mRNA_Ecto-sp9_F_contig8834.17014.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8834.17014.1
Unique NamemRNA_Ecto-sp9_F_contig8834.17014.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 4.760e-171
Identity = 302/333 (90.69%), Postives = 303/333 (90.99%), Query Frame = 1
Query:    1 TPEAGEEGGFRGGTMEAETTRTSFAGTSGFMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDSPPPLTAEPLGRRPAKDPTEKSFAPRFSGAVAGAAANEAASVVDDPDDVSRFGAYLEPISGSAEEHAEXXXXXXXXXXXXGDNFEARRE-AERSVVEGA 996
            TPEAGEEGG RG TMEAETTRTSFAGTSGFMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEG            GVIPRSADVATADLLKALLA DPA RPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLV+TDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCD PPP TAEPLGRRPAKDPTEKSFAPRFSGAVAGAAAN AASVVDDPDD SRFGAYLEPISGSAEEHAEXXXXXXXXXXXX          AERSVVEGA
Sbjct: 1355 TPEAGEEGGVRGSTMEAETTRTSFAGTSGFMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGSGG-------GVGVIPRSADVATADLLKALLAADPARRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVQTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDPPPPPTAEPLGRRPAKDPTEKSFAPRFSGAVAGAAANGAASVVDDPDDASRFGAYLEPISGSAEEHAEXXXXXXXXXXXXXXXXXXXXXXAERSVVEGA 1680          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Outermembrane (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 5.940e-156
Identity = 304/374 (81.28%), Postives = 307/374 (82.09%), Query Frame = 1
Query:    1 TPEAGEEGGFRGGTMEAETTRTSFAGTSGFMAPE------------------VESGRPSSLASD--------------MYSLGAV------LFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDSPPPLTAEPLGRRPAKDPTEKSFAPRFSGAVAGAAANEAASVVDDPDDVSRFGAYLEPISGSAEEHAEXXXXXXXXXXXXGDNFEARREAERSVVEGAAASG 1008
            TPEAGEEGGFRGGTMEAETTRTSFAGTSGFMAPE                  V  G P   AS               + SLG V      L H   P  P    PVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLA DPA RPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSV+RLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDSPPP TAEPLGRRPAKDPTEKSFAPRFSGAVAGAAAN AASVVDDPDDVSRFGAYLEPISGS EEH E XXXXXXXXX   D+FEARREAERSVVEGAAASG
Sbjct: 1189 TPEAGEEGGFRGGTMEAETTRTSFAGTSGFMAPEAVREGRGARSPDPYLVTGVRHGAPHVSASTGRGSWLGGGIRKALLASLGHVQPGSRALPHAFSPTIPPARFPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAADPARRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVIRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDSPPPPTAEPLGRRPAKDPTEKSFAPRFSGAVAGAAANGAASVVDDPDDVSRFGAYLEPISGSVEEHVEEXXXXXXXXX---DSFEARREAERSVVEGAAASG 1559          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG59_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.110e-40
