mRNA_Ecto-sp9_F_contig9215.17391.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS8_ECTSI) HSP 1 Score: 338 bits (866), Expect = 3.410e-116 Identity = 180/211 (85.31%), Postives = 187/211 (88.63%), Query Frame = 1
Query: 1 MSGELLQQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSLEDQVTKVETVMGDTALDECRDTRASFLSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLSGKKVTRCRRSNVWDEVSQPPLAP 633
MSGE QQLFSVDGSVPEGALCAIIG DSGKSALLALLSGR CMGRVEGRALFEGRLIEEQQ MPSN DRHSIGFVRQ HTGYLAELSVF NMMFAAMLRTPGSLEDQVTKVETV+GDTALDECRDTRASFL+AGEKRRLSLA+ELLSDRR+LLLD VFSGLDTN MVLMEVLKRLS KVTRCRRS++W+EV QPPLAP
Sbjct: 1 MSGEFQQQLFSVDGSVPEGALCAIIGPTDSGKSALLALLSGRPCMGRVEGRALFEGRLIEEQQ----------MPSNTDRHSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTKVETVIGDTALDECRDTRASFLAAGEKRRLSLAVELLSDRRILLLDGVFSGLDTNESMVLMEVLKRLSRNKVTRCRRSSMWEEVFQPPLAP 201
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 6.110e-19 Identity = 67/184 (36.41%), Postives = 94/184 (51.09%), Query Frame = 1
Query: 19 QQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSLEDQVTKVETVMGDTALDECRDTRASFLSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLSGK 570
Q L ++DG VP+G+LCA++G + SGKS LL LL+GR +GR G +F G+ I Q+ S ++ + +GY+ + + T+L+ +T+A LS G KRRLSLALELL DRR+L LD SGLD + + LM +LKRLS K
Sbjct: 491 QLLHNMDGEVPKGSLCALMGPSGSGKSTLLDLLTGRKAIGRCSGELMFNGKSIANQKGS-------------------YISK--SGYMRAIKL-----------------------------TSLEGSINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK 624
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: ABC (transporter domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YM44_PLABS) HSP 1 Score: 94.4 bits (233), Expect = 8.320e-19 Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 1
Query: 25 LFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDT------RASFLSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLS--GKKVTRC 585
L V G G LCAI+GS+ +GK+ LL +L+GR +G + G L G E + ++ FV QD L LSV + +M+AAMLR P S+ ED+ +VE ++ L +C D+ A +S GE++R+S+ +EL++D LL LD SGLD +M+V+K+++ G K C
Sbjct: 113 LKGVSGEAKPGQLCAIMGSSGAGKTTLLNVLAGRIDVGNLSGSILVNGDPRTESTW---------------KKTVAFVEQDDL-MLHNLSVRETLMYAAMLRLPSSVSKEDKANRVEKIIEQLGLKKCADSWIGSVDTARGISGGERKRVSIGIELVTDPSLLFLDEPTSGLDAFTACTVMDVVKKVAVAGNKTVLC 293
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: ABC (transporter n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1BKG2_TREME) HSP 1 Score: 91.7 bits (226), Expect = 8.060e-18 Identity = 64/197 (32.49%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 49 PEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASF-----LSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRL--SGKKVTRC---RRSNVW 603
P G + AI+G + +GKS LL LL+GR R + G ++ + + S + +I FV QD +L L+V + + +AA+LR P + + ++ + ETV+ L +C D +S GEKRRLSLA+++++D +LL+D SGLD + + +M+VLK + SG+ V RS++W
Sbjct: 825 PAGEISAILGPSGAGKSTLLQLLAGRKLQAGASARFIRTGDMLFANEPA----------STSSQSNIAFVEQDDDWHLPSLTVRETLRYAAILRLPNKMPKKQKIARAETVLLMLGLKDCADLPVGGALLKGISGGEKRRLSLAVQMINDPAVLLVDEPTSGLDASIALSVMQVLKDIAASGRTVIATIHQPRSDIW 1011
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: Hypothetical (protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V328_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 1.020e-17 Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 19 QQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASFL-----SAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLS 564
Q LF+V G G L A++G + GKS+LL +L GR+ R G + G+ + + + SIGFV QD Y L+VF+ + +AAML+ P ++ ED++ + E VM L CRDT + S GE++R+S+ +ELL++ ++LLD SGLD+ + LM L+ L+
Sbjct: 128 QVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM----------------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 298
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V2E3_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 1.040e-17 Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 19 QQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASFL-----SAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLS 564
Q LF+V G G L A++G + GKS+LL +L GR+ R G + G+ + + + SIGFV QD Y L+VF+ + +AAML+ P ++ ED++ + E VM L CRDT + S GE++R+S+ +ELL++ ++LLD SGLD+ + LM L+ L+
Sbjct: 273 QVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM----------------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 443
