mRNA_Ecto-sp9_F_contig880.16986.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE) HSP 1 Score: 791 bits (2042), Expect = 5.310e-271 Identity = 426/536 (79.48%), Postives = 455/536 (84.89%), Query Frame = 3
Query: 1074 SLLDHPNRKEGGEFFFHVTEDGAPVPAYKSWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDGTRWLSRRLLSIVFSCFSLAYATTGLVAEQPLSRLSPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFKRVIRFGTEQEEQTSGRQHGGGDVGGNGDVDPGGSCRGDDGGMLGGTSERTGDGEEGSSVVSALAGAERRRGARVLESMPFSLAETKGTLSWTAREEKEGASEGVGGLDRQGEPGSADSSAGLEMLTGMEEGKVASEAARSEGTGVQQVAQALTTVATGS-ASDGAEVQAKDDSA 2678
SLLDHPNRK GG F FHVTEDGAPVP YKSWKSV IQLVLGYADVGTDVDAVVSYYQA HMWWFALGMIFI+GPALFAAIVLLRREHWLRR LVALQLGMLF A SW S+YSP LASLR+MEPLYESVPQLMLQLYGLL+EWDNDGT WLSRRLLSI+FSCFSLAYATTGLVAEQ LSRL+PTA+A+SA CP LTGL+FGAVPA +SSVAVYRSRWNSQ F+WAFL YQVLEIGAKFISL LLA+VWRAYFFLAL WLWGSRA +L RL+AGE RVRSQFRLVGMPFMDSV D L +YD GCALTTVEF+FCLTIGN+F+T+EGGQLP D+GRVWTYVA VCM GKL LGYLIVRPFKRV+RFGTEQEEQTSGRQHGGGDVGGNGDVDPGGS R DD GMLG T RTG G+EGS V ALA RGARV E M S + TLSWTA E+ E AS GLDRQGEPGSA SSAGLEM+TGMEEGKV SE A SEGT ++ V LT VATG SD AEVQ ++DSA
Sbjct: 34 SLLDHPNRK-GGAFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRREHWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAASASCPGLTGLVFGAVPA-NSSVAVYRSRWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFKRVVRFGTEQEEQTSGRQHGGGDVGGNGDVDPGGSSRADDEGMLGDTRARTGYGDEGSRGVVALAS----RGARVHEGMSLSRTVNRRTLSWTALEDSEEASRVGVGLDRQGEPGSAGSSAGLEMMTGMEEGKVTSEVAPSEGTDLEPVLHILTHVATGRLVSDDAEVQGEEDSA 563
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE) HSP 1 Score: 221 bits (563), Expect = 2.010e-58 Identity = 139/383 (36.29%), Postives = 211/383 (55.09%), Query Frame = 3
Query: 1107 GEFFFHVTEDGAPVPAYK----SWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDG--TRWLSRRLLSIVFSCFSLAYATTGLVAEQPLS-----------RLSPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFKRVIRFGTEQEEQTSG 2204
G+F + +G P+PA + ++K +++ ++LGYAD+ +D+ VSYY+A+H WF LG+ F LGPA+ + L W RR LVA QL +L EA + + YSP LA +R++ PL+ESVPQL+LQL+ +L W + L+ R++S+ S SLAYA T + + + LS RL P PSLTG++F VPA +S + ++ +W L+Y VLEI A+F+ LA+L V R +FF L++LW R LI+ + V R RLV MPF+DS+ D ++ G LT VEF+ C+ I +++ ++ LP+ V VA CM GK+ L ++ + P K + Q + G
Sbjct: 40 GKFITGIALNGPPLPAVRDPLHAFKILIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPC-------FPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVW--MTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDD---LPSRARLVLVTVASCCMVGKMCLAWVAISPLKVDGHYSESQGDSVLG 410
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI) HSP 1 Score: 228 bits (582), Expect = 4.420e-58 Identity = 141/368 (38.32%), Postives = 213/368 (57.88%), Query Frame = 3
Query: 1107 GEFFFHVTEDGAPVPAYK----SWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDG--TRWLSRRLLSIVFSCFSLAYATTGLVAEQPLS-----------RLSPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFK 2159
G+F + +G P+PA + ++K +++ ++LGYAD+ +D+ VSYY+ARH WF LG++F LGPA+ ++ L W RR LVA QL +L EA + + YSP LA +R++EPL+ESVPQL+LQL+ +L W + L+ R++S+ S SLAYA T + + + LS RL P PSLTGL+F VPA +S + ++ +W L+Y VLEI A+F+ LA+L +V R +FF L++LW SRAL++ +A V R RLV MPF+DS+ D ++ G LT VEF+ C+ + +++ ++ LP+ V VA CM GK+ L + + P K
Sbjct: 387 GKFITGIALNGPPLPAVRGPLHAFKVLIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPC-------FPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVW--MAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDD---LPSRARLVLVTVASCCMVGKMCLALVAISPLK 742
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Hypothetical (leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI) HSP 1 Score: 215 bits (547), Expect = 4.230e-54 Identity = 142/372 (38.17%), Postives = 214/372 (57.53%), Query Frame = 3