Identity = 96/191 (50.26%), Postives = 121/191 (63.35%), Query Frame = 1
Query:   91 MAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMR-LVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFE 660
            MAPEVE+G  ++ ASDMYSLG +LF +HFPDHPTGP+  A            ++G    +A  A  DLL  LL V PA RP ASDAL   YF+VS V RL +DGA+ EQ  KL A+R LF  VR+ ++ + P +W ++R +  LV  V+  L   DAA  ALR  ++I F GEAGVDEGG+LSE  TL FE
Sbjct:    1 MAPEVEAGGAATRASDMYSLGCLLFWLHFPDHPTGPVAGAP---------IRASGEAAAAASAALMDLLHQLLQVRPASRPSASDALLHAYFQVSFVDRLLEDGAVPEQHAKLAAMRALFARVREASRRAPPTRWMLRRGATTLVSDVLAALAALDAA--ALRAPVRIAFAGEAGVDEGGMLSEALTLFFE 180          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLZ2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.120e-20
Identity = 91/253 (35.97%), Postives = 117/253 (46.25%), Query Frame = 1
Query:    7 EAGEEGGFRGGTMEAETTRTSFAGTSGFMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVR-------------------DEAKPSGPLKWTVKRDSRYLVPSVM-----RLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFE 693
            +A EE G    T EAE   T  AG+  F          S  A+DM+S G ++   HF + P   LPVA                +P S D     LL+ LLA DP  RP AS+A+   YF  S+  RL   G LL Q  KLEAVR L R VR                   D  +P  P + + ++    LV  V+     R    + AG A R  LK+ FQGE G+DEGG+ +EM+ L FE ++ P  GLFE
Sbjct: 1086 QAPEEHGLLPQTPEAELPSTDAAGSENF----------SPYAADMFSFGVLV---HFMNLPQVELPVAGCLS------------LPTSLDPNLRSLLQQLLASDPDQRPTASEAMLHPYFTASYSDRLIASGDLLRQNEKLEAVRSLIRQVRRDHSNRVERLTVQRRGLDLDTPRPDRPRRNSRQQADARLVWQVLEHFARRGGNAEQAGGA-RSHLKVEFQGEVGLDEGGLTAEMFRLFFEGLVSPEVGLFE 1312          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMR1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.770e-16
Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   88 FMAPEVESGRPS-SLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKP-SGPLKWTVKRDS-------RYLVPSVMR----LVRTDAAGSA-----LRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFEN 696
            F+APE+ SG  + + ASDMYS GA L  +H         P        XXXXXX         D     LL  L A DP  RP A+DA+   YF+ S++ R    G L+ Q  KLEAVR L R VR E +      +  +KR++        +   +V R     +R   + ++      RR LK+TF GEAG+DEGG+ +EM+ L F  ++    GLFE+
Sbjct: 1175 FVAPEILSGESAPTTASDMYSFGATLRWLH------REAPGVRDEPKEXXXXXXXXXXXGSQPDEDMKHLLSVLTATDPDLRPSAADAILHPYFQNSYMDRFIAGGDLIGQNEKLEAVRDLLRRVRSEMRGLPNRREIVIKRENVVDDVLNHFSESNVRRHTFEQIRKGGSNASSSDHITRRPLKVTFDGEAGIDEGGLTAEMFALFFRGVLNDEGGLFES 1389          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKZ0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.720e-13
