mRNA_Ecto-sp9_F_contig875.16930.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig875.16930.1
Unique NamemRNA_Ecto-sp9_F_contig875.16930.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Aldo_ket_red (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW4_9PHAE)

HSP 1 Score: 845 bits (2184), Expect = 9.650e-307
Identity = 427/446 (95.74%), Postives = 431/446 (96.64%), Query Frame = 3
Query:   75 MSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEEGCAALRRE 1412
            MSWSKVAFGAAKCAKGVVEHETA KTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKD S+TVVSKFGYAAAGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGAT IGAYLVEHPEHHLALKLGLAGGENASAT DGG    PSQ QLDEARGSFYEEMTALFQAMEGQA RGMAYGVSSLGLSLPTWDPMHVSWEKLVECAE+AASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYE ELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGS GVGCTVVEMEQ EKV EG AALR++
Sbjct:    1 MSWSKVAFGAAKCAKGVVEHETALKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDKSLTVVSKFGYAAAGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATEIGAYLVEHPEHHLALKLGLAGGENASATADGGXXXXPSQVQLDEARGSFYEEMTALFQAMEGQAERGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEAELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSPGVGCTVVEMEQPEKVAEGFAALRQD 446          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: EsV-1-7 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R3_ECTSI)

HSP 1 Score: 708 bits (1827), Expect = 7.480e-249
Identity = 357/369 (96.75%), Postives = 360/369 (97.56%), Query Frame = 3
Query:   75 MSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQK 1181
            MSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPGVAHV PGLSHSLHPDFYRHELSASTGR GAT IGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLD ARGSFYEEM ALFQAMEGQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAE+AASRAGRDRHAFKIVQMPA+LLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLP DYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMN QLT FTSLEHYE ELGGSITPMIADKFEALDDDSADLLQ+
Sbjct:    1 MSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPGVAHVVPGLSHSLHPDFYRHELSASTGRFGATEIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDLARGSFYEEMAALFQAMEGQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPASLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPKDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNTQLTKFTSLEHYEAELGGSITPMIADKFEALDDDSADLLQE 369          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Aldo_ket_red (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.310e-81
Identity = 188/466 (40.34%), Postives = 248/466 (53.22%), Query Frame = 3
Query:   78 SWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGY---AAAGS--KLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAME--GQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASR------AGRDRHAFKI--VQMPANLLEVTGL--ATAPAMQKAGLKVMACHPLR-----AATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEEGCAALRR 1409
            +WSK+ FGAAKCA G  E   A + AL GGI VVDT  ++  G+SE +VGE + R   +      S+TVVSK GY    A G+  + PG   + PG+ +SLHPDF   EL +S  RLG      Y+V +PE +++  +     +     G+ G    P  A L +AR   Y  + ALF+ +E    AG    YGV S GLS P  DP+H+  E+++  A  AA R       G D     +  VQ+P NL+E  G+    A     AG++VM   PL      A   +G   +     RG  P DYMDVCREV+ HF    PE REPT+EE E  QGC+F+QQLVQDMN QL +F + EH + EL  +I PMI  KF+ LD  S   LQ F DRYG MV Y+CA+R+RD        P G    A  +    ++LRWL     V   +V M Q   V++  A L+R