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: Uncharacterized (protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JCM6_9FUNG) HSP 1 Score: 89.7 bits (221), Expect = 3.560e-17 Identity = 63/198 (31.82%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 16 LQQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL-----EDQVTKVETVMGDTALDECRDTR-----ASFLSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLSGKKVT 579
L+ L + GS P G + A++G + +GKS L+ +L+G+ G+V G L G+ + E + R ++GFV Q+ T A +V++ ++F+AMLR P ++ ++V +V ++G L C+D + A +S GEKRR+S+ALEL++ +L+LD SGLD+ + ++++ L +L+ K T
Sbjct: 373 LEILKGISGSAPAGVVLAVMGPSGAGKSTLVDILAGKRKDGKVSGHILLNGKQVHESEI---------------RRAVGFVDQEDT-LPATQTVWEAVLFSAMLRLPEAMPIHRVHERVAEVIEMLG---LTHCKDRQIGNVTARGISGGEKRRVSIALELITRPPILILDEPTSGLDSYSAHMVVQQLCKLAASKTT 551
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: p-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2AYK9_9TREE) HSP 1 Score: 89.4 bits (220), Expect = 5.030e-17 Identity = 66/205 (32.20%), Postives = 107/205 (52.20%), Query Frame = 1
Query: 25 LFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASF-----LSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLS--GKKVTRC---RRSNVW 603
L SV P G + AI+G + +GKS LL LL+ R G+L+ Q + S+ R ++ FV QD +L L+V + + +AA+LR P + ++V + ETV+ L +C D +S GEKRRLSLA+++++D +LL+D SGLD + + +M+VL+ ++ G+ V RS++W
Sbjct: 741 LDSVSAVFPAGEVSAILGPSGAGKSTLLQLLAHRPITASPLSHFTTSGQLLFANQPA----------SSTSRSNVAFVEQDDDWHLPSLTVRETLRYAAILRLPNKMPRREKVARAETVLRMLGLKDCADLPVGGQLLKGISGGEKRRLSLAVQMINDPAVLLVDEPTSGLDASIALSVMQVLRDIAATGRTVIATIHQPRSDIW 935
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: Uncharacterized (protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y0X4_9FUNG) HSP 1 Score: 89.0 bits (219), Expect = 6.500e-17 Identity = 60/194 (30.93%), Postives = 106/194 (54.64%), Query Frame = 1
Query: 4 SGELLQQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASF-----LSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLS 564
SG+ L + G +G + AI+G + +GK+ L+ +L G+ G+V G L +GR + + RH +GFV Q+ EL+V++++MF+A LR P + +++ +VE ++ L++ RD R LS GEKRR+++ LEL+S+ +L+LD SGLD+ + +++ +L L+
Sbjct: 368 SGQTTTILDGISGRASKGQVLAIMGPSGTGKTTLVDILGGKRKSGKVRGSLLVDGRAMSTAEM---------------RHLVGFVDQEFV-LAPELTVYESLMFSACLRLPDCVPYKEKCQRVEDLIVKLGLEKVRDRRVGSVATRSLSGGEKRRVAIGLELVSEPAILILDEPLSGLDSFSAAMVIRILHDLA 545
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Match: Uncharacterized (protein ABCG25 (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHI7_DICPU) HSP 1 Score: 88.6 bits (218), Expect = 7.310e-17 Identity = 67/209 (32.06%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 25 LFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGRALFEGRLIEEQQASAGFGSCSGMPSNRDRHSIGFVRQDHTGYLAELSVFKNMMFAAMLRTPGSL--EDQVTKVETVMGDTALDECRDTRASF-----LSAGEKRRLSLALELLSDRRLLLLDRVFSGLDTNACMVLMEVLKRLSGKKVTRCRRSNVWDEVSQPPLA 630
L +++ + G LCAI+G + SGK+ LL LSGR V+ +G + F S + P + R ++G+V Q L L+V + ++F+A+LR P S+ E+++ +VE+++ + L +C DTR +S GEKRRLS+ +LL+D +L LD + +GLD++ + E++K LS K+ R + + + QP ++
Sbjct: 4 LKNINAIIRPGELCAILGGSGSGKTTLLNTLSGRY----VKSEMKVKGDIC--------FNSFNPSP-DLIRKTVGYVMQKDYP-LPNLTVRETLVFSALLRLPASIPKEEKLKRVESIISELCLKDCADTRVGGNGKHGISGGEKRRLSVGCQLLTDPSVLFLDEITTGLDSS---IAFELIKTLS--KIARIQNRTIITTIHQPQVS 193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9215.17391.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9215.17391.1 >prot_Ecto-sp9_F_contig9215.17391.1 ID=prot_Ecto-sp9_F_contig9215.17391.1|Name=mRNA_Ecto-sp9_F_contig9215.17391.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=211bp MSGELLQQLFSVDGSVPEGALCAIIGSADSGKSALLALLSGRSCMGRVEGback to top mRNA from alignment at Ecto-sp9_F_contig9215:2736..4713+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9215.17391.1 ID=mRNA_Ecto-sp9_F_contig9215.17391.1|Name=mRNA_Ecto-sp9_F_contig9215.17391.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1978bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9215:2736..4713+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9215:2736..4713+ >mRNA_Ecto-sp9_F_contig9215.17391.1 ID=mRNA_Ecto-sp9_F_contig9215.17391.1|Name=mRNA_Ecto-sp9_F_contig9215.17391.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9215:2736..4713+ (Ectocarpus species9 EcSCA_722f female)back to top |