mRNA_Ecto-sp9_F_contig8876.17051.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 1184 bits (3062), Expect = 0.000e+0 Identity = 650/715 (90.91%), Postives = 661/715 (92.45%), Query Frame = 1
Query: 1 QVARVKPLKDRDAAQLLMDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLQRAIQHRLEYQQETHTLRRNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQXXXXXXXXXXXXASPFFQERSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAXXXXXXXXXXXXXXXXRXHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASGVGXXXXXXXXXXXXYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXX---DVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEVRKGGWCYIEVEQGSKVQYPSLHDLVLACSSMQVLYPDVLKEEAFDEPSGGXXXXXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIEMVLVDDDLDADLALAGAV 2136
+VA+VKPLKDRDAAQLL++KVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVL RA QHRLEY+QETHTLRRNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQ XXXXXXXXX SPFFQ+ SSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHG HSA R HSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGG SDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDAS VG YGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQ ASRGYAGTELVSIGSSGAADAASGRXXXXXXXXX DVISL+AFVEFSLWWAPLM TLSLLRNDWAST+PTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR SSML SAPRSRPRSQSMCVKHCLVEVR+GGWCYIEVEQGSKV YPSLHDLVLACSSMQVLYPDV KE+AFDEPSGG XXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPI+MVLVDDDLDADL LAGAV
Sbjct: 308 RVAKVKPLKDRDAAQLLINKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLHRANQHRLEYKQETHTLRRNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQQQXXXXXXXXX-VSPFFQDLSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGIHSAAAPAAARASSHPHHHQRRHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGG--SDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASSVGVGVGNG------YGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPSGGGPWXXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV 1013
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 2.740e-187 Identity = 291/349 (83.38%), Postives = 302/349 (86.53%), Query Frame = 1
Query: 1090 MQHLCGKLTIPSSHDEVVDEGPYGWRGDASGVGXXXXXXXXXXXXYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXDVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEVRKGGWCYIEVEQGSKVQYPSLHDLVLACSSMQVLYPDVLKEEAFDEPSGGXXXXXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIEMVLVDDDLDADLALAGAV 2136
MQHLCG LTIPS+ +VVDEGPYGWRGDAS VG YGAVNTPQVRWMNEEELAFVRGVLK KQEKVRLKQEKLRQQLASRGY+GTELVSIGSSGAADAA GR +VISLEAFVEFSLWWAPLM TLSLLRNDWAST+PTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR SSMLASAP SRPRSQSMCVKHCLVEVR+GGWCYIEVEQGSKV YPSLHDLVLACSSM+VLYPDV KE+AFDEPSGG DAALSD+M LYPQP DV RLSGPVGVVTLEEWGSRP++MVLVDDDLDADL LAGAV
Sbjct: 1 MQHLCGNLTIPSNDTKVVDEGPYGWRGDAS-VGFGGRGGEGNG--YGAVNTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADAAFGRDGGNGNG--NVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMEVLYPDVRKEDAFDEPSGGGPWGGGGG---DAALSDSMPLYPQPSDVTRLSGPVGVVTLEEWGSRPLDMVLVDDDLDADLTLAGAV 341
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: CHAT (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 523 bits (1346), Expect = 7.550e-172 Identity = 297/347 (85.59%), Postives = 307/347 (88.47%), Query Frame = 1
