mRNA_Ecto-sp9_F_contig878.16959.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: PKS_ER (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2N5_9PHAE) HSP 1 Score: 728 bits (1878), Expect = 8.620e-261 Identity = 372/384 (96.88%), Postives = 378/384 (98.44%), Query Frame = 2
Query: 137 MILAAVAAAALGFVNEANPMTMRAALCSSYGPVDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFDRNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
MILAAVAAAALGFVNEANPMTMRAALCSSYGPVDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQF RNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASY+AAVSTQTELMAELGADK+IDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHS+WQ++RVFMLPVLGKIIGTSL PWGRPRYKF FGLG+DAKRTQFAELFALIEA DVRVVLDG RPR FTTEEVRAAFKLQESGHAHGKVVVQVAE
Sbjct: 1 MILAAVAAAALGFVNEANPMTMRAALCSSYGPVDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFHRNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYIAAVSTQTELMAELGADKAIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSIWQIIRVFMLPVLGKIIGTSLWPWGRPRYKFAFGLGVDAKRTQFAELFALIEAGDVRVVLDGNRPRRFTTEEVRAAFKLQESGHAHGKVVVQVAE 384
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: Hypothetical (protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLM6_9RHOD) HSP 1 Score: 261 bits (667), Expect = 8.500e-79 Identity = 160/330 (48.48%), Postives = 211/330 (63.94%), Query Frame = 2
Query: 296 ASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFDRN-WGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQV 1282
A++G+AL+R A ALAPGDVRV+SG+T E QGPP++P+V GG D+ GVV AVADGE L++GD VV++F+ + GGLAEY + K++ P G+ AA ASSG +A+V+++ + GDRVL++GGSGGVG+ LVQLAR GAS+VAA S+ +L+ LGAD ++DYRE +VW ++ E FDVV DLV GW + I+K G GGRF T P WF+ HS+ +RVF+ P L + + T PRY+FV L + AEL ALIE+ + V LD P PFTT VRAAF LQ S HA GK VV +
Sbjct: 1 AAQGFALIRTHACALAPGDVRVVSGKTREFQGPPAMPFVPGG-DVSGVVAAVADGEPRLRMGDAVVARFNGSPRGGLAEYTVVKTALTTIKPN-GVDFCHAAAIASSGVAALVLAKMLNHGDRVLILGGSGGVGSDLVQLARRFGASFVAATSSDVQLVRRLGADDAVDYREHNVWELERYKREP--FDVVIDLVGGGWHSARRCSASSPGILKCGRDGGRFWTLTPDTA-WFEMHSIADAIRVFLAPALWRRVYTFFNR-SIPRYQFV--LALPEGHESRAELLALIESRALDVTLDPAGPFPFTTAGVRAAFDLQASRHARGKAVVSL 322
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: PKS_ER (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWL3_THAPS) HSP 1 Score: 241 bits (616), Expect = 1.620e-70 Identity = 156/377 (41.38%), Postives = 220/377 (58.36%), Query Frame = 2
Query: 197 TMRAALCSSYGP---VDEVLSVVEDAPRPTFDPAGKASRGYA---LVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLK----VGDKVVSQF-DRNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAE--LGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
TMRAA C+ Y P D VLSVV+D P K G+ LVRV + +LAPGD RV+SG+T E+QGPPSLPY GG D+CGVV AV D E K VGD++ ++F ++ G LAEYAL + C PP +S + AA SSG AV+++ + GDRVL++G GGVG+ L QL R +GASYV AV TE + + L D ++DY + + + + E++ + FDVVFDL GW + ++ R IVK +GG+F+T P F+ HS+W+++++F+ P L + I T + K+ + + + + AL + V+D P PFTTE VR AF+LQ S HA GKVV++VA+
Sbjct: 11 TMRAARCTDYTPNNDYDAVLSVVDDQHTPNLQ-TDKPPAGFTHPMLVRVLSVSLAPGDARVMSGKTRELQGPPSLPYTPGG-DVCGVVVAVPDEENGKKCRFMVGDRIAARFMNKPMGMLAEYALVNTDVCDVVPP-NISSDQAAALVSSGTVAVILADAINEGDRVLILGAGGGVGSHLCQLVRLRGASYVVAVGRDTERLKQKPLCCDDAVDYTQSNPFDTKEWKEDP--FDVVFDLGSGGWPALLNQSSRKSSIVKPSSKGGKFLTLTPDTPL-FEAHSIWKILKIFLFPALWRAIYTRVGFSRSYLPKYSYKMALPSSSDVVTRTLALAAEEKLVPVIDCSGPFPFTTEGVRDAFRLQSSYHAKGKVVIKVAD 381
