mRNA_Ecto-sp9_F_contig879.16971.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Early-responsive (to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI) HSP 1 Score: 1709 bits (4425), Expect = 0.000e+0 Identity = 963/1055 (91.28%), Postives = 972/1055 (92.13%), Query Frame = 2
Query: 29 MSLSWSDHTFDGVLFQPHGVEQHRGLLNMSSIPTKYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDILMYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGMYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGMLCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRRRFGWGPTLPSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDDDG-VEGGPAEDGLEREGEEVGLLDIAEQGWEEGVDQPADDGSXXXXXXXFPITGTRTAGSDEGGTGVGQRVDRNSAAGAMAEAEARTDAARSSQFGAMEGSGGRGEPGGAMATGGRRKLEEAVEGSGVEVVSGLEYDGNGKKTMQQYQEEYWGQGHQAGXXXXXXXXXXXXXXXAGWGTTVRPSMAPRLSVDLINVDPVKELVKMTAQQTLHTMRAKSLHYRRARGAGYGTAAVSGNHTPPKGXXXXXXSINSNGSSLNSSGRVGGGIGNGLSPKSTPGAERNPTDSSWWRRCLGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXYQHYRQRRPMTKKGKGYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPAVMAMLTKKKAWGRPIHGDTVEARRHRFDSQTSNASNGGXXXXXXXXXXXXXXXXXXXXXXXXXXARPASGASSPVNSGSSSNRIPMHPGGFYYGQV 3190
MSLSWSDHTFD VLFQPHGVEQHRGLLNMSSIPTKYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDIL YAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALG+YLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTG+LCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRRRFGWGPTLPSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDDDG VEGGPAEDGLE EGEEVGLLD+AEQGWEEGVD+P DDGS F ITGTRTAGSDEGGTGVG RVDRNSAAGAMAEAEARTDAARS+QFGAMEGSGGRGEPGGAMATGGRRK E AVEG GVEVVSGLEYDGNGKKTMQQYQEEYWGQGHQAGXXXXXXXXXX AGWGTTVRPSMAPRLSVDLINVDPVKELVKMTAQQTLHTMRAKSLHYRRARGAGYGTAAVSGNHTPPKGXXXXXXSINSNGSSLNSSGRV GG+GNGLSPKSTPGAE+NPTDSSWWRRCLGRDR XXXXXXXXXXXXXXXXXXXXXXX YQHYRQRRPMTKKGKGYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQ SE GNLAESWIQMQTLSRYF+FQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPAVMAMLTKKKAWGRPIHGDTVEARRHRFDSQTSNASNGGXXXXXXXXXX XXXXXARPASGASSPVNSGSSSNRIPMHPGGFYYGQ+
Sbjct: 1 MSLSWSDHTFDSVLFQPHGVEQHRGLLNMSSIPTKYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDILTYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGIYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGVLCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRRRFGWGPTLPSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDDDGDVEGGPAEDGLEGEGEEVGLLDMAEQGWEEGVDRPYDDGSGGGRG--FAITGTRTAGSDEGGTGVGLRVDRNSAAGAMAEAEARTDAARSAQFGAMEGSGGRGEPGGAMATGGRRKSEAAVEGGGVEVVSGLEYDGNGKKTMQQYQEEYWGQGHQAGXXXXXXXXXX-----AGWGTTVRPSMAPRLSVDLINVDPVKELVKMTAQQTLHTMRAKSLHYRRARGAGYGTAAVSGNHTPPKGXXXXXXSINSNGSSLNSSGRVVGGVGNGLSPKSTPGAEKNPTDSSWWRRCLGRDRAGGXXXXXXXXXXXXXXXXXXXXXXX-YQHYRQRRPMTKKGKGYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQRSE--------------------------------------------GNLAESWIQMQTLSRYFTFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPAVMAMLTKKKAWGRPIHGDTVEARRHRFDSQTSNASNGGXXXXXXXXXXMAGRHLPIPGNXXXXXARPASGASSPVNSGSSSNRIPMHPGGFYYGQM 1003