Sbjct:    4 TWSKLGFGAAKCA-GSPEQRAALQAALAGGINVVDTGVSFKDGSSERMVGEELRR---APHDLARSVTVVSKVGYWKEPAEGTTKQPPGALRLLPGVMYSLHPDFMARELRSSANRLGRVPS-LYMVHNPESYVSCVVAREQEKLGKQMGEDG---VPDAALLSDAREETYAALDALFEVLEQCSAAGSVGGYGVCSHGLSSPPSDPLHLDVERILAAARAAARRHSEGTGGGADAGVGSLAAVQLPGNLVETLGVEGGAAAXXXAAGVRVMLTRPLSVMLTTAVVSDGLQLISSLDRRGEPPQDYMDVCREVIEHFTYPPPEGREPTQEEIETMQGCQFMQQLVQDMNQQLGSFATYEHLQQELAHAIIPMINAKFDELDATSVKHLQAFLDRYGDMVTYNCAERLRDAILAAH--PDGGMEPAPGDTWAQHSLRWLQARPHVDTVLVGMHQPRYVQDALAVLQR 459          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E258_9STRA)

HSP 1 Score: 255 bits (651), Expect = 2.010e-75
Identity = 163/432 (37.73%), Postives = 239/432 (55.32%), Query Frame = 3
Query:  135 ETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAA-AGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGM--AYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGL-----PTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEEGCAALR 1406
            E A + +L GGITV+DTSA+Y GG+SE ++G+ ++        +D  +TVVSKFG+   +GS  P  +     L H +HPDF   ELS S  RL    +   LVE PE  +  ++       AS   D      P+QA L EAR     E+   F+A+E     G+   +GVS   L L   DPMH+ W  ++  A +AA  AG+ R +F+ ++   N++E TG+  A      GL+VM+C PL    P+   +     L+  L     PT Y++VC + L HF+ E+P+  +P+ E+ E+ + CR+LQ L+QD+N QL  F S+E Y+ EL G IT M+  KFEALD+DSA+LL  FF +YG MVRY CA + R   T+   C SG H +    PLQ +AL W +   G+    + M   ++V++  A ++
Sbjct:    1 EAALRKSLLGGITVIDTSASYGGGDSERMIGKVLEGLRDDLPARDR-LTVVSKFGFCLDSGSTNP--SDTGRTLEHCIHPDFMHEELSKSLKRLRTGHLDVLLVESPEEMVRKRV-------ASVLADPPLGMDPAQA-LAEAREPLLVELKRTFEALEQTVSSGLIGGFGVSCDALVLDESDPMHLPWRDIMAIANDAARSAGKARSSFQTLRFAVNVMESTGVTVAQEAALHGLRVMSCRPLTIIEPDNTADPAAPPLQRRLTSSPDPTGYLEVCAQALEHFHHEVPDSSQPSAEDIELVEACRWLQILIQDLNRQLPLFRSVEEYQRELVG-ITQMLEGKFEALDEDSAELLHTFFQKYGDMVRYHCAAQTRAFLTSPL-CSSGPHSIKPDTPLQHFALEWALKQSGIAHVSLGMTHEDQVDDALAIVK 419          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKZ0_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.020e-72
Identity = 159/436 (36.47%), Postives = 235/436 (53.90%), Query Frame = 3
Query:  129 EHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAA--AGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGM--AYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRA--ATPEGKFELVDDALRGGL--PTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEEGCAALRRE 1412
            +H    + A+  G+ V+DT+A+Y  G+SE L+G+     L+       S+ ++SKFGY A  +G  +PG  HV+PGL H+L P+F+R EL  S  RLG   +  +LV+ PE  +  ++     +   A GD       +   LD  R    + +   F  +EG    G+  +YGV S  L L   DP+H+ W  L+  + E        RH    +Q P N+LE  G++ A      GL+V +  PL A  A+P   ++ + D    G   P  YM VC+E L  F  ++P DR+PT +E E+ Q CR++Q L+QDMN QL  F S+  +E EL  SI PM+ DKFE LD DSA LLQ FF+++  MVRY CA  +R    + E CPSGAH L ++E LQ  AL W++   G+   V+ +  +  V++    + R+
Sbjct:   19 QHGEVLRRAVVQGVQVIDTAASYGAGSSEALIGQ----VLSELPDLAPSVKIISKFGYFAEDSGRAVPGSVHVSPGLRHALGPEFHREELRRSLERLGRDRLDVWLVDSPEEAIRSEV-----QRIFAGGDA------TPEALDSTRTRLLDTLHETFSVLEGAVAEGLIGSYGVHSPALVLAEEDPLHLRWRDLLAVSGEHL------RH----LQFPVNVLEPHGVSVAQEAALFGLQVGSTRPLTALLASPVQTWQRIADLAEDGSRPPEGYMQVCQEALDRFRFDLPTDRDPTPDEVELFQACRWIQTLIQDMNQQLVQFGSVAQFEQELKESILPMLNDKFEELDADSAALLQAFFEQFHAMVRYHCAVEMRKRVES-EACPSGAHHLGENESLQHRALSWVLEQPGIATVVLGVTASAHVDQALEIMARQ 428          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Aldo_ket_red (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPH7_9STRA)

HSP 1 Score: 231 bits (589), Expect = 8.250e-66
Identity = 171/459 (37.25%), Postives = 232/459 (50.54%), Query Frame = 3
Query:   87 KVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANY-MGGNSELLVGEGVDRWLASGEGKDTS-ITVVSKFGY-------AAAGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLA-LKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGMA---YGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDA-LRGGLPTDYMDVCREVLHHFN----LEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGAHLLADS-----EPLQIYALRWLMGSLG--VGCTVVEMEQAEKVEE 1388