Identity = 71/216 (32.87%), Postives = 94/216 (43.52%), Query Frame = 1
Query:   88 FMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVR--------DEAKPSGP-----LKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFEN 696
            F+APEV  G  +S A+D+Y+ GAVL  +            A G          +    P + +     L+  LL  DP  RP A+D     YF  S+V R    G ++    KL AVR L   VR        D A   GP     +     RD+              A     RR L++TF+GEAGVDEGG+  EM+ L FE  + P  GLFE+
Sbjct:   97 FVAPEVAGGGGASAAADVYAFGAVLRWLW--------RATAAGGGATGGARTGA----PAAGEDELRTLVARLLVADPRARPSAADVALHPYFTDSYVDRYVAGGDIVGVNAKLAAVRDLLAAVRSASRRARADLAVARGPGLADRVLAFFGRDAVAARXXXXXXXXGAAGVPPARRPLRVTFEGEAGVDEGGLAREMFALFFEGALAPAAGLFED 300          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPV0_DICPU)

HSP 1 Score: 74.3 bits (181), Expect = 8.450e-11
Identity = 57/196 (29.08%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   76 GTSGFMAPEV-ESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGP-LKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLF 657
            GT  + APE+ E G   + ++D+++ G +L+  HFP     P+ + E             G      D   + LL ++L  +P  RP A       YF  S V  L     L++   K+ A R    ++ + A+  G  ++ T++RD   +V  + +        + L   L+++FQGE G+D GG+LSEMY+LLF
Sbjct: 1203 GTELYKAPEMKEQGVKGNYSTDIWAFGVMLYKTHFP-RAREPILLPEEEAVPMPSLIYHGGEQQHQVDQRLSSLLSSILQRNPQLRPSAHQVAVHPYFVTSLVEDLLSSRTLIDSREKIAAFRAHVSSLSEMAEEMGESIQLTLRRDK--IVSELFQFFHKKIEQNKLFSRLEVSFQGEKGLDHGGLLSEMYSLLF 1395          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: CAMK/CAMKL (protein kinase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2J6_THETB)

HSP 1 Score: 73.2 bits (178), Expect = 2.100e-10
Identity = 65/202 (32.18%), Postives = 96/202 (47.52%), Query Frame = 1
Query:   88 FMAPEVESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLFEAMMLPRFGLFE 693
            ++ PEVESGR     SD+YS+G +L+        TG LP                       DV    LL  +L  DP  R    +AL  ++F  S    L  D  +LE  +K+  +R     +R + K +  ++ T+ R+   +V SV+R   +  A S +   LK+ F+GEAGVD GG+  +MYT  F  +  PR+ LFE
Sbjct: 1916 YVGPEVESGRVVP-GSDVYSVGIMLYQAV-----TGRLPSMAQVLHGATGDDVK--------DVKLKSLLNGMLQPDPDKRVGVFEALTHEFFSHSVADTLFADRKILESEQKINLLRKHLEALRAQNKRNF-VRLTISRED--IVVSVVRAF-SSLAPSEMLCPLKVHFEGEAGVDAGGLTGDMYTEFFMHVFEPRYALFE 2099          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: hypothetical (protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A0E6)

HSP 1 Score: 61.6 bits (148), Expect = 1.130e-6
Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   64 TSFAG-TSGFMAPEV-ESGRPSSLASDMYSLGAVLFHMHFPDHPTGPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGP-LKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLF 657
