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Homology
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGV7_ECTSI) HSP 1 Score: 678 bits (1749), Expect = 5.440e-245 Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVE 984
ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQ TKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVE
Sbjct: 59 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQ-TKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVE 385
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8E9_9STRA) HSP 1 Score: 503 bits (1294), Expect = 1.790e-175 Identity = 238/330 (72.12%), Postives = 273/330 (82.73%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGP-QQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
E+ RFH DYV FL KV P + T P QQ +F+VGE TDCPV+EGL+ F Q +GASIDGA+KLNH D+ INWSGGLHHAKKAEASGFCY+NDIVLAILELLKYH+RVLYIDIDIHHGDGVEEAFY TDRVMT SFHKYGDFFPGTG I D+GAK GKYYSVNFPL+EG+DD S++S+F+PV+ K+ME+Y+P+A+VLQCGADSLTGDRLGCFNLTLKGH E V+ VK FGVP+LVLGGGGYTIRNVARCWAYET V+L + E IPYNDY+EYYAPDFKLHLTPS MENLN +EL+R VL L L+GAPS+ + +V
Sbjct: 58 EMTRFHSDDYVKFLSKVSP-----ESTRPFLQQMAQFNVGECTDCPVYEGLFEFQQIASGASIDGAVKLNHGACDVAINWSGGLHHAKKAEASGFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVEEAFYCTDRVMTCSFHKYGDFFPGTGAITDLGAKKGKYYSVNFPLKEGMDDASYQSVFEPVIEKIMEVYKPTAIVLQCGADSLTGDRLGCFNLTLKGHGECVRFVKGFGVPLLVLGGGGYTIRNVARCWAYETSVVLDTPLGEDIPYNDYYEYYAPDFKLHLTPSMAMENLNEREELERTTQEVLENLSALKGAPSLTLQDV 382
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7B8_9STRA) HSP 1 Score: 501 bits (1289), Expect = 8.330e-175 Identity = 229/326 (70.25%), Postives = 276/326 (84.66%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQM 978
+L +FH DYV FL+K+ P + + Q KF++GE+TDCPVF+G+Y FC +YTG SIDGA+KLNH + DI +NWSGGLHHAKK EASGFCY+NDIVLAILELLK++ RVLYIDID+HHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKD+G K+GKYYSVN PLQ+GIDD S+E++FKPV++K+MEMY+P+A+VLQCGADSLTGDRLGCFNLTL GHA+ V++VKSF VP LVLGGGGYT+RNVARCW YET VLLG +I + +PYND+FEYYAPDF+LHLTP+ NLN + LD + +L+ L+ LQGAPS+QM
Sbjct: 13 QLQQFHSEDYVEFLKKINPDNLKQLSS----QMQKFNLGEYTDCPVFDGVYDFCSTYTGCSIDGAVKLNHGLTDIAVNWSGGLHHAKKMEASGFCYINDIVLAILELLKHNPRVLYIDIDVHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDIGVKAGKYYSVNVPLQDGIDDASYETVFKPVLDKIMEMYRPTAIVLQCGADSLTGDRLGCFNLTLHGHAKCVEYVKSFHVPTLVLGGGGYTVRNVARCWTYETSVLLGVDIPDELPYNDFFEYYAPDFRLHLTPT-DAPNLNKREHLDGITARILQNLKNLQGAPSVQM 333
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUZ9_9STRA) HSP 1 Score: 498 bits (1282), Expect = 2.350e-174 Identity = 229/329 (69.60%), Postives = 273/329 (82.98%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
E+MRFH DY NFL++V P R Q +F+VGE+TDCPVF+GL+ +CQ YTG S+DGA+KLNH + DI +NWSGGLHHAKK EASGFCYVNDIVLAILELLKYH RVLY+DIDIHHGDGVEEAFY TDRVMT+SFHKYGDFFPGTGD+KD+G+ GKYYSVNFPLQEG+ D ++++IF+PV+ KVME Y+PSAV+LQCGADS+TGDRLGCFNL+LKGHAE VK+++ F VPMLVLGGGGYTIRNVARCWAYET VLL +EID IP NDY+EY+ PD+ LHL PS +++N N+ + L+R K +L L LQGAP +QM EV
Sbjct: 14 EVMRFHSEDYTNFLQRVSPDNVRSL----THQMQRFNVGEYTDCPVFDGLFEYCQVYTGCSLDGAVKLNHGLTDIAVNWSGGLHHAKKQEASGFCYVNDIVLAILELLKYHPRVLYVDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGDLKDMGSGGGKYYSVNFPLQEGMTDETYQTIFRPVMAKVMECYRPSAVILQCGADSITGDRLGCFNLSLKGHAECVKYMQEFNVPMLVLGGGGYTIRNVARCWAYETAVLLDQEIDNKIPMNDYYEYFGPDYNLHLVPS-NVDNANSREYLERCKVHILEMLGGLQGAPGVQMQEV 337
