTGGATCCGCGCAACTGGATACAGAGTGT GTGAGCAAAAATCCATTTCTCTCTCTCGTGGACGTGAGGTGCTGCCACCG CAATCTGGGGGTCGTTATGTTTGTCACCGAGGTGTGCACGGTATCTATGT ACCGCCAGCCGTACGACAGTGTAAAATACACTATCGTATTTGCATGCTAC AACACATGCTTAACTCTACACGATATCTTTGACCTTTGACCCCCGTGGTT TAGATATTACTGGTGGAATATTCAGCGGTTGCAGTGGTCGGGGTCGACGG ACGCTGGTTGACCAGACTAACTTGATTATTGAGCCACTGTTCATGTTATC CCCACTCTCTTGCAGTCGGATACGGTACGTATGCCGACTATCAGTCACTC CGATACGTCCGCGGGGACGGTTGATTTCGCCGTCCCGTCTTAATTCGTTG AACTGGCAACGTTGTTGACAATCCGTTCCAACCTTTGCCCTACGGTCTTG GACGTGTGGCACCGCTTCTCAGCTAGAGTATGATCCAGCTGGACTGGCGT TGAAGTACGGCGTTGAAGGGGGTGTGCTGGACTCAGAATTAGATGACAAT AGCAGCGACAGCAACAATGGAGATATCGGTGAGGCCACGTTAGATATATA TAATATCCTGTGCGGGACTTGAACTTCTTCCTTTGTTTGGGACGAAAAGT CGCGGTGCTGTACATACAGGATAGTATATAGATGACGCTGGAAGATATTT TCGGCGGGCAAGCTGTGATACGTGGCAGTTACTTCGGCACACAGGTCTAC AATGCCTCTTGACTTGAATCGTTGCAAATACTTCGAAGTAAACTGATCTG GTTGCTCGACCGGCAATGATTAACGGGGGGTGACTTATTGGAGAGAATCA TGATGTTCCAATACCTCGCCGCGCACAATTTATGTCATACTGTAGTCCCG GGCGTCAACGGTTGCTCACGACCTGAAGATCCAGCTCCGAGTGGTGTCGC AGGCGACAACGTTGCACGACTGTCGGGTGGAATGGCGGCCGCTCTTCAAA AGCTTCAAAATCAGAACGCCATACTCCTGGAAGCGGTAGAGGAAAAGAGC CGACAGGTGCAGATAGGTCCCGCCAACTACAACTACGTACAGCTGGAATC TTCGTCTCATTATTATGTGCATACACGGCGTATTGGATTCCGTTTGCAAC TATTGTAGTACTTCCAATCGGTGAGGTGAAGGTCTTCTGCGTGGGATTCG AAGAAATTATGTGATGAGAGTAGGCCTGACTATAGGTGATTGGATGAGAA GGGAATTGGGGTTGGACGCACTGGGCGTTTGCCTGAAAACAATCCTACCT GCAACAGGTGTCTGATTTCCAAACGTTCTCCACTTGCACCTTCCAGGTGT TAGAGTTGGGTACTTTGGTCGAGGCTTTGGAACCCGTGCCCGGCCTGGAT CCCAACGCCTTTCTCTCAGTACTCCATTGTGGAGGTGACACAGATAGGGG GAAGGACCTCGATTATAGAGATGTCAAGATAATTCAACTCGCGAAGCGTA TCCGGGATCGAGATGCGAAGCTGGAGAAAGAAAGGGCAAGGTGGGCGGGA TTGGCGTCATGATTCATTGAAGTTGTCACTTTTATCCACACACGGAAACA TATTGGACGCCGATACGTTGAATCGGATGGCTTAGTCTTCGTTGTATGGA AGATGGTTGTTGAGAATATCAGCAATTGTTTTTTGTGGAGCACACAGGAA CAACGCGATGGTTCACGTTTCGTAGAATTTTTCATGGCAACGGCGAGGGT CGTTTCGATTCTTTCGTACAAGTGATTGTGCGGGGTGGGGTTATCTCTTT