mRNA_Ecto-sp9_F_contig909.17271.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig909.17271.1
Unique NamemRNA_Ecto-sp9_F_contig909.17271.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI)

HSP 1 Score: 530 bits (1365), Expect = 4.310e-188
Identity = 282/306 (92.16%), Postives = 286/306 (93.46%), Query Frame = 1
Query:    1 AFHEADAFVPPTGGLAKAPSSAVHVSSTSTSSRRGCPGVDVRVRGVERSARPRRTGRQQQGQGGALMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLNEKKQ 918
            A   ADAFVPPTGG A A SSAVHVSSTS  SRRGC GV       ERSARPRRTGRQQ+GQG ALMAQMTDEEMALDQALIQRVT+EVEAESGVELDQLINPAKVINLERDLVKLRAALED  G DR+AIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPF+TKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLNEKKQ
Sbjct:   38 ALRGADAFVPPTGGFATARSSAVHVSSTS--SRRGCSGV-------ERSARPRRTGRQQEGQGDALMAQMTDEEMALDQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLRAALEDEPGTDREAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLNEKKQ 334          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 1.610e-181
Identity = 273/299 (91.30%), Postives = 276/299 (92.31%), Query Frame = 1
Query:    1 AFHEADAFVPPTGGLAKAPSSAVHVSSTSTSSRRGCPGVDVRVRGVERSARPRRTGRQQQGQGGALMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARD 897
            A   ADAFVPPTGGLAKAPSSAVHVSSTS  SRRGC GVDVRVRG+ERSARPR TGRQQQGQG  LMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDG G DRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK          G+ GA R+
Sbjct:   35 ALRGADAFVPPTGGLAKAPSSAVHVSSTS--SRRGCSGVDVRVRGIERSARPRSTGRQQQGQGDVLMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGNDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKV---------GLTGATRE 322          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA)

HSP 1 Score: 256 bits (655), Expect = 2.960e-81
Identity = 131/222 (59.01%), Postives = 162/222 (72.97%), Query Frame = 1
Query:  220 EMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKP-GASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVR 882
            E A DQALI RV  EVE ESGV LDQLINP+KVINLERDLVKLRA LE  +G     + + I  KE+ L  EKR  MQ WLK++FVGQA ++ I+ G M  D+VP F HVD+SI+VLGFW +WLF +PSLRARKP   +EK AL+IAF+A+P+VS A+P +TK+PV IYWAN+A   A Y YGF  G   + +      QP+W++FIFK+LDFGSG+ERG R
Sbjct:   62 EAAADQALIARVAAEVERESGVALDQLINPSKVINLERDLVKLRATLETATGDSASELRKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITKDPVSIYWANLAVCAASYVYGFASGGQSEED---EAKQPQWVRFIFKALDFGSGRERGAR 280          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK)

HSP 1 Score: 234 bits (596), Expect = 2.600e-72
Identity = 122/227 (53.74%), Postives = 162/227 (71.37%), Query Frame = 1
Query:  205 QMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGSGGDRKA-IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVR 882