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U991_9STRA) HSP 1 Score: 500 bits (1287), Expect = 5.430e-173 Identity = 231/329 (70.21%), Postives = 272/329 (82.67%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
E+ RFH DY++FL +V P + Q Q KF++G FTDCPVF+GL+ F Q YTG S+DGA+KLNH + D+ +NWSGGLHHAKK+EASGFCYVNDIVLAILELLKYH RVLY+DIDIHHGDGVEEAFY TDRVMT+SFHK+G+FFPGTGDIKD GAK GKYYSVN PLQEG+DD SF +FK ++ KVMEMY+P+AVVLQCGADSLTGDRLGCFN+TL+GH V+++K+F VPMLVLGGGGYTIRNV+R W YET +LLG++I +AIPYNDYFEYY PDFKLHL P+P MEN N LD T+L+QL TLQGAPS+Q+ EV
Sbjct: 107 EMTRFHSDDYIDFLSRVTPDNLKTF----QSQMQKFNIGAFTDCPVFDGLFEFTQIYTGCSLDGAVKLNHGLTDVAVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHPRVLYVDIDIHHGDGVEEAFYCTDRVMTVSFHKFGEFFPGTGDIKDTGAKEGKYYSVNCPLQEGMDDESFVQVFKRIMAKVMEMYRPTAVVLQCGADSLTGDRLGCFNVTLRGHGACVEYLKTFNVPMLVLGGGGYTIRNVSRLWTYETSLLLGQDIGDAIPYNDYFEYYGPDFKLHLRPNPQMENQNGRDHLDFCVNTILQQLGTLQGAPSVQLQEV 431
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDT3_9STRA) HSP 1 Score: 493 bits (1270), Expect = 1.760e-171 Identity = 224/324 (69.14%), Postives = 273/324 (84.26%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSM 972
E+ +FH DY++FL +V P + Q Q TKF+VGE+TDCPVF ++ FC YTGAS+DGAI+LNH +AD+ INW+GGLHHAKK+EASGFCYVNDIVLAILE+LKYH RVLYIDIDIHHGDGVEEAFY TDRVMT+SFHK+GDFFPGTGDI DVG GKYY+VNFPL+EGIDD S+E +FKPV+++VMEMY+P+AVVLQCGADSL+GDRLGCFNL+LKGHA+ V++VKSF VP LVLGGGGYT+RNVARCWAYET VL+G E+ + +PYNDYFEYY PD++LH+TPS +M N+N P+ LD +K + L+ L+ APS+
Sbjct: 60 EMTKFHSPDYIDFLSRVSPDTLKTY----QSQMTKFTVGEYTDCPVFADMFDFCSMYTGASLDGAIRLNHGLADVAINWAGGLHHAKKSEASGFCYVNDIVLAILEMLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKFGDFFPGTGDIHDVGEADGKYYAVNFPLKEGIDDLSYEHVFKPVISRVMEMYRPTAVVLQCGADSLSGDRLGCFNLSLKGHADCVEYVKSFNVPTLVLGGGGYTMRNVARCWAYETSVLVGTELPDELPYNDYFEYYGPDYRLHITPS-NMANMNEPRYLDDIKVKLFEMLRELEAAPSV 378
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CEU7_9STRA) HSP 1 Score: 493 bits (1268), Expect = 2.340e-171 Identity = 238/347 (68.59%), Postives = 271/347 (78.10%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMP---------GPARG---QGTGPQ------QQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
E+ RFH +Y+ FL ++ P ARG Q G QQ F+VGE+TDCPVF+GL+ FC YTGASIDGA KLN DI +NWSGGLHHAKK EASGFCYVNDIV+AILELLK H+RVLYIDIDIHHGDGVEEAFY TDRVMT+SFHKYGDFFPGTGD+KDVG + GKYYSVN PL+EG+DD ++ +FKPV+ KVME++QP AVVLQCGADSLTGDRLGCFNLTLKGHAE VK VKSF VP LVLGGGGYTIRNVARCW YET VLL +++ + IPYNDYF+YY DFKLHLTP+ ENLNT + LD + +L LQTLQGAPS+QM EV
Sbjct: 58 EMARFHAPEYIEFLRRITPDSSAILSQTASARGVLSQAVGASATQSLAQQMQGFNVGEYTDCPVFDGLFEFCSIYTGASIDGACKLNQGNCDIAVNWSGGLHHAKKGEASGFCYVNDIVVAILELLKRHARVLYIDIDIHHGDGVEEAFYLTDRVMTVSFHKYGDFFPGTGDLKDVGVRQGKYYSVNCPLREGMDDKAYAQVFKPVIQKVMEVFQPGAVVLQCGADSLTGDRLGCFNLTLKGHAECVKFVKSFRVPTLVLGGGGYTIRNVARCWTYETAVLLDQQLSDDIPYNDYFDYYGSDFKLHLTPAA-AENLNTKESLDHCRNRILENLQTLQGAPSVQMHEV 403
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q394_9STRA) HSP 1 Score: 490 bits (1261), Expect = 2.280e-170 Identity = 233/329 (70.82%), Postives = 268/329 (81.46%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
EL FH DYV+FL ++ P R Q KF+ G+ TDCPVF+GL+ F Q YTGASIDGAIKLN++ DI INWSGGLHHAKK+EASGFCY+NDIVLAILELLK H+RVLYIDID+HHGDGVEEAFY TDRVMTLS HKYGDFFPGTG IKDVGAK G YSVN PL G+ D ++E IFKPV++K+ME++QP A+VLQCGADSLTGDRLGCFNL+LKGHAE VK+VKSF +P LVLGGGGYTIRNVARCWAYET VLL +I IPYNDYFEYYAPD++LHLTP P EN+NT L+ ++ +L+QLQ LQGAPS+QM EV