            T FAG T  ++APE+ ES    S  +D+++ G +L+  HFP      L   E            +  IP+  D     LL ++L  +P+ RP A       YF  S V  L     L++   K+ A R    ++   ++ +   L  +VKR S  L+  V +  +       L   L++ FQGE G+D GG+ SEMY+L F
Sbjct: 1102 TLFAGGTEMYLAPEMKESKSTGSYTTDIWAFGVMLYKAHFPRARDPFLMPGE-----------MSVAIPQHPDQRLTALLGSILQRNPSQRPNAHQIAVHPYFVTSLVEDLLSSRTLIDSREKIAAFRAHISSLTMLSEETNESLVMSVKRSS--LIVDVFQFFKK-MESIKLFSHLEVDFQGEKGLDHGGLSSEMYSLFF 1288          
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Match: Uncharacterized (protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9B5_POLPP)

HSP 1 Score: 58.5 bits (140), Expect = 1.110e-5
Identity = 58/208 (27.88%), Postives = 91/208 (43.75%), Query Frame = 1
Query:   55 TTRTSFAG-TSGFMAPEV-ESGRPSSLASDMYSLGAVLFHMHFPDHPT-----GPLPVAEGXXXXXXXXXXSAGVIPRSADVATADLLKALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLFRTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQGEAGVDEGGILSEMYTLLF 657
            T  T F G T  ++APE+ ES    + ++D+++ G +LF  HFP         G L +A                IP+  D     LL ++L  +P  RP A       YF  S V  L     L++   K+ A R    ++   ++ +        R S  +V       + ++  + L   L++ FQGE G+D GG+ SEMY+L F
Sbjct: 1118 TNATMFTGGTEMYLAPEMRESQVTGTYSTDIWAFGVMLFKAHFPRSRDPFLLPGELNIA----------------IPQHPDQRLVALLSSVLQRNPQLRPTAHQIAVHPYFVTSLVEDLLSSRTLIDSREKIAAFRAHISSLAALSEETNQTLVMQVRRSTLIVDVFQFFKKMES--NKLFSLLEVDFQGEKGLDHGGLSSEMYSLFF 1307          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8834.17014.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
Uncharacterized4.760e-17190.69protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Outermembrane5.940e-15681.28protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.110e-4050.26protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.120e-2035.97protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical6.770e-1636.20protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical1.720e-1332.87protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized8.450e-1129.08protein n=1 Tax=Dictyostelium purpureum TaxID=5786... [more]
CAMK/CAMKL2.100e-1032.18protein kinase n=1 Tax=Thecamonas trahens ATCC 500... [more]
hypothetical1.130e-630.35protein n=1 Tax=Acytostelium subglobosum LB1 TaxID... [more]
Uncharacterized1.110e-527.88protein n=1 Tax=Polysphondylium pallidum (strain A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8834contigEcto-sp9_F_contig8834:1440..5586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.3