            ++ FG A+    +  H  A   A++ GI V DT+ NY   G SE  VG+ +          D   IT+ SKFGY       A     +P       GL +SLHP+   HEL  S  RL    +    V +PEH LA + L    GE + +           QA L E +    E +   F+A+EG  G G     YGVSS G +L + + +H+S   +++ A E A RAG++  + K +Q+P NLLE  G+  A   ++ GL+V A  PL A +  G + LV+ A L G  P  YM+ CR  L  FN     E   ++E TEEE E R+GCR +Q L++DMN QLT+FTS E Y  EL   I PMIA  FE+LD+D+AD LQ FF +YG+MVRY  A R        E C +  H+L        E L  YALRW +  +   +   +V M   E V E
Sbjct:    9 RIGFGCARITPSL-PHLKALTAAIQHGIRVFDTAPNYGHAGASERAVGQALATHFQGTNDLDRDDITICSKFGYYRPVEGHAPGPDSVPVGNKEEGGLYYSLHPEVMEHELKGSLARLQVDALDILYVHNPEHVLADIVLRHETGETSFSD------DASLQAALREEKQKMRERLVHTFEALEGVVGSGRVRKGYGVSSNGFALSSKEGLHLSLAMVLDAAAEGARRAGKETPSLKAIQLPLNLLEPGGVVVAAQAREKGLEVFANRPLTAVSQGGLYRLVNKAALSGEPPGGYMEACRTALEVFNPTSLFEGRAEKELTEEELETREGCRIIQDLIRDMNRQLTSFTSTETYTQELERRIIPMIASTFESLDEDAADALQAFFVKYGEMVRYHAAMRAV------EACKAAGHVLGGGVGKAGEALHEYALRWSLDKVPRQLSGVLVGMPSEEYVHE 454          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Aldo/keto (reductase n=2 Tax=Sulfurimonas TaxID=202746 RepID=A0A5P8NKZ7_9PROT)

HSP 1 Score: 134 bits (338), Expect = 8.350e-31
Identity = 127/462 (27.49%), Postives = 200/462 (43.29%), Query Frame = 3
Query:   84 SKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPG-------------VAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHL--ALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGM--AYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEIPEDREPTEEEEEIRQGC-----RFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFD----RYGKMVRYSCAQRVRD-MATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEE 1388
            S  AFG  + +    +H  A K A++ GIT++DTS+NYM G +E  +      +    E K   I VVSKFGY   G+ L               +   +    HS+   F R EL AS  RL    I  YL+ +PE+++  A+  G++  E                 +LDE     Y  +   F  +E +   G   +YG+SS   SL   D   + +E L+  AE AA  AG   H+F  +++P N+LE  GL  A   +K+GL+V+A  PL A      F L D            D  R+  HH N              E+ + C     R L  L++ ++A    +  +  Y+V L   I P +    E +D+++++ +  F D     Y KMV + C+++ R+ +    + C S          +Q  A+R+LM    +   +V M +   + E
Sbjct:    2 SNFAFGTYRISDINPQHIQALKEAIESGITMIDTSSNYMDGGAERAI---ATAFRELDEDKRDEIEVVSKFGYIQ-GANLKAYKENPSTIRNSDEIVKYSEECYHSISKSFMRDELKASLERLEMQKIDCYLIHNPEYYIFDAINRGISKDE-----------------RLDE----MYRRVQNAFVGLEEEVKSGTIGSYGISSNSFSLEQSDDEFLPYEDLITLAENAAEIAGNKTHSFTTIELPINILEREGLKCASWAKKSGLRVLANRPLNAKYNNMMFRLAD-----------YDESRDYYHHLN--------------ELMEVCDNEKLRPLYNLLEQLDATKHKYGWIGDYDVFLFTQIIPHLKKTLEKVDEENSETMLIFIDLFLTEYRKMVAFECSKKTREQLKEFFKECNS---------TMQECAIRFLMQQESIDYILVGMRRPTYIHE 404          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Aldo/keto (reductase n=1 Tax=Sulfurimonas crateris TaxID=2574727 RepID=A0A4U2ZA03_9PROT)

HSP 1 Score: 134 bits (337), Expect = 1.070e-30
Identity = 117/403 (29.03%), Postives = 182/403 (45.16%), Query Frame = 3
Query:   84 SKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPG---------VAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHL--ALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQ--AGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFN--LEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFD----RYGKMVRYSCAQRVR 1235
            S  AFG  + +    +H  A K A++ GIT++DTS+NYM G +E  +   +  +    E K   + +VSKFGY   GS L           V   +    HS+   F   +LSAS  RL    IG YL+ +PE+++  A+  G                  P   +LDE     Y+ +   F  +E +  +GR  +YG+SS   SLP      + +E L+  A  AA   G   H+F  +++P NLLE  GL  A   ++ GL+V+A  PL A   E  F L D            D  ++   +FN  +E+ ++           +    L  L++ ++A    F  +  Y+V L   I P I    + +D++++  L +F D     Y KMV Y C++R R