Sbjct: 59 ELAAFHSEDYVSFLSRITPDNLRQFSA----QMQKFNAGDMTDCPVFDGLFEFAQLYTGASIDGAIKLNNNETDIAINWSGGLHHAKKSEASGFCYINDIVLAILELLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTLSLHKYGDFFPGTGHIKDVGAKEGTGYSVNAPLTSGMTDKAYEDIFKPVMDKIMEIFQPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVKYVKSFNIPTLVLGGGGYTIRNVARCWAYETSVLLDADIPNEIPYNDYFEYYAPDYELHLTPEPR-ENMNTDASLEAVRVELLQQLQELQGAPSVQMQEV 382
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCX6_9STRA) HSP 1 Score: 490 bits (1262), Expect = 9.630e-170 Identity = 231/345 (66.96%), Postives = 270/345 (78.26%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPG---------------PARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKE--IDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVE 984
E+ RFH +Y+ FL+++ P P + G Q +F+VGE+TDCPVF+GLY FC YTGASIDGA KLN DI +NWSGGLHHAKK EASGFCYVNDIV+ ILELLK H+RVLYIDIDIHHGDGVEEAFY TDRVMT SFHKYGDFFPGTGD+KDVG K+GKYYSVN PL+EG+DD ++ +FKPV+ K+M++++P AVVLQCGADSLTGDRLGCFNL+LKGHAE VK VKSF +P LVLGGGGYTIRNVARCW YET VLL + I E IPYNDYF+YY+PDFKLHLTP+ ENLNT + L+ ++ +L LQTLQGAPS+QM E
Sbjct: 60 EMARFHSPEYIEFLKRITPDTAAILSQTTQAQKMQPGQNGGASLSAQMQRFNVGEYTDCPVFDGLYEFCSIYTGASIDGACKLNQGDCDIAVNWSGGLHHAKKGEASGFCYVNDIVVGILELLKRHARVLYIDIDIHHGDGVEEAFYLTDRVMTASFHKYGDFFPGTGDLKDVGVKAGKYYSVNCPLREGMDDKAYAQVFKPVIQKIMDVFRPGAVVLQCGADSLTGDRLGCFNLSLKGHAECVKFVKSFNIPTLVLGGGGYTIRNVARCWTYETAVLLDQHNSISEEIPYNDYFDYYSPDFKLHLTPN-GQENLNTKESLEHCRSVILENLQTLQGAPSVQMHE 403
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Match: Histone (deacetylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C095_SAPPC) HSP 1 Score: 486 bits (1252), Expect = 4.950e-169 Identity = 222/329 (67.48%), Postives = 267/329 (81.16%), Query Frame = 1
Query: 1 ELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVEV 987
E+ FH DY++FL+K+ P + Q KF+VGEFTDCPVF+G++ FCQ Y+G S+D A +LN ++D+CINW+GGLHHAKK+EASGFCYVNDIVL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT+SFHKYGDFFPGTGDIKDVGAK+GKYY+VN PL+ GIDD S+ SIFKPV+ KVME ++P AVVLQCGADSLTGDRLGCFNLT+KGH E V+ VKSFG+P LVLGGGGYTIRNV+R WAYET V+L +++ IP+N+YFEYYAP FKLHL P+P +EN N+ L+ +K + L+ L GAPS+QM V
Sbjct: 58 EVKAFHTTDYIDFLKKISPANEKQY----QSDVNKFNVGEFTDCPVFDGIFNFCQIYSGGSLDAAYRLNQGLSDVCINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDVGAKAGKYYAVNVPLKSGIDDESYLSIFKPVIEKVMESFRPGAVVLQCGADSLTGDRLGCFNLTVKGHGECVRFVKSFGLPTLVLGGGGYTIRNVSRAWAYETSVVLEEQVSNDIPFNEYFEYYAPSFKLHLDPNPELENCNSRTYLEDIKVKIFEHLRMLNGAPSVQMQAV 382
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8900.17087.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
|---|
| Histone | 5.440e-245 | 99.70 | deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... | [more] |
| Histone | 1.790e-175 | 72.12 | deacetylase n=1 Tax=Pelagomonas calceolata TaxID=3... | [more] |
| Histone | 8.330e-175 | 70.25 | deacetylase n=1 Tax=Spumella elongata TaxID=89044 ... | [more] |
| Histone | 2.350e-174 | 69.60 | deacetylase (Fragment) n=1 Tax=Fibrocapsa japonica... | [more] |
| Histone | 5.430e-173 | 70.21 | deacetylase n=1 Tax=Phaeomonas parva TaxID=124430 ... | [more] |
| Histone | 1.760e-171 | 69.14 | deacetylase n=2 Tax=Bicosoecida sp. CB-2014 TaxID=... | [more] |