Seed ortholog evalue5.7e-138
Seed eggNOG ortholog2880.D8LAX6
KEGG koko:K10592
KEGG Pathwayko04120,map04120
GOsGO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016032,GO:0016567,GO:0016740,GO:0019058,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0023052,GO:0030163,GO:0030260,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046718,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051603,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0939@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons5
Model size1020
Cds size1017
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8834.17014.1prot_Ecto-sp9_F_contig8834.17014.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8834 1441..5586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930935.1526022-CDS-Ecto-sp9_F_contig8834:1440..18181622930935.1526022-CDS-Ecto-sp9_F_contig8834:1440..1818Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 1441..1818 -
1692278956.3135552-CDS-Ecto-sp9_F_contig8834:1440..18181692278956.3135552-CDS-Ecto-sp9_F_contig8834:1440..1818Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 1441..1818 -
1622930935.1689475-CDS-Ecto-sp9_F_contig8834:3403..36021622930935.1689475-CDS-Ecto-sp9_F_contig8834:3403..3602Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 3404..3602 -
1692278956.3267994-CDS-Ecto-sp9_F_contig8834:3403..36021692278956.3267994-CDS-Ecto-sp9_F_contig8834:3403..3602Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 3404..3602 -
1622930935.1907682-CDS-Ecto-sp9_F_contig8834:4094..41801622930935.1907682-CDS-Ecto-sp9_F_contig8834:4094..4180Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 4095..4180 -
1692278956.3398242-CDS-Ecto-sp9_F_contig8834:4094..41801692278956.3398242-CDS-Ecto-sp9_F_contig8834:4094..4180Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 4095..4180 -
1622930935.2138162-CDS-Ecto-sp9_F_contig8834:4569..48211622930935.2138162-CDS-Ecto-sp9_F_contig8834:4569..4821Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 4570..4821 -
1692278956.348258-CDS-Ecto-sp9_F_contig8834:4569..48211692278956.348258-CDS-Ecto-sp9_F_contig8834:4569..4821Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 4570..4821 -
1622930935.231112-CDS-Ecto-sp9_F_contig8834:5484..55861622930935.231112-CDS-Ecto-sp9_F_contig8834:5484..5586Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 5485..5586 -
1692278956.3564217-CDS-Ecto-sp9_F_contig8834:5484..55861692278956.3564217-CDS-Ecto-sp9_F_contig8834:5484..5586Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8834 5485..5586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8834.17014.1

