mRNA_Ecto-sp9_F_contig908.17266.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Aa_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE) HSP 1 Score: 313 bits (801), Expect = 4.180e-97 Identity = 192/453 (42.38%), Postives = 247/453 (54.53%), Query Frame = 1
Query: 118 LSNESGVLLARPDENQKRNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGE--------EWRAKMKSAPRKL------------------EFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTG---WWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVW-TAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTP--REGKG 1380
L N + V A +++ NS V+T LVLNYMIGSGILN+PQ F SGI T+LY ++ A+WLG V LI A E + P +L EFA LA +T+ P L VD +IVL N G VCSYVIL+G L SLL LE+F T WW SF VTP + V ++HF +L W+A S CTI + +V A+ R LD +VWW+W+G+ +GS+VFAL+CAPA H+Y+ M ++ W V T ++++G +CY GL GYLSFRD+VDGDIL N SG V K V HL+ YIP EVIV+R SL+ L G K +V+E +V W T +L L+V + L G A GD+FG ILD+TGGVAAS T+FVLP LIYL REG+G
Sbjct: 74 LGNSTDVFAA--GSSRRDNSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVSAVAIWLGIVVLINASEISFPHGYARTGTSSDNGPNELAEGGGXXXXXXADPLDDIEFAQLARETVGPLGP------------------LAVDAAIVLCNFGDVCSYVILVGSLTGSLL---LEWFGGTASDVWWASFSVVTPVMAVLFVFPPCLIRHFSNLRWLAVFSFCTICSVVALVVIGGPIYASEERAEPDHDPDLDTSVVWWDWVGALANLGSIVFALSCAPAVLHAYSSMTPQSTRAWRSVATWALVVGACLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKTAVVVHLILYIPSEVIVMRHSLYALRG-KDVMVAEFGQVAWVTFALLALVVGAMVGLNTVGVAQGDMFGYILDITGGVAASATSFVLPGLIYLGATGDREGRG 502
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Transmembrane (amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI) HSP 1 Score: 262 bits (670), Expect = 2.170e-78 Identity = 165/404 (40.84%), Postives = 211/404 (52.23%), Query Frame = 1
Query: 151 PDENQKRNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGE--------EWRAKMKSAPRKL------------------EFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTG---WWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVW-TAGILGLIVLTVSQLKITGAADG 1272
P +++ NS V+T LVLNYMIGSGILN+PQ F SGI T+LY ++ A+WLG V LI A E + P +L EFA LA +T+ P L VD +IVL N G VCSYVIL+G L SLL LE+F T WW SF VTP + V ++HF +L W+A S CTI + +V A R LDA +VWW+W+G+ +GS+VFAL+CAPA H+Y+ M R+ W V T ++ +G +CY GL GYLSFRD+VDGDIL N SG V K V HL+ YIP EVIV+R SL+ L G K +V+E +V W T +L L V + L G A G
Sbjct: 83 PGSSRRDNSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVSAVAIWLGIVVLINASEISFPQGYARTGTSSDNGPSELAGGRGXXXXXXADRLDDIEFAQLARETVGPLGP------------------LAVDAAIVLCNFGDVCSYVILVGSLTGSLL---LEWFGGTASDVWWASFSVVTPVMAVLFVFPPCLIRHFSNLRWLAVFSFCTICSVVALVVIGGPIYANEERAEPGHDPDLDASVVWWDWVGAVANLGSIVFALSCAPAVLHAYSSMTPRSTRAWRSVSTWALGVGVCLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKAAVVVHLILYIPSEVIVMRHSLYALRG-KDVMVAEFGQVAWVTFALLALAVGAMVGLNTVGVAQG 464
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 226 bits (575), Expect = 8.700e-65 Identity = 153/439 (34.85%), Postives = 216/439 (49.20%), Query Frame = 1
Query: 151 PDENQK-RNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTGWWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNT-PREGKGQYHTACTLLYWLGGALMVIVPVAVFKS 1461
P E +K +N T FL+LN MIGSGILN PQ F DSGI ++Y I+C A+WLG LI G +A L F +A D L+VD SIV+ N G++ SY++++ G T LL E W+ S F P VL + +G ++ S+ IS + V ++ + A R A + W++ G+F +GS +FAL+CA AAFH++ M+ T W T +V++G GMC GL GYLSFRD +GDIL N SG +K+L+ HL+ YIP + +V+R S+ + G D + A +V TA +L V L G A+GD FG ILD TGG+ A + +F+ P YL PR+ + A LL + G +V+ P A S