| Histone | 2.340e-171 | 68.59 | deacetylase n=1 Tax=Dictyocha speculum TaxID=35687... | [more] |
| Histone | 2.280e-170 | 70.82 | deacetylase n=1 Tax=Chaetoceros debilis TaxID=1222... | [more] |
| Histone | 9.630e-170 | 66.96 | deacetylase n=1 Tax=Florenciella parvula TaxID=236... | [more] |
| Histone | 4.950e-169 | 67.48 | deacetylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 677.9 |
| Seed ortholog evalue | 2.4e-192 |
| Seed eggNOG ortholog | 2880.D8LGV7 |
| Preferred name | HDAC3 |
| KEGG ko | ko:K06067,ko:K11404,ko:K11483 |
| KEGG Pathway | ko04110,ko04213,ko04330,ko04919,ko05016,ko05034,ko05165,ko05169,ko05200,ko05202,ko05203,ko05220,map04110,map04213,map04330,map04919,map05016,map05034,map05165,map05169,map05200,map05202,map05203,map05220 |
| GOs | GO:0000003,GO:0000118,GO:0000122,GO:0000226,GO:0000228,GO:0000785,GO:0000790,GO:0000819,GO:0001525,GO:0001558,GO:0001568,GO:0001817,GO:0001818,GO:0001889,GO:0001932,GO:0001933,GO:0001934,GO:0001944,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005794,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007063,GO:0007154,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007406,GO:0007548,GO:0007623,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010941,GO:0010942,GO:0010948,GO:0012505,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016202,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0017136,GO:0019213,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030307,GO:0030332,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031490,GO:0031497,GO:0031507,GO:0031647,GO:0031667,GO:0031668,GO:0031960,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032204,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032388,GO:0032501,GO:0032502,GO:0032507,GO:0032652,GO:0032680,GO:0032692,GO:0032720,GO:0032870,GO:0032872,GO:0032873,GO:0032874,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033157,GO:0033365,GO:0033554,GO:0033558,GO:0033993,GO:0034399,GO:0034401,GO:0034405,GO:0034504,GO:0034613,GO:0034641,GO:0034728,GO:0034739,GO:0034967,GO:0034979,GO:0035239,GO:0035295,GO:0035601,GO:0036211,GO:0040008,GO:0040014,GO:0040020,GO:0040029,GO:0042127,GO:0042221,GO:0042262,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043433,GO:0043523,GO:0043525,GO:0043696,GO:0043697,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045129,GO:0045138,GO:0045185,GO:0045595,GO:0045596,GO:0045786,GO:0045814,GO:0045835,GO:0045843,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046328,GO:0046329,GO:0046483,GO:0046661,GO:0046822,GO:0046823,GO:0046824,GO:0046825,GO:0046826,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048634,GO:0048635,GO:0048638,GO:0048646,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048880,GO:0048881,GO:0048882,GO:0048915,GO:0048916,GO:0048925,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051059,GO:0051090,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051225,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051384,GO:0051445,GO:0051447,GO:0051457,GO:0051641,GO:0051651,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051879,GO:0051960,GO:0051961,GO:0051983,GO:0055024,GO:0055026,GO:0060255,GO:0060284,GO:0060303,GO:0060341,GO:0060548,GO:0061008,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