mRNA_Ecto-sp9_F_contig88.16980.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig88.16980.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH6_ECTSI) HSP 1 Score: 1111 bits (2874), Expect = 0.000e+0 Identity = 705/992 (71.07%), Postives = 718/992 (72.38%), Query Frame = 1
Query: 169 MSRLSYSETRDGIVPGVSEEGVETKGPSTSGGKRKRARDDDIDGVAEADANDGSGGASSPGADSLSSYSLMGVADGNDGKDAAGGVCKVEAEAAVADGAPSSSADGXXXXXXXXPXXXXXXXXVVEIPPPSAAPAVMEVSEEADCDSGGFNSGPPGTAAAPISIESGEAPQKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSGEQRPSKKTRKSAGAKAKDSDGGSEGGSXXXXXXXXXDTDESKGNGKDXXXXXXXXXDGLEGPVLFTVGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPPVVPVIEPINDDYLASFGRSYAEAKSLTAQDKTENTATQDDXXXXXXGGDDGD------SQAGDENGXXXXXXXXXXXXXNGTAEKDAADREAAKTEGSGSPTKKNSLSGGRKKHGVFLVNLLYTLCDEEKLESLFSTFGRVTAVVLTRPPEGKKVSGSASVYFDTSEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDDKNCPFNACSRCWEEGHLVDACPYVDVMEEGPEPYXXXXXXXXXXXXXXXTACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGDAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNSVAGGXXXXXXXXXXXKTYMMCYNCGKQGHGKSECPVPRQTQTPGRFGTSNNYNRNDQPRVPAADWKQEWSASNNNPLSSNSLSQNRGSGKFRNDPMGSGQQHQHQAQQPTHLPSAYLNDLAQPPSPLQSTRRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGTHNRYQHQMATPTDSRSSFPRWGDNAAVSNGGSGSGTFQRAYHPGGNFGSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGQRGGYHSYSRDQHQPAXXXXXXXXHHGSGSHQRSSYSSGQPYSSGGQSYSAGRRGGGTRDSHANPRSYGY 3126
MSRLSYSETRDGIV GVSEEGVETKGPS SGGKRKRARDDDIDGVAEA+AN GSGGA+SPGADSLSSYSLMGVADGNDGKDAAGGV KVE EAA ADGAPSSSADG P XXXXX VEIPPPSAAPAVME+SEEADCDSGGFNSGPPGTAAAPISIESGEAPQKK VGSGEQRPSKK RKSAGA XXXXXXXXX XXXXXXX DGLEGPVLF VGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPP VPVIEPINDDYLASFGRSYAEAKSLTAQDK ENTATQDD DGD SQAGDENG X XX N TAEKDAA REAAKTEGSGSPTKKNSL GGRKKHGVF+VNLLYTLCDEEKLESLFS FGRVTAVVLTRPPEG+KVSG ASVYFDT+EEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDD EEGHL DACPYVDVMEEGPEPY TACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERG AMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNS A XXXXXXXXXXXKTYM+CYNCGKQGHGKSECPVPRQTQTPGRFGT +N G HQHQ ERGGTHNRY+HQMA+PTDSRSSFPRWGDN AVSNGGS SGT RAYHPGGNFGSDSXXXXXXXXX XXXXXXXXXXXXXXXSSRGQ+GGYHSYSRDQHQPAXXXXXX HH SGSHQ S YSSGQPYSSGGQSYSAGRRGGGTRD+HA+PRSYGY
Sbjct: 1 MSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDGVAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAAAADGAPSSSADGNAGSGADAPAADXXXXXXVEIPPPSAAPAVMELSEEADCDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQEDGDDGSGS-VGSGEQRPSKKARKSAGAXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDD---------DGDXXXXXXSQAGDENGGGXDKEGPSXXEKNSTAEKDAAGREAAKTEGSGSPTKKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEGQKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDD------------EEGHLADACPYVDVMEEGPEPYCSVCGKAGHSIDACETACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNSSAXXXXXXXXXXXXXKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGTHHN----------------------------------------------GGGYHQHQQ------------------------------------------------------------ERGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSNGGSSSGTLHRAYHPGGNFGSDSXXXXXXXXXEDRHRSSGHRGERXXXXXXXXXXXXXXXSSRGQKGGYHSYSRDQHQPAXXXXXXYSHHSSGSHQCSRYSSGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY 859 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig88.16980.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig88.16980.1 >prot_Ecto-sp9_F_contig88.16980.1 ID=prot_Ecto-sp9_F_contig88.16980.1|Name=mRNA_Ecto-sp9_F_contig88.16980.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1043bp MPLRGYAESTTLNVYHTPNSDLRWSPMPHAQATRLESREGTPRGALLPPVback to top mRNA from alignment at Ecto-sp9_F_contig88:19259..29155+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig88.16980.1 ID=mRNA_Ecto-sp9_F_contig88.16980.1|Name=mRNA_Ecto-sp9_F_contig88.16980.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9897bp|location=Sequence derived from alignment at Ecto-sp9_F_contig88:19259..29155+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig88:19259..29155+ >mRNA_Ecto-sp9_F_contig88.16980.1 ID=mRNA_Ecto-sp9_F_contig88.16980.1|Name=mRNA_Ecto-sp9_F_contig88.16980.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6258bp|location=Sequence derived from alignment at Ecto-sp9_F_contig88:19259..29155+ (Ectocarpus species9 EcSCA_722f female)back to top |