Query: 1074 SLLDHPNRKEGGEFFFHVTEDGAPVPAYKSWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVAL-QLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDGTRWLSRRLLSIVFSCFSLAYATTGLVAEQPLSRL--SPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFR----LVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFKRVI 2168
SL +H N + F F V E GAP+P ++S +S++ LVLGY D+ TD+ V+SY+++ WFA+G+ FI GPAL A +LR E + RG+ A QLG++ E S + +YS L +LR++EPL++S+P L+LQ + LLV + L+ R++S++ S SLA A+TG+VAE PLS+L S +A P + + FG VP S + + Q+F+W FLLYQ++EI ++ +SL ++A+ YFF L WLW SR I + G+ V R + +FR P MDSV D + +Y C T VE L +GN + + RV++ ++++ M GK+ LG +V PFK I
Sbjct: 269 SLRNHRNFRR---FVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLR-EKTVGRGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVSEEC-----LALRVVSVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIAC-VSIGDSVVREKLRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNALPHADETRASDLTRRVFSVISLLAMGGKIALGTALVVPFKAKI 630
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Leucine (Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI) HSP 1 Score: 214 bits (546), Expect = 2.800e-53 Identity = 139/375 (37.07%), Postives = 205/375 (54.67%), Query Frame = 3
Query: 1077 LLDHPNRKEGGEFFFHVTEDGAPVP----AYKSWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDG--TRWLSRRLLSIVFSCFSLAYATTGLVAEQPL--SRLSPTANASS----AGCPSLTGLLFGAVPATDSSVAVYRSRW-NSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLL-AGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFK 2159
L +HP K+ F DG P+P A + K +++ + LGY D+ +D+ VSYY + H++WF L + F LGPA+ + L RR LVA QL +L EA S TYSP LA +R++EPL+ESVPQL+LQLY +L+ W L+ R++S+ S SLAYA T + + + L +RLS CPS+T L+F VP S R W + + +W LY VLEI ++F+ L ++A+V R +FFL L +LW SR L++ +GE R + R+V MPF+DS+ D ++ G LT VEF+ C+ ++F ++ LP T +++ CM GK+ L L + P K
Sbjct: 164 LAEHPRFKK---FIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFLPEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDH---LPPHARWTLTIISICCMVGKMRLALLAIIPLK 532
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.130e-44 Identity = 126/350 (36.00%), Postives = 186/350 (53.14%), Query Frame = 3
Query: 1170 SVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLR------REHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDGTRWLSRRLLSIVFSCFSLAYATTGLVAEQPLSRLSPTANASSAGCPS-LTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSR-------------VRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFK 2159
+V++Q+ GY D+ +D+ VSYY++ +WF L + F LGP + A++ L R W+RR LVA QL +L EA+ + ++P L +R++E L+ESVPQL+LQLY L+ W + L RL S+ S SLAY T L + + L R S C S LTGL F VP SS + + +W LLY +LEI ++F+ LA+LA+V R +FFL L +LW SR + + A S R + +LV MPF+DSV D ++ G +T VEF+ C+ I +++ ++ LP ++ VA CM GKL L L + P +
Sbjct: 65 TVMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERNVL--RLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGICPCCSWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDD---LPTNLRLGLYVVASSCMVGKLLLAALAIFPLR 409
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE) HSP 1 Score: 170 bits (431), Expect = 6.060e-42 Identity = 116/308 (37.66%), Postives = 171/308 (55.52%), Query Frame = 3
Query: 1275 MIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWD--NDGTRWLSRRLLSIVFSCFSLAYATTGLVAEQPLS-----------RLSPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFK 2159
+ F LGPA+ A+ +L RR LVA QL +L EA+ + YSP LA +R++EPL+ESVPQL+LQLY +L W + + L+ R +S+ S SLAYA T + + + L RL P C SLTGL+F VPA +S + ++ +W +Y VLEI A+F+ LA+L +V R +F L L++LW SR L++ + EG+ R RLV MPF+DS+ D ++ G LT VEF+ C+ I +++ ++ LP+ V VA CM GK+ L ++ + P K
Sbjct: 13 LFFALGPAVIVALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPC-------CSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVR--VTREGLD-FRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDD---LPSGARLVLVTVASCCMVGKMCLAWVTISPLK 307
