mRNA_Ecto-sp9_F_contig88.16979.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Ornithine (transcarbamoylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH5_ECTSI) HSP 1 Score: 608 bits (1569), Expect = 1.960e-214 Identity = 318/320 (99.38%), Postives = 318/320 (99.38%), Query Frame = 2
Query: 80 MTGVQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGKLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSMLDM 1039
MTGVQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEA VPVINALSDLHHPLQTLADLMTIQERFGKLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTG HVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSMLDM
Sbjct: 1 MTGVQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEARVPVINALSDLHHPLQTLADLMTIQERFGKLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGTHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSMLDM 320
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Ornithine (carbamoyltransferase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0S5_9STRA) HSP 1 Score: 404 bits (1038), Expect = 2.430e-133 Identity = 214/316 (67.72%), Postives = 248/316 (78.48%), Query Frame = 2
Query: 89 VQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGK-LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
+ GV+SLAG+SL+SIADLS EL LLD S +LK ++K +S + L G SVAMIFQKRSTRTRVSTETGM LLGG ALFLGP+DIQLGVNE MKDTA VLS FNSL+LARV HADV EL A VPVINALSDLHHPLQ LADL+T+QE FGK L G T WVGDGNNVLHDLMLGAAKL +N+ IA P GY PD V T+ L G +++T DP A TGA+VV TDTW+SMGQEE++ KR+KD+ GY+V ++LMS AA+DA+F+HCLPRHKEEV D VFYS +S+VFPEAENRMWTVMA+M S L
Sbjct: 54 IHGVESLAGKSLLSIADLSTEELQGLLDLSASLKSSYKQNSVA----RPLSGSSVAMIFQKRSTRTRVSTETGMSLLGGHALFLGPSDIQLGVNECMKDTALVLSRFNSLVLARVFAHADVTELAQHATVPVINALSDLHHPLQALADLLTLQEHFGKDLSGKTVAWVGDGNNVLHDLMLGAAKLGMNVNIACPTGYEPDAGVLEATKELLLAGGGELVMTTDPVVACTGANVVVTDTWISMGQEEDSKKRLKDFAGYEVNNDLMSNAAEDAVFLHCLPRHKEEVSDEVFYSAKSLVFPEAENRMWTVMAVMLSQL 365
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XZ83_9STRA) HSP 1 Score: 384 bits (986), Expect = 9.060e-126 Identity = 201/311 (64.63%), Postives = 240/311 (77.17%), Query Frame = 2
Query: 107 LAGRSLMSIADLSKAELIELLDCSIALKKAF-KDSSS-GIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGKLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
+AGR +SI +LS EL LLD S K + KDS+ G E + L GKSV+MIFQKRSTRTRVSTETGM LLGG ALFLGP+DIQLGVNESM+DTA VLS FNS++LARV H D+ EL A VP+INALSDLHHPLQTLADLM +++ FG L+G T WVGDGNNVLHDLM+GAAKL +N+ +ATP GY + + +T+ LA E+G V +TA EAVTG+ VV TDTWVSMGQEEE AKRI+++ GY+V LM+ A D A+F+HCLPRH EEV D VFYSE+S+VFPEAENRMWTVMA+M + L
Sbjct: 37 MAGRHFLSIDELSNEELRGLLDLSKQYKATYGKDSTMPGTEAPKPLTGKSVSMIFQKRSTRTRVSTETGMNLLGGHALFLGPSDIQLGVNESMRDTANVLSRFNSIILARVYGHDDIVELSKHATVPIINALSDLHHPLQTLADLMALEDHFGDLKGKTLAWVGDGNNVLHDLMIGAAKLGMNVNVATPAGYEANSRIVDITKKLADENGGKVFLTAVADEAVTGSDVVVTDTWVSMGQEEEYAKRIEEFAGYEVNSSLMAKANDGAVFLHCLPRHPEEVTDEVFYSEQSLVFPEAENRMWTVMAVMAAQL 347