Sbjct: 53 PFETKKPKNGRGGTIFLILNTMIGSGILNQPQVFADSGIIGAFLMYGISCYAIWLGLQLLIEVGVAHKA--------LGFTEVANLAFGRRGD------------------LLVDWSIVVGNFGALLSYMVVISGELTVLLEGWTG--ESGKWYTSELFNLPLATLFLVLPFCLQRFYGHFVLISIFSIFAISTVLVVVLFFGPTVGADDR-------AASGAINWFSLSGTFSSLGSALFALSCAYAAFHAFEAMRRNTGAAWAGATTPAVVIGAGMCTSMGLAGYLSFRDYTEGDILDNFSGSGWDFMKILLIIHLLLYIPIDFVVMRHSVCKIFGWNVDTMHIAPYLVLTAILLAFTAGCVMALYAVGVAEGDAFGYILDFTGGLTAPILSFICPGAFYLKLMPRKDAPNWDLAFALLIF-GFITIVLAPAATIYS 455
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Transmembrane (amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L5_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.580e-60 Identity = 148/420 (35.24%), Postives = 212/420 (50.48%), Query Frame = 1
Query: 166 KRNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTGWW--DSF----YFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSH--ADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTPREGKGQYHTACT 1401
+R+ T FL+ IGSGI+N PQ + SG+ T LY I AVWLGSV ++++ + +K + L++A LA T P S VDGSI + N + SYV+L+G S+ SEL++ GW DSF YF TP + V + L H+ ++ L + I + ++ + ++ R TVG + +W+ +G +K GSV+FA + A H+Y + RT W+ V+T ++ G MC GL GYLSFR+ VDG+IL+N G+ G LK+L+ HLV Y P E +VLR S+ L +P +S A RV T I+G +V L TG + G FG ILD+ GGVA S F+LPA+I+L G ACT
Sbjct: 25 QRHGIAATMFLI----IGSGIMNQPQVWMMSGVIGTPFLYVICFSAVWLGSVMVVKSADN----LKLVGKNLDYAVLAHTTHGPMG------------------SFAVDGSIAVYNATACLSYVLLIG----SMTSELVQ-----GWSGSDSFVTQSYFTTPIMALLFVFPLGLLPHYTHTQKLSILGVAAIVVVVAVVLFYGPVCSEGKQVRAETVGA------INYWSTVGMVQKAGSVIFAFSYPHAIVHAYIGLTPRTTKAWKIVVTGAMSAGAFMCLCMGLAGYLSFREEVDGNILTNFVGWVGDALKILLVAHLVWYTPQEFVVLRHSILRLAKQEPLAMSTALRVGSTFAIIGCLVAICIALDATGVSSGTAFGIILDIGGGVAGSFAAFILPAIIFLRYGVRGS-----ACT 398
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 202 bits (513), Expect = 1.140e-55 Identity = 136/409 (33.25%), Postives = 206/409 (50.37%), Query Frame = 1
Query: 154 DENQKRNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTG-WWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTET--EWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTPRE 1371
+ N N T FL+LN MIGSGILN Q F ++G+ T +LY + LG LI+AG ++SA +L F LA D L+ D +++L N G + SY ++GG +L +L+ + W+ Y V P VV A+L + + FG +V+ LS+ I+ + + ++ ++ GK P++W + G +K GSVVFA+ CA AAFH++ ++ +T +W+RV + ++++G MC TGL GYL FR + GDIL N G KVL+ HL+ YIP + +V+R S +LG + VV T G+L + V L G ++GD FG ILDLTGGV ++ FVLP + Y ++
Sbjct: 56 ESNAPENGIGGTMFLLLNTMIGSGILNQAQVFSEAGVIGTLLLYVAGGYTIHLGLELLIKAG------VRSA--RLGFTELAHHAYGRRGD------------------LLTDWTVILCNFGGLLSYFTVVGGQTCDILKDLVGASDGDSRWYTQEYAVLPVVVALAILPLCLTRRFGHFVYVSYLSISAIAAVVLCVLIAGPSE---------GKQYRSEPILWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGIFYARLNKD 429
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USJ8_9STRA) HSP 1 Score: 186 bits (472), Expect = 8.630e-50 Identity = 130/430 (30.23%), Postives = 207/430 (48.14%), Query Frame = 1
Query: 172 NSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSEL--LEYFEVTGWWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAW--RVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPAL--IYLNTPREGKGQYHTACTLLYWLGGALMVIVP 1443