GTTCACCACTGTACCAGGAGGTATTGTTCATTCGCCTGTTTTTATTCCAT CTTGCTTTTCACAGTTGCCTGAAAGCGCGTCGAGAGGCGGACGTCTTGGC GAAAGAGCTAGTGGCGTGTCGAAGACAGCTTGAGATCGTGTCATCCGCTG GACCTCGGTTGGTGCGCAGATATTGGGAAAGGGCAGCACTCAATGTTATT AAAACCAGAGCGAGCGTTAGATGCTGGTGCAATATGTCAACTGCGCGCAG CAGTACTCCTCGCTGAAATGAGTGTTTCGCTTAGTACATGTGCTACCCCG GCACATTTTTTCCTGGCAATAATACCTTGTGTCACATCCAGGATACCCAG CCGGCGGATGTCTCGTCTTCAGCCCGGATCGATGGAAACGAAGAACGCCT TCGACAGCAGGTGATCTTGCTGCTTTCGAGTTTGGCGAACGAGCCAACTA ATGCGCTTCATGAGAAGTCATGTGGGATATCATCCCCGACACACTATTCC CCTTTGACGAAATATATCCTGATGTTCGTGAAAAACGCGTTGTATCCATC CAAATAATAGCGTTGCGTCGGCTGCGCCAATCAACAAATGTATAGGCATC GTTAGAGCTATCGTTGCACGACCTACCATCGAAGTTCAATCCATCAACGT GCTATCGCTGGGAGAACAACGCCCGCCCGCACTTCTTGTTCAAACTCTTT CTTACTACCAGCCAGCACCATCGAGACATAGCACCAAAAGCTGATGAGAG GAACGTGCACACCCGCAAAACAACAGATCGTGCTGCTGAGGAACAAACTA CATGAGGCACAAGAGGAGGTTAAAAAAACGTACAGGGCTTTATCGAAAGA AGTAGGAGGAACCAGCTTGGGGCTAGGCCGGGCTTTGAACGACACGGGCG GGTGGAAGGGGCGCGCTCAGCAAATAGTGATGTTGAAGGCGACGGTGAAG CAGCTACAGACACAGCTTCGGAACGGACGGGTGAGTTGGAGGTCACCGTG GTTGTTCATAATTTGTTTTGCTTGACAACCGTTAGAAGCGCCTGCTGGTC GTTTACTTGTGTCGCGCAAACTTGAAGGTTTTTTCAGAAAATGCTATGAT AATAATGTTCCAGGACCCTGGGCAATCTGGCGAAACCCGCAGCAAGCAAG GGCGAAAGGACGTTGACAGCCAGGCGCAAGAGGAGATCCACTACATGGAA CGGCATCGTGGGCACGCAATCGAGCAGCTGGAGGCGAGAAAAAAGCGTTG A
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig927:1564..4864-

>mRNA_Ecto-sp9_F_contig927.17430.1 ID=mRNA_Ecto-sp9_F_contig927.17430.1|Name=mRNA_Ecto-sp9_F_contig927.17430.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2016bp|location=Sequence derived from alignment at Ecto-sp9_F_contig927:1564..4864- (Ectocarpus species9 EcSCA_722f female)
ATGGAGCAAGCACAGCAACCAGCGTCGAGCGTCATGGAGATGGAGCAAGC
ACAGCAACCAGCGTCGAGCGTCATGGAGCTAGAGTATGATCCAGCTGGAC
TGGCGTTGAAGTACGGCGTTGAAGGGGGTGTGCTGGACTCAGAATTAGAT
GACAATAGCAGCGACAGCAACAATGGAGATATCGCTAGAGTATGATCCAG
CTGGACTGGCGTTGAAGTACGGCGTTGAAGGGGGTGTGCTGGACTCAGAA