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: EO (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QWR6_9DINO) HSP 1 Score: 228 bits (581), Expect = 1.550e-65 Identity = 159/370 (42.97%), Postives = 215/370 (58.11%), Query Frame = 2
Query: 200 MRAALCSSYGP-VDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFDRNW--GGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVI-SRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTE-LMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDL--VEKGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
MRAA S YG E+LS+ + PRP G+ + LVRVQA +LAPGD RV++G+T +QGPPS PY+ GG DLCG V V+ GET K GD VV+ FD G LAEY + K+ P A LS + AA SS +A+++ RHV+ GDRVLV+GG GGVG LVQL + GASYVAA STQ E L+ ELG D+ ID +E+ W +EF+ FD+V DL + W+R S G +VK+G GGRFVTTV H W + M + + + T + R + ++ + LG++ K A L +EA ++R VLD F + ++ AF++Q+S AHGKVV+ VA+
Sbjct: 22 MRAAQVSGYGEDASELLSISDTVPRPQLPAKGR----FLLVRVQAASLAPGDCRVMTGKTRLVQGPPSFPYIPGG-DLCGTVVEVSKGETQFKAGDPVVAMFDTAGPRGALAEYKVVKAENAVLKPAA-LSAEDAAALPSSALTAMLLCERHVRSGDRVLVLGGGGGVGCHLVQLLKPHGASYVAATSTQKEDLLGELGVDRVIDRTKENWWEIAEFKDTP--FDLVVDLYGTREPWNRAASSG-----VVKSGRLGGRFVTTVGDTPYMKFRH--WWHIFPLMYDMTARSLWTGIF---RSKPRWSYHLGLEPK--DLARLLRRVEAGELRAVLDS--THQFDLQGLQEAFRIQKSRRAHGKVVIVVAK 369
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: PKS_ER (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNX8_DIALT) HSP 1 Score: 221 bits (564), Expect = 3.350e-63 Identity = 161/372 (43.28%), Postives = 213/372 (57.26%), Query Frame = 2
Query: 200 MRAALCSSYG-PVDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFDRNW------GGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVE--KGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCP-WGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVA 1285
M+AA S +G +DEV+ V +P + +G +VRV A ALAPGDVRV SG +Q P PY+ GG D+CGVVE V G + KVGD V+S F + GGLAEYA+ + PP+ LSP E AA ASSG +A + ++ DRVLV+GG+GGVG+ +VQLAR +GAS+VAA STQ EL+A LGA DY E+ W ++A FD+VFD V GW ++ G VK+ +GGR++T VP F HS+ Q + + P+LG+ I + P R R ++ + LGID A A + + +VVLD P PFT + V AF LQ S HAHGK+VVQVA
Sbjct: 1 MQAATVSQHGGSLDEVVRVANGVVKPAL----RRGKGEMVVRVLACALAPGDVRVWSGECDLMQSPGFFPYIPGG-DVCGVVEDVEPGAPF-KVGDVVISMFGPSAAGPGPAGGLAEYAVVGVKRSTLKPPS-LSPLEGAALASSGLTAFTAAAKIRPSDRVLVLGGAGGVGSSIVQLARRRGASFVAATSTQRELVASLGAHVVHDYTREEWWTLPAYKA--APFDIVFDCVGGLAGWPTCSASGA-----VKSASQGGRWITIVPDEPN-FHIHSVGQALG-HLRPILGRAIASRAWPPTTRVRPRYTYHLGIDPVHLLGATADAAAKG-EFKVVLDSASPLPFTADGVLKAFHLQRSKHAHGKLVVQVA 355
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L189_9STRA) HSP 1 Score: 222 bits (565), Expect = 6.320e-63 Identity = 146/380 (38.42%), Postives = 213/380 (56.05%), Query Frame = 2
Query: 191 PMTMRAALCSSYGPVDEVLSVVEDAPRPTFDPAGKASRGYA--LVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVV-----EAVADGETYLKVGDKVVSQF-DRNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLA-RAKGASYVAAVST--QTELMAE-LGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRVTSKGGRAKP-IVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYK-FVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
P TM+AA YG +D+++ V D P PT S+ LV+ A ALAPGD+RVLSG+T + QGPPS PY+ G D CG+V EAV+D + +GD+V +F N+G L EYA+ S+ A P +S E AA AS+ A +++ ++ G+RVLV+G GG+G+ QL R +GASYV VS T+L + DK++DY ++DVW EF + FDVV D W R+ KP IVK+ +GGR++TT P ++ S+W+M+ +F+ P L + + W R + + L + ++R AL + V+ V+D P PFT + VR A++LQES H HGKVV+ +A+