N T L++N MIGSGILN P F +GI AT ++Y I A WLG V LIRAG K KS ++ + LA D + D + + N G++ SY+ ++GG A+ +L E+ L ++ + + P +V L + + +G ++ +S+ +I+ + ++ + G D P+VW+N++G+ ++GS VFA C+ A FH+YN M ++ ++++ +V++G MC TGL GYL FR +GDIL N +G ++L+ HL+ YIP + +V+R S L K D W + T +L + V L G ++GD F ILD GG+ S ++LPA+ +YL E A LL W G +++ VP
Sbjct: 60 NGGGATIVLLINTMIGSGILNQPYVFSQAGIGATLIIYAITAYATWLGLVLLIRAGT----KAKS----MDLSDLAGYCFGDVGDK------------------LTDIFVAVGNFGALLSYLTVIGGEASEMLGEIGDLSGSDMVKEFGKIQIILPIIVVLFSLPLCLTRLYGHFVMISTISIFSITCVMGLVLFYGP---------IAGSNYQDEPVVWFNFLGAVEELGSTVFAFACSYAVFHAYNSMDPGSQKGFDKLAGVTVMIGAFMCLVTGLAGYLCFRSHTEGDILDNFTGPAFYFFRLLLIVHLLLYIPLDFVVMRYSFLKLF--KLDAADLHWFPYTLVTVALLFVTTFVVVVLYDEGLSEGDAFDYILDFFGGLTGSYLGYILPAISFLYLAKNAEDPWTLFQAKVLLVW-GVLVILFVP 451
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U5_9STRA) HSP 1 Score: 181 bits (458), Expect = 8.000e-48 Identity = 123/434 (28.34%), Postives = 208/434 (47.93%), Query Frame = 1
Query: 172 NSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTGWWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTPREGKGQYHT----ACTLLYWLGGALMVIVPVAVFKS 1461
N + T L++N MIG+GILN P F +GI VLY +A VWLG+ +++AG RK++ L+ G + + + + D I + G + +Y++++ G +LS++ WW + + P +V + +HFG L V+ +S+ +I + ++ + G+ ++ ++ G + GSVVFA+T +F ++N ++ + + W V + +G MC+ TGL GYLSFR A +G+IL N SG K L+ HL+ YIP + +V+R SL L + + + A +V + +L + V L G A+G++F +++ LTGGVA + +FVLP ++L + Y T + LL W G +M+IVP VF
Sbjct: 63 NGELGTVILLINTMIGAGILNQPYVFSKAGILGACVLYVLALGTVWLGANLVVQAG-----------RKVDQMDLSAV----------GGYCYGILGCG-----LTDFMIAVATFGGLLAYMVVISGEVVDMLSDIPN--SEDQWWTNISILLPVIVLLFCVPTCLTRHFGHLVLVSTISVFSICCVMALVIVYGP---------IAGREYQHERILIFSLTGMLTECGSVVFAVTYITGSFFAFNSLELKNQARWPIVSAKASCMGTFMCFITGLSGYLSFRSATNGEILLNFSGGWAYFTKTLLVAHLLLYIPIDFVVMRHSLVKLFNKEAEKLHTAPFIVLSVMLLAVTTALVVFLYSKGLAEGELFSSVISLTGGVALAFVSFVLPGAVFLKVFAKEIKLYQTWYWMSAGLLCW-GITVMIIVPYYVFND 458
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M2K4_HETAK) HSP 1 Score: 162 bits (411), Expect = 2.640e-42 Identity = 100/292 (34.25%), Postives = 155/292 (53.08%), Query Frame = 1
Query: 505 LQNTGSVCSYVILLGGLATSLLSELLEYFEVTG-WWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTET--EWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTPRE 1371
L N G + SY ++GG +L +L+ + W+ Y V P VV A+L + + FG +V+ LS+ I+ + + ++ ++ GK P++W + G +K GSVVFA+ CA AAFH++ ++ +T +W+RV + ++++G MC TGL GYL FR + GDIL N G KVL+ HL+ YIP + +V+R S +LG + VV T G+L + V L G ++GD FG ILDLTGGV ++ FVLP + Y ++
Sbjct: 11 LCNFGGLLSYFTVVGGQTCDILKDLVGASDGDSRWYTQEYAVLPVVVALAILPLCLTRRFGHFVYVSYLSISAIAAVVLCVLIAGPSE---------GKQYRSEPILWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGIFYARLNKD 293
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Aa_trans (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFY3_9ARCH) HSP 1 Score: 152 bits (385), Expect = 2.210e-37 Identity = 119/444 (26.80%), Postives = 212/444 (47.75%), Query Frame = 1
Query: 136 VLLARPDENQKRNSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTGWWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTI-SFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSYNPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGMKPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNT-PREGKGQYHTACTLLYWLGGALMVIVPVAVFKS 1461