070210,GO:0070302,GO:0070303,GO:0070304,GO:0070491,GO:0070727,GO:0070828,GO:0070868,GO:0070869,GO:0070887,GO:0070925,GO:0070932,GO:0070933,GO:0071103,GO:0071107,GO:0071214,GO:0071260,GO:0071310,GO:0071374,GO:0071495,GO:0071496,GO:0071498,GO:0071548,GO:0071704,GO:0071824,GO:0071840,GO:0071922,GO:0071944,GO:0072091,GO:0072358,GO:0072359,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090304,GO:0090316,GO:0090317,GO:0090598,GO:0097159,GO:0097327,GO:0097549,GO:0098732,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0104004,GO:0140096,GO:0140110,GO:1900180,GO:1900182,GO:1901214,GO:1901216,GO:1901360,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1901861,GO:1901862,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902692,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903827,GO:1903828,GO:1903829,GO:1904035,GO:1904037,GO:1904589,GO:1904591,GO:1904950,GO:1904951,GO:1905207,GO:1905208,GO:1905634,GO:1990679,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000178,GO:2000241,GO:2000242,GO:2000647,GO:2000674,GO:2000676,GO:2000725,GO:2000726,GO:2001141 |
| EggNOG free text desc. | NAD-dependent histone deacetylase activity (H3-K14 specific) |
| EggNOG OGs | COG0123@1,KOG1342@2759 |
| EC | 3.5.1.98 |
| COG Functional cat. | BQ |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03036 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Histone deacetylase |
| Ec32 ortholog | Ec-28_001400.1 |
| Exons | 9 |
| Model size | 1041 |
| Cds size | 1035 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930946.6242921-CDS-Ecto-sp9_F_contig8900:1629..1797 | 1622930946.6242921-CDS-Ecto-sp9_F_contig8900:1629..1797 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 1630..1797 - |
| 1692278961.7667866-CDS-Ecto-sp9_F_contig8900:1629..1797 | 1692278961.7667866-CDS-Ecto-sp9_F_contig8900:1629..1797 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 1630..1797 - |
| 1622930946.6494288-CDS-Ecto-sp9_F_contig8900:2381..2493 | 1622930946.6494288-CDS-Ecto-sp9_F_contig8900:2381..2493 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 2382..2493 - |
| 1692278961.779539-CDS-Ecto-sp9_F_contig8900:2381..2493 | 1692278961.779539-CDS-Ecto-sp9_F_contig8900:2381..2493 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 2382..2493 - |
| 1622930946.67326-CDS-Ecto-sp9_F_contig8900:3007..3195 | 1622930946.67326-CDS-Ecto-sp9_F_contig8900:3007..3195 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3008..3195 - |
| 1692278961.7921202-CDS-Ecto-sp9_F_contig8900:3007..3195 | 1692278961.7921202-CDS-Ecto-sp9_F_contig8900:3007..3195 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3008..3195 - |
| 1622930946.6959608-CDS-Ecto-sp9_F_contig8900:3598..3688 | 1622930946.6959608-CDS-Ecto-sp9_F_contig8900:3598..3688 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3599..3688 - |
| 1692278961.8012638-CDS-Ecto-sp9_F_contig8900:3598..3688 | 1692278961.8012638-CDS-Ecto-sp9_F_contig8900:3598..3688 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3599..3688 - |
| 1622930946.719917-CDS-Ecto-sp9_F_contig8900:3975..4074 | 1622930946.719917-CDS-Ecto-sp9_F_contig8900:3975..4074 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3976..4074 - |