Sbjct:    2 SNFAFGTYRISDINPQHIEALKEAIESGITMIDTSSNYMDGGAERAIAVALREF---DEDKKDEVEIVSKFGYIQ-GSNLKEYKENPSEDEVVKYSEECYHSISKSFMHEQLSASLERLEMEKIGCYLIHNPEYYILDAINRGT-----------------PKDERLDE----MYKRLQEAFVGLEEEVKSGRIGSYGISSNSFSLPHTSDEFLPYEDLLTLAYNAAMIVGNRTHSFATIELPINLLEREGLKCASWAKENGLRVLANRPLNAKHNEMMFRLAD-----------YDESKDYYTYFNELMEVSDN-----------EALEPLYNLLEQLDATKHKFGWIGDYDVFLFAQIIPHIKKVLQKIDEENSKTLVEFIDLYLGEYRKMVAYECSKRTR 357          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: Oxidoreductase (n=1 Tax=Sulfurimonas sp. TaxID=2022749 RepID=A0A2G2AXC3_9PROT)

HSP 1 Score: 133 bits (335), Expect = 1.950e-30
Identity = 120/451 (26.61%), Postives = 202/451 (44.79%), Query Frame = 3
Query:   84 SKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYA-----AAGSKLP--GVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHL--ALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFN--LEIPEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITPMIADKFEALDDDSADLLQKFFD----RYGKMVRYSCAQRVRD-MATTGEGCPSGAHLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEE 1388
            S  AFG  + ++   +H  A K A++ GIT++DTS+NYM G++E  +   ++ +    E    S+ +VSKFGY      A   + P   V   +    H +   F   +L  S  RL  + I  YL+ +PE++L  A+K G+                 P   +LDE     ++   AL  A+  Q G   +YG+SS   S    D   + +E L+  A +A    G DRH+F  +Q+P N+LE  GL  A   ++ GL+V+   PL A      + L +            D  +E  +HFN  +EI ++            G  F   L+++++     F  +  Y+  L  SI P +    E LDD++ + +  + D     Y KMV Y C+++ ++ +    E C         + P+Q  A+ +L+    +   ++ M +   V+E
Sbjct:    2 SNFAFGTYRISEHNPQHIQALKLAIESGITMIDTSSNYMDGSAERAIAIALNHF---DEDVRESVEIVSKFGYIQNENMARHKENPFDEVVEYSENCFHCISQSFIEDQLGKSLSRLEVSSIDCYLIHNPEYYLLDAIKRGV-----------------PKDERLDEMYKRLFDAFLALELAV--QNGNIKSYGISSNSFSKLVSDEEFLPYEDLLALAGDACEEIGNDRHSFTTIQLPINMLETNGLKCASWAKENGLRVLVNRPLNAQLNGIMYRLAE-----------YDESKEYYNHFNELMEICDNE---------TLGAMFT--LLEELDDNKYKFAWIGDYDNFLYASILPHMRKSLEQLDDENKETILGYIDLFLIEYRKMVAYECSKKTKETLKELFEDC---------ALPIQECAINFLLDRXTIDYILIGMRKPRYVDE 399          
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Match: DUF255 (domain-containing protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532ENI5_9BACT)

HSP 1 Score: 128 bits (321), Expect = 3.500e-27
Identity = 100/321 (31.15%), Postives = 142/321 (44.24%), Query Frame = 3
Query:   69 SGMSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSITVVSKFGYAA------------AGSKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDEARGSFYEEMTALFQAMEGQ--AGRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLA-----------TAPAMQKAGLKVMACHPLRAATPE--GKFELVDDALRGGLPTDYMDVCREV 950
            SG++ S++ FG  +      EH  A K AL+ G+ ++DTS NYM G+SE LVG  +   + +GE     + VVSK GY              AG   P +     G+ H LHP+F   +L+ S  RLG   +   L+ +PE++L+      GG+                  L   R SFY  +   F  +E Q  AGR   YGVSS  ++    D    S  +L + A  AA+  G+ RH F ++Q P NL E   L               A Q+ G+ V+   PL A   +  G   L D  + G  P D+   CR V
Sbjct:  745 SGLTTSRLGFGTYRVDTREPEHREALKKALREGVNLIDTSTNYMDGDSERLVGAVLGELIKTGELIREEVVVVSKIGYVQGDNLKQAEAREQAGRPYPDMVKYGEGIWHCLHPEFLNDQLTLSLDRLGLATLDVCLLHNPEYYLSEATHHEGGD------------------LTMVRESFYRRIEQAFAFLESQVTAGRIRYYGVSSNTVTAHASDAEATSLSRLCDSARAAAAAQGKGRHHFAVLQCPMNLYEAGALVRPNAGVDQRETVVEAAQREGIAVLVNRPLNAMPTKKSGVLRLADFPIDGD-PVDFDQQCRTV 1046          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig875.16930.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Aldo_ket_red9.650e-30795.74domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