            ++T EE AL   +I+R+ +EV   SGVEL+QL++PAKV+NLER++ +L+  LE  S   R A IEEEIA K++    EKRMY+QGWLK +FVGQ+V++ ++ G ++   VPF   VDIS++VLGFWF+WLFT+PSLRARKP A EK AL+ AF  TP+ +   PFVTK+PV IYWAN+    ACYGYG  + KP D    A  + P W+K   K+LD+GSG+ERG R
Sbjct:   61 ELTPEEDAL---IIKRLEDEVMEISGVELEQLLSPAKVVNLEREIFQLKKELETTSNQARAAEIEEEIATKQTKANGEKRMYVQGWLKTLFVGQSVLSVVVAGFLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAPFVTKDPVLIYWANLVVTAACYGYGLLLWKPSDAPAEADTT-PGWVKDALKALDYGSGRERGAR 283          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.410e-71
Identity = 121/222 (54.50%), Postives = 154/222 (69.37%), Query Frame = 1
Query:  232 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGSGGDR-KAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGAS----KSQPKWLKFIFKSLDFGSGQERGVR 882
            D AL+ R+ +EVE  +GVELDQL+NP KV+NLERDL+KL   LE      R + I +E+ +K   L  EKRM +QGWLK +FVGQAVI+T   GLM  D VPF  H+D+S++VLGFW +WLFTVPSLRARKP A EK AL+IAF ATP+ + A+PF TK+PV IYWAN+A L   Y YGFT+G               + P +LK   ++LD+GSG+ERG+R
Sbjct:   75 DAALVARLAKEVEEANGVELDQLLNPGKVVNLERDLLKLSKELEICQDSTRIEEINKEMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALPFFTKDPVTIYWANMAVLGLSYAYGFTLGSXXXXXXXXXXXXXSNLPDFLKAAIRALDYGSGRERGLR 296          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Resistance (to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA)

HSP 1 Score: 212 bits (540), Expect = 9.980e-64
Identity = 109/226 (48.23%), Postives = 151/226 (66.81%), Query Frame = 1
Query:  232 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLR---AALEDGSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTV---GKPDDGEGGASKSQ---PKWLKFIFKSLDFGSGQERGVR 882
            D  ++QR+ E+V  E+GV+LDQL+NP+KV+NLE +L+ LR   AA   G G     +E +I KKE+ L  EKR+ M+GWLK +F+GQ+++  +L G++A D +P F H+ + I+   FW  W+FT+PSLRAR+PGA EK ALD+AFL TPVVS  MPF+T++   I+WAN       YGY F     G+  +GE G S+     P  LK   K+LD+GSG+ERGVR
Sbjct:   70 DDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVR 295          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YSX9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 7.070e-60
Identity = 115/258 (44.57%), Postives = 153/258 (59.30%), Query Frame = 1
Query:  202 AQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALED---------------------GSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP---------HVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGF-TVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVR 882
            A M  +E+  D   ++R+ E+++ ESGV+LDQL+NPAKV+NLERDLV LR+ L D                     G G D   + ++I+KKE  L+ E+R   +GWLK +F+GQA+++  L  +M +D    F           +DISIQVLGFW   LF VPSLR+R+P   EK ALDIAFLATP+VS   P  TK+   I+ AN A     Y + + T  K  DG+       P+WLKFI+KSLDFGSG+ERG R
Sbjct:   72 APMMADELTADDPFVRRINEQIQEESGVDLDQLLNPAKVVNLERDLVNLRSQLADLTGITGIDNFIGITTEEIDNGGGGEDADKLRKKISKKEKDLLIERRSVFRGWLKNIFLGQAILSLGLSWIMVTDPSILFGGFDWFNNTNSIDISIQVLGFWXXXLFIVPSLRSRRPKGFEKKALDIAFLATPLVSLLAPVATKDTAEIWIANFAVTAGAYAFAYLTFDK--DGDNNDGSKDPEWLKFIYKSLDFGSGRERGAR 327          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLN3_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.720e-59
Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 1
Query:  283 VELDQLINPAKVINLERDLVKLRAALE--DGSGGDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGA------SEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLNEKKQ 918
            V L QL+NP+KV+NLE+D+  LRA+L   D     R+ I ++IAKKE     E R  M+ WLK VFVGQ+V++  + GL++ D +PF P++D++++VLGFW +WLFT+PSLR+RKPG       +EK ALDIAFL TP+ +   PF TK P  I+W N+  L ACY Y FTV   +     A  S PK +KF+  +LDFG+G+ERG     R+ +   K+
Sbjct:   87 VGLTQLLNPSKVVNLEKDIDALRASLAAPDLDSAVREEIIDQIAKKEFKKSNEMRGVMRDWLKAVFVGQSVLSVAICGLVSYDALPFLPNLDLAVRVLGFWGIWLFTIPSLRSRKPGGVWGMSNAEKNALDIAFLVTPLANLLAPFATKNPPDIFWLNMVVLSACYAYSFTVSPQESSGASADASLPKPIKFVLTALDFGAGRERGAPAVVREEMEMLKR 306          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGE3_CYCTE)

HSP 1 Score: 198 bits (504), Expect = 6.550e-59
Identity = 112/252 (44.44%), Postives = 155/252 (61.51%), Query Frame = 1
Query:  214 DEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALE------------------DGSGGDRKA--IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP--------HVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGF-TVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVR 882
            D E+  D   ++ +   ++AE GV LD+L+NPAKV+NLERDL  LR  L                   DG GG   A  I ++IAKKE  +  E+R   +GWLK VF+ QAV++ +L  +MAS+    F         ++D+SI+VLGFW   LF VPSLR+R+P  +EK ALDIAFL TP++S   P +TK+   I+ AN+  + A Y + F T G+ DD + G++  QP+WLKFI+KSLDFG+G+ERG R
Sbjct:    1 DVELTSDDPFVKSIDASIQAEVGVSLDELLNPAKVVNLERDLFNLRTELATLTGKVDLDIAGLPTDECDGGGGGEAADEIRQKIAKKEKDVALERRSVFRGWLKNVFLAQAVLSFVLSWIMASNPAQLFGGFDWFYSYNMDVSIKVLGFWXXXLFVVPSLRSRRPKGAEKKALDIAFLGTPLISIVAPALTKDTELIWGANLLVVAASYAFAFLTDGEDDDDDSGSN--QPEWLKFIYKSLDFGTGRERGAR 250          
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9N2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 7.080e-57
Identity = 110/252 (43.65%), Postives = 151/252 (59.92%), Query Frame = 1
Query:  211 TDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALE------------------DGSGGDRK--AIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP--------HVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVR 882
            +DEE+  D   +QR+ +E+  + GV LD L+NPA V+NLERDL  LR++L                   DG G   +  A+ + I KKE  LV E+R   +GWLK VF+ QAV++  +  +MA+D    F          +++ IQVLGFW   LF VPSLR+R+P   EK ALD+AF+ TP++S   P  TK+ + I+WAN A   A YGY +T+G  +D E   S + P+ LKFI+KSLDFGSG+ERG R