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE) HSP 1 Score: 175 bits (444), Expect = 5.240e-41 Identity = 129/375 (34.40%), Postives = 188/375 (50.13%), Query Frame = 3
Query: 1077 LLDHPNRKEGGEFFFHVTEDGAPVPAYKSW----KSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDG--TRWLSRRLLSIVFSCFSLAYATTGLVAEQPL--SRLSPTANASSA----GCPSLTGLLFGAVPATDSSVAVYRSRW-NSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLA-GEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAGKLGLGYLIVRPFK 2159
L +HP K+ F DG P+P K +++ + LGY D+ +D+ + QA + F G RR LVA QL +L EA S TYSP LA +R++EPL+ESVPQL+LQLY +L+ W L+ R++S+ S SLAYA T + + + L +RLS + CP +TGL+F VP S R W + + +W LY VLEI ++F+ L ++A+V R +FFL L +LW SR L++ GE R + R+V MPF+DS+ D ++ G LT V+F+ C+ ++F G LP T +A+ CM GK+ L L + P K
Sbjct: 93 LAEHPRFKK---FIVGRAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYTPTTI-QATYF-EFTCG----------------------RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLF---SSGHLPPHARWTLTIIAICCMVGKMRLALLAILPLK 437
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: HTH (psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 3.370e-29 Identity = 109/333 (32.73%), Postives = 156/333 (46.85%), Query Frame = 3
Query: 1134 DGAPVPAYK----SWKSVVIQLVLGYADVGTDVDAVVSYYQARHMWWFALGMIFILGPALFAAIVLLRREHWLRRGLVALQLGMLFEAFASWYDSTYSPTLASLRMMEPLYESVPQLMLQLYGLLVEWDNDGTRWLSRRLLSIVFSCFSLAYATTGLVAEQPLSRLSPTANASSAGCPSLTGLLFGAVPATDSSVAVYRSRWNSQNFIWAFLLYQVLEIGAKFISLALLAVVWRAYFFLALLWLWGSRALILHRLLAGEGVSRVRSQFRLVGMPFMDSVTDTLNSYDRGCALTTVEFMFCLTIGNIFFTNEGGQLPADIGRVWTYVAVVCMAG 2120
DG P+P + + K +V+ + LGY D+ +D+ V Y++ H W LG+ F LGPAL +I L W RR LVA L +++EA+ + D YSP LA +R++EPL+ESVPQL+LQLY +L+ W T RL+ + C S+ L + A TD S FL Q E+ F+SLA+ V R + L LL+LW SR +I+ + A + R + RLV MPF DS+ D + T +EFM CL + + + ++ L A R T V CM G
Sbjct: 46 DGPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTE--TMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSV----CISVASLAYAA---TDVSSV-------------EFLATQTGEVS-YFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVX-IWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDD---LSASARRALTIVVCSCMVG 351
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX1_9PHAE) HSP 1 Score: 101 bits (252), Expect = 2.570e-22 Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 3
Query: 21 MASTDRAALLALFRSTRGSGWKNSNNWNTAAPLSDWYGVRVDGEGRVVELRLQDNNLR 194
MASTDRA L ALF+STRGSGWK SNNWNT APLSDWYGV VDGEGRVV L L DNNL+
Sbjct: 1 MASTDRAVLSALFQSTRGSGWKQSNNWNTDAPLSDWYGVDVDGEGRVVNLCLPDNNLQ 58 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig880.16986.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig880.16986.1 >prot_Ecto-sp9_F_contig880.16986.1 ID=prot_Ecto-sp9_F_contig880.16986.1|Name=mRNA_Ecto-sp9_F_contig880.16986.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=891bp MSSAMASTDRAALLALFRSTRGSGWKNSNNWNTAAPLSDWYGVRVDGEGRback to top mRNA from alignment at Ecto-sp9_F_contig880:2437..23178- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig880.16986.1 ID=mRNA_Ecto-sp9_F_contig880.16986.1|Name=mRNA_Ecto-sp9_F_contig880.16986.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=20742bp|location=Sequence derived from alignment at Ecto-sp9_F_contig880:2437..23178- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig880:2437..23178- >mRNA_Ecto-sp9_F_contig880.16986.1 ID=mRNA_Ecto-sp9_F_contig880.16986.1|Name=mRNA_Ecto-sp9_F_contig880.16986.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5346bp|location=Sequence derived from alignment at Ecto-sp9_F_contig880:2437..23178- (Ectocarpus species9 EcSCA_722f female)back to top |