EsV-1-77.480e-24996.75n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Aldo_ket_red1.310e-8140.34domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical2.010e-7537.73protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical2.020e-7236.47protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Aldo_ket_red8.250e-6637.25domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Aldo/keto8.350e-3127.49reductase n=2 Tax=Sulfurimonas TaxID=202746 RepID=... [more]
Aldo/keto1.070e-3029.03reductase n=1 Tax=Sulfurimonas crateris TaxID=2574... [more]
Oxidoreductase1.950e-3026.61n=1 Tax=Sulfurimonas sp. TaxID=2022749 RepID=A0A2G... [more]
DUF2553.500e-2731.15domain-containing protein n=1 Tax=Nitrospira sp. T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig875contigEcto-sp9_F_contig875:1883..7302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score711.8
Seed ortholog evalue2e-202
Seed eggNOG ortholog2880.D7G6R3
EggNOG OGs2E5ZQ@1,2SCRD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-7
Ec32 orthologEc-26_000410.1
Exons8
Model size1741
Cds size1341
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig875.16930.1prot_Ecto-sp9_F_contig875.16930.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig875 2209..7228 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930922.4480085-UTR-Ecto-sp9_F_contig875:1882..22081622930922.4480085-UTR-Ecto-sp9_F_contig875:1882..2208Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig875 1883..2208 -
1692278950.1719258-UTR-Ecto-sp9_F_contig875:1882..22081692278950.1719258-UTR-Ecto-sp9_F_contig875:1882..2208Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig875 1883..2208 -
1622930922.624483-UTR-Ecto-sp9_F_contig875:7228..73021622930922.624483-UTR-Ecto-sp9_F_contig875:7228..7302Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig875 7229..7302 -
1692278950.287012-UTR-Ecto-sp9_F_contig875:7228..73021692278950.287012-UTR-Ecto-sp9_F_contig875:7228..7302Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig875 7229..7302 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930922.4626596-CDS-Ecto-sp9_F_contig875:2208..24451622930922.4626596-CDS-Ecto-sp9_F_contig875:2208..2445Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 2209..2445 -
1692278950.1864264-CDS-Ecto-sp9_F_contig875:2208..24451692278950.1864264-CDS-Ecto-sp9_F_contig875:2208..2445Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 2209..2445 -
1622930922.4803617-CDS-Ecto-sp9_F_contig875:2900..30591622930922.4803617-CDS-Ecto-sp9_F_contig875:2900..3059Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 2901..3059 -
1692278950.1989498-CDS-Ecto-sp9_F_contig875:2900..30591692278950.1989498-CDS-Ecto-sp9_F_contig875:2900..3059Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 2901..3059 -
1622930922.5255013-CDS-Ecto-sp9_F_contig875:3465..35411622930922.5255013-CDS-Ecto-sp9_F_contig875:3465..3541Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 3466..3541 -
1692278950.212805-CDS-Ecto-sp9_F_contig875:3465..35411692278950.212805-CDS-Ecto-sp9_F_contig875:3465..3541Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 3466..3541 -
1622930922.5440633-CDS-Ecto-sp9_F_contig875:3997..41041622930922.5440633-CDS-Ecto-sp9_F_contig875:3997..4104Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 3998..4104 -
1692278950.2269108-CDS-Ecto-sp9_F_contig875:3997..41041692278950.2269108-CDS-Ecto-sp9_F_contig875:3997..4104Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 3998..4104 -
1622930922.5597534-CDS-Ecto-sp9_F_contig875:4547..46381622930922.5597534-CDS-Ecto-sp9_F_contig875:4547..4638Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 4548..4638 -