| 1692278961.8102906-CDS-Ecto-sp9_F_contig8900:3975..4074 | 1692278961.8102906-CDS-Ecto-sp9_F_contig8900:3975..4074 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 3976..4074 - |
| 1622930946.7386858-CDS-Ecto-sp9_F_contig8900:4362..4482 | 1622930946.7386858-CDS-Ecto-sp9_F_contig8900:4362..4482 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 4363..4482 - |
| 1692278961.8186102-CDS-Ecto-sp9_F_contig8900:4362..4482 | 1692278961.8186102-CDS-Ecto-sp9_F_contig8900:4362..4482 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 4363..4482 - |
| 1622930946.7631726-CDS-Ecto-sp9_F_contig8900:4845..4944 | 1622930946.7631726-CDS-Ecto-sp9_F_contig8900:4845..4944 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 4846..4944 - |
| 1692278961.8283908-CDS-Ecto-sp9_F_contig8900:4845..4944 | 1692278961.8283908-CDS-Ecto-sp9_F_contig8900:4845..4944 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 4846..4944 - |
| 1622930946.7867956-CDS-Ecto-sp9_F_contig8900:5139..5214 | 1622930946.7867956-CDS-Ecto-sp9_F_contig8900:5139..5214 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 5140..5214 - |
| 1692278961.8387709-CDS-Ecto-sp9_F_contig8900:5139..5214 | 1692278961.8387709-CDS-Ecto-sp9_F_contig8900:5139..5214 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 5140..5214 - |
| 1622930946.8122509-CDS-Ecto-sp9_F_contig8900:5593..5677 | 1622930946.8122509-CDS-Ecto-sp9_F_contig8900:5593..5677 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 5594..5677 - |
| 1692278961.850111-CDS-Ecto-sp9_F_contig8900:5593..5677 | 1692278961.850111-CDS-Ecto-sp9_F_contig8900:5593..5677 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8900 5594..5677 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930946.831026-UTR-Ecto-sp9_F_contig8900:5677..5683 | 1622930946.831026-UTR-Ecto-sp9_F_contig8900:5677..5683 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8900 5678..5683 - |
| 1692278961.8613088-UTR-Ecto-sp9_F_contig8900:5677..5683 | 1692278961.8613088-UTR-Ecto-sp9_F_contig8900:5677..5683 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8900 5678..5683 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8900.17087.1 >prot_Ecto-sp9_F_contig8900.17087.1 ID=prot_Ecto-sp9_F_contig8900.17087.1|Name=mRNA_Ecto-sp9_F_contig8900.17087.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=345bp
MRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYR
FCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVL
AILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGT
GDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVV
LQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNV
ARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQ
ELDRLKTTVLRQLQTLQGAPSMQMVEVRERICAALYSLSERLLL* back to topmRNA from alignment at Ecto-sp9_F_contig8900:1630..5683- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig8900.17087.1 ID=mRNA_Ecto-sp9_F_contig8900.17087.1|Name=mRNA_Ecto-sp9_F_contig8900.17087.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4054bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8900:1630..5683- (Ectocarpus species9 EcSCA_722f female)
GAGCTGATGCGGTTTCACCAAGCGGACTACGTCAACTTCCTCGAGAAGGT
CATGCCCGGTCCCGCGCGCGGTCAGGGGACTGGCCCTCAGGTGAGCTGCG
CTTCTCGAGCGAGGCGTGCGACGTGGCGAGACACCTCTCGCCGGTGTACT
CGTGCTGAGCAGGGCTGTGGCGGACTACTGCGATTTGAATTCGTGCAATG