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA) HSP 1 Score: 312 bits (799), Expect = 6.420e-87 Identity = 281/957 (29.36%), Postives = 380/957 (39.71%), Query Frame = 2
Query: 122 IPTKYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPD-QTPPDLPSSGFLSWIMPLMAFPEDDILMYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNP---------------------C--------MWLHALGMYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGMLCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRRRFGWGPTLPSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDDDGVEGGPAEDGLEREGEEVGLLDIAEQGWEEGVDQPADDGSXXXXXXXFPITGTRTAGSDEGGTGVGQRVDRNSAAGAMAEAEARTDAARSSQFGAMEGSGGRGEPGGAMATGGRRKLEEAVEGSGVEVVSGLEYDGNGKKTMQQYQEEYWGQGHQAGXXXXXXXXXXXXXXXAGWGTTVRPSMAPRLSVDLINVDPVKELVKMTAQQTLHTMRAKSLHYRRARGAGYGTAAVSGNHTPPKGXXXXXXSINSNGSSLNSSGRVGGGIGNGLSPKSTPGAERNPTDSSWWRRCLGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXYQHYRQRRPMTKKGKGYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPA 2902
+P +S F QTEWV+ TISI A N + ++ L FFWS R+H YFS KR P PPDLP+ GF+ W+ PLM E ++L YAGFD IFLRFY +AFKVF +FA YGL V+IP N+ +S + QT+IN+FN+LSMSN+QHY+ C MW+HA G+YLL+AL YFL VE+R+Y LRH +L R++ HLRTIVV+ ERQ VL L + +A K + G E +H G+ C VN++ QL LN+ I++EQ +++ G + + G K + + + L E +D G R DE G G +E V QQY EE+ +G + G T+RP A R S DL +V P+ E+ + + R +S ++ +VLHC++PGRM A APEPRDV WPN IV+RR HT R + VE++LA LM+ FPV+VTL+S+ SA+ + Q S++++ LC RS +F S VEL QP+ ++ +M+TLP LL VG+ E G +A S IQ+ L R F FQ++NVFLVTTVAG ++L ++ + PS FTLLGETLPKV GFFCDYV IRA T S+EL+R A L A
Sbjct: 38 LPQNMTASSAFGQTEWVEWSTISITAAMNAAVAVICLFFFWSMRQHNAGYFSLKRGRAPPGSVPPDLPT-GFVDWMGPLMGMREQEVLRYAGFDTLIFLRFYKLAFKVFGIFALYGLAVIIPANIAGGQRNSFRVQTSINSFNQLSMSNIQHYDSKASALCIRRTSALKLAIVTEHCSSRLAELQMWVHAFGVYLLTALVQYFLYVEFRFYKQLRHEYLMRRAPHLRTIVVE-----------------------------------------ERQRVLARLERLMALKRITGAEPHHRLGV-CGFGPNVNSIQVYKQQLTTLNMTISSEQARKMLLKPMYTRTGAAAVNSNGAGXXXXNGKKKHTPPTLMREMSL--------------------------------------EHIDM-----------------GARGLLLDEFGAGP---------------------------------------------------IERGV---------------------QQYAEEFSEEGSGSNHSLN------------GGNGTIRPP-ALRGSFDLSDVTPLTEMWGAVQRGPIWNNRRRS-------------------------------------------------------------------------------------------------------------------------------------------ISSEVLHCSKPGRMDAVPAPEPRDVCWPNIIVSRRTHTIRWLLVEVVLAALMVFFPVIVTLMSYAISADQITQRSKLMEGLCMRSQVFRSAVELLQPICLMALMSTLPALLGVVGNLE--GIIAHSRIQLVVLGRLFQFQIINVFLVTTVAGSLFDVLN---------KIANHPSDSFTLLGETLPKVAGFFCDYVTIRALTTTSLELIRVPALLVA 661