>prot_Ecto-sp9_F_contig8834.17014.1 ID=prot_Ecto-sp9_F_contig8834.17014.1|Name=mRNA_Ecto-sp9_F_contig8834.17014.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=339bp
TPEAGEEGGFRGGTMEAETTRTSFAGTSGFMAPEVESGRPSSLASDMYSL
GAVLFHMHFPDHPTGPLPVAEGGGAAAAGGGGSAGVIPRSADVATADLLK
ALLAVDPAGRPRASDALQAKYFRVSHVSRLQQDGALLEQTRKLEAVRVLF
RTVRDEAKPSGPLKWTVKRDSRYLVPSVMRLVRTDAAGSALRRALKITFQ
GEAGVDEGGILSEMYTLLFEAMMLPRFGLFENCDSPPPLTAEPLGRRPAK
DPTEKSFAPRFSGAVAGAAANEAASVVDDPDDVSRFGAYLEPISGSAEEH
AEEEEDDDAGSDDDGDNFEARREAERSVVEGAAASGAGG
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mRNA from alignment at Ecto-sp9_F_contig8834:1440..5586-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8834.17014.1 ID=mRNA_Ecto-sp9_F_contig8834.17014.1|Name=mRNA_Ecto-sp9_F_contig8834.17014.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4147bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8834:1440..5586- (Ectocarpus species9 EcSCA_722f female)
ACCCCCGAGGCCGGAGAGGAGGGGGGGTTCCGTGGTGGCACGATGGAGGC GGAGACCACCAGAACGAGCTTTGCCGGGACTAGCGGATTCATGGCCCCGG AGGTATCTACGTACATGTGCTGCTGTTGGATGAGGAGTGCATGTACTGCT GTTGGATGAGGAGTGCATGTACCGCTGTTGGATGAGGTGTACGTGTACTG CTGTTTGATGAGGAGTACATGGACTGGTGTTGGACGAGGAGAGCATGCAC CGCTGTTGGACGAGAATTGTGTCTGCTTGGAGTGAGGCGTGATTGGAGGG GGGGCACGGGGGTCCCTCCGTCATTCCTTTAGGCCCTGGGCGCGTCTTCT CCGTGTTTGCCTGTTTATATTTGTGTTTGTGGGGCTGTCCGGAAGGAGAG AGGTGCCCGTTCGCCTGACCCCTACTTGGTAACCGGCGTGAGACACGGGC CCCCTCACGTCTCGGCTTCGACAGGCCGCGGATCGTGATTGGGAGACTCG TGTCGAGGAGAAACATTTTGCGCACGAACAACACGAGAAATACTCATTAG GCAAACCGCTCCACGCATGCACATACACACAACACGAAAGACGAGACGAA AAAGTCCTCCCTTTGTGGACTCCTCCTGCATGTGTGACCTGGGCTTGCCA CCATAAAGTACTGCGAAAGACGGAGAGACTGACGTCCATCAGCAATTTTC CGACACACACGCTCATTTTTCTTTTTACGTGCGTGAAAACTCCCCCGCCC CCTTTCCCCTTGCAGGTGGAATCCGGAAGGCCCTCCTCGCTAGCCTCGGA CATGTACAGCCTGGGAGCCGTGCTCTTCCACATGCATTTCCCCGACCATC CCACCGGCCCGCTCCCCGTAGCGGAGGGGGGGGGGGCGGCGGCGGCGGGC GGTGGTGGTAGTGCAGGCGTTATCCCTCGGAGTGCCGACGTGGCGACGGC GGATTTGCTTAAGGCGCTGCTTGCGGTGGACCCGGCCGGGAGGCCGAGGG CGTCGGATGCCCTCCAGGTGGGATTGGAGGGGGGTGGGGAGGCTCTTCGG TGTGTTGTTGGTAGTTGTTGTTGTTGTTGTTGATGTTGTTGCTGTTGGTC GTGGCGGTGGTGTTGGCGTTGGTGTTGTTGTTGGTGTTGCTGATGTTGTC GTTGTTGTTGTTGTTGTTGTTGCTGCTGGTGGTGTTGATGTTGTTGTTGT TGTTGCTGGTGGTGGTGGTGGTGATGATGATGCTGTCGTGTTGTAGGTTT TGTGGTCGTCCTCGTCGTCGTTGCCATGTCGCATTCGATGCTGTTGACAC TGGTAGTGCGGTGGCTCCATGGTGATGACACGTTGCTTACCACCGCTGGC GCTCTCGGAACTACACCCTCTTTTCCCGTACGCGTGTTCCCACCGCTACC GTTAAGGCAAAATACTTCCGGGTTTCCCACGTGTCAAGGCTTCAACAAGA CGGGGCTCTGCTGGAACAGACCCGCAAGCTCGAGGCCGTTAGGTGAAGAA CAAGCAACTTTGACACTCAAGATAGAAGCGACAACATCGGGCTATTCCCG