mRNA_Ecto-sp9_F_contig8754.16937.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Rhodanese (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J605_9PHAE) HSP 1 Score: 385 bits (988), Expect = 6.880e-130 Identity = 190/195 (97.44%), Postives = 192/195 (98.46%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSESRSLPVYCICRRGVDSKAAVLILAKKGFPNVMDVSGGLTEWARTVDREFPMY 585
+PGVIGCLQATEALKVLG FGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTV SMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSE+RSLPVYCICRRGVDSKAAV ILAKKGFPNVMDVSGGLTEWARTVDREFPMY
Sbjct: 288 IPGVIGCLQATEALKVLGGFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVRSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSENRSLPVYCICRRGVDSKAAVSILAKKGFPNVMDVSGGLTEWARTVDREFPMY 482
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Adenylyltransferase (and sulfurtransferase MOCS3 homolog n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6H5_9CRUS) HSP 1 Score: 160 bits (404), Expect = 3.980e-43 Identity = 82/209 (39.23%), Postives = 126/209 (60.29%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPT---VLSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKV-ETLSES----------RSLPVYCICRRGVDSKAAVLILAKKGFPNVMDVSGGLTEWARTVDREFPMY 585
+PG+IG LQA E LK++G+FG PL +L +DG SF ++RLR RS TC CGD PT VL+ + V + + P+ +C+EY +V G HVLLDVR VQ+ +C+L +++N+P +Q++ + +V + + ++ + +PVY ICRRG+DS +A +L K NV+++ GGL +W RT+D EFP+Y
Sbjct: 200 VPGIIGSLQAMEILKIVGQFGEPLSAKLLIFDGLSCSFRSMRLRSRSPTCDVCGDKPTIPNVLTDPTADLIDYNEFCGSCHVELDAKDCPSVSCEEYKSIVDQGDEHVLLDVRELVQYEICSLPNSINIPFAQMKERIGEVFKEIGQTDIDPLFGKPVQPVPVYLICRRGIDSLSAARLLLSKDAKNVINIRGGLLQWHRTIDSEFPLY 408
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Rhodanese (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR13_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.200e-41 Identity = 89/202 (44.06%), Postives = 116/202 (57.43%), Query Frame = 1
Query: 7 GVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQL-------EASMEKVETLSESRSLPVYCICRRGVDSK-AAVLILAKKGFPN-VMDVSGGLTEWARTVDREFPMY 585
GVIG LQA E LKVLG FG+PL GRL TYDG DG+ Y + LRPR C CGD P + +ME S+ + + GL + E +P+ C D A V F++C LD AVNVP + L +A +EK+ L+ PVYC+CRRG+DS+ AA L+ A+ GFP + DV+GGL W VD +FP+Y
Sbjct: 293 GVIGSLQALETLKVLGGFGTPLSGRLSTYDGADGTHYALALRPRRAACEVCGDAPVIKTMEDSRRWCEEQGLGGGACLRLPEDLPSIRCPFATDKCALDANFV---------FSICRLDGAVNVPYAALARAGGGGDAEIEKLRALAGDA--PVYCMCRRGIDSRRAAALLQARGGFPGGIYDVAGGLVRWREDVDPDFPLY 483
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Adenylyltransferase (and sulfurtransferase UBA4 n=3 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJ14_SPIPD) HSP 1 Score: 155 bits (392), Expect = 5.440e-41 Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAF--AAKHGLTVAR-VVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSESRS-------------LPVYCICRRGVDSKAAVLILAKKGFPNVMDVSGGLTEWARTVDREFPMY 585
+PG+IGCLQA E +K+ G+ ++ +D G+F T++LR +S TCA CG NPT+ + F AA T A+ ++P+ ER +TC+EY+ V G H+LLDVR VQF +C+L +++NVPL LE + VE + + LP+Y +CRRG DS+ AV +L + GF D++GGL WA +D +FP Y