ACTGTAGTGGTTGAAGAAGAGGGGTTTGTGCGCGACGTTGCTTCTGTACA
TGTACATTGGCTGCAGCGTATGCGCAAGATCTTTATGTGCGGCAATTCCA
TCATGTCCAGGAGAAGCGTTGCTGTGCTTTCAGTAAAGAATTCCATACAA
GGGCGTAAACATGTTCTATGTTGCCCCCCCCTCCCTCTACTTGTACAAAC
AACTATTTTCCCCGCCCTCCCACCCTCCCTCCCCGTTCCATCTCCGGTGG
AAACCCGCTACGTGACGAGCAGCAGCAAACCAAGTTCAGCGTCGGCGAAT
TCACCGACTGCCCGGTGTTTGAGGGTCTCTACCGATTCTGCCAGGTGAGT
GAAGTATTAATAGACGTTTTTTTCTTTATGTCCAACCACTGTACGCGAAA
CATTTTTTCCAAACGTTGTCAGGAGTCCACGTCCAAAAACCGAACAAAGT
GGAATGGCGTCCGGGCGGCTGCTGTTGTTTAGAAACACCGCCCGTGGGTA
CCAACCTCTGTTTTTTTTTTTTCTTCTTCTTTTTTTCAGTCTTACACCGG
AGCGTCGATCGACGGCGCGATCAAGCTCAACCACGACATGGCGGACATCT
GCATCAACTGGTCGGGCGGGCTTCATCACGCCAAGAAGGTGAAAACGGGA
GGGAAACGAAAACGCGCCAGACAAGGCGCGTCTCTCGCTGCTGCTGTGCT
TCACATTCCACGTGTGCTGCCGTGCTTGCACGTCTTTTTACGTTGCCGCA
CACGGGTCTTTTTTTTTTTCATCTGTGTGCATACCTCCTCCTCTTTTGTG
CATGGTGCTTGTTTGGGCGTGCTTACCTCGCTGGGATTAGACGACGGTTT
TGGCAGAGAAGGGGGGAGTTATACCACCTGTCGCCGCGGGTGTACGGGAG
TCTGGGGCTCGAGCATGACGGCCGTTTGTAGCAGCAATATCGCCGATGAC
GTTCATACGCGTTCGTTCATGTGTGTGCGTGTGTGTGTGTGGTTTGCTCA
GGCGGAGGCATCGGGCTTCTGCTATGTGAATGACATCGTACTAGCCATCC
TCGAGCTTCTCAAGTACCACTCCCGCGTGCTGTACATCGACATCGACATA
CACCATGGCGACGGGGTGGAGGTGCGCTGTTGTTGCTGCTGTTGTTGTTG
AGATTTTTGTCGATGGTTAATTTTGTGGTTCGCTTCCCCATTCAGTGAGC
GATTTGGTTACGAACATACGCAGGTTGCATAGTACTCCAAACCAAGACTT
GTCTTCGGAGTTGCCTTGCGGATTTTTTCTCTCTTGTTCCTTCTCTGTAG
TGTTTTTTTTTCGTTTTTTTCTCCATGACAACAAAATATAGATTTATATA
TTTACATGCATCTGCGTGTTCATGTTTCCGTCCTTTTCTTGTTTTTGTTG
CTTTTCCAGGAAGCGTTCTACACGACGGATCGCGTGATGACCCTATCGTT
CCACAAGTACGGTGATTTCTTCCCCGGCACGGGTGACATCAAGGACGTCG
GGGCGAAGGTGATAGACCACTACACGGTCGCACATATATTTTTGGCATTT
TTCATTTTGGCGACGCCTGCATGCGAGTTCCTTGGGCCCTCTCCTGGTTT
TTCATGTACCCGAAGGTGTACCATTCGGTGTAGCGTGTGTGTTTTTTTTT
CTGGGCGAGCGAGGCGAGGTGTACGGACACTATTGTAGCAGAACACAATA
ATCGAAGCTATTGCGTGTGCCTCTACCCCGAGATGATAACCTTCTTGATC
TTTGATCGAAAATCACACTTGCCCTTGATGCCCTTGCTGCTGCAGTCCGG
CAAGTACTACTCGGTGAACTTCCCTCTGCAAGAAGGCATCGACGACAACA
GCTTTGAGAGCATCTTCAAGCCCGTCGTCAACAAGGTGAGGCCAACGCTC
GAGTCTTTCGCGCTTCCGGATTTCTTTTAATTATTAGAGAAGGGGGGGGG
GGGAGTAGTTCAGGCAGACACCACACTGGAGAGCGGGTGCTGCCTGAGTG
AAGAAAAACCGAACTTGGTAGCACTATCGCGCTTTCGCACGCACCATCAT
GGCCTCGTCTTTGTCCTACATATATACATGGCGGAGAACCTTCCGGAGAA
CCTTCCGGAGAACCTTCCTTTCGGGGTGATTGGTTCCTTTGCGGTTCGGC
GCCTGGTCTGTAGGGACCTGCTGTTTCCCGAATCAATCAATCTAATCAGA
CCCCATTCCCCCCCCCCTACCGAACCTTCCCGATCTATCGTGCCCCCCTC
TTCCTCCCTCTCCGCCACGACCTTTTTTTTGGCAATAGGTGATGGAGATG
TATCAACCGTCAGCGGTGGTGCTGCAGTGCGGGGCGGACTCCCTCACGGG
AGACCGGCTGGGCTGCTTCAACCTCACGCTCAAGGGACACGCGGAGGCTG
TCAAGCACGTCAAGAGCTTCGGCGTGCCAATGCTGGTGCTCGGGGGAGGG
GGCTACACCATCCGCAACGTGGCACGGTGGGGGCTGGGGTCGGGTCGGGT
GGTGGGATCCCGTGCGGTGCTGGTGCTGGTGCCGGTACCGGTGCCGTTGG
CGATACAGGATGAAGCACTAATAGTCCTGTATTGTTCGCACCACCTCTCA
TTGCTGTTGGTGCTATTGACTTTGGTGTGTCATAATGCTGTCGACCCTGA
TCGAGGCTTGTTTTAATGTGTTTTTGTGTTTTTGAGTTTTTTGGGGAGCG
TTCAGGATCGACACGTGTTCGGGTCTTGTCTTGGGGGGAAGTGTTCCAAG
GCCCGCCATCGTCTTGACGAAGGCGTGTTTCCTGCTGTTGCTGTAGAGGG
GTGTTTCGTTCTGTGTGTTTTCTGCGCCTACTCGTTTTGGTGGCGAGACT
GCAGGGTTTATTGGCCGAACTGGGGGTTCTGCTCTACTCATGTTAATCAG
ATCTTCCGCATGTTTCCTGGCGGACACGGACGGTATGTGCGTGTCTTACA
CTTGTGATTTTTTTTTACTTGTTGCTGCTATCCTACGCAGGTGCTGGGCC
TATGAGACGGGGGTGCTGCTGGGCAAGGAGATCGACGAGGCGATTCCGTA
CAACGACTACTTCGAGTACTACGCGCCGGACTTCAAGCTTCACCTAACTC
CGGTAAGGGTTTTGTTTCGTGGTTTCCATGTGTAGAATACGTTGCTGCTT