TGTTGTTGTTGGGACTTGTCTCAGTGCTTAAACTGAGTACCAACACCGTC GCCTCCGCGAAACAATGGAAAAGCCTAACGATCGGCTGCTCCTAGCTGCC GTCCGTTGTTACCCCCGCTTGTAGCAGCAGCAACTTTCCCAATGGCCCGC TCGCTGCGGGGGTCAGAGACCGCCCCCATTTGGCGGTTCCTCCCGAGCTC GGCCTGTTGTTTTACTCCTCAGCCTCCCTCGGTTGCTATCTCTCAGCACC ACACTTGACGACCGTAACCAAAAACACAATGGAAACAATATTGCAGGGTT CCGCACCGTGCTTTGTCTCTTCTCACTGTTGTACCGCCACCCCACCGCCG GAACGAAACAACACCCCATGTATATGGTACGGTTCTGTTCCGCACCGTGT TCTGCCTAAAAATATGGATACACATCCATCGCAGGGTTCTGTTCCGCACC GTGCGGGACGAGGCCAAGCCGAGCGGTCCTCTCAAGTGGACCGTGAAGCG GGACAGCCGGTACCTCGTGCCGTCGGTGATGCGGCTGGTGAGGACGGATG CGGCGGGATCTGCTCTCCGGAGGGCGCTCAAGATCACCTTCCAGGGGGAG GCCGGGGTGGACGAGGGAGGGATTCTCAGCGAGGTGTGCTGCTGTGGTTG GTGGTGGTCGTGGTGGTGTTAGTGTTGTTGTTGTTGTTGTTGCTGCTACT GCTGCTGCTGCTGCTGCTGCTGGATGTTGATGGCAGTGCCAGTGGTGGCG GCGTTGTCTTAAAACTAATTTGTGAAAGGAAATGTTTCACACCCCGTACA AATACAAATGAACAAATACAAACGGTATTTGTGCGCGGCCGCAAGTACCC GTTATTTGTCTGGAAACAAATATTTGCGCACGATCTTGACCCAGTATTTG TCTAGAAACAAATATTTGCACACGATTCTGAACGAGTATTTGTCTCGAGA CAAATATTTGCACACGATTCTGAACGAGTATTTGTCTGGAAACCAATAGT TGCACACATTTTGCCGAGATTGTTTGGCTGGGAACAAGTACAAGAACAAT TAGATATGAGACCTCATCCAGAGGGTATTTGGCTGGAAACAAAACAAATA CAAGAATAGTTCCACATGACACATCTAAAGTAATAGGGATGCGTGCTACG TGCCACCTGCTCCGCATGTGTAAAGCGCCTCTTACTTCTTCTCCGAAGTA TGCGTCATGCGTATACGTAGCAGAGCACGGGCGGGCGTCGAAAGTCCCAG TCTAGAGAGAGGTATTGCATGTGGTGATTGGACATACGGTACAGCATTGT TCGGGTGACGTACGGGATAGGTGATTCTGGCGCTCGCGCAAATAGTTGAT AGTATTCCGCAGCAACGTGACGTACGTACGGGTTGGGCAAATTGCTCTGG TGTACTTTGTGCAGGAAGAGTAGGTAGGGGAGATCGCTCTTCAAGTCGGA GATCGAGAGTCACCTGTTTTTTGTGTTTAGACGTATGAAGGGGGGGCATC ATGTGGTTGTGTTCACGGACGTGCACCCACTCCTCACTCCTCCGTAAATC AAGAGGCAGATTTGTAGGAAAATACCATGGTTTCAGTTTATTTATCGATT TGCACTGAGTCTCTATCGAGATCACATCCTACACGTACGTGCTCTTTTGA CTAGCCACCCACGGTTCATACTTTGACCAAATATTTGTTTGGAAACAAAT ACAATGAGTTTGCACACGATTTTAGACCCTGTATTTGTCTAGAAACAAAT ATTTGCGCACGATTTTGACCCAGTATTTGTCTGGAGACAAATATTTGCGC ACGATCTTGACCCAGTATTTGCCTAGAGACAAATATTTGCGCACGATTCT GATCGAGTATTTGTCTGAGAGACAAATATTTGCACACGATTCTGAACGAG TATTTGTCTGGAAACAAGTATTTGCACACAATTCTGAACGAGTATTTGTC TGGAAACAAATATTTGCACACGATTCTGAACTAGTATTTGTCAAACCAAA CAAATGGCAAATGGAGTATTTGTACAGGGTGTGAAATGTTTGTATTTTTC ATTCGATCCGTGCCGCCACTGAAGTTGCTGCAGGTTTCCTCTCTCAAACC CTTCAACACCGAACCGGAACCCTCATTTTTCTAACCATCCTCTCAACCAA AGCAGCCGCCAGCGCCCAATGTCGTCCCTCTCTTTTCTCAACACCCTCCC TCCCCGTTCCGCCCACAGATGTACACCCTTCTGTTCGAGGCCATGATGCT GCCGAGGTTCGGGCTGTTCGAGAACTGCGACTCCCCCCCCCCGCTAACCG CGGAGCCCCTCGGCCGGCGGCCTGCCAAGGACCCTACCGAGAAGTCCTTC GCCCCGCGGTTCAGCGGGGCTGTCGCCGGCGCCGCGGCTAACGAAGCGGC AAGTGTTGTTGACGACCCCGATGACGTTAGCAGATTCGGCGCCTACTTGG AGCCGATATCCGGGAGCGCCGAGGAGCATGCGGAGGAGGAGGAGGATGAT GATGCAGGCAGTGATGATGACGGCGATAACTTTGAGGCTCGGCGAGAGGC GGAGCGGTCGGTGGTGGAGGGGGCCGCCGCCTCAGGCGCGGGGGGCG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8834:1440..5586-