1692278950.2403417-CDS-Ecto-sp9_F_contig875:4547..46381692278950.2403417-CDS-Ecto-sp9_F_contig875:4547..4638Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 4548..4638 -
1622930922.574699-CDS-Ecto-sp9_F_contig875:5337..57741622930922.574699-CDS-Ecto-sp9_F_contig875:5337..5774Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 5338..5774 -
1692278950.2507417-CDS-Ecto-sp9_F_contig875:5337..57741692278950.2507417-CDS-Ecto-sp9_F_contig875:5337..5774Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 5338..5774 -
1622930922.5892472-CDS-Ecto-sp9_F_contig875:6421..65551622930922.5892472-CDS-Ecto-sp9_F_contig875:6421..6555Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 6422..6555 -
1692278950.2674105-CDS-Ecto-sp9_F_contig875:6421..65551692278950.2674105-CDS-Ecto-sp9_F_contig875:6421..6555Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 6422..6555 -
1622930922.608974-CDS-Ecto-sp9_F_contig875:7128..72281622930922.608974-CDS-Ecto-sp9_F_contig875:7128..7228Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 7129..7228 -
1692278950.2776434-CDS-Ecto-sp9_F_contig875:7128..72281692278950.2776434-CDS-Ecto-sp9_F_contig875:7128..7228Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig875 7129..7228 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig875.16930.1

>prot_Ecto-sp9_F_contig875.16930.1 ID=prot_Ecto-sp9_F_contig875.16930.1|Name=mRNA_Ecto-sp9_F_contig875.16930.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=447bp
MSWSKVAFGAAKCAKGVVEHETAFKTALKGGITVVDTSANYMGGNSELLV
GEGVDRWLASGEGKDTSITVVSKFGYAAAGSKLPGVAHVAPGLSHSLHPD
FYRHELSASTGRLGATGIGAYLVEHPEHHLALKLGLAGGENASATGDGGG
PSPPSQAQLDEARGSFYEEMTALFQAMEGQAGRGMAYGVSSLGLSLPTWD
PMHVSWEKLVECAEEAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQK
AGLKVMACHPLRAATPEGKFELVDDALRGGLPTDYMDVCREVLHHFNLEI
PEDREPTEEEEEIRQGCRFLQQLVQDMNAQLTTFTSLEHYEVELGGSITP
MIADKFEALDDDSADLLQKFFDRYGKMVRYSCAQRVRDMATTGEGCPSGA
HLLADSEPLQIYALRWLMGSLGVGCTVVEMEQAEKVEEGCAALRRE*
back to top

mRNA from alignment at Ecto-sp9_F_contig875:1883..7302-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig875.16930.1 ID=mRNA_Ecto-sp9_F_contig875.16930.1|Name=mRNA_Ecto-sp9_F_contig875.16930.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5420bp|location=Sequence derived from alignment at Ecto-sp9_F_contig875:1883..7302- (Ectocarpus species9 EcSCA_722f female)
CTCGACTGCTAGCTCTGCCGCACGTGCGACGCAGTGCACGAAGGTGCCAC CTGCGGTGAGCTACAAAGTCAGGGATGTCATGGTCGAAGGTCGCTTTCGG GGCGGCGAAGTGTGCGAAGGGTGTCGTGGAGCATGAAACGGCTTTCAAGA CAGCTCTAAAGGGAGGCATCACGGGTAGGTGACACCTATTGGTACTACAT GTACCAGTATGCTTAAGCAACTTGTCTTTGTTTGCCCCGCCGCTGGCTCT CCTGTCGTTCTCTTCTTGTTGTACTGGTACACTACCCCTAAGCATGTTCA GCAGCAGCGGTAGTACAGCAGTGCAAGTGTCCTTTGGGCTACATGCACGA TTGGCCACTGCGCTCGACTACTGCTGTACCATGTGTACCAAGCTGCCATG CACACATTCGTTTTACAGTTTATCATTAACACCAGGGCACCAGGGCACAC AGCAGTAGTGCGGTCTGTCTATCCGCTACAATTGATTAGTACAGCCTTCG TATTGCCCGCCCCGCTCACCATGTCCGCCTGGTGTGCTAGTCTTTATCGA CGTCTTTTCCGTGACACACATGTGTTGAACGATGTGGCGCTTTGTTCTTA CATTTGACCCGCTATTTGTAGGTTTAGACCTACTTTTTGTACCTTGGGTG GCAAGGGTAATAGTCTACAGCGGCAGTTTGCCGCTGACTTGACTGCGAGC CTTATGTTTCCTCTGCTTCCCCGGTGTGTCCCTTGTATCTCGTGTAGTCG TCGACACCAGCGCGAATTACATGGGCGGAAACAGCGAGCTCTTGGTGGGT GAGGGGGTCGACCGGTGGCTGGCCTCTGGCGAAGGCAAAGACACGAGCAT AACGGTGGTGTCCAAGTTCGGCTACGCCGCGGTAAGCTTGGGAGGTCAAT TTACGGTCTGTTATTTACTCCATTGGTCCGAGAGGTCCCAAGAGGTCTAA CCTAGCGGCCGCGACCTGCTGTGCTAAAACGCGGCTGCACCGCTTCTTCG GAATGCGGAATGGGGAGAGGGCGCTGGAGAGGAATCGACCGCCCGAACCA ACGCTCGACCAATCAGAGGGCGTAAAAGCCAGTAGATGGGAAGAGTCATT ATTATATCAGACCGTAAAACTCTACTGTACTGAAGCTTGGGTGACGGCTG GCCCGCATGTGTTTGAGGGGACGGTGGAACACCACGAAGCCGCCGTACCG AAAGCTTCTCATTGCCCGCACGAGCAAGGGGCTGGGTACGCTCTGTTGGT TGGTTGTTGCATCACGAGGTTAGAAGGGCGGGGTGCGAGGTAAGCACAGC AGTACAGGCATGATTTGAATCCGTTGTGCCGAGTGCATAAGTTGCCATCG