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEV3_9STRA) HSP 1 Score: 380 bits (977), Expect = 1.970e-124 Identity = 200/319 (62.70%), Postives = 244/319 (76.49%), Query Frame = 2
Query: 92 QGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAF--KDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFG--KLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSS-VLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
Q +K LAGR +SI +LS EL LLD S K + K + + +E + L G+SV+MIFQKRSTRTRVSTETGMGLLGG++LFLGP+DIQLGVNESMKDTA VLSGFNSL+LARVN H+++ EL A VP+INALSDLHHPLQTLADLM +++ FG K+ G T WVGDGNNVLHDLMLG+AKL +N+RIATP+GY D + T LAKE+ + V +T EAV + V+ TDTWVSMGQEEE KRIK+++GY+V ELM A DDA+F+HCLPRH EEV D VFYS+ S++ PEA+NRMWTVMA+M + L
Sbjct: 28 QSLKGLAGRHFLSIDELSNEELRGLLDLSKHYKATYGKKSTVAPLEAPKPLTGQSVSMIFQKRSTRTRVSTETGMGLLGGQSLFLGPSDIQLGVNESMKDTALVLSGFNSLILARVNTHSEISELAKHATVPIINALSDLHHPLQTLADLMALEDHFGTDKIRGKTVAWVGDGNNVLHDLMLGSAKLGMNVRIATPKGYECDAGILEKTRQLAKENETEDVFLTTVADEAVKSSDVIVTDTWVSMGQEEEYEKRIKEFDGYEVNSELMKKANDDAVFLHCLPRHAEEVTDEVFYSDASLILPEAQNRMWTVMAVMAAQL 346
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1C7_9STRA) HSP 1 Score: 375 bits (964), Expect = 4.890e-122 Identity = 200/336 (59.52%), Postives = 247/336 (73.51%), Query Frame = 2
Query: 56 SFPSKTGSMTGVQGVKSLA-------GRSLMSIADLSKAELIELLDCSIALKKAFKDSSS--GIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGKLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSS-VLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
S SK S G + + LA GR+ +SI +LS EL LLD S K + S+ +E + GKSVAMIFQKRSTRTRVSTETG LLGG LFLGP+D+QLGVNESM+DTA VLSGFN ++LARV+ H+D+EEL A VPVINALSD HHPLQTLADLM +++ FG++ G T WVGDGNNVLHDLM+G AKL IN+RIATP+GY D + TEALAKE+G++ V T +AV G+ V+ TDTWVSMGQE+E AKR+ +++GY+V +LM+ A D A+F+HCLPRHKEEV D VFYS+ S++FPEAENRMWTVMA+M + L
Sbjct: 41 SIVSKITSTAGARSLSQLAAPLSGMIGRNFLSIDELSNEELRGLLDLSKQYKATYGKGSAIDPLEAPKPFTGKSVAMIFQKRSTRTRVSTETGCYLLGGHGLFLGPSDVQLGVNESMRDTACVLSGFNDIVLARVHGHSDIEELSEHATVPVINALSDKHHPLQTLADLMALEDHFGEMRGKTLAWVGDGNNVLHDLMMGCAKLGINVRIATPKGYACDADILEKTEALAKENGTADVFCTTVASDAVKGSDVIVTDTWVSMGQEDEYAKRVAEFDGYEVNSKLMAKANDGAVFLHCLPRHKEEVTDEVFYSDASLIFPEAENRMWTVMAVMAAQL 376
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXV9_9STRA) HSP 1 Score: 371 bits (953), Expect = 6.960e-121 Identity = 199/326 (61.04%), Postives = 238/326 (73.01%), Query Frame = 2
Query: 59 FPSKTGSMTGVQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGK-LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
FP + S G V +L G +SI LS EL LLD S K+ + D S + K L G S++MIFQKRSTRTRVSTETGM +LGG ALFLGP+DIQLGVNESM+DTA VLS FN L+LARV H D+ +L + VP+INALSDLHHPLQTLADLM +Q+ FGK L G T WVGDGNNVLHDLMLG+ K+ +N++IATP GY PD + A +E LA+E+G S+ T EAV GA VV TDTWVSMGQE+E KR+K+++GYQV ELM A D A+F+HCLPRH EEV D V YS+ S+VFPEAENRMWTVMA+M + L
