mRNA_Ecto-sp9_F_contig9101.17290.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 558 bits (1439), Expect = 2.280e-193 Identity = 431/482 (89.42%), Postives = 437/482 (90.66%), Query Frame = 3
Query: 159 MPGYVERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGLQERPXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGARARIEAAGEGTMGGFDGLSAWMMALTEENLFRKIVGFL 1604
MPGY ER SILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGA DMK KSLDTGHTPLDLAVIGGKEAAAKALIMAGA+VNTLDATNDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPL+YAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQ +AESSEA RPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAV++PAAAAEATEGLQERP XXXXXXXXXXXXXXXXXXXXXXXXXX SGARARIEAA EGT+ GFDG SAWMMALTEENLFRKIVGFL
Sbjct: 1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEATEGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGARARIEAAREGTVCGFDGFSAWMMALTEENLFRKIVGFL 482
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: F-box (domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 251 bits (640), Expect = 2.160e-75 Identity = 127/146 (86.99%), Postives = 130/146 (89.04%), Query Frame = 3
Query: 144 HHLHIMPGYVERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDG 581
H I+PGY ER SILQDLGDT FKLV DRATP+QWAEWLRAPLEHAA TGNRDLVDKLLGAGAN GAGWRGCHGKTLLHAAAEGGNV VIT LR AGA DMK K+LDTGHTPLDLAVIGGKEAAAKALIMAGANVN LDATNDG
Sbjct: 38 HTSSIIPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDG 183
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Ankyrin (repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI) HSP 1 Score: 245 bits (626), Expect = 7.660e-72 Identity = 238/371 (64.15%), Postives = 259/371 (69.81%), Query Frame = 3
Query: 291 TGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGADPHFRAANR--PLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGLQERP 1397
TGNRDLVDKLLGAGAN GAGWRGC GKTLLHAAAEGGNV VI LRRAGA GDMK K+LDTGHTPLDLAV+GGK AAA+ALIMAGA+VN LD+ NDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +G D + R PL + + + + AAI ALFEAG +IEG GRTPL++AA SY XXXXXXXXXXXXXXXXXXXXXX ETVVS V++ IAE+ E P ER+SKLLARAPQDRAWRRRGFLVLCRAH DRVRLAVE+P AAAEATEG Q+RP
Sbjct: 48 TGNRDLVDKLLGAGANGGAGWRGCDGKTLLHAAAEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------VEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRP 385
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE) HSP 1 Score: 237 bits (604), Expect = 3.420e-69 Identity = 192/457 (42.01%), Postives = 221/457 (48.36%), Query Frame = 3
Query: 234 ATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGLQERPXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGARARIEAAGEGTMGGFDGLSAWMMALTEENLFRKIVGFL 1604
ATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAG LRRAGA GDMK K+LDTGHTPLDLAV+GG EAAA+ALIMAGA++N LD NDG +AVR +HV+TVKVLL+EGADP+ L LL + +IE RTS TPL A + S + +S V++ +AE+ AS P E +S+LL APQDRAWRRRGF+VL RA P+RVRLAVE+PA AAEATE Q+ XXXXXXXXXXXXXXXX ARA IE EGT+GGFDG+SAWM AL EE +FR+IVGFL
Sbjct: 12 ATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAG------------------------------LRRAGAGGDMKAKTLDTGHTPLDLAVVGGNEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGSNGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLY----------------VAVRENHVSTVKVLLAEGADPNS------LNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGS---------------------------CAAMLTLLQLGANVNSKENRGKPRPKGKAAISVVIRCMAETRAASLPRLEHVSELLVPAPQDRAWRRRGFVVLRRALPNRVRLAVEIPARAAEATEQPQQXXXXXXXXXXXXXXXXXXGTHRGGGRAGEXXXARAGIEVVREGTVGGFDGVSAWMTALAEEEVFRRIVGFL 389
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 224 bits (571), Expect = 1.310e-64 Identity = 184/486 (37.86%), Postives = 208/486 (42.80%), Query Frame = 3
Query: 159 MPGYVERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGADPHFRAANRP----LKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGLQERPXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGARARIEAAGEGTMGGFDGLSAWMMALTEENLFRKIVGFL 1604
MPGY ER SILQDLGDTIFKLVCD ATPEQWAEWLRAPLEHAA T GA GD+K K+ T HTPLDL V GGKEAAAKALIMAGA+ + + LA V ++ +G D + R L LL +AA N+AAAI LFEAG +IE R T Q A +S ETVV VMQ IAE+ + RP ER+S+LLARAPQDRAWRRRGFLVL R HPDRVRLAVE+P AAA+ATE Q+RP X SG RA IEA EGT+ GF G+SAWMMALTEE +FR+IVGFL
Sbjct: 1 MPGYKERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAAT-----------------------------------------------GAGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMWE------------------------------------------------HRVAKDLLLSGANPIQAGSNGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARL----TLFQLGAKVNS----------------KENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXTGAS----SGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.070e-52 Identity = 254/459 (55.34%), Postives = 295/459 (64.27%), Query Frame = 3