Query: 1 QVARVKPLKDRDAAQLLMDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLQRAIQHRLEYQQETHTLRRNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQXXXXXXXXXXXXASPFFQERSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAXXXXXXXXXXXXXXXX-RXHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAG 1038
+VA+V+PL DRDAAQLL+DKVPT+FTKKELRLSLSHRCTREDILKALEAH VLKAAEGHPGTLLRLAPLLEDHNVNDACVL+R Q RLEY+ E TLRRNRA SNTSLASS GAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPH LGHA+SHDTHFQQ ASPFFQE SSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSA XXXXXX XXXXXX R HS+H QSPTHP QH PQRRMTV+NQLMAQVELEEPDPPQMTP EKRAWDTARTAGLMDRGCRLVWV ATTNALLNGWTYDGGG SDNGGFGWPA GAG G
Sbjct: 435 RVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVNDACVLERVTQCRLEYKLEPQTLRRNRASSNTSLASSVGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHFLGHAISHDTHFQQQHNGTGNGNG--ASPFFQEFSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAAXXXXXXRPSXXXXXXXRRHSAHLQSPTHPHQHRPQRRMTVVNQLMAQVELEEPDPPQMTPREKRAWDTARTAGLMDRGCRLVWVTATTNALLNGWTYDGGGG--SDNGGFGWPAGGAGGG 777
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 223 bits (569), Expect = 7.840e-58 Identity = 222/687 (32.31%), Postives = 296/687 (43.09%), Query Frame = 1
Query: 4 VARVKPLKDRDAAQLLMDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKA----AEGHPGTLLRLAPLLEDHNVNDACVLQRAIQHRL-----------------------------------------EYQQETHTLRR-NRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQXXXXXXXXXXXXASPFFQERSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAXXXXXXXXXXXXXXXXRXHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLC-GKLTIPSSHDEVVDEGPYGWRGDASGVGXXXXXXXXXXXXYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXDVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEVRKGGWCYIEVEQGSKVQYPSLHDLVLACSSMQVLYPDVLKEEAFDE 1923
VARV+PL+ R A++LLMD +P EL L S + D+L A++ HPVLK AEGHPGTL+RLAP+L D +++DAC L+ R+ +++ +++ RR R SN + SS G M+L +S G P +P +G A DTH Q+ +S AG P+ N G + HSS H PQ P H H Q+ L + +EP+ PQM EE+R D AR AG++DRGCRLVWV AT+ + G D XXX W + V W+ L+ LM+HL G T + D ++ P+G D TPQ L F+RG+L+ QE V A G G E + D IS+EAF +FS WWAPL++TL ++RNDWA T P RVHGF+SR+AA+R L++RE GTFLLRFSES+ G LV+SFT+ P P +S+ VKH LVEV+ GG C I+ E+G Y SLHD V ++ LYPD+ KEEAF E
Sbjct: 335 VARVEPLETRHASELLMDNLPRNLELTELGLE-SGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRVVVAARVMVWRLFEWLLLLGATKVAYNWDLATIGSLSEECRADFRDKSYRRRRYGRPNSNRTAVSSKGELSV--------------TMTLSSST--GAPRSPMILSPMGPAFG-DTHDQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETVREGPARAHSS-------------------SPPARCRNPEWHGP-PQPPPHSLLH--QQLQDHRRVLAQEAPDDEPESPQMDMEEQRTRDLARAAGVVDRGCRLVWVTATSR-MAGGCRQDDXXXXXXX-----WSSR--------RGKLVSWECLQESLMEHLREGTKTTRNWDDPIIS--PHGRVAD----------------------TPQ--------LEFIRGILRRGQEAVAR---------ARWGATGDECPEVDGG---------------CRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQ----------------PSVSPGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGE 895
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE) HSP 1 Score: 206 bits (524), Expect = 7.340e-55 Identity = 146/391 (37.34%), Postives = 193/391 (49.36%), Query Frame = 1