Sbjct: 21 PQTMKAAQGKGYGDIDDMIFVATDVPVPTLAAVVPESKRKTKMLVKCLAVALAPGDIRVLSGKTRKFQGPPSFPYIPAG-DCCGIVQELPEEAVSDKDLPFTIGDRVAVRFCGENYGALGEYAIV-STLVADKVPQSISSDEAAALASAS-PATLLADRIQPGERVLVLGAGGGLGSHFCQLIKRERGASYVVGVSKAPSTQLTEPPISVDKAVDYNQQDVWTMPEFVDQP--FDVVVDFATGHWPRIVQDHSAGKPLIVKSHAQGGRYITTSPDAPS-YEIPSIWKMMEIFLFPALWRAAASRT--WYRSSLPAYTYALALPSERDVMTRTLALAQDGKVQAVMDPQGPFPFTQQGVRQAYRLQESRHPHGKVVIHIAD 392
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJG4_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.210e-62 Identity = 157/381 (41.21%), Postives = 213/381 (55.91%), Query Frame = 2
Query: 197 TMRAALCSSYGPVDEVLSVVEDAPRPTF------------DPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPS-LPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFD--RNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVIS-RHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVE-KGWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
TM+ A+ + +G +D + + D PRP+ D K + ++RV + ALAPGDVR+LSG+T+ +Q PP PYV G +D+CGVVE V DGET KVGD VVS+FD R GGLAEY L ++ R P LSP + +SG +A +++ R+V+ GDRVL++GGSGGVGT L Q + +GAS++AA ST L+ LGAD IDYR + W EFQ E KFDVV DLV W+ KGG + +K G VT V + + +V FM +L + + W P ++ + A LF + +R VLD P PFT E VR AF+LQ+S HAHGKVVV+V++
Sbjct: 14 TMKVAVATGFGDIDSDVHIRTDWPRPSLKDDDIAFYKKQHDIKPKDDVRFMVIRVLSCALAPGDVRILSGKTSYMQLPPGGHPYVPG-SDVCGVVEEVQDGETKFKVGDVVVSRFDEPRPLGGLAEYRLVRTDLSERAPTK-LSPEQCCGLPASGMAAKLLAERYVQGGDRVLILGGSGGVGTMLCQYVKLRGASFIAATSTTKALVESLGADVVIDYRTTNWWEMEEFQKE--KFDVVLDLVGGDNWE----KGGLSGKAIKRGATYAALVTGVRTEIVVQNTRDVIYVVLWFMSRILRSRLDPRVPRWVAPE-------ALELREGYLAGLFRDFDEGRIRPVLDPASPFPFTEEGVREAFRLQKSIHAHGKVVVKVSD 379
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: PKS_ER (domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HHL5_9ALVE) HSP 1 Score: 215 bits (548), Expect = 1.090e-60 Identity = 150/368 (40.76%), Postives = 214/368 (58.15%), Query Frame = 2
Query: 200 MRAALCSSYGPVDEVLSVVEDAPRPTFDPAGKASRGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETYLKVGDKVVSQFDR-NWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRH--VKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAELGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEK--GWDRVTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKIIGTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
M+A + + +G VD VL V D P+P+ GK +G LVRV +L+PGD+R LSG T I G P+ PYV G D+CG+VEAVA+G + K GD VVS +D GG E A+ AR P L E A A+S + A+ VK+G +VLV+G SGGVG+ +VQLA+ GA++VAA S+ T++++ LGAD +++REE+ W + + ++ AG FD VFD E GW R AK ++K+G +GG+FV V +W + + P LG+ IG+SLC P+Y V +G D + +F L++ +R V+ P FT E V AAF+L ES AHGK+V+++AE
Sbjct: 22 MKAVVVTQFGEVDRVLEEVSDHPQPSLS--GK--KGEILVRVLTCSLSPGDLRRLSGATEVIMGKPNFPYVPCG-DICGIVEAVAEGSAF-KEGDCVVSTWDAFGMGGTGELAIVDEKYTARKPE-NLDIVEAVALANSASYALAGFELGCVKKGAKVLVLGASGGVGSSIVQLAKDAGAAFVAATSSDTQIVSGLGADLVVNHREENWWENQQMKS-AGPFDAVFDCAEGAVGWQR-------AKKMMKSGCKGGKFVAFV--LNEWDIQIKSALGLFTILGPPLGRHIGSSLCSCCSPKYHLV--IGPDVNGESMSRVFELVKEGRLRPVVCPESPFDFTKEGVTAAFRLLESRRAHGKIVIKIAE 370
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U4G7_9STRA) HSP 1 Score: 212 bits (539), Expect = 7.690e-60 Identity = 136/342 (39.77%), Postives = 197/342 (57.60%), Query Frame = 2
