mRNA_Ecto-sp9_F_contig886.17041.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE7_ECTSI) HSP 1 Score: 1333 bits (3450), Expect = 0.000e+0 Identity = 809/934 (86.62%), Postives = 809/934 (86.62%), Query Frame = 2
Query: 23 MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGAGGGEAAEHTRTSPTRPSAQHQLGATXXXXXXXXXXXXXXXXPTPRSPRGRGRSPAGINPAISYRQQRRWIGSGNGSXXXXXXXXXXXXXXXXXXXXXXXXXXKSREEQTQFLPKEPRPIRFRLCRPGSASVQVIPPLKSLERVYACRGCGAFLLTGGHIIKPNIDLPSLQAVLARSSPRNQADQYAPDAGASPLSLVTSNSTATITSSMXXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAVATXXXXXXXXXXXXXXXXXXXXXXXXXLRVITTELGPDRPPMHNRWVPEGFLAGVQATTAGAGPPLQGATVTVGXXXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSGAAXXXXXXXXCAGDSRCGDCQRNSPVFAFESEDDSSNVDPFEREGEGMLAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRAAGTPTNATLQSGEFNFMLSSKVPLSAGSGMESVSPLMTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPSIPDTESQNERPTSRPGGGWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKTTSYMRSQLDSSRSSLSRDNTPKSSPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG 2824
MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGA GGEAAEHTRTSPTRPSAQHQLGAT XXXX PTPRSPRGRGRSPAGINP PNIDLPSLQAVLARSSPRNQADQYAPDAGASPLSLVTSNSTATITSSMXXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAVATXXXXXXXXXXXXXXXXXXXXXXXXXLRVITTELGPDRPPMHNRWVPEGFLAGVQATTAGAGPPLQGATVTVGXXXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSG A XXXXXXCAGDSRCGD QRNSPVFAFESEDDSSNVDPFEREGEG LAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRA GTPTNATLQSGEFN MLSSKVPLSAGSGMESVSPLMTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPS PDTESQNERPTSRPGG WLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIK TSYMRSQLDSSRSSLSRDNTPKSSPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG
Sbjct: 1 MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGAAGGEAAEHTRTSPTRPSAQHQLGATGAAXXXXSVSTAGIP-PTPRSPRGRGRSPAGINP------------------------------------------------------------------------------------------------------PNIDLPSLQAVLARSSPRNQADQYAPDAGASPLSLVTSNSTATITSSMXXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAVATXXXXXXXXXXXXXXXXXXXXXXXXXLRVITTELGPDRPPMHNRWVPEGFLAGVQATTAGAGPPLQGATVTVGXXXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSGTATGXXXXXXCAGDSRCGDGQRNSPVFAFESEDDSSNVDPFEREGEGTLAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRATGTPTNATLQSGEFNLMLSSKVPLSAGSGMESVSPLMTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPSFPDTESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKNTSYMRSQLDSSRSSLSRDNTPKSSPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG 831
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Protein-tyrosine (phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF0_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.290e-61 Identity = 107/162 (66.05%), Postives = 131/162 (80.86%), Query Frame = 2
Query: 68 QDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDR 553
QDN+PAKV DR++IGSIHAAFNQD + RGITHVLNASGLPATFPR FTYF VD+RDKE ++IL A+GA ++F+EAG EKGGVLVHCAGGRSRSAAF+ A++M Q ++D A Q++ ARPV ++NRGFE QLRAY A DVF +HQ+MLR R + +R
Sbjct: 1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTER 162
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: MAP (kinase phosphatase with leucine-rich repeats protein 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L3_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.500e-56 Identity = 99/161 (61.49%), Postives = 125/161 (77.64%), Query Frame = 2
Query: 50 LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIR 532
L LVQDN PA+V ++IGSIHAAFNQD + RGITHVLNASGLPATFPR FTYF VDIRD+E + IL A+GA +F++AG+EKGGVLVHCAGGRSRSAA + ++M+ ++D A +R RPV ++N+GFEQQLRA+ A + D+F ++QMMLR R
Sbjct: 9 LKSELVQDNAPARVVANVYIGSIHAAFNQDGLAQRGITHVLNASGLPATFPRAFTYFNVDIRDREDAAILGALGATAVFIDAGVEKGGVLVHCAGGRSRSAAIIAGYLMAKHAYTFDRALEALRVVRPVVAINKGFEQQLRAFEATRFDLFKSNQMMLRAR 169
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Aste57867_21739 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIB3_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.990e-48 Identity = 97/177 (54.80%), Postives = 130/177 (73.45%), Query Frame = 2
Query: 38 NPPP---LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRN 559
N PP L SLVQDN+P +V +LWIGSIH+AFN +++++R I+HVLN SG AT+P++FTY TVD+RDKE +NIL+ + +F+E G+++GGVLVHCAGGRSRS A +A IMST G SYD A +VR ARPV S+N GFE QLR + A+ D++ AHQM+L+ + RR+
Sbjct: 8 NKPPSLALQPSLVQDNIPCEVIPKLWIGSIHSAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDLRDKEYTNILSCVPITTVFLETGMQQGGVLVHCAGGRSRSPAIAIAHIMSTLGLSYDDALTKVRTARPVVSLNTGFEDQLRCFEKAKRDIYGAHQMLLQTKLVRARMRRS 184