>mRNA_Ecto-sp9_F_contig8834.17014.1 ID=mRNA_Ecto-sp9_F_contig8834.17014.1|Name=mRNA_Ecto-sp9_F_contig8834.17014.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2034bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8834:1440..5586- (Ectocarpus species9 EcSCA_722f female)
ACCCCCGAGGCCGGAGAGGAGGGGGGGTTCCGTGGTGGCACGATGGAGGC
GGAGACCACCAGAACGAGCTTTGCCGGGACTAGCGGATTCATGGCCCCGG
AGACCCCCGAGGCCGGAGAGGAGGGGGGGTTCCGTGGTGGCACGATGGAG
GCGGAGACCACCAGAACGAGCTTTGCCGGGACTAGCGGATTCATGGCCCC
GGAGGTGGAATCCGGAAGGCCCTCCTCGCTAGCCTCGGACATGTACAGCC
TGGGAGCCGTGCTCTTCCACATGCATTTCCCCGACCATCCCACCGGCCCG
CTCCCCGTAGCGGAGGGGGGGGGGGCGGCGGCGGCGGGCGGTGGTGGTAG
TGCAGGCGTTATCCCTCGGAGTGCCGACGTGGCGACGGCGGATTTGCTTA
AGGCGCTGCTTGCGGTGGACCCGGCCGGGAGGCCGAGGGCGTCGGATGCC
CTCCAGGTGGAATCCGGAAGGCCCTCCTCGCTAGCCTCGGACATGTACAG
CCTGGGAGCCGTGCTCTTCCACATGCATTTCCCCGACCATCCCACCGGCC
CGCTCCCCGTAGCGGAGGGGGGGGGGGCGGCGGCGGCGGGCGGTGGTGGT
AGTGCAGGCGTTATCCCTCGGAGTGCCGACGTGGCGACGGCGGATTTGCT
TAAGGCGCTGCTTGCGGTGGACCCGGCCGGGAGGCCGAGGGCGTCGGATG
CCCTCCAGGCAAAATACTTCCGGGTTTCCCACGTGTCAAGGCTTCAACAA
GACGGGGCTCTGCTGGAACAGACCCGCAAGCTCGAGGCCGTTAGGCAAAA
TACTTCCGGGTTTCCCACGTGTCAAGGCTTCAACAAGACGGGGCTCTGCT
GGAACAGACCCGCAAGCTCGAGGCCGTTAGGGTTCTGTTCCGCACCGTGC
GGGACGAGGCCAAGCCGAGCGGTCCTCTCAAGTGGACCGTGAAGCGGGAC
AGCCGGTACCTCGTGCCGTCGGTGATGCGGCTGGTGAGGACGGATGCGGC
GGGATCTGCTCTCCGGAGGGCGCTCAAGATCACCTTCCAGGGGGAGGCCG
GGGTGGACGAGGGAGGGATTCTCAGCGAGGGTTCTGTTCCGCACCGTGCG
GGACGAGGCCAAGCCGAGCGGTCCTCTCAAGTGGACCGTGAAGCGGGACA
GCCGGTACCTCGTGCCGTCGGTGATGCGGCTGGTGAGGACGGATGCGGCG
GGATCTGCTCTCCGGAGGGCGCTCAAGATCACCTTCCAGGGGGAGGCCGG
GGTGGACGAGGGAGGGATTCTCAGCGAGATGTACACCCTTCTGTTCGAGG
CCATGATGCTGCCGAGGTTCGGGCTGTTCGAGAACTGCGACTCCCCCCCC
CCGCTAACCGCGGAGCCCCTCGGCCGGCGGCCTGCCAAGGACCCTACCGA
GAAGTCCTTCGCCCCGCGGTTCAGCGGGGCTGTCGCCGGCGCCGCGGCTA
ACGAAGCGGCAAGTGTTGTTGACGACCCCGATGACGTTAGCAGATTCGGC
GCCTACTTGGAGCCGATATCCGGGAGCGCCGAGGAGCATGCGGAGGAGGA
GGAGGATGATGATGCAGGCAGTGATGATGACGGCGATAACTTTGAGGCTC
GGCGAGAGGCGGAGCGGTCGGTGGTGGAGGGGGCCGCCGCCTCAGGCGCG
GGGGGCATGTACACCCTTCTGTTCGAGGCCATGATGCTGCCGAGGTTCGG
GCTGTTCGAGAACTGCGACTCCCCCCCCCCGCTAACCGCGGAGCCCCTCG
GCCGGCGGCCTGCCAAGGACCCTACCGAGAAGTCCTTCGCCCCGCGGTTC
AGCGGGGCTGTCGCCGGCGCCGCGGCTAACGAAGCGGCAAGTGTTGTTGA
CGACCCCGATGACGTTAGCAGATTCGGCGCCTACTTGGAGCCGATATCCG
GGAGCGCCGAGGAGCATGCGGAGGAGGAGGAGGATGATGATGCAGGCAGT
GATGATGACGGCGATAACTTTGAGGCTCGGCGAGAGGCGGAGCGGTCGGT
GGTGGAGGGGGCCGCCGCCTCAGGCGCGGGGGGC
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