Query: 291 TGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGADPHFRAANRPLK-------LLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ETVV-------SRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGL---QERPXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGAR-ARIEAAGEGTMGGFDGLSAWMMALTEENLFRKIVGFL 1604
T N +LV KLL AGA+ G GWRGCH KTLLHAAA+GG+ V++ L+RAGA D + ++ TGHTPL LAV+GG A AKAL MA A+VN LDA N GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVR DH++TV+VLL+ GA+ AN P +LH AA+ + A AIP L EAG ++ Q + +YD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ET V S + IAE+++ ER+SKLL RAPQDRAWRRRGFL LCRAHPDR+RL VE+P A EA+ QERP S A R++ G+G GGF+ + W++AL EE++FRKIVGFL
Sbjct: 21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLR---AVRQDHISTVRVLLAVGAN-----ANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASV-----------QSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDG--GGFEFAAGWLVALAEEDVFRKIVGFL 458
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 191 bits (485), Expect = 2.020e-52 Identity = 129/273 (47.25%), Postives = 154/273 (56.41%), Query Frame = 3
Query: 789 LAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-TVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVEVPAAAAEATEGLQERPXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGARARIEAAGEGTMGGFDGLSAWMMALTEENLFRKIVGFL 1604
LAV+ +HV + LL+EGAD +F RP+ L H+AA N AAA+PALF+AGV IEGR+ GRTPLQ AA S E T+VS + I ++ ASR ER+S+LLARAPQDRAWRRRGFLV C +HPDRV+LAVE+P AA EA E QERP XXXXXXXX+SGAR E+ EGT GGF+GLSAWM+ALTEE+LFRKI+GFL
Sbjct: 64 LAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDGGFNGLSAWMIALTEEHLFRKIMGFL 336
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Pc16g06120 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.120e-42 Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 3
Query: 174 ERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLDTGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATND 578
+RV IL D D IFKL+CDRAT EQW EWLRAPLEHAAGT NRDLV+KLL AGA+ AGWRGC TLLHAA V+T+L RAGA DM+ K+ TG TPL +AV+ G+EAAA+ L++AGA+VN +D D
Sbjct: 10 DRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTD 144
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 166 bits (420), Expect = 2.290e-42 Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 3
Query: 174 ERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAWGDMKEKSLD-TGHTPLDLAVIGGKEAAAKALIMAGANVNTLDATND 578
+R L D IFKL+CDRAT EQWAEWLRAPLEHAAGT N+DLV+KLL AGA+ AGWRGC KTLLHAAAEGGN V+T+L RAGA DM+ K L G TPL +AV GK+AAA+ L++AGA+VN D D
Sbjct: 10 DRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 166 bits (420), Expect = 6.610e-42 Identity = 189/432 (43.75%), Postives = 217/432 (50.23%), Query Frame = 3
Query: 174 ERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVH-VITSLRRAGAWGDMKEKSLDTGH-TPLDLAVIGGKEAAAKALIMAGANVNTLDATND------------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAVRGDHVTTVKVLLSEGAD----------PHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLQYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQVIAESSEASRPFFERISKLLARAPQDRAWR 1289
+R IL D D IF+L+CDRAT EQWAEWLRAPLEHAAGT N+DLV+KLL AGAN AG RGC TLLHAAAEGGN V+T+L +AGA D++ K + TPL +AV GKEAAA+A+++AGA+VN D D G A +G H V L +GAD P N LHVA K N+A AIPA EAG +IE RTS GR+PL Y A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T S +M VIA++ E RP ER++ LL +APQDRAWR
Sbjct: 12 DRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTLLDLVIGCRGFARDCPIHAAVLVNSWLLGKICCIDETLDQENRSKGGVSWVGAQHPSSITLGHSPDHAYSPNTDRCMERANALSYVLHILGLIPDIQTILSDSLRFCRYTCLYLEHAARQGRH-DVVHALAYKGADLDALDDEGMTPISLGTNLSKTALHVAVKCNKAGAIPAFIEAGADIEARTSLGRSPLWYVAWKGPCAAMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTTPSALMPVIAQADERDRPRLERLTALLEKAPQDRAWR 442 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9101.17290.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9101.17290.1 >prot_Ecto-sp9_F_contig9101.17290.1 ID=prot_Ecto-sp9_F_contig9101.17290.1|Name=mRNA_Ecto-sp9_F_contig9101.17290.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=500bp MPGYVERVSILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLback to top mRNA from alignment at Ecto-sp9_F_contig9101:281..2620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9101.17290.1 ID=mRNA_Ecto-sp9_F_contig9101.17290.1|Name=mRNA_Ecto-sp9_F_contig9101.17290.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2340bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9101:281..2620+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9101:281..2620+ >mRNA_Ecto-sp9_F_contig9101.17290.1 ID=mRNA_Ecto-sp9_F_contig9101.17290.1|Name=mRNA_Ecto-sp9_F_contig9101.17290.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3000bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9101:281..2620+ (Ectocarpus species9 EcSCA_722f female)back to top |