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUB0_9PHAE) HSP 1 Score: 272 bits (695), Expect = 6.730e-80 Identity = 179/253 (70.75%), Postives = 185/253 (73.12%), Query Frame = 2
Query: 1070 TLPSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDDDG-VEGGPAEDG-----LEREGEEVGLLDIAEQGWEEGVDQPADDGSXXXXXXXFPITGTRTAGSDEGGTGVGQRVDRNSAAGAMAEAEARTDAARSSQFGAMEGSGGRGEPGGAMATGGRRKLEEAVEGSGVEVVSGLEYDGNGKKTMQQYQEEYWGQGHQAGXXXXXXXXXXXXXXXAGWGTTVRPSMAPRLSVDLINVDPVKELVKMTAQQT 1810
T SISSVDMSYDLGTKPNREAGPIERVVLQERLDED+DG VEG L+ EGEEVGLLD+AEQGWEEGVD+PADDGS XXXXXX EAE RTDAARSSQFGAMEGSGGRGEPGG MATGGRRKLEE VEG GVEVVS LEY GNGKK MQQYQEEYWG+GHQAG XXXXXXX GWGT VRPSMAPRLSVDLINVDPVKELVKM + T
Sbjct: 10 TYQSISSVDMSYDLGTKPNREAGPIERVVLQERLDEDEDGDVEGXXXXXXXXXXXLKGEGEEVGLLDMAEQGWEEGVDRPADDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EAEVRTDAARSSQFGAMEGSGGRGEPGGTMATGGRRKLEEGVEGGGVEVVSRLEYAGNGKKAMQQYQEEYWGKGHQAGEGGSGXXXXXXX----GWGTVVRPSMAPRLSVDLINVDPVKELVKMVSSVT 257
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXJ8_HETAK) HSP 1 Score: 206 bits (524), Expect = 9.070e-55 Identity = 124/306 (40.52%), Postives = 183/306 (59.80%), Query Frame = 2
Query: 140 NASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRH--YPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDILMYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGMYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGMLCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRR 1051
++S + Q+E +D+DTI + N + L L F R+ +P FS++R +LP QTPPDLP S SW+MP MAF D+IL YAG DA +++RF+ + ++F +FA YGL VLIPVN + SN Q+ FN L++SN+ + MW H +GMYLL+A+ M+ LVVE+R YT LRH FLRR+ A R+++V+ VPR +RS + L YF LYP +VV V + Q L L LI +R++VL L + + G+ Y + G + V + +L LN ++ EQ +R+ +R+
Sbjct: 3 DSSAYDQSENLDLDTIGLTFLLNGLAGLTFLVIFGKLRQRTTHPYSFSTRRLHLPKQTPPDLPKSSIFSWVMPCMAFNFDEILYYAGLDALMYIRFHWLGLRIFGIFAVYGLCVLIPVNAL----GSNGEQS---LFNTLTLSNIADGSNTMWFHVVGMYLLTAITMWQLVVEFRTYTRLRHEFLRRRRALFRSVLVEEVPRPLRSQATLRAYFEKLYPGQVVEVFLCQRLEALTRLIEQRESVLAKLEHAMVHQQRFGKTTYVWRGW----GHKEEAVTYWQARLHELNDEVSREQARRLRFARQ 297
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: ERD (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKU1_9PHAE) HSP 1 Score: 190 bits (482), Expect = 8.510e-46 Identity = 106/228 (46.49%), Postives = 155/228 (67.98%), Query Frame = 2
Query: 2213 RAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFL 2896
RAFVTF++F AATVARQVLH A PGRMAA +PE RD+YW N VT+ Q RR+ VE+ L VL + + V VTLL + S +++ +++ V L +++F ++V+L QP+A++ +M TLP L+R +G A G AES Q LSRYF FQ++NVFLVTTVA ++ +++ ++++P+ FTLLGE LPKV GFFC+Y+I++ F G+ +EL R+ + +