Sbjct:   78 SDEELTSDDPFVQRINDEIMRDMGVPLDGLLNPATVVNLERDLYNLRSSLATLTGLGEIDVGGLTTQECDGGGNSDEIDALRQTIEKKEKKLVVERRSVFRGWLKNVFLVQAVLSLGVSFVMATDPAILFGGFGWFYSYQMELPIQVLGFWXXXLFIVPSLRSRRPSGPEKKALDLAFIGTPLISLVAPVATKDALIIWWANFAVTAASYGYAYTIGDSEDDESDDSNT-PEALKFIYKSLDFGSGRERGAR 328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig909.17271.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized4.310e-18892.16protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.610e-18191.30protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.960e-8159.01protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical2.600e-7253.74protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical4.410e-7154.50protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Resistance9.980e-6448.23to phytophthora 1 protein n=3 Tax=Monodopsidaceae ... [more]
Hypothetical7.070e-6044.57protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical1.720e-5946.82protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical6.550e-5944.44protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Hypothetical7.080e-5743.65protein n=1 Tax=Leptocylindrus aporus TaxID=139809... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig909contigEcto-sp9_F_contig909:353..4437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score537.0
Seed ortholog evalue6.1e-150
Seed eggNOG ortholog2880.D8LL49
EggNOG OGs2BZA5@1,2QSK6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-25_000030.1
Exons7
Model size951
Cds size951
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930976.6250665-CDS-Ecto-sp9_F_contig909:352..5891622930976.6250665-CDS-Ecto-sp9_F_contig909:352..589Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 353..589 +
1692278976.1846027-CDS-Ecto-sp9_F_contig909:352..5891692278976.1846027-CDS-Ecto-sp9_F_contig909:352..589Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 353..589 +
1622930976.6422844-CDS-Ecto-sp9_F_contig909:1422..15001622930976.6422844-CDS-Ecto-sp9_F_contig909:1422..1500Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 1423..1500 +
1692278976.1995463-CDS-Ecto-sp9_F_contig909:1422..15001692278976.1995463-CDS-Ecto-sp9_F_contig909:1422..1500Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 1423..1500 +
1622930976.6579118-CDS-Ecto-sp9_F_contig909:1837..19211622930976.6579118-CDS-Ecto-sp9_F_contig909:1837..1921Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 1838..1921 +
1692278976.2116663-CDS-Ecto-sp9_F_contig909:1837..19211692278976.2116663-CDS-Ecto-sp9_F_contig909:1837..1921Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 1838..1921 +
1622930976.6775188-CDS-Ecto-sp9_F_contig909:2146..22631622930976.6775188-CDS-Ecto-sp9_F_contig909:2146..2263Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 2147..2263 +
1692278976.2206113-CDS-Ecto-sp9_F_contig909:2146..22631692278976.2206113-CDS-Ecto-sp9_F_contig909:2146..2263Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 2147..2263 +
1622930976.693508-CDS-Ecto-sp9_F_contig909:2865..30541622930976.693508-CDS-Ecto-sp9_F_contig909:2865..3054Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 2866..3054 +