TTAGATGACAATAGCAGCGACAGCAACAATGGAGATATCGTCCCGGGCGT
CAACGGTTGCTCACGACCTGAAGATCCAGCTCCGAGTGGTGTCGCAGGCG
ACAACGTTGCACGACTGTCGGGTGGAATGGCGGCCGCTCTTCAAAAGCTT
CAAAATCAGAACGCCATACTCCTGGAAGCGGTAGAGGAAAAGAGCCGACA
GTCCCGGGCGTCAACGGTTGCTCACGACCTGAAGATCCAGCTCCGAGTGG
TGTCGCAGGCGACAACGTTGCACGACTGTCGGGTGGAATGGCGGCCGCTC
TTCAAAAGCTTCAAAATCAGAACGCCATACTCCTGGAAGCGGTAGAGGAA
AAGAGCCGACAGGTGTTAGAGTTGGGTACTTTGGTCGAGGCTTTGGAACC
CGTGCCCGGCCTGGATCCCAACGCCTTTCTCTCAGTACTCCATTGTGGAG
GTGACACAGATAGGGGGAAGGACCTCGATTATAGAGATGTCAAGATAATT
CAACTCGCGAAGCGTATCCGGGATCGAGATGCGAAGCTGGAGAAAGAAAG
GGCAAGGTGTTAGAGTTGGGTACTTTGGTCGAGGCTTTGGAACCCGTGCC
CGGCCTGGATCCCAACGCCTTTCTCTCAGTACTCCATTGTGGAGGTGACA
CAGATAGGGGGAAGGACCTCGATTATAGAGATGTCAAGATAATTCAACTC
GCGAAGCGTATCCGGGATCGAGATGCGAAGCTGGAGAAAGAAAGGGCAAG
TTGCCTGAAAGCGCGTCGAGAGGCGGACGTCTTGGCGAAAGAGCTAGTGG
CGTGTCGAAGACAGCTTGAGATCGTGTCATCCGCTGGACCTCGGTTGTTG
CCTGAAAGCGCGTCGAGAGGCGGACGTCTTGGCGAAAGAGCTAGTGGCGT
GTCGAAGACAGCTTGAGATCGTGTCATCCGCTGGACCTCGGTTGGATACC
CAGCCGGCGGATGTCTCGTCTTCAGCCCGGATCGATGGAAACGAAGAACG
CCTTCGACAGCAGGATACCCAGCCGGCGGATGTCTCGTCTTCAGCCCGGA
TCGATGGAAACGAAGAACGCCTTCGACAGCAGATCGTGCTGCTGAGGAAC
AAACTACATGAGGCACAAGAGGAGGTTAAAAAAACGTACAGGGCTTTATC
GAAAGAAGTAGGAGGAACCAGCTTGGGGCTAGGCCGGGCTTTGAACGACA
CGGGCGGGTGGAAGGGGCGCGCTCAGCAAATAGTGATGTTGAAGGCGACG
GTGAAGCAGCTACAGACACAGCTTCGGAACGGACGGATCGTGCTGCTGAG
GAACAAACTACATGAGGCACAAGAGGAGGTTAAAAAAACGTACAGGGCTT
TATCGAAAGAAGTAGGAGGAACCAGCTTGGGGCTAGGCCGGGCTTTGAAC
GACACGGGCGGGTGGAAGGGGCGCGCTCAGCAAATAGTGATGTTGAAGGC
GACGGTGAAGCAGCTACAGACACAGCTTCGGAACGGACGGGACCCTGGGC
AATCTGGCGAAACCCGCAGCAAGCAAGGGCGAAAGGACGTTGACAGCCAG
GCGCAAGAGGAGATCCACTACATGGAACGGCATCGTGGGCACGCAATCGA
GCAGCTGGAGGCGAGAAAAAAGCGTTGAGACCCTGGGCAATCTGGCGAAA
CCCGCAGCAAGCAAGGGCGAAAGGACGTTGACAGCCAGGCGCAAGAGGAG
ATCCACTACATGGAACGGCATCGTGGGCACGCAATCGAGCAGCTGGAGGC
GAGAAAAAAGCGTTGA
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