+L +E +NS+ T FL+LN MIGSGI+ F +GI AT Y I ++ G V IR+ + +AK+ +A LA T V + ++D SIV+ N G++ SY++++G L++ +L + W+ + F+T F + + + +++FG L+ ++ +S+ I S +F+ ++ D D + ++IG + +G +VFAL A FH+Y+ M+++ + + + + G MC+ GL GYL F D + +IL N +G G V K+ + HL+ YIPG+ ++ R+SL L ++ V T ++ I L L++T +G +++++GG+A S+ F++P L P E + Y + L G +M++V V S
Sbjct: 63 ILPPEGEEVHIKNSNQATIFLLLNTMIGSGIVVQAYVFSQAGIVATIFEYIIVGIMMYQGVVLCIRSAD--KAKI------FHYAQLAEYT------------------VGNIGRYLIDVSIVINNAGALLSYILIIGTLSSDVLQTFSGCND-NDWYCNAGFLTLFPIIFFTIPLCLIRNFGHLALISYISIAVIVSIIFLVLIGGPVRAVYYTNDD-------DRHVKTGSFIGCIQTVGDIVFALGYITAIFHAYDGMQDKNVPAFTHNVFVTQVAGVLMCFIIGLVGYLCFLDNTETNILENFTGDVGAVFKIGLIVHLILYIPGDFVIFRASLLKLCDRDVQKQNDFEFVTQTLSLIAFITLIAIILQVT-VPNGTALNAVINVSGGIAGSVVYFIVPGLCGKRLFPEEPQTVYLSYA--LIGFGVVIMILVLVGTALS 469
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ43_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.710e-37 Identity = 127/433 (29.33%), Postives = 194/433 (44.80%), Query Frame = 1
Query: 172 NSSVMTGFLVLNYMIGSGILNTPQTFRDSGIAATTVLYCIACPAVWLGSVALIRAGEEWRAKMKSAPRKLEFAALATDTLAPTSDAPDGVWLFPCMPVEHNWSLIVDGSIVLQNTGSVCSYVILLGGLATSLLSELLEYFEVTGWWDSFYFVTPFVVFTAVLYISSLKHFGDLSWVAGLSLCTISFLFVYIVTWSHADAAAARDLTVGKTALDAPLVWWNWIGSFRKIGSVVFALTCAPAAFHSY--NPMKNRTETEWERVLTTSVILGGGMCYFTGLFGYLSFRDAVDGDILSNLSGFCGRVLKVLVAFHLVCYIPGEVIVLRSSLFGLLGM-KPDVVSEAWRVVWTAGILGLIVLTVSQLKITGAADGDIFGNILDLTGGVAASLTNFVLPALIYLNTPREGKGQYHTACTLLYWLGGALMVIVPVAVFKS 1461
NS+ +T FL+LN MIGSGILN P F +SGI + + I A W G + L AG LE++ LA FP L+VD +I++ GS Y++++G L++ LL G D F + VF V + +HFG L+ ++ S+ I + + + A +V + + L N G +GS+VF++ C A F ++ K+R W V +V G MC GL GYLSF +G+IL N + V K++V HL+ YIP +++R S+ + + +++ A + T G+L V V L G G F +L++TGG+ SL ++PA IYL + Y A LL + G A+M+ V S
Sbjct: 67 NSAYLTTFLLLNTMIGSGILNQPYVFAESGILGGLLGFFITTIATWTGLLCLTEAGVH--------ENILEYSGLAKKA-------------FPAFG-----ELMVDIAIIVLTFGSQLGYILVVGTLSSDLLRSWGCSSVACG--DMFTTIISVAVF--VTPVCMYRHFGHLAILSLFSIAAIVAVLLLVFI------AGPIKHSVDHKSSNYKLFDLN--GMLTSVGSIVFSMECCSANFQAFVSTERKSRNMNTWRSVTGVAVFAGAIMCASMGLVGYLSFGSDTEGEILDNFTQHGYDVFKLMVVIHLILYIPVNFVIMRYSIVKVFFQTRSELLPSATHSIITIGLLAATVGIVLLLLGLGLESGAAFSLLLNITGGIGGSLEMLIIPAAIYLQVMPKDAKFYKYAMVLLVF-GFAVMIAVTAVTIIS 460 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig908.17266.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig908.17266.1 >prot_Ecto-sp9_F_contig908.17266.1 ID=prot_Ecto-sp9_F_contig908.17266.1|Name=mRNA_Ecto-sp9_F_contig908.17266.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=488bp QVFLSLVLPWQGKAVNTMVVPYGTIPINEVGSGTATPPLLSNESGVLLARback to top mRNA from alignment at Ecto-sp9_F_contig908:20327..26406+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig908.17266.1 ID=mRNA_Ecto-sp9_F_contig908.17266.1|Name=mRNA_Ecto-sp9_F_contig908.17266.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6080bp|location=Sequence derived from alignment at Ecto-sp9_F_contig908:20327..26406+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig908:20327..26406+ >mRNA_Ecto-sp9_F_contig908.17266.1 ID=mRNA_Ecto-sp9_F_contig908.17266.1|Name=mRNA_Ecto-sp9_F_contig908.17266.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2928bp|location=Sequence derived from alignment at Ecto-sp9_F_contig908:20327..26406+ (Ectocarpus species9 EcSCA_722f female)back to top |