Sbjct: 19 FPKRFASSLG-SSVSTLKGEHFVSIDQLSNDELKGLLDVSHHYKEIYSDKSKSLPKP--LDGHSLSMIFQKRSTRTRVSTETGMSMLGGHALFLGPSDIQLGVNESMRDTASVLSRFNDLILARVYAHNDITDLAKYSDVPIINALSDLHHPLQTLADLMALQQHFGKDLSGKTVAWVGDGNNVLHDLMLGSLKMGMNVQIATPAGYEPDADIMAKSEVLAEENGVSLTTTTVADEAVNGADVVVTDTWVSMGQEDEYEKRVKEFDGYQVNTELMGKANDGAVFLHCLPRHVEEVTDEVIYSDASLVFPEAENRMWTVMAVMAAQL 341
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D911_CYCTE) HSP 1 Score: 370 bits (951), Expect = 1.020e-120 Identity = 199/313 (63.58%), Postives = 237/313 (75.72%), Query Frame = 2
Query: 107 LAGRSLMSIADLSKAELIELLDCSIALKKAFKDSS--SGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGK-LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGS-SVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
L GR+L+SI +LS EL LL S K+ + ++ S E + L G+S++MIFQKRSTRTRVSTETGM LLGG ALFLGP+DIQLGVNESMKDTA VLS FNSL+LARV H D+ EL A VPVINALSDLHHPLQTLADLM +Q+ FG L+G T WVGDGNNVLHDLMLGAAK+ +N+R+ATP GY P+ + A T LA ++ + +V T D AV GA V+ TDTWVSMGQEEE AKR+K++EGYQV LM+ A A+F+HCLPRH EEV D VFYS +S+VFPEAENRMWTVMA+M + L
Sbjct: 20 LQGRNLLSIDELSNDELSGLLQLSQHYKEIYGKNATVSPCEAPKPLTGQSLSMIFQKRSTRTRVSTETGMFLLGGHALFLGPSDIQLGVNESMKDTALVLSRFNSLILARVFSHNDILELAEHAQVPVINALSDLHHPLQTLADLMALQDHFGNNLQGKTLAWVGDGNNVLHDLMLGAAKMGMNVRVATPTGYEPNETILAKTRQLATDNNTEAVFTTTDASAAVDGADVIVTDTWVSMGQEEEYAKRVKEFEGYQVNSTLMAKANPGAVFLHCLPRHPEEVSDEVFYSRQSLVFPEAENRMWTVMAVMAAQL 332
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFT8_9STRA) HSP 1 Score: 370 bits (951), Expect = 1.540e-120 Identity = 200/315 (63.49%), Postives = 236/315 (74.92%), Query Frame = 2
Query: 98 VKSLAGRSLMSIADLSKAELIELLDCSIALKKAF-KDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGK--LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
V SL G+ MSI LS EL LL+ S K + KD+ + L GKSV+MIFQKRSTRTRVSTETGM LLGG +LFLGP+DIQLGVNE+MKDTA VLS FN L+LARV H DV+EL + VPVINALSDLHHPLQTLAD+M +Q+ FG L+G T +WVGDGNN+LHDLMLG+ KL +N+ IATP GY PD + + T LA ESG++V+ T EAV GAH V TDTWVSMGQEEE AKR+K++ GYQV + LMS A A+F+HCLPRH EEVDD VFY +S+VFPEAENRMWTVMA+M + L
Sbjct: 33 VSSLKGKHFMSIDQLSNDELTGLLNLSHHYKSIYGKDNGPNAKP---LDGKSVSMIFQKRSTRTRVSTETGMFLLGGHSLFLGPSDIQLGVNETMKDTALVLSRFNDLVLARVFKHDDVKELAKHSTVPVINALSDLHHPLQTLADIMALQQHFGSDNLKGKTVSWVGDGNNILHDLMLGSVKLGMNVNIATPVGYEPDGEIMSKTLELASESGANVMTTNIADEAVAGAHAVFTDTWVSMGQEEETAKRLKEFAGYQVNNALMSKADPSAVFLHCLPRHAEEVDDEVFYGPQSIVFPEAENRMWTVMAIMAAQL 344
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MG95_9STRA) HSP 1 Score: 369 bits (948), Expect = 5.890e-120 Identity = 195/312 (62.50%), Postives = 236/312 (75.64%), Query Frame = 2
Query: 107 LAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSS--GIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFG-KLEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