Sbjct: 527 RAFVTFKTFSAATVARQVLHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGVLYVFYVVPVTLLYLLLSEDSVTSYADWVAELYDNNTIFAALVQLLQPVALLVLMNTLPPLIRLLGM--AEGFPAESRNQQAVLSRYFYFQIVNVFLVTTVANSILDTISE---------IVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLM 743
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.960e-45 Identity = 107/232 (46.12%), Postives = 147/232 (63.36%), Query Frame = 2
Query: 2201 GYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFL 2896
G RAFV+F++F AT+ARQV H + GR+ A APEPRDVYW NA + R RRV V+ LAVL + + V VT L VFS E L HS ++++ C R + ++ QP+ ++ +M LP L+R +G A G+ AESW Q LSRYF FQV+NVFLVTT+AG + L+ ++D PS TLLGE+LPK+CGFFC+YV+I+ +G+ +EL R ++ L
Sbjct: 364 GMGPRAFVSFKTFAGATIARQVHHTNKVGRLRAYEAPEPRDVYWQNAHIRRATRLRRRVLVDAFLAVLYVFWVVPVTGLYLVFSTEALSAHSALLRDSCARDGWLCTALDSVQPVMLLALMNALPPLIRALG--VAEGSAAESWNQKVALSRYFYFQVINVFLVTTIAGTVFDTLSL---------IVDSPSKALTLLGESLPKMCGFFCEYVLIKMLSGLWIELSRLFSLL 584
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5Y8_AURAN) HSP 1 Score: 177 bits (449), Expect = 1.520e-41 Identity = 106/243 (43.62%), Postives = 149/243 (61.32%), Query Frame = 2
Query: 2180 PMTKKGKGYSSRA------FVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYA 2890
P K+G+ RA FVTFR+F A VA QV H A PG M AS APEPRDV+W NA ++ +Q T RRV + L+ +L++ + + VTL+S VFS + L H +K L S F++ V++ QPMA+I +M LP +G +E G L+ S + LSRY+SFQ+ NV LVTT+AG V+ L ++++DDP +LLGE+LP+VC FF Y+ I+ F+G+ +EL RA A
Sbjct: 729 PPIKEGEAGGRRATLYDTGFVTFRAFTGAAVATQVFHAATPGGMVASMAPEPRDVFWKNAELSGKQRTTRRVVADCLVVLLLIFYIIPVTLISLVFSEQALKAHWPALKELASDSLAFDACVKMVQPMALIALMLLLPPAFLGLGFWE--GTLSWSENTLTQLSRYYSFQITNVLLVTTIAGSLVKCL---------QKIIDDPQATLSLLGESLPQVCAFFSCYIFIKVFSGLCIELCRAVA 960
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: DUF221-domain-containing (protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERH2_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.980e-33 Identity = 87/234 (37.18%), Postives = 135/234 (57.69%), Query Frame = 2
Query: 2207 SSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPAVM 2908
+ +AFV R+F AAT+A Q +H ++PG M SSAPEPRDV W N V++ R + E L+ +++ + + V L+S + S + L+ S + L + ++LF SV+ L QP+ ++ + LP L +G E G + S IQM+ SRYF FQVLNVFLVTT+AG + + +++ P +LG +LP++ FF +V I+ F G+ +ELVR + L A +
Sbjct: 197 TDKAFVVMRTFAAATIAIQSMHSSKPGAMQVSSAPEPRDVLWSNVYVSKGATRTRSILGEFLVILIISFYIIPVALVSLLVSEQALVSSSPRLAQLDQATALFSSVIALVQPLCIMLMQQILPPLFMAIGRLE--GLVCFSDIQMRAFSRYFLFQVLNVFLVTTIAGSIFDT---------IATIVEKPEEALLMLGNSLPRMSSFFITFVTIKTFFGLGLELVRTMSLLQATI 419
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIB5_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.810e-32 Identity = 95/295 (32.20%), Postives = 155/295 (52.54%), Query Frame = 2
Query: 107 LNMSSIPTKYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPP-----DLPSSGFLSWIMPLMAFPEDDILMYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVN-------------VMETPSDSNQ---AQTNINTFNRLSMSNVQHYNPCMWLHALGMYLLSALAMYFLVVEYRYYTNLRHRFLRRKS-AHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYH 925