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0P6_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.650e-48 Identity = 96/179 (53.63%), Postives = 135/179 (75.42%), Query Frame = 2
Query: 29 KRANPP--PLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRN 559
+R+ PP L SLVQDN+P +V +LW+GS+HAAFN +++++R I+HVLN SG AT+P++FTY TVDIRDK+ +N+L+ + +F+E+G++ GGVLVHCAGGRSRS A VVA++MST G S+D A +VR ARPVAS+N GFE QLR + A+ DV+ AHQ++L+ + RR+
Sbjct: 19 QRSKPPCLALQPSLVQDNLPCEVVPKLWVGSVHAAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDIRDKDYTNLLSCVPIATVFLESGMQHGGVLVHCAGGRSRSPAIVVAYLMSTLGTSFDEALIKVRTARPVASLNSGFEDQLRCFEKAKRDVYVAHQLLLQTKIVRARLRRS 197
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNR0_9STRA) HSP 1 Score: 189 bits (481), Expect = 4.500e-48 Identity = 101/186 (54.30%), Postives = 133/186 (71.51%), Query Frame = 2
Query: 23 MTKR--ANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMML--RIRAAALLDRRNLLL 568
M KR A PP L SLVQDNVP +V +LWIGSIHAAFN +++ +R I+HVLN S AT+P+ FTY TVDIRDK+ +N+L+ I ++F+EAGI +GG+LVHCAGGRSRS A V+A++M T G SY+ A +VR ARPV ++N GFE QLR A+ D++ AHQ +L +I A + +NL L
Sbjct: 8 MEKRTKAAPPSLQSSLVQDNVPCEVIPKLWIGSIHAAFNLEALHERKISHVLNVSSTVATYPQAFTYLTVDIRDKDYTNLLSCIPITSVFIEAGINQGGILVHCAGGRSRSPAIVMAYLMLTMGLSYEDALTKVRTARPVVALNSGFEDQLRCMEKAKRDIYLAHQWLLQGKIVRARMRRSQNLAL 193
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRS5_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.480e-47 Identity = 96/173 (55.49%), Postives = 130/173 (75.14%), Query Frame = 2
Query: 50 LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 568
L SLVQDN+P++V +LW+GSIHAAFN +++++R ITHVLN SG AT+P+ FTY +D+RDKE +NIL+ I +F+EAG++ GGVLVHCAGGRSRS A +A+IMST G SYD A A++R RPV S+N GFE+QL+ + A+ DVF AHQM+L+ + +RR+ L
Sbjct: 395 LQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKIVRARNRRSQCL 567
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UED3_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.500e-47 Identity = 95/180 (52.78%), Postives = 134/180 (74.44%), Query Frame = 2
Query: 38 NPPP---LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 568
N PP L SLVQDN+P +V +LW+GS+HAAFN +++++R ITHVLN SG AT+P +FTY TVD+RDK+ +N+L+ I +F+E+G+++GG+LVHCAGGRSRS A V+A++MS G S+D A ++VR ARPV +N GFE QLR + A+ DV+AAHQ++L+ + RR+ LL
Sbjct: 22 NKPPCLALQPSLVQDNLPCEVIPKLWVGSVHAAFNFEAIKERKITHVLNVSGTIATYPHEFTYLTVDLRDKDYTNLLSCIPIATVFLESGMQQGGILVHCAGGRSRSPAIVIAYLMSALGHSFDDAISKVRIARPVVQLNSGFEDQLRCFEKAKRDVYAAHQLLLQTKIVRARLRRSQLL 201
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Secreted (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CLY8_9STRA) HSP 1 Score: 195 bits (495), Expect = 9.120e-47 Identity = 96/173 (55.49%), Postives = 130/173 (75.14%), Query Frame = 2
Query: 50 LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 568
L SLVQDN+P++V +LW+GSIHAAFN +++++R ITHVLN SG AT+P+ FTY +D+RDKE +NIL+ I +F+EAG++ GGVLVHCAGGRSRS A +A+IMST G SYD A A++R RPV S+N GFE+QL+ + A+ DVF AHQM+L+ + +RR+ L
Sbjct: 436 LQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKIVRARNRRSQCL 608
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV7_SAPPC) HSP 1 Score: 183 bits (465), Expect = 8.470e-46 Identity = 89/169 (52.66%), Postives = 124/169 (73.37%), Query Frame = 2
Query: 50 LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRR 556
L +LVQDN+P++V +LW+GSIHAAFN +++++R ITHVLN SG AT+P+ FTY T+D+RDKE +N+L+ + +F+EAG++ GGVLVHCAGGRSRS A +A+IM TQG Y A+A++R R V ++N GFE QL+ AQ DVF AHQ++L+ + RR
Sbjct: 11 LQPALVQDNIPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLTIDLRDKEYTNLLSCLPITTVFLEAGMQNGGVLVHCAGGRSRSPAIAMAYIMLTQGFPYAEAFAKLRSVRSVVALNTGFEDQLQCLEKAQLDVFKAHQLLLQTKMVRARARR 179 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig886.17041.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig886.17041.1 >prot_Ecto-sp9_F_contig886.17041.1 ID=prot_Ecto-sp9_F_contig886.17041.1|Name=mRNA_Ecto-sp9_F_contig886.17041.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=935bp MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLback to top mRNA from alignment at Ecto-sp9_F_contig886:4122..11272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig886.17041.1 ID=mRNA_Ecto-sp9_F_contig886.17041.1|Name=mRNA_Ecto-sp9_F_contig886.17041.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7151bp|location=Sequence derived from alignment at Ecto-sp9_F_contig886:4122..11272- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig886:4122..11272- >mRNA_Ecto-sp9_F_contig886.17041.1 ID=mRNA_Ecto-sp9_F_contig886.17041.1|Name=mRNA_Ecto-sp9_F_contig886.17041.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5610bp|location=Sequence derived from alignment at Ecto-sp9_F_contig886:4122..11272- (Ectocarpus species9 EcSCA_722f female)back to top |