+AGR+ MSI +LS EL LLD S K + +++ + L GKSV+MIFQKRSTRTRVSTETGM LLGG ALFLGP+DIQLGVNESM+DTA VLS FNS++LARV H D+ EL A VPVINALSDLHHPLQTLADLM +++ FG L G T WVGDGNNVLHDLM+GAAKL +N+ +ATP GY + + +T+ LA E+G V +TA +EAV G+ V+ TDTWVSMGQE+E AKRI ++ GY+V LMS A D A+F+HCLPRH EEV D VFYS++S+VFPEAENRMWTVMA+M + L
Sbjct: 43 MAGRNFMSIDELSNKELRGLLDLSKQYKATYGKNATIPPTSAPKPLTGKSVSMIFQKRSTRTRVSTETGMSLLGGHALFLGPSDIQLGVNESMRDTANVLSRFNSIILARVYGHDDIVELGKHATVPVINALSDLHHPLQTLADLMALEDHFGGDLRGKTLAWVGDGNNVLHDLMMGAAKLGMNVNVATPAGYEANERIVNITKQLAGENGGKVFLTAVAEEAVKGSDVIVTDTWVSMGQEDEYAKRIAEFAGYEVNSTLMSKANDGAVFLHCLPRHPEEVTDEVFYSDQSLVFPEAENRMWTVMAVMAAQL 354
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBF1_PHATC) HSP 1 Score: 369 bits (946), Expect = 9.600e-120 Identity = 198/314 (63.06%), Postives = 231/314 (73.57%), Query Frame = 2
Query: 98 VKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEAHVPVINALSDLHHPLQTLADLMTIQERFGK--LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGAHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAADDAIFMHCLPRHKEEVDDAVFYSERSVVFPEAENRMWTVMALMQSML 1033
V +L G+ MSI LSK EL LLD + K + ++ + L G S++MIFQKRSTRTRVS+ETGM LLGG ALFLGP+D+QLGVNESM+DTA VL+ FNSL+LARV HADV EL + VPVINALSD HHPLQTLADLMT+Q+ FGK L G T WVGDGNNVLHDLMLG+A L +N+ IATP GY PD + T A G V T EAV AHVV TDTWVSMGQEEE AKR+ +++GYQV L+S A+ DA+F+HCLPRH EEVDD VFYSERS+VFPEAENRMWTVMA+M + L
Sbjct: 36 VGTLEGQHFMSIDQLSKTELQGLLDVAHHYKAQYATQTANTPRP--LAGHSMSMIFQKRSTRTRVSSETGMALLGGHALFLGPSDVQLGVNESMRDTANVLARFNSLILARVFGHADVTELAKYSAVPVINALSDRHHPLQTLADLMTLQQHFGKDKLRGKTVAWVGDGNNVLHDLMLGSALLGMNVNIATPTGYEPDAQILETTRGFAAAEGMKVQTTTVAAEAVKDAHVVVTDTWVSMGQEEEYAKRVAEFDGYQVNKALISHASPDAVFLHCLPRHPEEVDDEVFYSERSLVFPEAENRMWTVMAVMAAQL 347 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig88.16979.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig88.16979.1 >prot_Ecto-sp9_F_contig88.16979.1 ID=prot_Ecto-sp9_F_contig88.16979.1|Name=mRNA_Ecto-sp9_F_contig88.16979.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=321bp MTGVQGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEback to top mRNA from alignment at Ecto-sp9_F_contig88:13086..19229- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig88.16979.1 ID=mRNA_Ecto-sp9_F_contig88.16979.1|Name=mRNA_Ecto-sp9_F_contig88.16979.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6144bp|location=Sequence derived from alignment at Ecto-sp9_F_contig88:13086..19229- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig88:13086..19229- >mRNA_Ecto-sp9_F_contig88.16979.1 ID=mRNA_Ecto-sp9_F_contig88.16979.1|Name=mRNA_Ecto-sp9_F_contig88.16979.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1926bp|location=Sequence derived from alignment at Ecto-sp9_F_contig88:13086..19229- (Ectocarpus species9 EcSCA_722f female)back to top |