Sbjct: 247 VPGIIGCLQALEVIKIASGLGTSFSQKMLLFDATSGAFRTIKLRGQSPTCAICGKNPTITDLIDYVQFCGAAPTDKTPAQTLLPDDER---STCREYSSVRMGAWPHLLLDVRETVQFNICSLPNSLNVPLKDLERRLTDVEQAARQAAALESSAIAIAKDALPIYVVCRRGNDSQVAVQLLRQHGFLQAKDIAGGLERWASEIDPDFPTY 454
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Adenylyltransferase (and sulfurtransferase UBA4 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E610_9FUNG) HSP 1 Score: 152 bits (384), Expect = 7.380e-40 Identity = 79/203 (38.92%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAK---HGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSE-----SRSLPVYCICRRGVDSKAAVLILAKKGFPNVMDVSGGLTEWARTVDREFPMY 585
+PG+IGCLQA E +K+ + G+ +L +D GSF T++LR RS CA CGD PT+ + F R++ E++R+ T +E + H+LLDVR VQ+ +C+L ++N+PL++LE + V + S +LP+Y ICRRG DS+ AV +L K GF DV GGL WAR +D FP Y
Sbjct: 251 VPGIIGCLQALEVVKIAADIGAKFSQKLLIFDATFGSFRTIKLRGRSPACAVCGDEPTITELIDYVQFCGSGPSDKTPTQRILEEVDRI---TVEELGEFRKAAHSHLLLDVREKVQYDICSLPHSLNIPLAELEGRLPDVRAAARHGPNTSGTLPIYVICRRGNDSQLAVQMLQKTGFGQAKDVIGGLETWARDMDSSFPTY 450
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8B2_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.200e-39 Identity = 87/206 (42.23%), Postives = 121/206 (58.74%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGS-KAFAAKHGLTVARVVPEMERVP---TATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSESRSLPVYCICRRGVDSKAAVLILAK-------KGFPNVMDVSGGLTEWARTVDREFPMY 585
+PG+IG LQA EA+KV+ G+ + RL YD QD SF ++ P + CA C T+ SM+ S ++ G +V V+P + + +C +Y V+ G+ HVLLDVRV QF +C+LD +VN+PL +L + +E+VE LS LPVYC+CRRG+ S AV IL K KG +V ++SGGL W VD FP Y
Sbjct: 406 VPGIIGTLQAVEAIKVVTGIGNVMHDRLMMYDSQDCSFLNIKKPPPKRNCAVCSSVATIKSMKDSAESLEQVRGPSVC-VLPVSDGLSPNQNISCDDYNAVLEEGKPHVLLDVRVTRQFEMCSLDGSVNLPLEELVSKLEQVEKLSNGE-LPVYCLCRRGIASAEAVKILQKAKDDDSAKGIHSVYNISGGLNSWVANVDSSFPSY 609
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Adenylyltransferase (and sulfurtransferase MOCS3 homolog n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MSF0_HOMAM) HSP 1 Score: 150 bits (378), Expect = 3.730e-39 Identity = 77/201 (38.31%), Postives = 117/201 (58.21%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQL---EASMEKVETLSESRSLPVYCICRRGVDSKAAVLILAKKGFPN---VMDVSGGLTEWARTVDREFPMY 585
+PG+IGC+QA EA+K++ GSPL +L +DG GSF TVRLR +C CG+ P+++ + + F +R +E+ T +EY +V +VL+DVR+ V+ +C+L + +N+PL+ + E++ ETLS + VYC+CRRG DS+ AV L N + D+ GGLT WA T+D FP+Y
Sbjct: 228 VPGLIGCMQALEAIKIISGLGSPLSQKLLLFDGLQGSFRTVRLRGNKDSCEVCGETPSIVKLIDYEQFCGAPATDKSRNTTLLEKDKRVTVEEYKAIVDAKSPYVLIDVRLPVELEICSLPNCMNIPLTNICKAESTAAIKETLSSLGTKKVYCVCRRGNDSQLAVQQLQSALNHNDYQIKDIIGGLTAWAHTIDSTFPVY 428
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Adenylyltransferase (and sulfurtransferase MOCS3 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVV0_PHATC) HSP 1 Score: 148 bits (374), Expect = 1.190e-38 Identity = 86/203 (42.36%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKA---FAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETLSESRSLPVYCICRRGVDSKAAVLIL--AKKGFPNV---MDVSGGLTEWARTVDREFPMY 585
+PG++G LQATE LKVL G+ + G L Y+ D SF + P+ C CG + T+LSME S A A T+ R P + +C EY+ V H+L+DVR +QF +CAL++AV++PLS L ++++E LS PVYCICRRGVDS A IL AK PN+ +V+GGL W + VD FP Y