Query: 329 ATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETY-----------LKVGDKVVSQFDRNW----GGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAE--LGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDRV---TSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVF-MLPVLGKIIGTSLCPWGR-PRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
A A+APGDVRVLSG+T E+QGPPSLPY+ GG D+CG+V D + D VV+ F+ G +AEYAL + C + P G+SP E AA +SSG +A+ +++ +++GDR+L+ G GGVG++L QLA+ GAS+VA +S + + E L D+++DY +E+ W E+ + FD+V DL+ W + + G+ IVKT +GGRFVT V WF+ HS W+ +F +LP I P + P Y VF + KR + E +L++ + LD P FTTE V++AF+LQES HA GK+VV+VA+
Sbjct: 1 AVAVAPGDVRVLSGKTRELQGPPSLPYIVGG-DVCGIVVEADDXXXXXXXXSKINNHDFRQDDLVVAMFNIEELGPRGAMAEYALVNTKVCDKVPD-GVSPEEAAAVSSSGLAAMAVAQCIQKGDRILIFGAGGGVGSYLTQLAKRHGASFVAGISRHPQRILEPPLSCDEAVDYTQENPWEKEEWINDP--FDLVIDLIGGCWIELIHHSKSSGKGGMIVKTAKKGGRFVTMVAD-DPWFEAHSFWKATILFALLPAWRAIYTRVTRPISQLPTYSMVF---LQGKREKLTEALSLLKDGTIISCLDPSSPVAFTTEAVQSAFRLQESRHAQGKIVVRVAQ 334
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Match: PKS_ER (domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3K3_THAOC) HSP 1 Score: 213 bits (541), Expect = 1.840e-59 Identity = 147/374 (39.30%), Postives = 211/374 (56.42%), Query Frame = 2
Query: 191 PMTMRAALCSSYGP-VDEVLSVVEDAPRPTFDPAGKAS-RGYALVRVQATALAPGDVRVLSGRTAEIQGPPSLPYVAGGADLCGVVEAVADGETY-LKVGDKVVSQF-DRNWGGLAEYALAKSSQCARNPPAGLSPAEVAATASSGASAVVISRHVKRGDRVLVIGGSGGVGTFLVQLARAKGASYVAAVSTQTELMAE--LGADKSIDYREEDVWASSEFQAEAGKFDVVFDLVEKGWDR-VTSKGGRAKPIVKTGWRGGRFVTTVPPCGKWFDGHSMWQMVRVFMLPVLGKII-GTSLCPWGRPRYKFVFGLGIDAKRTQFAELFALIEASDVRVVLDGGRPRPFTTEEVRAAFKLQESGHAHGKVVVQVAE 1288
P TM+AA S YG +VL++ E PT + A + L++V + ALAPGDVRV+SG+T E+QGPP P G D+CG+V V + E +VG +V ++F ++ G L EYAL S C P +S E AA SS AV+++ +K+GDRVL+ G GGVG+ L QLAR +GAS+VA V+ T+ + E L D++IDY D ++ F+ + FDV+ DL + + V SK K I+K+ +GGR+ TT P F+ HS + ++VF+ P L + I S+ + P Y +VF L + L +++ +D P PFTTE +R AFKLQ S HA GKVV+ V+E
Sbjct: 22 PDTMKAARVSDYGDDAAKVLTIEEGVKVPTLEDTPPAEFKDSMLIKVLSVALAPGDVRVMSGKTRELQGPPGGPPYTPGGDVCGIVVQVPEDEKCRFRVGQRVAARFLNKPMGALGEYALVSMSVCDVVPDDSISSNEAAALVSSATVAVILADRIKKGDRVLIFGAGGGVGSHLCQLARLRGASFVAGVARDTQRLLEKPLCCDQAIDYTATDPFSIQTFKDDP--FDVIVDLSCGNFPKIVASKSKSKKSIIKSASKGGRYYTTNPDKPV-FELHSWYGAMKVFLFPALWRAIYSRSIYRYSLPSYSYVFALPETSDIV--TRTLNLANEGELQASIDPQAPFPFTTEGLRDAFKLQGSYHAKGKVVISVSE 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig878.16959.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig878.16959.1 >prot_Ecto-sp9_F_contig878.16959.1 ID=prot_Ecto-sp9_F_contig878.16959.1|Name=mRNA_Ecto-sp9_F_contig878.16959.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=385bp MILAAVAAAALGFVNEANPMTMRAALCSSYGPVDEVLSVVEDAPRPTFDPback to top mRNA from alignment at Ecto-sp9_F_contig878:18832..22923- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig878.16959.1 ID=mRNA_Ecto-sp9_F_contig878.16959.1|Name=mRNA_Ecto-sp9_F_contig878.16959.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4092bp|location=Sequence derived from alignment at Ecto-sp9_F_contig878:18832..22923- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig878:18832..22923- >mRNA_Ecto-sp9_F_contig878.16959.1 ID=mRNA_Ecto-sp9_F_contig878.16959.1|Name=mRNA_Ecto-sp9_F_contig878.16959.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2310bp|location=Sequence derived from alignment at Ecto-sp9_F_contig878:18832..22923- (Ectocarpus species9 EcSCA_722f female)back to top |