Query: 832 EPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLC-GKLTIPSSHDEVVDEGPYGWRGDASGVGXXXXXXXXXXXXYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXDVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQA----------------APRVSSMLASAP----------RSRPRSQSMCVKHCLVEVRKGGWCYIEVEQGSKVQYPSLHDLVLACSSMQVLYPDVLKEEAFDE 1923
EP+ QM +E+RAWD AR AG++DRGCRL+WV AT+ DGGG G GW + + V W+ L+ LM+HL G T + D ++ P+G V+TPQ L F+RG+L+ QE V A G G E +G G D +S+EAF FS WWAPLMATL ++RNDWA+T P RVHGF+SR+A++R L++RE GTFLLRFSES+ G LV+SFT+ A R++ L +P + R +S+ VKH LVEV+ GG C I+ E+G Y SLHD V ++ LYPD+ KEEAF E
Sbjct: 120 EPESSQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMARGCRQDDGGGS------GGGWSSR--------RGEIVSWECLQESLMEHLREGTKTTRNWDDPIIL--PHGR----------------------VVDTPQ--------LEFIRGILRRGQEAVAK---------ARWGATGDECTEVGGDG---------------RDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYGSLHDFVRQIPELKKLYPDIPKEEAFGE 440
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.080e-46 Identity = 221/713 (31.00%), Postives = 314/713 (44.04%), Query Frame = 1
Query: 1 QVARVKPLKDRDAAQLLMDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKA----AEGHPGTLLRLAPLLEDHNVNDACVLQR-AIQHRLEYQQETHTLR-RNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSM-------GGGRPMTPTQPHLLGHAMSHDTHFQQXXXXXXXXXXXXA-----------------SPFFQERSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAXXXXXXXXXXXXXXXXRXHSSHPQSPT--------------HPRQHHPQRRMTVMN--QLMAQVELEE-PDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSS------HDEV-------VDEGPYGWRGDASGVGXXXXXXXXXXXXYGAVNTPQ-------------VRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXDVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEVRKGGWCYIEV-EQGSKVQYPSLHDLVLACSSMQVLYPDVLKEEAF 1917
+VA V+PL+ R A++LL+D P +EL L S ++ ++ A + HPVLK A GHPGTL+RLAP+L + ++DAC L+ A R +++ +++ R R+GS TS SS+ A +A + SLG S G P TP+Q +G+A S D + + P+ E GGG + P +G+G G R H Q P+ H + R+ +M+ Q+MA+ LEE P+ PQM E++ AWD A AG+ +RGCRL+WV AT+N + N W DNG A G + V W++LR GL ++L ++T+P S HD + +D+G D+ V XXXXXXXXXXXX A + R ++ + F+RG+L+ KQ+ +LA+ G + G D IS+E F +FS WW PLM TL ++RNDWA T P VHGFI R+ + L R RG FLLRFSES PG+LV+S H H LVEV +GG CY+ V +QG++ +Y SLHDLV ++ LY D+ E+ F
Sbjct: 453 RVAEVEPLETRHASELLIDNSPRDLQPEELGLQ-SGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRRSGSGTSAGSSSSLAM-------IAREMSEAGSSLGTSAPTSRSQCGSPAPATPSQRPAMGNAFSEDAGHGRDRKRVSLNRTNSSIDGSXXXXXXXXXXXXXPPYPDEED---GGGGL--PRAHGSGPTG------------------------------RCRNPRCHGRPQQQPSLGQQSGSPPGCCLRHQFAQELRDRVAMMHRRQMMAREALEEQPELPQMNMEQQHAWDMAEAAGV-ERGCRLLWVTATSN-MANDWR--------RDNGXXXXXXXXASKRG----EFVSWNHLREGLQRNLDVRMTVPCSSSGGDRHDALEGTQYTYLDDGQ---EVDSEEVXXXXXXXXXXXXXERAAGGERRTGNRRMGPLPHATRVLDRSQWGFIRGILRKKQK-----------ELANAGVQTVDCTEYRLDG---------------RYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENL-RRARGAFLLRFSESHPGKLVISRAYH----------------------------HSLVEVTEGGRCYMTVNQQGTRREYESLHDLVTQNGQLRHLYQDIPMEQVF 1050
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: SH2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.210e-37 Identity = 208/701 (29.67%), Postives = 287/701 (40.94%), Query Frame = 1
