mRNA_Ecto-sp9_F_contig9108.17299.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD01_9PHAE) HSP 1 Score: 384 bits (986), Expect = 1.930e-120 Identity = 217/308 (70.45%), Postives = 222/308 (72.08%), Query Frame = 1
Query: 1 VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSS-DEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADK-------------------------------------------------------------------GAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLTGDEGRR 720
VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQ+YVNTLSP + DEDAGN+GGSLVLSETDL PL+DAVEAFRAAADK GAGSD VDSAAEAA WLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELA+EQVHVAAARIEDAATFLTGDEGRR
Sbjct: 481 VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQEYVNTLSPSSXXXXXXXXXDEDAGNIGGSLVLSETDLAPLQDAVEAFRAAADKVGSWSQEAFSSSGAAGXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXAVGAPDELQGAGSDGGDVGVGVDSAAEAAHWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAKEQVHVAAARIEDAATFLTGDEGRR 788
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Glutamate (carboxypeptidase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMG7_9STRA) HSP 1 Score: 180 bits (457), Expect = 6.170e-45 Identity = 115/243 (47.33%), Postives = 139/243 (57.20%), Query Frame = 1
Query: 1 VFLAHLGIATVDFEFQQDEAAE-YGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLT-GD-EGRR 720
VFL HLGI+++D D YG+YHS YDSFSW+ +GDP F + +WG LALR+A + VLP + QA AL YV L +S + DL PL+ AV A+ AA++ V E A +A LN+RLA TERRF EGLP R+WF+HVLQAPGLYLGYA SFPG+TQALSDGD ELAQ QV VAA R+ AA +L GD EG R
Sbjct: 512 VFLDHLGISSIDMGAVIDRFKRPYGMYHSTYDSFSWMSRFGDPTFELHVMVAELWGRLALRVADALVLPLEHTAQATALHAYVEELKALVGTSME-------------VAPESLDLAPLEAAVRAYEDAAEQVTREAAGLRSSGVKQDREQA----LAALNDRLAFTERRFCAKEGLPRRKWFKHVLQAPGLYLGYAGVSFPGVTQALSDGDWELAQRQVWVAAERVGTAAAYLAWGDREGGR 737
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWE9_9EUKA) HSP 1 Score: 173 bits (438), Expect = 1.690e-42 Identity = 103/235 (43.83%), Postives = 134/235 (57.02%), Query Frame = 1
Query: 4 FLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLA-TSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLTG 705
F+ HLGIA++D F D A YGVYHS+YDSF W+D GDPGF+Y Q ++VWGLL LRLA S LPF+ QA A+ +YV+ L A S + + LVPLK AV F AA D ++ L++RLA TERRFL + GLP R+WF+HVLQAPGLY GY ++ FPG+ L + + + A +QV VAA R+ AA +L+G
Sbjct: 513 FIDHLGIASLDIRFVPDTGARYGVYHSVYDSFDWMDKQGDPGFKYHQTMAKVWGLLTLRLADASGRLPFNHTSQADAMHEYVHILEHEAEVSKA----------------PKGLLVPLKAAVTLFEIAARSVGAYD-----------------IDHHTLDDRLAFTERRFLSESGLPHRKWFKHVLQAPGLYKGYGSDVFPGVIHELREKNFDGAFQQVKVAAKRVSAAAAYLSG 714
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP1_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.400e-39 Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1
Query: 4 FLAHLGIATVDFEFQ----QDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEG---LPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLT 702
FL H+GIA V+FEF+ YG YHS+YDSF W++ +GDPGF Y A++ WGLLALR++ D+LPFD +QA L D V+ D+ VG L L DA++ F++AA++ D A + + +V LN++L++ ER+FL EG LP R WF+HVLQAPGLYLGY A +FPGI Q + + D ++ Q +V + I A +F++