1692278976.2290027-CDS-Ecto-sp9_F_contig909:2865..30541692278976.2290027-CDS-Ecto-sp9_F_contig909:2865..3054Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 2866..3054 +
1622930976.7126293-CDS-Ecto-sp9_F_contig909:3429..35671622930976.7126293-CDS-Ecto-sp9_F_contig909:3429..3567Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 3430..3567 +
1692278976.2374806-CDS-Ecto-sp9_F_contig909:3429..35671692278976.2374806-CDS-Ecto-sp9_F_contig909:3429..3567Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 3430..3567 +
1622930976.7245157-CDS-Ecto-sp9_F_contig909:4329..44371622930976.7245157-CDS-Ecto-sp9_F_contig909:4329..4437Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 4330..4437 +
1692278976.2461216-CDS-Ecto-sp9_F_contig909:4329..44371692278976.2461216-CDS-Ecto-sp9_F_contig909:4329..4437Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig909 4330..4437 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig909.17271.1prot_Ecto-sp9_F_contig909.17271.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig909 353..4437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig909.17271.1

>prot_Ecto-sp9_F_contig909.17271.1 ID=prot_Ecto-sp9_F_contig909.17271.1|Name=mRNA_Ecto-sp9_F_contig909.17271.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=317bp
AFHEADAFVPPTGGLAKAPSSAVHVSSTSTSSRRGCPGVDVRVRGVERSA
RPRRTGRQQQGQGGALMAQMTDEEMALDQALIQRVTEEVEAESGVELDQL
INPAKVINLERDLVKLRAALEDGSGGDRKAIEEEIAKKESTLVKEKRMYM
QGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTV
PSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVA
CYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDR
LNEKKQEKQEQEQEQE*
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mRNA from alignment at Ecto-sp9_F_contig909:353..4437+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig909.17271.1 ID=mRNA_Ecto-sp9_F_contig909.17271.1|Name=mRNA_Ecto-sp9_F_contig909.17271.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4085bp|location=Sequence derived from alignment at Ecto-sp9_F_contig909:353..4437+ (Ectocarpus species9 EcSCA_722f female)
GCTTTTCACGAGGCTGACGCCTTTGTGCCACCGACCGGAGGCTTGGCGAA GGCGCCCTCGTCCGCTGTGCATGTATCCAGCACCAGCACCAGCAGCCGGC GAGGTTGTCCGGGAGTTGATGTACGCGTACGGGGTGTTGAGAGGAGCGCA CGGCCGAGAAGGACAGGCCGACAGCAGCAAGGGCAAGGGGGTGCGCTTAT GGCTCAGATGACGGATGAGGAGATGGCCCTTGATCAGGTGAAGGGTCAAG GGTCAATGGTCAAGTGAGGCACAGCGGGGCAGTGTGCACTGCAAGCAGTA GAAGAGCCAGCGTTGTCGACTGGATTGCACGAAGGCAGAGATCGGGATGT AACACCACCCGCAAGCTTCTGAAGAGCACTATGAATGTGAAGTACACACA CGTTGCAAGTTCTGACAGACATACATCATACATAGTTCTGACATACATCA TACGTAGGTAGCTTGCCTTACCAATTCGAGATGCTCTCCGCAGCCAGCAC TTCGCTAGGCTCAGGGAGACTGCGCTGGCTTGACGGCTGAGGCTGATTGG TGCAAGACGAATCGACCGCAACCATCAAGCTTCTACATACGGGACTGGAG AAAGCGTGGTTTCGCATACTTGGAAGAACGACCCACCCTGCTCTCCGCGG CAACGCGAGTACAATAAGAGAGAAAAGAAGGGAGCAACAGATGGACGAAA AACGAAAACGTGGTGCATACAATTGTAGCCGTGTACGGTATGTTTCGGCC TCTTGGCGGTACAGTACCTTATGATATCCGTACCGGGCCAAGTGGCGCGG