CGGCGAAATAAATGCTCGGTGTTCACCACCACACTAAAACTAGTATGTCA CCTTCAACACGTTGTTGCCACACAGCAGTACCGGCATGGCAGTGTCCCCT TTGACGTGTATGTACCTTCACCAGACCTCGATAAGATGACCCTGGGTTTT TCGAAACTATTATTACCTCATCGAACAGGCGGGCTCGAAACTCCCAGGAG TAGCGCACGTCGCGCCCGGTCTCTCCCACTCCCTCCACCCAGATTTCTAT CGACACGAGCTGTCGGCTTCCACCGGTCGCTTGGGGGCCACCGGGATAGG CGCGTACCTCGTGGAGCACCCGGAGCACCACCTCGCCCTCAAGCTGGGAC TCGCCGGCGGCGAGAACGCCTCCGCGACCGGGGACGGTGGCGGTCCGTCC CCGCCCAGCCAGGCCCAGCTAGACGAAGCTCGGGGCTCGTTCTACGAGGA GATGACGGCCTTGTTTCAGGCGATGGAGGGGCAAGCAGGGAGAGGGATGG CGTACGGGGTGAGCTCGTTGGGCCTGTCGCTACCGACGTGGGACCCGATG CACGTGTCGTGGGAGAAGCTGGTGGAGTGCGCGGAGGAGGCGGCTTCCAG GGCTGGGCGGGACCGGTGAGGGGGGCTTCCCTGAGCGGACGGGACTTTTG CGGGCCTTGTCCGGTGCTTGAAGGCAGGCGGCGCCGTGCCGCTGCCATCG ACATCCTTGTAGGTCTAGTTGCTGCTGTTGAGCGATGAAATTGGGCGTTG TGTTTTCACGCTGGAGGTTTGTGGTTCCGTTTTGAATTTTTGTGCAGGGT ACCAAGGGAAGGTTATTTCTGATCGGTTAAAAACGCTTACGACGGTTTTT TTTCTGACATGAACGAGGACCCTTGGGCTACGGTGGGGGCTGTCCACGGT CAATCGGTTAGACAAAATGTTGGGCATTTCACGGAGACGTGGTTTCGTTC AGCGATGAAGTTTCAAGGCGTCTGTCTGCACGGAGATGCGTGACCGACTG CTCCCTTTGAACATGTGGAGCATCTCGACGAGAACCTTTGTTGTGCGTCT TCGACTGTCATCGGTGCAGCAACTGGTGGTGCCACCGTTTCATTTTGCAC ATACGTGCCCGAATGTCATGTTTCTGGTGATGTTCGTAACGTACAACTAA ACCATGAATTTGCAAAGACGACGTTGGCTCTAATGATATTCTCGCTACAA GGTGGCCGTACGTGTGCCAATGTTTAGTCAGTTCACCGTTATTGGCGCAC GAGTCCGTTATCGTTCACGTTTTTGACGGTGAGTCTGTTGTGTACCGGTT GTCGTGTCATGCAGGCACGCCTTCAAGATCGTGCAGATGCCCGCTAACCT GCTTGAGGTCACTGGGCTTGCCACGGCTCCGGCGATGCAGAAGGCTGGTC TGAAGGTGACTTTTCGTGTTCGGTTTTACTCCTCTGTCCCGTAGCTTGTA TTTTTTTAGCTGTGCTCTCGCGCGCTGTGTTTCACCAGAAAGGACCGTGG GGCGCCATGTGCAAATGCGTTCCCTGTGATGGGTATCATGTGATCATGTG AGGTCAATGCTCCAAGGGCCCGCTACACAGCTGGCCTGTGCATGTGATAC CTTCTCTGAGATCCTTTATATCTCTCGGCCTACCCACGAGTTGCACTCAT GCGCATGAGTCGGTGGACGTGTACGATGGAAACAAGTGTATCTTCGTCCG CGGCAATTGGACGTATCCACCGACGCGGTGGAGAGCAGTCAAGATCACTT GACGGCGCGAAATCGATTTCAAGTCAGTTGCTGATGCGCACCTCTTTTGC GCGACTCGGCCCACCTGCTTTCCTACGGCCGCCGTTGTCCATGCTCAGGT CATGGCATGCCACCCGCTTAGGGCGGCCACACCGGAAGGCAAGTTCGAGC TAGTGGACGACGCGCTGAGAGGAGGTCTGCCGACGGATTACATGGACGTG TGCAGGTGGGGGGCTCGGCGCTCGGGTGTTTTGTGTGATGTTTTCACGTG CCCCCATCTAGAGATCGCCGATGAAACCGCTTTGTGACCCCTGGAGGTGA CGCTCCGGCGTAGAAGTTTGTTGGTCTGTACGGGGGACGGGGGACAGGAA GACTGGAACTGCGTGCGTGCGGGGGGGGGTCGTAGAGAGGGGTGCTGCTG GTGTTGGGCTGGTTGCGCTTCGCATGCGCCTCTTGTGGCTTCCATTTCAC TGTTTCTCACTTTGGCAATGTTGGGGATCCTTTCTTTGTCTGTTTGTGCA CGCGATCTCGAGTTGCCCAACAGTGGTTGTCGGCGTAAGAGCTACGCGAG ATACGACACTTGCGGTCTCTTTGCAGCTGCATGTAGTGACAATGGGAGTA CTCTTCCTCAGACATTACCTTGCAACGTCATGTTCGTCGTGTGCATTTCT TGGCGTGGCAGAGAGGTGCTGCATCACTTCAACCTAGAGATCCCCGAGGA CCGAGAGCCCACGGAAGAAGAGGAAGAAATTAGACAGGTACACTCCGTCA TCGAAGCAGGGTGCACGCTGGTAGCGCACGCAGGTTTGCAATGCGGTGCA GCGCCCCGCGCGCTGTGATGCTGCGGACGCCAGTGCCTATAACAGCCGAA ATCAAACCTAGAGAGCTAGTCTAGCGGTTGATTTCGGATTTCATGTGTCT CATACTTCTATTTATCGCGCATAGACCTTGCAGCCGCACGCGCTGTTCGT CAGGGTAAGTGCGAACGAGCTGTGCTAACACTCCACAAGGAAACCCATGG CGCAATACTCCTAAGATTGTCCGCCACCACCCGCCCCCAAGAACCACATT ACTTTCCCACCTGTCCCTGGGGAGACAGACGCGTCACTGCTATCAGTTTG TTTCTTCACTTTGCGGTGTCGGTGGTGGAACGTTGCGCGGCAGGGGTGTC GTTTCCTTCAGCAGCTCGTGCAGGATATGAACGCGCAGCTCACGACTTTC ACCTCCCTGGAACACTACGAGGTGGAGCTAGGGGGAAGCATTACCCCCAT GATAGCAGACAAGTTCGAGGCCCTCGACGACGACTCGGCAGATCTGTTAC AGGTGAAGCAAAGTGAACACTTTGGTTGTATCGTTTTGTGCGGTCATCAT TTGCTGGTAGGTCTGGAAAGAAGAGTTGGCAATAAGTTAGTATTTCCGTC GTCTTAGCACATGCAGCGATTGGCTTTGGTCGGTCTGTCGCCCCCTGGTA GACTGTTTGCGCAAAGGAGGTGCAGGACATTTGTCGGTTAGAGAATTTAT GCGCGAAGAAAGCAACAACAAGAATGATCCAGTGTGCTTCTTGCCTGCAA CGATCCCCCGTGATAAATGGGCTTGCACAATGTCACGCGTGTGCATGGAA GAAGGATGTACGAACCAAATCCCAAGCTTGGACTAGGTGGTACCGCCGCC ATTTCCGGTGCACTTGCTTCCAGGCCGTGCAAAGTCAGTGGCATGTCCTA GCTCGCGCTTCAATCCCCCCCTCGCCTTTTGCCTTCGGCTGTATGACCCA CTGCCAGAAATTTTTCGATCGCTACGGGAAAATGGTGCGATACAGCTGCG