Sbjct: 219 VPGLVGILQATETLKVLTGSGTTMKGHLLMYNAMDCSFLKIVKPPKQTKCRVCGPDATILSMEASNASLLHAQGPMQTIDR--PSLPSESNISCIEYSRVREDKVPHILVDVRTKLQFEMCALEEAVHIPLSSLSQQLDQIEKLSGGTK-PVYCICRRGVDSVEATRILDAAKLSHPNIHSAKNVAGGLVSWRKEVDTSFPKY 418
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Os02g0525400 (protein (Fragment) n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0E0T2_ORYSJ) HSP 1 Score: 143 bits (360), Expect = 2.430e-38 Identity = 76/209 (36.36%), Postives = 119/209 (56.94%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAKHGLTVA---RVVPEMERVPTA---TCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEKVETL--------SESRSLPVYCICRRGVDSKAAVLILAKKGFPNVMDVSGGLTEWARTVDREFPMY 585
+PGVIGCLQA EA+KV + G PL GR+ +D V++R S C CG+N + + + + F ++ + P ++ +P + TC+EY +V G RH+LLDVR F + ++ ++N+PLS+LE ++ +ET S + +Y +CRRG DS+ AV +L +KGF + D+ GGL WA+ VD +FP+Y
Sbjct: 33 VPGVIGCLQALEAIKVATDVGEPLSGRMLLFDALSARIRIVKIRGSSTVCTVCGEN-SAFTQDDFQKFDYENFTQSPMSDKSAPSLDILPGSARVTCKEYKRLVDNGERHLLLDVRPAHHFQIASVSQSLNIPLSELEEKLQMLETSLKDTTDASSSDKPPSLYVVCRRGNDSQIAVQLLREKGFLSAKDIIGGLQSWAQDVDPDFPVY 240
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Match: Rhodanese (domain-containing protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A3S2NUS2_ORYJA) HSP 1 Score: 141 bits (356), Expect = 3.280e-37 Identity = 79/212 (37.26%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 1 MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCAACGDNPTVLSMEGSKAFAAKHGLTVARVVPEMERVPTATCQEYADVVAGGRRHVLLDVRVGVQFAVCALDDAVNVPLSQLEASMEK-VETLSESRS-----------LPVYCICRRGVDSKAAVLILAKKGFPNV-----MDVSGGLTEWARTVDREFPMY 585
+PG++GCLQA E LK+ GS +L +D QDG F ++RLRP+ +CA CG++P+V + +AF R + + + T Q+Y ++ HVLLDVR V+ +C+L ++N+PLS LE K ++ L E S PVY IC+ G DS+ AV +L K V D+SGGL WA+T+D FP Y
Sbjct: 77 VPGIMGCLQALEVLKIASGQGSSCGQQLLLFDAQDGRFRSIRLRPKLPSCAVCGESPSVTRLVDYEAFCGSAATDKCRKLNLLSKDQRITVQDYKSIIDRAGPHVLLDVRPLVEVEICSLPFSLNIPLSSLEEKKSKDIQLLQEKISQVKQQMAGDQQAPVYVICKLGNDSQKAVQLLEKMSGEEVDSVTVKDISGGLMAWAKTIDPAFPQY 288 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8754.16937.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8754.16937.1 >prot_Ecto-sp9_F_contig8754.16937.1 ID=prot_Ecto-sp9_F_contig8754.16937.1|Name=mRNA_Ecto-sp9_F_contig8754.16937.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=196bp MPGVIGCLQATEALKVLGEFGSPLVGRLCTYDGQDGSFYTVRLRPRSKTCback to top mRNA from alignment at Ecto-sp9_F_contig8754:109..3148+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig8754.16937.1 ID=mRNA_Ecto-sp9_F_contig8754.16937.1|Name=mRNA_Ecto-sp9_F_contig8754.16937.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3040bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8754:109..3148+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8754:109..3148+ >mRNA_Ecto-sp9_F_contig8754.16937.1 ID=mRNA_Ecto-sp9_F_contig8754.16937.1|Name=mRNA_Ecto-sp9_F_contig8754.16937.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1176bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8754:109..3148+ (Ectocarpus species9 EcSCA_722f female)back to top |