ACGCCTTCTGCGGTCACAGACTAACCACCCAAAATATGGGTACACAGCAG TTCTACCAATCAACGAACGGAGATGACCTGGACCCTGAAAATCCTCAAAC GAGATGACAGACAATCAATAATCTAACCGGGAGCCGAAAGACCCCTGGAA ACTACAATAGCATGATGAATACCACGATGAATGTTTACGATGATTTGCAC AATGATTCACGTGACGTGGCGATGATATACCTCGTACTCAAACTCAATGT CCCACGCTGGCGGTGATCAGGCATTGATCCAACGAGTTACGGAGGAGGTG GAGGCAGAGTCCGGGGTGGAACTGGACCAGCTCATCAATCCCGCCAAGGT AAAACAAAATCAGAACAGAACAATGACACCTTGCGGTGAAGGAGCGATGC ATTCACTGCAAGTCCGAATAACGACACCAATGTACAGTAGCCGTTGACAA CGCCCAGCGCCCAGTGGGACAATCGTCCAAGGAACGGTGGCTTTGACAGT ACTTTTTAGTAGTTATCATGATAGGGATAGAGTAGGCATCTGCACTTCAC GCGGGTTAAGATGTGGAGAATGGGATGGCGAGGCTGCCGGGAACCTCGAA TGCCAACCCCGACCCTTGCCTCAACAGCAATGCCAAACTTGTGGCTCACA CTAGCGTCCTGCTAACGTCCTCCCGTACTCCCCAGGTGATCAATCTAGAG AGGGATCTTGTCAAGCTTCGTGCTGCATTGGAAGACGGATCTGGAGGCGA CCGAAAGGCGATTGAGGAGGTACAGCAGCACCACTGTAGGTATTGCACCT AAAGTAGTAGGTATATGCATACATGGATGTTGATTTACCATCCTTTGTTT CTCTGCGACGGTGCATCCAACCAAGTGTGTAAACTATTAACTGTCGGCAT CACTAGGAGAGCAAGCGGATGCCTCCCAGGGCGGAGGGTGCAATGCTCTG CCCGTTTGGGATGCGAACTGAACAAACTGTCTTGTGACGTGCAGGAGATC GCCAAGAAGGAGTCCACGTTGGTGAAGGAAAAGCGCATGTACATGCAGGG CTGGCTCAAGAAGGTGTTCGTTGGGCAGGCCGTGATCACGACCATATTGG GAGGCTTGATGGTGAGCCTTCGCGCTTGCTTGGAGTATAACAGCGTGTGC GTGTTCTTGTCGTGGATGTGTCCAACGCTAGGGCGATTTCTTCTTCGTCT CCTCCAAGCTGGTAGGGTTTGTCCGCATCGCTCTCCCCCCTTTATTCTCA TGTATGAAAAACCTATGGTCAGATGTACCACCTGGCGCACATCAAGTGCC CCTCGGAAGCGGTCCTTATTTTCTGCGCACAGGGGAAGATGATGCACACG CATGCAGACCGGAGTTTTTTTCGTTCTTCTTGTCGGGCGAATGGCCTATT TTATATCTCATCAACGTCAACGTTATCACCCTTACCAACCTTACTAAATA TTTCCAACCTCGTGAACCGCGTCACCTTTTTGTCCACGATAAGAACGCTC TGACTACTATGTTATTCGCACGTCATTCGTGTGGTCAACAATGTTTTGCA CTGCTGCACTCAACCGTTGTCAACAACCTTTAGTCCGAACGCCTGTTCCA CGGTTGCTCTCGTGAGGCATACGCCGTCCGTAATCCATTCATGGGGCGTG TTGCCAGCTTCGAAAGAGAAGGCTTGCACTTGAGTGCTTTTTTTCGGCGT GTTTTTTCAACAGGCTAGCGACCAGGTACCGTTCTTCCCTCACGTGGACA TCTCCATCCAAGTGCTGGGATTCTGGTTCGTCTGGCTCTTCACGGTACCG TCGCTGAGAGCGAGAAAGCCAGGGGCGTCGGAGAAGGTGGCCTTGGACAT TGCCTTCCTCGCCACGCCGGTCGTGAGCTTCGCCATGCCCTTCGTCACGA AGGTCAGGGTCGTGCGAGGGAGAAATCGCACCCTTTGGTCAACCATGAAC CCGCTAAGCAGGCAGGAACTATTCGCCACACTTCTTGTGCCATCTCAAGC CAGTCAGCTTATCCCAAACAGCTCTTGCTGAACGGTCGCCGTCCTCAAGG CAGTACGGCACCAGCACACTCGCATTGCAGTACCGTGGTATGCTACAGCA GCGATACACCGGTACATCTCGTCGGCACCTAGTTTGAAACGAAAATTTTA GCCTTGGTTCCTCTAGCCTTTGGTGCTCAGTTTCCTAAGTTGGCGGTTTT CGCGTGAAAGCCTTGGGTAGATGCTCTGACGGTCATTTTCCACAACTTTT TGCGGGTTGCGATTCTTGCGCGTTCAGGAGCCGGTGCCAATCTATTGGGC GAACATCGCTACGTTGGTGGCATGCTACGGGTACGGGTTCACGGTAGGGA AGCCGGATGACGGAGAAGGAGGAGCTAGCAAGAGCCAACCCAAGTGGCTC AAGTTTATCTTCAAGGTGGGTCTCACAGGGGCGACACGAAAAAGCGCTTT TGTGATGCACATATGTATTAACACTGTTACCACCAGAGACAATGAGAGTG TGGAGAAGCACAGCTTGGAGTTGGGGATACACCGAAGTCGGTTTTGTCAT GGCGGCAAAGACGGTAAACAGGAACCAGAGCAAAACCCCGAGTATCTCGA CAGGGTTTGGTTGAAGTGGGCAAGGGTACTTGTAGAGGTTGTCGAAATCG TTGGCATTGTGAAGGGGGAGAGCCGGAGAAGTGCTTCCTTCGGCCATGCG GCCTATCAGCCCTCACTCGGAAAACAGCCGCTGAACGTGGCTATCGTTGT GGAGTTGTCTCATTAAACGTCCTCTCCTCTCTGTGCGCGCGGCTCGCTGT