Query: 4 VARVKPLKDRDAAQLLMDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKA----AEGHPGTLLRLAPLLEDHNVNDACVLQR-AIQHRLEYQQETHTLR-RNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSM-------GGGRPMTPTQPHLLGHAMSHDTHFQQXXXXXXXXXXXXASPFFQERSSWAGGGEMHHPLLNGAGMA----------------GGSSIHSSGIGGSGHGTHSAXXXXXXXXXXXXXXXXRXHSSHPQSPTHPRQHHPQRRMTVMN--QLMAQVELEE-PDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGXXXSDNGGFGWPAEGAGAGGVTNY-DCVPWDYLRRGLMQHLCGKLTIPSS------HDEV--------------------VDEGPYGWRGD---ASGVGXXXXXXXXXXXXYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQLASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXDVISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEVRKGGWCYIEVEQ-GSKVQYPSLHDLVLACSSMQVLYPDVLKEEAF 1917
VA VKPLK + A++LLMD P +EL L S ++ D++ A+E HPVLK A GHPGTL+RLAP+L ++NDA L+ A + R ++ +++ R R+GS TS SS VA + SLG S G P TP+Q +G+A S D ++ + SS G G G G HS +G +H + QS H Q + M+ Q++A+ LEE P+ PQM E + AWD A A + +RG RLVW AT+ + + G GG GW G GG + VP YL L HL ++T+P S HD + D+ D A+G G + R ++E +L F+R +L R Q+ + + ++ EL + D IS+ F FS WW PLM TL +RNDWA P RVHGFI R A+ LL + FLLRFSE PG+LVVS C H LVEV +GG C++EV++ G++ +Y SLHDLV S ++ LYPD+ KE+ F
Sbjct: 433 VATVKPLKMQHASELLMDNSPRDLQPEELGLQ-SGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFRDKSYRQRGHRRSGSCTSAGSSN-----------VARELSEAGSSLGTSAPTSRSPHGSPAPATPSQRPAMGNAFSEDAGHRRDRRCVSLN---------RTNSSIDGSGXXXXXXXXXWGTRPXXXXXXXXXEEDGGEGRPRPHSGNVG-----SHGSLERHDWL----------------QSCVHQLSLERQDEVNGMHRRQMLAREALEEQPELPQMNTEMQHAWDMAEAARV-ERGSRLVWANATSYMVDDRRRNKG-------CGGGGW-----GVGGRLKLGEAVPLKYLLESLRWHLDVRMTVPCSSSSGGRHDPLEGTHYTYLDDGEEVDFEEVEADDXXXXXXXDQERAAGEGRRTGNRRMRPMRHAT------RVLDERQLGFIRSIL-------RKNQKLAKAEANTQDSTACELDGL--------------------EDPISVGTFSRFSQWWTPLMVTLGNIRNDWARIWPIRVHGFIGRHEAQA-LLRMKPTAFLLRFSERHPGKLVVS---------------------------RACHHHSLVEVTEGGQCFMEVDKRGTRRKYESLHDLVTQNSLLRQLYPDIPKEQVF 1017
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5D4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.760e-7 Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 1459 ISLEAFVEFSLWWAPLMATLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRVSSMLASAPRSRPRSQSMCVKHCLVEV 1785
+S V WW P+++ ++LL W ++HG + R A++ LL R+ GTFL RFS SQP LV+S E + A P V+ A V+H LVEV
Sbjct: 68 VSRSMLVALKKWWTPVLSIVTLLPGPWQQW---QIHGMLDRATADQLLLNRQPGTFLFRFSGSQPQFLVISVLERHS-AVPEVTVQGAGT-----------VQHVLVEV 161 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8876.17051.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8876.17051.1 >prot_Ecto-sp9_F_contig8876.17051.1 ID=prot_Ecto-sp9_F_contig8876.17051.1|Name=mRNA_Ecto-sp9_F_contig8876.17051.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=696bp MDKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAback to top mRNA from alignment at Ecto-sp9_F_contig8876:774..5438- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig8876.17051.1 ID=mRNA_Ecto-sp9_F_contig8876.17051.1|Name=mRNA_Ecto-sp9_F_contig8876.17051.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4665bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8876:774..5438- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8876:774..5438- >mRNA_Ecto-sp9_F_contig8876.17051.1 ID=mRNA_Ecto-sp9_F_contig8876.17051.1|Name=mRNA_Ecto-sp9_F_contig8876.17051.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4176bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8876:774..5438- (Ectocarpus species9 EcSCA_722f female)back to top |