CGCAGAGAGTGCGAGATATGGCGACGACTGGGGAAGGCTGTCCAAGTGGG GCCCATTTGTTGGCTGATTCGGAGCCCCTCCAAATTTACGCTCTTCGCTG GTTGATGGGTAGCCTGGGGGTAGGCTGCACGGTGGTGGAGATGGAGCAGG CAGAAAAAGTTGAAGAGGGGTGTGCAGCTCTGCGTCGAGAATAACCAACG GTGGACATCTACCCTTTGATGTGTGTGTTTTCTCTTCTCTCTGGCGAAGT GGATTTGTTCGGGATTGCACTGCCTTTTTTTGACGAATCAGAAATGGACA GCGGACGAGCGATTGCTGCGACTGAACAAGTTACATCAAGTTGAGACAGA GGCACTCCTGGATGGTGACGGGATCTCCGAAGGTCACATTTTTAGTGCCG GCACTGTTTTTCTTTCGACGGGGCTGGGTGGTTTCTGGTTCTTGCCGCGA TCAAGCCGAAGCCTCCAATATCTTCTCCGTCATTTATCAATGAATTGGAA CCTGGGCCCCCCACCGACAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig875:1883..7302-

>mRNA_Ecto-sp9_F_contig875.16930.1 ID=mRNA_Ecto-sp9_F_contig875.16930.1|Name=mRNA_Ecto-sp9_F_contig875.16930.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2682bp|location=Sequence derived from alignment at Ecto-sp9_F_contig875:1883..7302- (Ectocarpus species9 EcSCA_722f female)
ATGTCATGGTCGAAGGTCGCTTTCGGGGCGGCGAAGTGTGCGAAGGGTGT
CGTGGAGCATGAAACGGCTTTCAAGACAGCTCTAAAGGGAGGCATCACGG
ATGTCATGGTCGAAGGTCGCTTTCGGGGCGGCGAAGTGTGCGAAGGGTGT
CGTGGAGCATGAAACGGCTTTCAAGACAGCTCTAAAGGGAGGCATCACGG
TCGTCGACACCAGCGCGAATTACATGGGCGGAAACAGCGAGCTCTTGGTG
GGTGAGGGGGTCGACCGGTGGCTGGCCTCTGGCGAAGGCAAAGACACGAG
CATAACGGTGGTGTCCAAGTTCGGCTACGCCGCGTCGTCGACACCAGCGC
GAATTACATGGGCGGAAACAGCGAGCTCTTGGTGGGTGAGGGGGTCGACC
GGTGGCTGGCCTCTGGCGAAGGCAAAGACACGAGCATAACGGTGGTGTCC
AAGTTCGGCTACGCCGCGGCGGGCTCGAAACTCCCAGGAGTAGCGCACGT
CGCGCCCGGTCTCTCCCACTCCCTCCACCCAGATTTCTATCGACACGAGC
TGTCGGCTTCCACCGGTCGCTTGGGGGCCACCGGGATAGGCGCGTACCTC
GTGGAGCACCCGGAGCACCACCTCGCCCTCAAGCTGGGACTCGCCGGCGG
CGAGAACGCCTCCGCGACCGGGGACGGTGGCGGTCCGTCCCCGCCCAGCC
AGGCCCAGCTAGACGAAGCTCGGGGCTCGTTCTACGAGGAGATGACGGCC
TTGTTTCAGGCGATGGAGGGGCAAGCAGGGAGAGGGATGGCGTACGGGGT
GAGCTCGTTGGGCCTGTCGCTACCGACGTGGGACCCGATGCACGTGTCGT
GGGAGAAGCTGGTGGAGTGCGCGGAGGAGGCGGCTTCCAGGGCTGGGCGG
GACCGGCGGGCTCGAAACTCCCAGGAGTAGCGCACGTCGCGCCCGGTCTC
TCCCACTCCCTCCACCCAGATTTCTATCGACACGAGCTGTCGGCTTCCAC
CGGTCGCTTGGGGGCCACCGGGATAGGCGCGTACCTCGTGGAGCACCCGG
AGCACCACCTCGCCCTCAAGCTGGGACTCGCCGGCGGCGAGAACGCCTCC
GCGACCGGGGACGGTGGCGGTCCGTCCCCGCCCAGCCAGGCCCAGCTAGA
CGAAGCTCGGGGCTCGTTCTACGAGGAGATGACGGCCTTGTTTCAGGCGA
TGGAGGGGCAAGCAGGGAGAGGGATGGCGTACGGGGTGAGCTCGTTGGGC
CTGTCGCTACCGACGTGGGACCCGATGCACGTGTCGTGGGAGAAGCTGGT
GGAGTGCGCGGAGGAGGCGGCTTCCAGGGCTGGGCGGGACCGGCACGCCT
TCAAGATCGTGCAGATGCCCGCTAACCTGCTTGAGGTCACTGGGCTTGCC
ACGGCTCCGGCGATGCAGAAGGCTGGTCTGAAGGCACGCCTTCAAGATCG
TGCAGATGCCCGCTAACCTGCTTGAGGTCACTGGGCTTGCCACGGCTCCG
GCGATGCAGAAGGCTGGTCTGAAGGTCATGGCATGCCACCCGCTTAGGGC
GGCCACACCGGAAGGCAAGTTCGAGCTAGTGGACGACGCGCTGAGAGGAG
GTCTGCCGACGGATTACATGGACGTGTGCAGGTCATGGCATGCCACCCGC
TTAGGGCGGCCACACCGGAAGGCAAGTTCGAGCTAGTGGACGACGCGCTG
AGAGGAGGTCTGCCGACGGATTACATGGACGTGTGCAGAGAGGTGCTGCA
TCACTTCAACCTAGAGATCCCCGAGGACCGAGAGCCCACGGAAGAAGAGG
AAGAAATTAGACAGAGAGGTGCTGCATCACTTCAACCTAGAGATCCCCGA
GGACCGAGAGCCCACGGAAGAAGAGGAAGAAATTAGACAGGGGTGTCGTT
TCCTTCAGCAGCTCGTGCAGGATATGAACGCGCAGCTCACGACTTTCACC
TCCCTGGAACACTACGAGGTGGAGCTAGGGGGAAGCATTACCCCCATGAT
AGCAGACAAGTTCGAGGCCCTCGACGACGACTCGGCAGATCTGTTACAGG
GGTGTCGTTTCCTTCAGCAGCTCGTGCAGGATATGAACGCGCAGCTCACG
ACTTTCACCTCCCTGGAACACTACGAGGTGGAGCTAGGGGGAAGCATTAC
CCCCATGATAGCAGACAAGTTCGAGGCCCTCGACGACGACTCGGCAGATC
TGTTACAGAAATTTTTCGATCGCTACGGGAAAATGGTGCGATACAGCTGC
GCGCAGAGAGTGCGAGATATGGCGACGACTGGGGAAGGCTGTCCAAGTGG
GGCCCATTTGTTGGCTGATTCGGAGCCCCTCCAAATTTACGCTCTTCGCT
GGTTGATGGGTAGCCTGGGGGTAGGCTGCACGGTGGTGGAGATGGAGCAG
GCAGAAAAAGTTGAAGAGGGGTGTGCAGCTCTGCGTCGAGAATAAAAATT
TTTCGATCGCTACGGGAAAATGGTGCGATACAGCTGCGCGCAGAGAGTGC
GAGATATGGCGACGACTGGGGAAGGCTGTCCAAGTGGGGCCCATTTGTTG
GCTGATTCGGAGCCCCTCCAAATTTACGCTCTTCGCTGGTTGATGGGTAG
CCTGGGGGTAGGCTGCACGGTGGTGGAGATGGAGCAGGCAGAAAAAGTTG
AAGAGGGGTGTGCAGCTCTGCGTCGAGAATAA
back to top