GGACTTGTCCCGTGCTTCTCTACATGCGCTCATGCCCCGGTTTGAAATCT TTCTTGCTGAGGTTTCGGTGTTTTTGCCCTACCGCACATTCCTGCAACAC CCCTCGTTCTGCTACGTCAACCTAATCGCCCCACCCCTCTGCTCCTCACA GGCAGGTGACACATACAGGAGTACTATTTTCACCAATTGAGAGCTCTTTT TTTATGTCGTCTCCCTCCCTTTGCCACTACACTCTCGTGCCTTTGAGTCG CTCCTCGCCAGACTGACAATCATCCAAATCGAGTTGCGTAGCGCTTGCTG TTCGTTGGTCTAAAGCAAAGCGTCGGGTGATACACGCCCAATTCGCGCCT CGCCTTACCCTTCCCACTCTTGGGCAGTCCCTCGACTTTGGTTCTGGGCA AGAGAGAGGCGTGAGAGGGGCTGCGCGAGACCGACTGAACGAAAAGAAGC AAGAGAAACAAGAACAAGAACAAGAACAAGAATAA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig909:353..4437+

>mRNA_Ecto-sp9_F_contig909.17271.1 ID=mRNA_Ecto-sp9_F_contig909.17271.1|Name=mRNA_Ecto-sp9_F_contig909.17271.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1902bp|location=Sequence derived from alignment at Ecto-sp9_F_contig909:353..4437+ (Ectocarpus species9 EcSCA_722f female)
GCTTTTCACGAGGCTGACGCCTTTGTGCCACCGACCGGAGGCTTGGCGAA
GGCGCCCTCGTCCGCTGTGCATGTATCCAGCACCAGCACCAGCAGCCGGC
GAGGTTGTCCGGGAGTTGATGTACGCGTACGGGGTGTTGAGAGGAGCGCA
CGGCCGAGAAGGACAGGCCGACAGCAGCAAGGGCAAGGGGGTGCGCTTAT
GGCTCAGATGACGGATGAGGAGATGGCCCTTGATCAGGCTTTTCACGAGG
CTGACGCCTTTGTGCCACCGACCGGAGGCTTGGCGAAGGCGCCCTCGTCC
GCTGTGCATGTATCCAGCACCAGCACCAGCAGCCGGCGAGGTTGTCCGGG
AGTTGATGTACGCGTACGGGGTGTTGAGAGGAGCGCACGGCCGAGAAGGA
CAGGCCGACAGCAGCAAGGGCAAGGGGGTGCGCTTATGGCTCAGATGACG
GATGAGGAGATGGCCCTTGATCAGGCATTGATCCAACGAGTTACGGAGGA
GGTGGAGGCAGAGTCCGGGGTGGAACTGGACCAGCTCATCAATCCCGCCA
AGGCATTGATCCAACGAGTTACGGAGGAGGTGGAGGCAGAGTCCGGGGTG
GAACTGGACCAGCTCATCAATCCCGCCAAGGTGATCAATCTAGAGAGGGA
TCTTGTCAAGCTTCGTGCTGCATTGGAAGACGGATCTGGAGGCGACCGAA
AGGCGATTGAGGAGGTGATCAATCTAGAGAGGGATCTTGTCAAGCTTCGT
GCTGCATTGGAAGACGGATCTGGAGGCGACCGAAAGGCGATTGAGGAGGA
GATCGCCAAGAAGGAGTCCACGTTGGTGAAGGAAAAGCGCATGTACATGC
AGGGCTGGCTCAAGAAGGTGTTCGTTGGGCAGGCCGTGATCACGACCATA
TTGGGAGGCTTGATGGAGATCGCCAAGAAGGAGTCCACGTTGGTGAAGGA
AAAGCGCATGTACATGCAGGGCTGGCTCAAGAAGGTGTTCGTTGGGCAGG
CCGTGATCACGACCATATTGGGAGGCTTGATGGCTAGCGACCAGGTACCG
TTCTTCCCTCACGTGGACATCTCCATCCAAGTGCTGGGATTCTGGTTCGT
CTGGCTCTTCACGGTACCGTCGCTGAGAGCGAGAAAGCCAGGGGCGTCGG
AGAAGGTGGCCTTGGACATTGCCTTCCTCGCCACGCCGGTCGTGAGCTTC
GCCATGCCCTTCGTCACGAAGGCTAGCGACCAGGTACCGTTCTTCCCTCA
CGTGGACATCTCCATCCAAGTGCTGGGATTCTGGTTCGTCTGGCTCTTCA
CGGTACCGTCGCTGAGAGCGAGAAAGCCAGGGGCGTCGGAGAAGGTGGCC
TTGGACATTGCCTTCCTCGCCACGCCGGTCGTGAGCTTCGCCATGCCCTT
CGTCACGAAGGAGCCGGTGCCAATCTATTGGGCGAACATCGCTACGTTGG
TGGCATGCTACGGGTACGGGTTCACGGTAGGGAAGCCGGATGACGGAGAA
GGAGGAGCTAGCAAGAGCCAACCCAAGTGGCTCAAGTTTATCTTCAAGGA
GCCGGTGCCAATCTATTGGGCGAACATCGCTACGTTGGTGGCATGCTACG
GGTACGGGTTCACGGTAGGGAAGCCGGATGACGGAGAAGGAGGAGCTAGC
AAGAGCCAACCCAAGTGGCTCAAGTTTATCTTCAAGTCCCTCGACTTTGG
TTCTGGGCAAGAGAGAGGCGTGAGAGGGGCTGCGCGAGACCGACTGAACG
AAAAGAAGCAAGAGAAACAAGAACAAGAACAAGAACAAGAATAATCCCTC
GACTTTGGTTCTGGGCAAGAGAGAGGCGTGAGAGGGGCTGCGCGAGACCG
ACTGAACGAAAAGAAGCAAGAGAAACAAGAACAAGAACAAGAACAAGAAT
AA
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