Sbjct: 170 FLHHVGIAAVNFEFEISSKHSRVTTYGTYHSVYDSFDWMEQFGDPGFLYTTVAAQFWGLLALRMSEPDILPFDLAVQAKLLSDQVSDFEALV---------PDSEKVG---------LGDLLDALKGFKSAAEE-----LNRDVAAADLAKISTE--DVEQLNDKLSLCERQFLRPEGEGGLPSRPWFKHVLQAPGLYLGYGAVAFPGIAQGIDENDWDMVQREVSASRKCIRLATSFIS 384
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EC49_9EUKA) HSP 1 Score: 152 bits (385), Expect = 2.090e-38 Identity = 105/239 (43.93%), Postives = 132/239 (55.23%), Query Frame = 1
Query: 4 FLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLA-TSD--VLPFDPPL----QAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFL 699
F+ HLGIA++D F A YGVYHS +DSF W+D+ GDPGF + A ++VWGL+ALRLA T+D VLP PL QA A+ Y+ D D D PL A F AAA + + A A+ VA L+ER A TER+FL GLPGR++F+H LQAPGLY GYA ++ PG+ A+S GD + A EQ +AAARIE AA FL
Sbjct: 61 FIDHLGIASLDLAFWP--GAAYGVYHSDFDSFEWMDSVGDPGFVFHVAMAQVWGLVALRLAGTADTNVLPTPIPLNFTLQAEAIFSYIADAKLH---------DADQ----------HVDYAPLDAAAATFAAAARQAMHDER--------EAVRTANVATVAALDERFAYTERQFLTAGGLPGRKYFKHCLQAPGLYTGYAPKTLPGVYDAVSAGDWKTANEQAGIAAARIEAAAKFL 270
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C128_9EUKA) HSP 1 Score: 153 bits (387), Expect = 9.210e-38 Identity = 99/247 (40.08%), Postives = 133/247 (53.85%), Query Frame = 1
Query: 4 FLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSD-------------VLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLTG 705
F+ HLGI ++D F A YGVYHS++DSF W+D+ GDPGF+Y A S++WGL+ALRLA S +PF+ LQA A+ Y+ R + G++V D L A F AAA+ + +A D + LNER+ TER+FL +GLP R++F+H LQAPGLY GYA ++ PG+ A+S GD E A Q +AA RI+ AATFL G
Sbjct: 152 FIDHLGIPSLDMAFWP--GAAYGVYHSVFDSFEWMDSVGDPGFKYHVAMSQLWGLVALRLAGSSSEGEDVSAPPSTTTVPFNFTLQAEAIGTYIADAKARPN---------------GTMV----DYRALDAAQAKFAAAAEHAMAQER--------AAMGTHDLALIRSLNERMVYTERQFLTADGLPERKYFKHCLQAPGLYTGYAPKTLPGVYDAVSAGDWETANAQATIAAERIDAAATFLMG 369
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: LAMP1 (protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812TNU8_SYMPI) HSP 1 Score: 157 bits (396), Expect = 6.130e-37 Identity = 101/240 (42.08%), Postives = 134/240 (55.83%), Query Frame = 1
Query: 1 VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDV-----LPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAF-RAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLT 702
VF+ HLGI ++D F A +YGVYHS+YDSF+W+ GDP F Y A S+VWGL LRLA S LP + +QA A+Q Y+ A S +G++ + PL+ A EAF RAA A +D + + EV N R+ + ER FL++ GLPGR+WFRH LQAPGLY GY A++FPGI +A+S + +LAQ Q+ A RIE AA +T
Sbjct: 495 VFIDHLGIPSLDMSFTPGNA-QYGVYHSVYDSFTWMATEGDPNFTYHVAMSQVWGLTTLRLAGSTKSGNLPLPLNLTIQAQAIQGYIA----EAQESLNGTAQR------------KLWFEPLEQASEAFLRAAQHASAEADRLRRLGP-------SAFHEVVAFNNRIGLLERSFLMESGLPGRKWFRHCLQAPGLYTGYGAKTFPGINEAISAEEWDLAQSQIKACAQRIEAAAASIT 710
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812LK54_9DINO) HSP 1 Score: 156 bits (395), Expect = 8.550e-37 Identity = 102/248 (41.13%), Postives = 132/248 (53.23%), Query Frame = 1
Query: 1 VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSD-----VLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWL---------EVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLT 702
VF+ LGI ++D F EA YGVYHS+YDSF+W+ GDP F Y A S+VWGL ALRLA SD LP + +QA A+ Y+ + + VL PL+ A AF AADK + E AD L E+ N ++ + ER FL++ GLPGR+WFRH LQAPGLY GYAA++ PGIT+A+S D +LAQ Q+ A RI AA+ L+