+ + IP E+ S + Q +D+ T++I N+ + +T F RR P ++ K P TP LSW+ PLMA ++++L GFD ++LRF +A K+FA FAPY +VL+PVN V+ ++ + A +N+FNRLSM+++ + MW H G+Y+L+ LA+ +L E ++YT +RHRFL +++ + RT++V+ +P E+RS +L YF LYP++V +N+ L L R+A A + R EE++H
Sbjct: 1 MKLDMIPGWLEDPSAYAQAPNLDMSTVAIVALANLFAGTICVTIFEIVRRRSPKTYAPKEALAPGTTPEIGLHRGKAGGAPLSWVRPLMALSDEEVLRCGGFDVLVYLRFVRMATKIFAAFAPYAFVVLLPVNASVFFLTNANGDSVLNESTEEEKTILADPTVNSFNRLSMASMPAKDSRMWFHCFGVYILTGLALRYLQREAKWYTQIRHRFLTQQNDSRHRTVIVRHIPVELRSSQRLCDYFAKLYPDKVCGALCFRNVEILENLEARREAT--------AARAERLEERFH 287
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXG7_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.870e-31 Identity = 91/270 (33.70%), Postives = 140/270 (51.85%), Query Frame = 2
Query: 2174 RRPMTKKGKGYSSRAFVTFRSFGAATVARQVLHCARPGRMAASSAPEPRDVYWPNAIVTRRQHTARRVCVEILLAVLMLLFPVLVTLLSFVFSAENLMQHSEVVKNLCRRSSLFESVVELTQPMAVITVMATLPLLLRWVGHFEASGNLAESWIQMQTLSRYFSFQVLNVFLVTTVAGFAVEILTQQLHAQIVRRLMDDPSVFFTLLGETLPKVCGFFCDYVIIRAFTGMSMELVRAYAFLPAVMAMLTKKKAWGRPIHGDTVEARRHRF 2983
RRP K G + + FV FR+ A VA QV H PG + A+ APEPRDV W N R + L+ +L++ + V VTL++ S L + NL + S + ++ V+ QPMA++ +M LP L +G ++ + E+ + +SRY+SFQ++NV LVTT++G V + ++ +P+ F+LLG +LP+VC FFC YV ++AF G+ +EL R A + L A T + R+H F
Sbjct: 386 RRPPGKMGPSFGA-GFVGFRTLSGAAVATQVFHAEAPGGLVATPAPEPRDVIWRNIGFDTNTRATRGAIADCLVVLLLVFYVVPVTLVAMALSETALCDRYSSINNLVKSSFIADAFVKTIQPMALVGIMLLLPPLFLGLGVWQGCHSWTENTLLQ--MSRYYSFQIINVLLVTTISGSVVNS---------IEEILQEPASTFSLLGGSLPRVCAFFCCYVFMKAFAGLPLELCRGVAAAQQTLKRLIYPSA--------TQQDRKHAF 635 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig879.16971.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig879.16971.1 >prot_Ecto-sp9_F_contig879.16971.1 ID=prot_Ecto-sp9_F_contig879.16971.1|Name=mRNA_Ecto-sp9_F_contig879.16971.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1054bp MSLSWSDHTFDGVLFQPHGVEQHRGLLNMSSIPTKYENASVFHQTEWVDVback to top mRNA from alignment at Ecto-sp9_F_contig879:17354..29212+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig879.16971.1 ID=mRNA_Ecto-sp9_F_contig879.16971.1|Name=mRNA_Ecto-sp9_F_contig879.16971.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=11859bp|location=Sequence derived from alignment at Ecto-sp9_F_contig879:17354..29212+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig879:17354..29212+ >mRNA_Ecto-sp9_F_contig879.16971.1 ID=mRNA_Ecto-sp9_F_contig879.16971.1|Name=mRNA_Ecto-sp9_F_contig879.16971.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6324bp|location=Sequence derived from alignment at Ecto-sp9_F_contig879:17354..29212+ (Ectocarpus species9 EcSCA_722f female)back to top |