TCTGTCATTTTCGGCTATGTTGCTGTGTACAGTTGGCTTCAAGTTGGGGA
TGGGATTCCCTCGGGGCAAGCGATGATATTCCGTGGGAGTCGGCTCTTCC
AAGCGACCAAAGGGTTCGAACGGTTGTTCCCCCTTTCCACCGAAACTCCA
TGTGTTTGGGGGAAGGTTGTCTGGTGAGAGCAGACAAGACTGTCGGCTAC
AGAAAGTGTGTGTGTGTGTGTGTGGGGTTCTTGACGCCCAGCTAGTTGGG
GGGTCGGGCTTGACTTGCTCGGATCCCTCGACAATCGAGCCACGCTTTCA
TTACCCCCTCTTCGTGCTTGGCCCTAACTAAAAAGCGAATGCCAGTGACA
CCGGTAAAACAGGGGTCGCGCTAGACTCAGCCTTCAGGTCGCGTGATGTT
GGCATCGTGGGACGAACAAGAACGCATAGCTAACGACTGTGAATATTGTG
GTCTCATGTCTTCCCCCCACGCGTTCGTGTTGTCGTCGGGGGAACATCTC
TATGTTTCCTATTCCGACGGCGTGCCGTCGACGCAGTCTCCCCACATGGA
GAATCTCAACACACCGCAGGAGCTGGACCGGCTCAAGACCACCGTGCTGC
GGCAGCTCCAGACGCTGCAGGGGGCGCCGTCGATGCAGATGGTGGAGGTG
AGAGAGCGTATTTGTGCGGCTCTCTACTCTCTATCGGAACGGTTGCTATT
GTGA back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig8900:1630..5683- >mRNA_Ecto-sp9_F_contig8900.17087.1 ID=mRNA_Ecto-sp9_F_contig8900.17087.1|Name=mRNA_Ecto-sp9_F_contig8900.17087.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2070bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8900:1630..5683- (Ectocarpus species9 EcSCA_722f female)
ATGCGGTTTCACCAAGCGGACTACGTCAACTTCCTCGAGAAGGTCATGCC
CGGTCCCGCGCGCGGTCAGGGGACTGGCCCTCAGATGCGGTTTCACCAAG
CGGACTACGTCAACTTCCTCGAGAAGGTCATGCCCGGTCCCGCGCGCGGT
CAGGGGACTGGCCCTCAGCAGCAGCAAACCAAGTTCAGCGTCGGCGAATT
CACCGACTGCCCGGTGTTTGAGGGTCTCTACCGATTCTGCCAGCAGCAGC
AAACCAAGTTCAGCGTCGGCGAATTCACCGACTGCCCGGTGTTTGAGGGT
CTCTACCGATTCTGCCAGTCTTACACCGGAGCGTCGATCGACGGCGCGAT
CAAGCTCAACCACGACATGGCGGACATCTGCATCAACTGGTCGGGCGGGC
TTCATCACGCCAAGAAGTCTTACACCGGAGCGTCGATCGACGGCGCGATC
AAGCTCAACCACGACATGGCGGACATCTGCATCAACTGGTCGGGCGGGCT
TCATCACGCCAAGAAGGCGGAGGCATCGGGCTTCTGCTATGTGAATGACA
TCGTACTAGCCATCCTCGAGCTTCTCAAGTACCACTCCCGCGTGCTGTAC
ATCGACATCGACATACACCATGGCGACGGGGTGGAGGCGGAGGCATCGGG
CTTCTGCTATGTGAATGACATCGTACTAGCCATCCTCGAGCTTCTCAAGT
ACCACTCCCGCGTGCTGTACATCGACATCGACATACACCATGGCGACGGG
GTGGAGGAAGCGTTCTACACGACGGATCGCGTGATGACCCTATCGTTCCA
CAAGTACGGTGATTTCTTCCCCGGCACGGGTGACATCAAGGACGTCGGGG
CGAAGGAAGCGTTCTACACGACGGATCGCGTGATGACCCTATCGTTCCAC
AAGTACGGTGATTTCTTCCCCGGCACGGGTGACATCAAGGACGTCGGGGC
GAAGTCCGGCAAGTACTACTCGGTGAACTTCCCTCTGCAAGAAGGCATCG
ACGACAACAGCTTTGAGAGCATCTTCAAGCCCGTCGTCAACAAGTCCGGC
AAGTACTACTCGGTGAACTTCCCTCTGCAAGAAGGCATCGACGACAACAG
CTTTGAGAGCATCTTCAAGCCCGTCGTCAACAAGGTGATGGAGATGTATC
AACCGTCAGCGGTGGTGCTGCAGTGCGGGGCGGACTCCCTCACGGGAGAC
CGGCTGGGCTGCTTCAACCTCACGCTCAAGGGACACGCGGAGGCTGTCAA
GCACGTCAAGAGCTTCGGCGTGCCAATGCTGGTGCTCGGGGGAGGGGGCT
ACACCATCCGCAACGTGGCACGGTGATGGAGATGTATCAACCGTCAGCGG
TGGTGCTGCAGTGCGGGGCGGACTCCCTCACGGGAGACCGGCTGGGCTGC
TTCAACCTCACGCTCAAGGGACACGCGGAGGCTGTCAAGCACGTCAAGAG
CTTCGGCGTGCCAATGCTGGTGCTCGGGGGAGGGGGCTACACCATCCGCA
ACGTGGCACGGTGCTGGGCCTATGAGACGGGGGTGCTGCTGGGCAAGGAG
ATCGACGAGGCGATTCCGTACAACGACTACTTCGAGTACTACGCGCCGGA
CTTCAAGCTTCACCTAACTCCGGTGCTGGGCCTATGAGACGGGGGTGCTG
CTGGGCAAGGAGATCGACGAGGCGATTCCGTACAACGACTACTTCGAGTA
CTACGCGCCGGACTTCAAGCTTCACCTAACTCCGTCTCCCCACATGGAGA
ATCTCAACACACCGCAGGAGCTGGACCGGCTCAAGACCACCGTGCTGCGG
CAGCTCCAGACGCTGCAGGGGGCGCCGTCGATGCAGATGGTGGAGGTGAG
AGAGCGTATTTGTGCGGCTCTCTACTCTCTATCGGAACGGTTGCTATTGT
GATCTCCCCACATGGAGAATCTCAACACACCGCAGGAGCTGGACCGGCTC
AAGACCACCGTGCTGCGGCAGCTCCAGACGCTGCAGGGGGCGCCGTCGAT
GCAGATGGTGGAGGTGAGAGAGCGTATTTGTGCGGCTCTCTACTCTCTAT
CGGAACGGTTGCTATTGTGA back to top
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