Sbjct: 499 VFIDRLGIPSLDMSFTPGEA-HYGVYHSVYDSFNWMATEGDPNFTYHVAMSQVWGLTALRLAGSDDRGNLPLPLNLSIQAQAISSYIAEAK------------QTLNHTAPERVLR---FEPLEQATAAFLQAADKSS---------------EEADRLRKLGPPAFDEIVAFNNKIGLLERSFLMESGLPGRKWFRHCLQAPGLYTGYAAKTLPGITEAISAKDWQLAQAQIQACAERIWSAASALS 715
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: M28 (family peptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1WRI4_9BACT) HSP 1 Score: 153 bits (387), Expect = 2.100e-35 Identity = 97/235 (41.28%), Postives = 130/235 (55.32%), Query Frame = 1
Query: 4 FLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNVGGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVA-DLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFLTG 705
FL HLGIA D F+ D YGVYHSIYDSF W++ +GDP F Y +AA+++WGL+ LRLA S +LPFD L+ + L+ A DE E D+ PL+ A++ F AAA V A ++ ++ LN+RL +TER F+ EGLP R W++HV+ APGLY GYAA FPG+ +AL D + A+ ++ A IEDAA L G
Sbjct: 891 FLQHLGIAAADIRFRGD----YGVYHSIYDSFHWMEKFGDPTFAYHRAAAQIWGLIVLRLADSPILPFDYTEYGRELKRALQGLNLPA--------DEHH----------ELDVAPLRRAIDLFEAAA--------MIVQAEVRRATRSSTTEQMRRSLNDRLMLTERAFIDTEGLPRRPWYKHVVYAPGLYAGYAARVFPGLAEALEDRNWPEARAHINRLARLIEDAALTLVG 1095
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J998_GUITC) HSP 1 Score: 152 bits (384), Expect = 2.560e-35 Identity = 98/236 (41.53%), Postives = 133/236 (56.36%), Query Frame = 1
Query: 1 VFLAHLGIATVDFEFQQDEAAEYGVYHSIYDSFSWVDNYGDPGFRYFQAASRVWGLLALRLATSDVLPFDPPLQAAALQDYVNTLSPRASSSSSGSSDEDAGNV---GGSLVLSETDLVPLKDAVEAFRAAADKGAGSDXXXXXXXVDSAAEAADWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAQEQVHVAAARIEDAATFL 699
VFL HLGI +VD ++ + +A YGVYHS+YDSFS++ DP FRY +R WG+ LR + S +LP+DP A AL Y+ + +++ + V GS V DL L++AV F AA A + ++ + LNE + TER FL GLPGR+WFRH+LQAPGLYLGY A+ FPGI QA+ DGD +LAQEQ A ++ A++ L
Sbjct: 503 VFLDHLGIPSVDLSWRHNTSA-YGVYHSVYDSFSYMVQQVDPDFRYHALCTRFWGVTLLRFSDSALLPYDPKSLAGALNKYLLYVKSMMNATVCRGQCSEIFKVVKQEGSGVF-PLDLSELEEAVSGFTTAASSPALQQAIASCRQEGACSKRL----LLRLNEAMRRTERAFLDPAGLPGRKWFRHILQAPGLYLGYGADMFPGICQAIRDGDAKLAQEQATRCAGVVKHASSVL 732 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9108.17299.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9108.17299.1 >prot_Ecto-sp9_F_contig9108.17299.1 ID=prot_Ecto-sp9_F_contig9108.17299.1|Name=mRNA_Ecto-sp9_F_contig9108.17299.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=77bp MTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELback to top mRNA from alignment at Ecto-sp9_F_contig9108:2389..5146- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9108.17299.1 ID=mRNA_Ecto-sp9_F_contig9108.17299.1|Name=mRNA_Ecto-sp9_F_contig9108.17299.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2758bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9108:2389..5146- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9108:2389..5146- >mRNA_Ecto-sp9_F_contig9108.17299.1 ID=mRNA_Ecto-sp9_F_contig9108.17299.1|Name=mRNA_Ecto-sp9_F_contig9108.17299.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=462bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9108:2389..5146- (Ectocarpus species9 EcSCA_722f female)back to top |